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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g08611 |
| malus_domestica | MD04G1185000.v1.1 MD12G1198800.v1.1 |
| prunus_persica | Prupe.6G303400_v2.0.a1 |
| pyrus_communis | pycom12g18520 |
| rosa_chinensis | RchiOBHm_Chr3g0458711 |
| rosa_laevigata | RLG00000025140 |
| rosa_multiflora | Rmu_sc0001634.1_g000013 |
| rosa_roxburghii | Rroxscaffold_6G00420850 |
| rosa_rugosa | Rorug03G0031400 |
| rosa_samantha | Rh3AG089000 Rh3BG091800 Rh3CG092200 Rh3DG092800 |
| rosa_wichuraiana | Rw3G007610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2442 |
| AccBSI | CCGCTC | 1 cut(s) | 126 |
| AciI | CCGC | 1 cut(s) | 126 |
| AclWI | GGATC | 3 cut(s) | 410, 421, 1932 |
| AcuI | CTGAAG | 5 cut(s) | 708, 957, 1725, 2055, 2142 |
| AcyI | GRCGYC | 1 cut(s) | 1104 |
| AdeI | CACNNNGTG | 1 cut(s) | 872 |
| AfaI | GTAC | 3 cut(s) | 27, 663, 2218 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 436, 835, 1010, 1138 |
| AflII | CTTAAG | 1 cut(s) | 1070 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 604 |
| AjnI | CCWGG | 1 cut(s) | 703 |
| Alw21I | GWGCWC | 1 cut(s) | 2426 |
| Alw26I | GTCTC | 7 cut(s) | 244, 257, 346, 731, 1364, 1802, 2201 |
| AlwI | GGATC | 3 cut(s) | 410, 421, 1932 |
| ApeKI | GCWGC | 6 cut(s) | 335, 680, 683, 806, 1184, 1661 |
| AspS9I | GGNCC | 1 cut(s) | 1129 |
| AsuC2I | CCSGG | 2 cut(s) | 431, 2533 |
| AsuHPI | GGTGA | 2 cut(s) | 2339, 2420 |
| AsuNHI | GCTAGC | 1 cut(s) | 1966 |
| AvaII | GGWCC | 1 cut(s) | 1129 |
| BanII | GRGCYC | 1 cut(s) | 2426 |
| BbsI | GAAGAC | 3 cut(s) | 963, 2043, 2436 |
| Bbv12I | GWGCWC | 1 cut(s) | 2426 |
| BbvI | GCAGC | 6 cut(s) | 322, 667, 670, 818, 1196, 1673 |
| BccI | CCATC | 5 cut(s) | 788, 1703, 2125, 2314, 2399 |
| BciT130I | CCWGG | 1 cut(s) | 705 |
| BciVI | GTATCC | 1 cut(s) | 1726 |
| BcnI | CCSGG | 2 cut(s) | 431, 2533 |
| BcoDI | GTCTC | 7 cut(s) | 244, 257, 346, 731, 1364, 1802, 2201 |
| BfaI | CTAG | 5 cut(s) | 164, 257, 870, 1038, 1967 |
| BfmI | CTRYAG | 2 cut(s) | 489, 804 |
| BfrI | CTTAAG | 1 cut(s) | 1070 |
| BfuAI | ACCTGC | 1 cut(s) | 2442 |
| BfuI | GTATCC | 1 cut(s) | 1726 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1112 |
| BisI | GCNGC | 6 cut(s) | 336, 681, 684, 807, 1185, 1662 |
| BlsI | GCNGC | 6 cut(s) | 337, 682, 685, 808, 1186, 1663 |
| Bme1390I | CCNGG | 3 cut(s) | 431, 705, 2533 |
| Bme18I | GGWCC | 1 cut(s) | 1129 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 604 |
| BmgT120I | GGNCC | 1 cut(s) | 1129 |
| BmiI | GGNNCC | 2 cut(s) | 36, 579 |
