histone lysine demethylation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04490 AT3G04490 AT3G04490 AT3G04490 |
| fragaria_vesca | FvH4_6g01900 FvH4_6g01900 FvH4_6g01900 FvH4_6g01900 FvH4_6g01900 FvH4_6g01900 FvH4_6g01900 FvH4_6g01900 |
| malus_domestica | MD04G1230100.v1.1 |
| prunus_persica | Prupe.7G018700_v2.0.a1 Prupe.7G018700_v2.0.a1 Prupe.7G018700_v2.0.a1 Prupe.7G018700_v2.0.a1 Prupe.7G018700_v2.0.a1 Prupe.7G018700_v2.0.a1 |
| pyrus_communis | pycom04g20400 |
| rosa_chinensis | RchiOBHm_Chr3g0449631 |
| rosa_laevigata | RLG00000025813 |
| rosa_multiflora | Rmu_sc0009629.1_g000015 |
| rosa_roxburghii | Rroxscaffold_6G00427530 |
| rosa_rugosa | Rorug02G0622600 |
| rosa_samantha | Rh3AG020400 Rh3BG021100 Rh3CG019600 Rh3DG020900 |
| rosa_wichuraiana | Rw3G001680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1790 |
| Acc36I | ACCTGC | 2 cut(s) | 2853, 3083 |
| Acc65I | GGTACC | 1 cut(s) | 673 |
| AccB1I | GGYRCC | 2 cut(s) | 673, 2780 |
| AccI | GTMKAC | 2 cut(s) | 2481, 3356 |
| AccII | CGCG | 2 cut(s) | 3307, 3341 |
| AclWI | GGATC | 5 cut(s) | 1055, 1613, 2049, 2277, 2703 |
| AcoI | YGGCCR | 1 cut(s) | 850 |
| AcsI | RAATTY | 9 cut(s) | 106, 173, 398, 515, 720, 734, 1725, 1976, 3115 |
| AcuI | CTGAAG | 3 cut(s) | 1460, 2591, 2691 |
| AcvI | CACGTG | 2 cut(s) | 1298, 1672 |
| AcyI | GRCGYC | 1 cut(s) | 2021 |
| AfeI | AGCGCT | 1 cut(s) | 1583 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1376, 1606, 3049, 3151, 3175 |
| AflII | CTTAAG | 1 cut(s) | 2516 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 973, 1005 |
| Alw21I | GWGCWC | 3 cut(s) | 78, 2707, 3031 |
| Alw26I | GTCTC | 4 cut(s) | 713, 1271, 2564, 2765 |
| AlwI | GGATC | 5 cut(s) | 1055, 1613, 2049, 2277, 2703 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2228, 3331 |
| Aor51HI | AGCGCT | 1 cut(s) | 1583 |
| AoxI | GGCC | 3 cut(s) | 850, 1196, 2974 |
| ApoI | RAATTY | 9 cut(s) | 106, 173, 398, 515, 720, 734, 1725, 1976, 3115 |
| AseI | ATTAAT | 1 cut(s) | 489 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 605 |
| Asp718I | GGTACC | 1 cut(s) | 673 |
| AspLEI | GCGC | 4 cut(s) | 703, 884, 1584, 3341 |
| AspS9I | GGNCC | 3 cut(s) | 818, 1197, 2842 |
| AsuHPI | GGTGA | 4 cut(s) | 321, 1540, 2099, 2180 |
| AsuII | TTCGAA | 1 cut(s) | 232 |
| AvaII | GGWCC | 2 cut(s) | 818, 2842 |
| AxyI | CCTNAGG | 3 cut(s) | 333, 678, 2565 |
| BaeGI | GKGCMC | 2 cut(s) | 1671, 2783 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2504, 2537 |
| BalI | TGGCCA | 1 cut(s) | 852 |
