Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
3888362 .. 3890794
FvH4_6g06640.t1
Length: 294 bp
ATGTCGGAATCCAAGACCAAAATCGAATCCCTAAGGGAATGGATGGTCGAGCATAAGCTCCGTGCTGTTGGGGCTGTGTGGCTTACTGGAATAGTCGGGTCAATAGCTTACCAATGGTCAAGTCCCAAGAAATTTCAAGTGAAGGTGATTCATTCCAGGTTGAATGCACAGGCTATCACACTGGCTGCCTTATTTGGTAGTGCTGTTGTTGAATACTATGACCATAACACTGGTAAAAAGGCAGACAAGTATGCCAAGTACATGCACATTGAGAACTTCCAGAACAAGGATTAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
9.52
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| HIG_1_N |
PF04588 |
17 - 66 |
4.3e-09 |
Hypoxia induced protein conserved region |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0017093)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AcsI |
RAATTY |
1 cut(s)
|
131 |
| AfaI |
GTAC |
1 cut(s)
|
260 |
| AfiI |
CCNNNNNNNGG |
1 cut(s)
|
286 |
| AgsI |
TTSAA |
3 cut(s)
|
137, 163, 212 |
| AjnI |
CCWGG |
1 cut(s)
|
155 |
| AluBI |
AGCT |
2 cut(s)
|
58, 107 |
| AluI |
AGCT |
2 cut(s)
|
58, 107 |
| ApeKI |
GCWGC |
1 cut(s)
|
185 |
| ApoI |
RAATTY |
1 cut(s)
|
131 |
| AsuHPI |
GGTGA |
1 cut(s)
|
157 |
| AxyI |
CCTNAGG |
1 cut(s)
|
32 |
| BbvI |
GCAGC |
1 cut(s)
|
172 |
| BccI |
CCATC |
1 cut(s)
|
37 |
| BciT130I |
CCWGG |
1 cut(s)
|
157 |
| BisI |
GCNGC |
1 cut(s)
|
186 |
| BlsI |
GCNGC |
1 cut(s)
|
187 |
| Bme1390I |
CCNGG |
1 cut(s)
|
157 |
| BmrFI |
CCNGG |
1 cut(s)
|
157 |
| Bsc4I |
CCNNNNNNNGG |
1 cut(s)
|
286 |
| Bse1I |
ACTGG |
3 cut(s)
|
91, 186, 235 |
| Bse21I |
CCTNAGG |
1 cut(s)
|
32 |
| BseBI |
CCWGG |
1 cut(s)
|
157 |
| BseGI |
GGATG |
1 cut(s)
|
48 |
| BseLI |
CCNNNNNNNGG |
1 cut(s)
|
286 |
| BseNI |
ACTGG |
3 cut(s)
|
91, 186, 235 |
| BseXI |
GCAGC |
1 cut(s)
|
172 |
| BslFI |
GGGAC |
1 cut(s)
|
108 |
| BslI |
CCNNNNNNNGG |
1 cut(s)
|
286 |
| BsmFI |
GGGAC |
1 cut(s)
|
108 |
| BsmI |
GAATGC |
1 cut(s)
|
169 |
| BsrI |
ACTGG |
3 cut(s)
|
91, 186, 235 |
| Bst2UI |
CCWGG |
1 cut(s)
|
157 |
| BstDEI |
CTNAG |
1 cut(s)
|
32 |
| BstF5I |
GGATG |
1 cut(s)
|
48 |
| BstMWI |
GCNNNNNNNGC |
1 cut(s)
|
71 |
| BstNI |
CCWGG |
1 cut(s)
|
157 |
| BstNSI |
RCATGY |
1 cut(s)
|
265 |
| BstSCI |
CCNGG |
1 cut(s)
|
155 |
| BstV1I |
GCAGC |
1 cut(s)
|
172 |
| BstXI |
CCANNNNNNTGG |
1 cut(s)
|
230 |
| Bsu36I |
CCTNAGG |
1 cut(s)
|
32 |
| BtsCI |
GGATG |
1 cut(s)
|
48 |
| BtsIMutI |
CAGTG |
2 cut(s)
|
179, 228 |
| Csp6I |
GTAC |
1 cut(s)
|
259 |
| CviAII |
CATG |