| BmrFI | CCNGG | 3 cut(s) | 431, 705, 2533 |
| BmsI | GCATC | 5 cut(s) | 220, 526, 1340, 1768, 1966 |
| BmtI | GCTAGC | 1 cut(s) | 1970 |
| BpiI | GAAGAC | 3 cut(s) | 963, 2043, 2436 |
| BpmI | CTGGAG | 3 cut(s) | 668, 962, 1562 |
| BpuEI | CTTGAG | 5 cut(s) | 226, 711, 767, 782, 2081 |
| BpuMI | CCSGG | 2 cut(s) | 431, 2533 |
| BsaHI | GRCGYC | 1 cut(s) | 1104 |
| BsaJI | CCNNGG | 1 cut(s) | 2571 |
| BsaWI | WCCGGW | 1 cut(s) | 31 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 436, 835, 1010, 1138 |
| Bse1I | ACTGG | 3 cut(s) | 23, 251, 651 |
| Bse3DI | GCAATG | 2 cut(s) | 581, 588 |
| BseBI | CCWGG | 1 cut(s) | 705 |
| BseDI | CCNNGG | 1 cut(s) | 2571 |
| BseGI | GGATG | 7 cut(s) | 784, 952, 1762, 2266, 2368, 2410, 2581 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 436, 835, 1010, 1138 |
| BseMI | GCAATG | 2 cut(s) | 581, 588 |
| BseNI | ACTGG | 3 cut(s) | 23, 251, 651 |
| BseRI | GAGGAG | 5 cut(s) | 531, 764, 1022, 1224, 2078 |
| BseXI | GCAGC | 6 cut(s) | 322, 667, 670, 818, 1196, 1673 |
| BseYI | CCCAGC | 1 cut(s) | 2150 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2426 |
| BsiSI | CCGG | 3 cut(s) | 32, 431, 2532 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 436, 835, 1010, 1138 |
| BsmAI | GTCTC | 7 cut(s) | 244, 257, 346, 731, 1364, 1802, 2201 |
| BsmI | GAATGC | 1 cut(s) | 331 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2426 |
| Bsp143I | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| BspACI | CCGC | 1 cut(s) | 126 |
| BspHI | TCATGA | 1 cut(s) | 184 |
| BspLI | GGNNCC | 2 cut(s) | 36, 579 |
| BspMAI | CTGCAG | 1 cut(s) | 808 |
| BspMI | ACCTGC | 1 cut(s) | 2442 |
| BspOI | GCTAGC | 1 cut(s) | 1970 |
| BspPI | GGATC | 3 cut(s) | 410, 421, 1932 |
| BspTI | CTTAAG | 1 cut(s) | 1070 |
| BsrBI | CCGCTC | 1 cut(s) | 126 |
| BsrDI | GCAATG | 2 cut(s) | 581, 588 |
| BsrI | ACTGG | 3 cut(s) | 23, 251, 651 |
| BssECI | CCNNGG | 1 cut(s) | 2571 |
| BssMI | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| BssNI | GRCGYC | 1 cut(s) | 1104 |
| BssT1I | CCWWGG | 1 cut(s) | 2571 |
| Bst2UI | CCWGG | 1 cut(s) | 705 |
| Bst4CI | ACNGT | 5 cut(s) | 16, 619, 787, 1516, 2042 |
| BstACI | GRCGYC | 1 cut(s) | 1104 |
| BstAFI | CTTAAG | 1 cut(s) | 1070 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1976 |
| BstC8I | GCNNGC | 2 cut(s) | 1485, 1968 |
| BstF5I | GGATG | 7 cut(s) | 784, 952, 1762, 2266, 2368, 2410, 2581 |
| BstKTI | GATC | 7 cut(s) | 184, 195, 418, 429, 1197, 1927, 2380 |
| BstMAI | GTCTC | 7 cut(s) | 244, 257, 346, 731, 1364, 1802, 2201 |