| BanI | GGYRCC | 2 cut(s) | 673, 2780 |
| BanII | GRGCYC | 3 cut(s) | 78, 3031, 3083 |
| BauI | CACGAG | 1 cut(s) | 2489 |
| BbrPI | CACGTG | 2 cut(s) | 1298, 1672 |
| BbsI | GAAGAC | 3 cut(s) | 539, 608, 2804 |
| Bbv12I | GWGCWC | 3 cut(s) | 78, 2707, 3031 |
| BbvCI | CCTCAGC | 1 cut(s) | 120 |
| BccI | CCATC | 8 cut(s) | 77, 532, 535, 1000, 1875, 2353, 2534, 3384 |
| BclI | TGATCA | 1 cut(s) | 288 |
| BcoDI | GTCTC | 4 cut(s) | 713, 1271, 2564, 2765 |
| BfaI | CTAG | 9 cut(s) | 552, 846, 1310, 1395, 1530, 2138, 2465, 2558, 2957 |
| BfmI | CTRYAG | 8 cut(s) | 50, 114, 219, 1777, 2045, 2496, 3090, 3158 |
| BfoI | RGCGCY | 2 cut(s) | 885, 1585 |
| BfrI | CTTAAG | 1 cut(s) | 2516 |
| BfuAI | ACCTGC | 2 cut(s) | 2853, 3083 |
| BglII | AGATCT | 1 cut(s) | 2740 |
| BlpI | GCTNAGC | 1 cut(s) | 1800 |
| Bme18I | GGWCC | 2 cut(s) | 818, 2842 |
| BmgT120I | GGNCC | 3 cut(s) | 818, 1197, 2842 |
| BmiI | GGNNCC | 5 cut(s) | 675, 982, 1871, 2782, 3143 |
| BmrI | ACTGGG | 1 cut(s) | 1674 |
| BmsI | GCATC | 8 cut(s) | 87, 616, 1060, 1104, 1451, 1838, 2258, 3202 |
| BmuI | ACTGGG | 1 cut(s) | 1674 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1125 |
| BpiI | GAAGAC | 3 cut(s) | 539, 608, 2804 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 650, 682, 1631, 1663 |
| BpmI | CTGGAG | 3 cut(s) | 780, 2396, 2495 |
| Bpu10I | CCTNAGC | 1 cut(s) | 120 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1800 |
| Bpu14I | TTCGAA | 1 cut(s) | 232 |
| BpuEI | CTTGAG | 3 cut(s) | 203, 889, 2987 |
| BsaAI | YACGTR | 4 cut(s) | 1298, 1672, 1893, 2702 |
| BsaHI | GRCGYC | 1 cut(s) | 2021 |
| BsaI | GGTCTC | 1 cut(s) | 2564 |
| BsaJI | CCNNGG | 8 cut(s) | 363, 1052, 1494, 1600, 2016, 2030, 2532, 3421 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1376, 1606, 3049, 3151, 3175 |
| Bse118I | RCCGGY | 1 cut(s) | 3138 |
| Bse1I | ACTGG | 2 cut(s) | 1337, 1669 |
| Bse21I | CCTNAGG | 3 cut(s) | 333, 678, 2565 |
| Bse3DI | GCAATG | 4 cut(s) | 568, 1143, 2331, 3320 |
| BseDI | CCNNGG | 8 cut(s) | 363, 1052, 1494, 1600, 2016, 2030, 2532, 3421 |
| BseGI | GGATG | 4 cut(s) | 1504, 1759, 1770, 2249 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1376, 1606, 3049, 3151, 3175 |
| BseMI | GCAATG | 4 cut(s) | 568, 1143, 2331, 3320 |
| BseNI | ACTGG | 2 cut(s) | 1337, 1669 |
| BseRI | GAGGAG | 2 cut(s) | 1652, 2817 |
| BseSI | GKGCMC | 2 cut(s) | 1671, 2783 |
| BseYI | CCCAGC | 2 cut(s) | 615, 1287 |
| BsgI | GTGCAG | 5 cut(s) | 67, 494, 830, 2105, 3225 |
| Bsh1236I | CGCG | 2 cut(s) | 3307, 3341 |