1 cut(s)
|
262 |
| CviJI |
RGCY |
6 cut(s)
|
58, 74, 82, 107, 173, 185 |
| CviKI_1 |
RGCY |
6 cut(s)
|
58, 74, 82, 107, 173, 185 |
| CviQI |
GTAC |
1 cut(s)
|
259 |
| DdeI |
CTNAG |
1 cut(s)
|
32 |
| Eco81I |
CCTNAGG |
1 cut(s)
|
32 |
| EcoRII |
CCWGG |
1 cut(s)
|
155 |
| FaeI |
CATG |
1 cut(s)
|
265 |
| FaiI |
YATR |
5 cut(s)
|
54, 219, 225, 252, 263 |
| FaqI |
GGGAC |
1 cut(s)
|
108 |
| FatI |
CATG |
1 cut(s)
|
261 |
| Fnu4HI |
GCNGC |
1 cut(s)
|
186 |
| FokI |
GGATG |
1 cut(s)
|
55 |
| Fsp4HI |
GCNGC |
1 cut(s)
|
186 |
| GluI |
GCNGC |
1 cut(s)
|
186 |
| Hin1II |
CATG |
1 cut(s)
|
265 |
| HinfI |
GANTC |
3 cut(s)
|
8, 26, 148 |
| HphI |
GGTGA |
1 cut(s)
|
157 |
| Hpy188I |
TCNGA |
1 cut(s)
|
7 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
280 |
| HpyAV |
CCTTC |
1 cut(s)
|
136 |
| HpyCH4V |
TGCA |
2 cut(s)
|
167, 265 |
| HpyF10VI |
GCNNNNNNNGC |
1 cut(s)
|
71 |
| HpyF3I |
CTNAG |
1 cut(s)
|
32 |
| Hsp92II |
CATG |
1 cut(s)
|
265 |
| LmnI |
GCTCC |
1 cut(s)
|
63 |
| LpnPI |
CCDG |
6 cut(s)
|
72, 142, 155, 167, 169, 216 |
| Lsp1109I |
GCAGC |
1 cut(s)
|
172 |
| MluCI |
AATT |
1 cut(s)
|
131 |
| MseI |
TTAA |
1 cut(s)
|
292 |
| MspR9I |
CCNGG |
1 cut(s)
|
157 |
| Mva1269I |
GAATGC |
1 cut(s)
|
169 |
| MvaI |
CCWGG |
1 cut(s)
|
157 |
| MwoI |
GCNNNNNNNGC |
1 cut(s)
|
71 |
| NlaIII |
CATG |
1 cut(s)
|
265 |
| NspI |
RCATGY |
1 cut(s)
|
265 |
| PctI |
GAATGC |
1 cut(s)
|
169 |
| PfeI |
GAWTC |
3 cut(s)
|
8, 26, 148 |
| PkrI |
GCNGC |
1 cut(s)
|
187 |
| Psp6I |
CCWGG |
1 cut(s)
|
155 |
| PspGI |
CCWGG |
1 cut(s)
|
155 |
| RsaI |
GTAC |
1 cut(s)
|
260 |
| RsaNI |
GTAC |
1 cut(s)
|
259 |
| SaqAI |
TTAA |
1 cut(s)
|
292 |
| SatI |
GCNGC |
1 cut(s)
|
186 |
| ScrFI |
CCNGG |
1 cut(s)
|
157 |
| SetI |
ASST |
4 cut(s)
|
60, 109, 147, 161 |
| Sse9I |
AATT |
1 cut(s)
|
131 |
| StyD4I |
CCNGG |
1 cut(s)
|
155 |
| TaqI |
TCGA |
2 cut(s)
|
24, 48 |
| TasI |
AATT |
1 cut(s)
|
131 |
| TatI |
WGTACW |
1 cut(s)
|
258 |
| TfiI |
GAWTC |
3 cut(s)
|
8, 26, 148 |
| Tru1I |
TTAA |
1 cut(s)
|
292 |
| Tru9I |
TTAA |
1 cut(s)
|
292 |
| TscAI |
CASTG |
2 cut(s)
|
186, 235 |
| TseI |
GCWGC |
1 cut(s)
|
185 |
| TspDTI |
ATGAA |
1 cut(s)
|
140 |
| TspGWI |
ACGGA |
1 cut(s)
|
50 |
| TspRI |
CASTG |
2 cut(s)
|
186, 235 |
| XapI |
RAATTY |
1 cut(s)
|
131 |
| XceI |
RCATGY |
1 cut(s)
|
265 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.