| BshFI | GGCC | 3 cut(s) | 852, 1198, 2976 |
| BshNI | GGYRCC | 2 cut(s) | 673, 2780 |
| BsiHKAI | GWGCWC | 3 cut(s) | 78, 2707, 3031 |
| BsiSI | CCGG | 2 cut(s) | 574, 3139 |
| BslFI | GGGAC | 1 cut(s) | 127 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1376, 1606, 3049, 3151, 3175 |
| BsmAI | GTCTC | 4 cut(s) | 713, 1271, 2564, 2765 |
| BsmBI | CGTCTC | 1 cut(s) | 713 |
| BsmFI | GGGAC | 1 cut(s) | 127 |
| BsmI | GAATGC | 3 cut(s) | 456, 1363, 3295 |
| BsnI | GGCC | 3 cut(s) | 852, 1198, 2976 |
| Bso31I | GGTCTC | 1 cut(s) | 2564 |
| Bsp119I | TTCGAA | 1 cut(s) | 232 |
| Bsp1286I | GDGCHC | 6 cut(s) | 78, 1671, 2707, 2783, 3031, 3083 |
| Bsp1407I | TGTACA | 3 cut(s) | 958, 1003, 1414 |
| Bsp143I | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1800 |
| Bsp19I | CCATGG | 1 cut(s) | 1052 |
| BspANI | GGCC | 3 cut(s) | 852, 1198, 2976 |
| BspFNI | CGCG | 2 cut(s) | 3307, 3341 |
| BspHI | TCATGA | 3 cut(s) | 562, 1254, 2274 |
| BspLI | GGNNCC | 5 cut(s) | 675, 982, 1871, 2782, 3143 |
| BspMAI | CTGCAG | 7 cut(s) | 54, 118, 223, 2049, 2500, 3094, 3162 |
| BspMI | ACCTGC | 2 cut(s) | 2853, 3083 |
| BspPI | GGATC | 5 cut(s) | 1055, 1613, 2049, 2277, 2703 |
| BspQI | GCTCTTC | 2 cut(s) | 2712, 3222 |
| BspT104I | TTCGAA | 1 cut(s) | 232 |
| BspT107I | GGYRCC | 2 cut(s) | 673, 2780 |
| BspTI | CTTAAG | 1 cut(s) | 2516 |
| BspTNI | GGTCTC | 1 cut(s) | 2564 |
| BsrDI | GCAATG | 4 cut(s) | 568, 1143, 2331, 3320 |
| BsrFI | RCCGGY | 1 cut(s) | 3138 |
| BsrGI | TGTACA | 3 cut(s) | 958, 1003, 1414 |
| BsrI | ACTGG | 2 cut(s) | 1337, 1669 |
| BssAI | RCCGGY | 1 cut(s) | 3138 |
| BssECI | CCNNGG | 8 cut(s) | 363, 1052, 1494, 1600, 2016, 2030, 2532, 3421 |
| BssMI | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| BssNI | GRCGYC | 1 cut(s) | 2021 |
| BssSI | CACGAG | 1 cut(s) | 2489 |
| BssT1I | CCWWGG | 2 cut(s) | 1052, 2016 |
| Bst2BI | CACGAG | 1 cut(s) | 2489 |
| Bst4CI | ACNGT | 7 cut(s) | 963, 1124, 1153, 1182, 2581, 2920, 3404 |
| Bst6I | CTCTTC | 3 cut(s) | 1269, 2712, 3222 |
| BstACI | GRCGYC | 1 cut(s) | 2021 |
| BstAFI | CTTAAG | 1 cut(s) | 2516 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 626, 3212 |
| BstAUI | TGTACA | 3 cut(s) | 958, 1003, 1414 |
| BstBAI | YACGTR | 4 cut(s) | 1298, 1672, 1893, 2702 |
| BstBI | TTCGAA | 1 cut(s) | 232 |
| BstC8I | GCNNGC | 8 cut(s) | 78, 82, 392, 2049, 2202, 3064, 3285, 3295 |
| BstDSI | CCRYGG | 2 cut(s) | 363, 1052 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3173 |
| BstF5I | GGATG | 4 cut(s) | 1504, 1759, 1770, 2249 |
| BstFNI | CGCG | 2 cut(s) | 3307, 3341 |
| BstH2I | RGCGCY | 2 cut(s) | 885, 1585 |
| BstHHI | GCGC | 4 cut(s) | 703, 884, 1584, 3341 |
| BstKTI | GATC | 9 cut(s) | 291, 1063, 1621, 1677, 2044, 2272, 2698, 2743, 3367 |
| BstMAI | GTCTC | 4 cut(s) | 713, 1271, 2564, 2765 |
| BstMBI | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| BstNSI | RCATGY | 3 cut(s) | 171, 323, 3089 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1125 |
| BstSFI | CTRYAG | 8 cut(s) | 50, 114, 219, 1777, 2045, 2496, 3090, 3158 |
| BstSLI | GKGCMC | 2 cut(s) | 1671, 2783 |
| BstSNI | TACGTA | 1 cut(s) | 1893 |
| BstUI | CGCG | 2 cut(s) | 3307, 3341 |
| BstV2I | GAAGAC | 3 cut(s) | 539, 608, 2804 |
| BstX2I | RGATCY | 4 cut(s) | 2041, 2269, 2695, 2740 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2743 |
| BstYI | RGATCY | 4 cut(s) | 2041, 2269, 2695, 2740 |
| Bsu36I | CCTNAGG | 3 cut(s) | 333, 678, 2565 |
| BsuRI | GGCC | 3 cut(s) | 852, 1198, 2976 |
| BtgI | CCRYGG | 2 cut(s) | 363, 1052 |
| BtsCI | GGATG | 4 cut(s) | 1504, 1759, 1770, 2249 |
| BtsI | GCAGTG | 3 cut(s) | 781, 1389, 3271 |
| BtsIMutI | CAGTG | 4 cut(s) | 781, 1389, 1662, 3271 |
| BveI | ACCTGC | 2 cut(s) | 2853, 3083 |
| Cac8I | GCNNGC | 8 cut(s) | 78, 82, 392, 2049, 2202, 3064, 3285, 3295 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2228, 3331 |
| CciI | TCATGA | 3 cut(s) | 562, 1254, 2274 |
| CfoI | GCGC | 4 cut(s) | 703, 884, 1584, 3341 |
| Cfr10I | RCCGGY | 1 cut(s) | 3138 |
| Cfr13I | GGNCC | 3 cut(s) | 818, 1197, 2842 |
| CseI | GACGC | 3 cut(s) | 695, 2010, 3317 |
| CsiI | ACCWGGT | 1 cut(s) | 3192 |
| DpnI | GATC | 9 cut(s) | 290, 1062, 1620, 1676, 2043, 2271, 2697, 2742, 3366 |
| DpnII | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| DraI | TTTAAA | 1 cut(s) | 1453 |
| EaeI | YGGCCR | 1 cut(s) | 850 |
| Eam1104I | CTCTTC | 3 cut(s) | 1269, 2712, 3222 |
| EarI | CTCTTC | 3 cut(s) | 1269, 2712, 3222 |
| EciI | GGCGGA | 1 cut(s) | 50 |
| Ecl136II | GAGCTC | 2 cut(s) | 76, 3029 |
| Eco105I | TACGTA | 1 cut(s) | 1893 |
| Eco130I | CCWWGG | 2 cut(s) | 1052, 2016 |
| Eco24I | GRGCYC | 3 cut(s) | 78, 3031, 3083 |
| Eco31I | GGTCTC | 1 cut(s) | 2564 |
| Eco32I | GATATC | 1 cut(s) | 2640 |
| Eco47I | GGWCC | 2 cut(s) | 818, 2842 |
| Eco47III | AGCGCT | 1 cut(s) | 1583 |
| Eco53kI | GAGCTC | 2 cut(s) | 76, 3029 |
| Eco57I | CTGAAG | 3 cut(s) | 1460, 2591, 2691 |
| Eco72I | CACGTG | 2 cut(s) | 1298, 1672 |
| Eco81I | CCTNAGG | 3 cut(s) | 333, 678, 2565 |
| EcoICRI | GAGCTC | 2 cut(s) | 76, 3029 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3173 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1197 |
| EcoRI | GAATTC | 2 cut(s) | 106, 734 |
| EcoRV | GATATC | 1 cut(s) | 2640 |
| EcoT14I | CCWWGG | 2 cut(s) | 1052, 2016 |
| EcoT22I | ATGCAT | 4 cut(s) | 6, 102, 1363, 3322 |
| EcoT38I | GRGCYC | 3 cut(s) | 78, 3031, 3083 |
| ErhI | CCWWGG | 2 cut(s) | 1052, 2016 |
| Esp3I | CGTCTC | 1 cut(s) | 713 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1870, 1902 |
| FaqI | GGGAC | 1 cut(s) | 127 |
| FauNDI | CATATG | 3 cut(s) | 102, 1516, 2283 |
| FbaI | TGATCA | 1 cut(s) | 288 |
| FblI | GTMKAC | 2 cut(s) | 2481, 3356 |
| FokI | GGATG | 4 cut(s) | 1511, 1746, 1757, 2236 |
| FriOI | GRGCYC | 3 cut(s) | 78, 3031, 3083 |
| FspBI | CTAG | 9 cut(s) | 552, 846, 1310, 1395, 1530, 2138, 2465, 2558, 2957 |
| GlaI | GCGC | 4 cut(s) | 702, 883, 1583, 3340 |
| GsaI | CCCAGC | 2 cut(s) | 619, 1291 |
| GsuI | CTGGAG | 3 cut(s) | 780, 2396, 2495 |
| HaeII | RGCGCY | 2 cut(s) | 885, 1585 |
| HaeIII | GGCC | 3 cut(s) | 852, 1198, 2976 |
| HapII | CCGG | 2 cut(s) | 574, 3139 |
| HgaI | GACGC | 3 cut(s) | 695, 2010, 3317 |
| HhaI | GCGC | 4 cut(s) | 703, 884, 1584, 3341 |
| Hin1I | GRCGYC | 1 cut(s) | 2021 |
| Hin6I | GCGC | 4 cut(s) | 701, 882, 1582, 3339 |
| HinP1I | GCGC | 4 cut(s) | 701, 882, 1582, 3339 |
| HincII | GTYRAC | 2 cut(s) | 1246, 2587 |
| HindII | GTYRAC | 2 cut(s) | 1246, 2587 |
| HindIII | AAGCTT | 2 cut(s) | 2145, 3295 |
| HpaI | GTTAAC | 2 cut(s) | 1246, 2587 |
| HpaII | CCGG | 2 cut(s) | 574, 3139 |
| HphI | GGTGA | 4 cut(s) | 321, 1540, 2099, 2180 |
| Hpy99I | CGWCG | 1 cut(s) | 1124 |
| HpyCH4III | ACNGT | 7 cut(s) | 963, 1124, 1153, 1182, 2581, 2920, 3404 |
| HpyCH4IV | ACGT | 5 cut(s) | 1297, 1671, 1892, 1938, 2701 |
| HpySE526I | ACGT | 5 cut(s) | 1297, 1671, 1892, 1938, 2701 |
| Hsp92I | GRCGYC | 1 cut(s) | 2021 |
| HspAI | GCGC | 4 cut(s) | 701, 882, 1582, 3339 |
| KpnI | GGTACC | 1 cut(s) | 677 |
| Ksp22I | TGATCA | 1 cut(s) | 288 |
| KspAI | GTTAAC | 2 cut(s) | 1246, 2587 |
| Kzo9I | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| LguI | GCTCTTC | 2 cut(s) | 2712, 3222 |
| LmnI | GCTCC | 4 cut(s) | 974, 1284, 1639, 3171 |
| LweI | GCATC | 8 cut(s) | 87, 616, 1060, 1104, 1451, 1838, 2258, 3202 |
| MabI | ACCWGGT | 1 cut(s) | 3192 |
| MaeI | CTAG | 9 cut(s) | 552, 846, 1310, 1395, 1530, 2138, 2465, 2558, 2957 |
| MaeII | ACGT | 5 cut(s) | 1297, 1671, 1892, 1938, 2701 |
| MaeIII | GTNAC | 9 cut(s) | 640, 800, 1153, 1298, 1546, 1653, 2132, 2821, 2889 |
| MalI | GATC | 9 cut(s) | 290, 1062, 1620, 1676, 2043, 2271, 2697, 2742, 3366 |
| MboI | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| MboII | GAAGA | 9 cut(s) | 351, 539, 613, 1286, 2462, 2699, 2804, 3209, 3212 |
| MfeI | CAATTG | 3 cut(s) | 374, 1539, 2927 |
| MflI | RGATCY | 4 cut(s) | 2041, 2269, 2695, 2740 |
| MhlI | GDGCHC | 6 cut(s) | 78, 1671, 2707, 2783, 3031, 3083 |
| MlsI | TGGCCA | 1 cut(s) | 852 |
| MluNI | TGGCCA | 1 cut(s) | 852 |
| MlyI | GAGTC | 6 cut(s) | 659, 668, 771, 1457, 2287, 2501 |
| MmeI | TCCRAC | 3 cut(s) | 1491, 1646, 2737 |
| Mox20I | TGGCCA | 1 cut(s) | 852 |
| Mph1103I | ATGCAT | 4 cut(s) | 6, 102, 1363, 3322 |
| MroXI | GAANNNNTTC | 1 cut(s) | 605 |
| MscI | TGGCCA | 1 cut(s) | 852 |
| MslI | CAYNNNNRTG | 2 cut(s) | 95, 2100 |
| Msp20I | TGGCCA | 1 cut(s) | 852 |
| MspA1I | CMGCKG | 5 cut(s) | 49, 119, 758, 1705, 3201 |
| MspCI | CTTAAG | 1 cut(s) | 2516 |
| MspI | CCGG | 2 cut(s) | 574, 3139 |
| MunI | CAATTG | 3 cut(s) | 374, 1539, 2927 |
| Mva1269I | GAATGC | 3 cut(s) | 456, 1363, 3295 |
| MvnI | CGCG | 2 cut(s) | 3307, 3341 |
| NcoI | CCATGG | 1 cut(s) | 1052 |
| NdeI | CATATG | 3 cut(s) | 102, 1516, 2283 |
| NdeII | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| NlaIV | GGNNCC | 5 cut(s) | 675, 982, 1871, 2782, 3143 |
| NmuCI | GTSAC | 5 cut(s) | 640, 1298, 1546, 2132, 2889 |
| NsiI | ATGCAT | 4 cut(s) | 6, 102, 1363, 3322 |
| NspI | RCATGY | 3 cut(s) | 171, 323, 3089 |
| NspV | TTCGAA | 1 cut(s) | 232 |
| PagI | TCATGA | 3 cut(s) | 562, 1254, 2274 |
| PciSI | GCTCTTC | 2 cut(s) | 2712, 3222 |
| PctI | GAATGC | 3 cut(s) | 456, 1363, 3295 |
| PdmI | GAANNNNTTC | 1 cut(s) | 605 |
| PfeI | GAWTC | 8 cut(s) | 500, 779, 1708, 2123, 2442, 2455, 2762, 3104 |
| PflFI | GACNNNGTC | 1 cut(s) | 3194 |
| PleI | GAGTC | 6 cut(s) | 659, 667, 770, 1457, 2286, 2500 |
| PmaCI | CACGTG | 2 cut(s) | 1298, 1672 |
| PmlI | CACGTG | 2 cut(s) | 1298, 1672 |
| PpsI | GAGTC | 6 cut(s) | 659, 667, 770, 1457, 2286, 2500 |
| Ppu21I | YACGTR | 4 cut(s) | 1298, 1672, 1893, 2702 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1125 |
| PshBI | ATTAAT | 1 cut(s) | 489 |
| PsiI | TTATAA | 1 cut(s) | 1790 |
| Psp124BI | GAGCTC | 2 cut(s) | 78, 3031 |
| PspCI | CACGTG | 2 cut(s) | 1298, 1672 |
| PspFI | CCCAGC | 2 cut(s) | 615, 1287 |
| PspN4I | GGNNCC | 5 cut(s) | 675, 982, 1871, 2782, 3143 |
| PspPI | GGNCC | 3 cut(s) | 818, 1197, 2842 |
| PstI | CTGCAG | 7 cut(s) | 54, 118, 223, 2049, 2500, 3094, 3162 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2228, 3331 |
| PsuI | RGATCY | 4 cut(s) | 2041, 2269, 2695, 2740 |
| PsyI | GACNNNGTC | 1 cut(s) | 3194 |
| PvuII | CAGCTG | 2 cut(s) | 49, 119 |
| RseI | CAYNNNNRTG | 2 cut(s) | 95, 2100 |
| SacI | GAGCTC | 2 cut(s) | 78, 3031 |
| SapI | GCTCTTC | 2 cut(s) | 2712, 3222 |
| Sau3AI | GATC | 9 cut(s) | 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364 |
| Sau96I | GGNCC | 3 cut(s) | 818, 1197, 2842 |
| SchI | GAGTC | 6 cut(s) | 659, 668, 771, 1457, 2287, 2501 |
| SduI | GDGCHC | 6 cut(s) | 78, 1671, 2707, 2783, 3031, 3083 |
| SexAI | ACCWGGT | 1 cut(s) | 3192 |
| SfaNI | GCATC | 8 cut(s) | 87, 616, 1060, 1104, 1451, 1838, 2258, 3202 |
| SfcI | CTRYAG | 8 cut(s) | 50, 114, 219, 1777, 2045, 2496, 3090, 3158 |
| SfuI | TTCGAA | 1 cut(s) | 232 |
| SinI | GGWCC | 2 cut(s) | 818, 2842 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 95, 2100 |
| SmlI | CTYRAG | 4 cut(s) | 182, 868, 2516, 2966 |
| SmoI | CTYRAG | 4 cut(s) | 182, 868, 2516, 2966 |
| SnaBI | TACGTA | 1 cut(s) | 1893 |
| SspI | AATATT | 1 cut(s) | 2629 |
| SspMI | CTAG | 9 cut(s) | 552, 846, 1310, 1395, 1530, 2138, 2465, 2558, 2957 |
| SstI | GAGCTC | 2 cut(s) | 78, 3031 |
| StyI | CCWWGG | 2 cut(s) | 1052, 2016 |
| TaaI | ACNGT | 7 cut(s) | 963, 1124, 1153, 1182, 2581, 2920, 3404 |
| TaiI | ACGT | 5 cut(s) | 1300, 1674, 1895, 1941, 2704 |
| TaqI | TCGA | 5 cut(s) | 72, 232, 498, 1119, 1846 |
| TatI | WGTACW | 7 cut(s) | 692, 740, 958, 1003, 1414, 2688, 2953 |
| TauI | GCSGC | 3 cut(s) | 35, 758, 3310 |
| TfiI | GAWTC | 8 cut(s) | 500, 779, 1708, 2123, 2442, 2455, 2762, 3104 |
| TscAI | CASTG | 4 cut(s) | 781, 1396, 1669, 3271 |
| TseFI | GTSAC | 5 cut(s) | 640, 1298, 1546, 2132, 2889 |
| Tsp45I | GTSAC | 5 cut(s) | 640, 1298, 1546, 2132, 2889 |
| TspGWI | ACGGA | 1 cut(s) | 352 |
| TspRI | CASTG | 4 cut(s) | 781, 1396, 1669, 3271 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3194 |
| Vha464I | CTTAAG | 1 cut(s) | 2516 |
| VpaK11BI | GGWCC | 2 cut(s) | 818, 2842 |
| VspI | ATTAAT | 1 cut(s) | 489 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3173 |
| XapI | RAATTY | 9 cut(s) | 106, 173, 398, 515, 720, 734, 1725, 1976, 3115 |
| XbaI | TCTAGA | 1 cut(s) | 2557 |
| XceI | RCATGY | 3 cut(s) | 171, 323, 3089 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 449, 1492 |
| XmiI | GTMKAC | 2 cut(s) | 2481, 3356 |
| XmnI | GAANNNNTTC | 1 cut(s) | 605 |
| XspI | CTAG | 9 cut(s) | 552, 846, 1310, 1395, 1530, 2138, 2465, 2558, 2957 |
| Zsp2I | ATGCAT | 4 cut(s) | 6, 102, 1363, 3322 |