| BstMBI | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 335, 709, 1112, 1328, 1976, 2311 |
| BstNI | CCWGG | 1 cut(s) | 705 |
| BstSCI | CCNGG | 3 cut(s) | 429, 703, 2531 |
| BstSFI | CTRYAG | 2 cut(s) | 489, 804 |
| BstV1I | GCAGC | 6 cut(s) | 322, 667, 670, 818, 1196, 1673 |
| BstV2I | GAAGAC | 3 cut(s) | 963, 2043, 2436 |
| BstX2I | RGATCY | 1 cut(s) | 426 |
| BstYI | RGATCY | 1 cut(s) | 426 |
| BsuI | GTATCC | 1 cut(s) | 1726 |
| BtsCI | GGATG | 7 cut(s) | 784, 952, 1762, 2266, 2368, 2410, 2581 |
| BtsI | GCAGTG | 2 cut(s) | 1194, 1671 |
| BtsIMutI | CAGTG | 4 cut(s) | 615, 1194, 1671, 2047 |
| BveI | ACCTGC | 1 cut(s) | 2442 |
| Cac8I | GCNNGC | 2 cut(s) | 1485, 1968 |
| CciI | TCATGA | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 1 cut(s) | 1129 |
| CseI | GACGC | 1 cut(s) | 1112 |
| Csp6I | GTAC | 3 cut(s) | 26, 662, 2217 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1902, 1937 |
| CviAII | CATG | 2 cut(s) | 185, 714 |
| CviQI | GTAC | 3 cut(s) | 26, 662, 2217 |
| DpnI | GATC | 7 cut(s) | 183, 194, 417, 428, 1196, 1926, 2379 |
| DpnII | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| DraIII | CACNNNGTG | 1 cut(s) | 872 |
| DriI | GACNNNNNGTC | 1 cut(s) | 604 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 604 |
| Ecl136II | GAGCTC | 1 cut(s) | 2424 |
| Eco130I | CCWWGG | 1 cut(s) | 2571 |
| Eco24I | GRGCYC | 1 cut(s) | 2426 |
| Eco47I | GGWCC | 1 cut(s) | 1129 |
| Eco53kI | GAGCTC | 1 cut(s) | 2424 |
| Eco57I | CTGAAG | 5 cut(s) | 708, 957, 1725, 2055, 2142 |
| EcoICRI | GAGCTC | 1 cut(s) | 2424 |
| EcoRII | CCWGG | 1 cut(s) | 703 |
| EcoT14I | CCWWGG | 1 cut(s) | 2571 |
| EcoT38I | GRGCYC | 1 cut(s) | 2426 |
| ErhI | CCWWGG | 1 cut(s) | 2571 |
| FaeI | CATG | 2 cut(s) | 188, 717 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 123, 155 |
| FatI | CATG | 2 cut(s) | 184, 713 |
| FauNDI | CATATG | 1 cut(s) | 2140 |
| Fnu4HI | GCNGC | 6 cut(s) | 336, 681, 684, 807, 1185, 1662 |
| FokI | GGATG | 7 cut(s) | 791, 959, 1769, 2273, 2375, 2417, 2588 |
| FriOI | GRGCYC | 1 cut(s) | 2426 |
| Fsp4HI | GCNGC | 6 cut(s) | 336, 681, 684, 807, 1185, 1662 |
| FspBI | CTAG | 5 cut(s) | 164, 257, 870, 1038, 1967 |
| GluI | GCNGC | 6 cut(s) | 336, 681, 684, 807, 1185, 1662 |
| GsaI | CCCAGC | 1 cut(s) | 2154 |
| GsuI | CTGGAG | 3 cut(s) | 668, 962, 1562 |
| HapII | CCGG | 3 cut(s) | 32, 431, 2532 |
| HgaI | GACGC | 1 cut(s) | 1112 |
| Hin1I | GRCGYC | 1 cut(s) | 1104 |
| Hin1II | CATG | 2 cut(s) | 188, 717 |
| HincII | GTYRAC | 1 cut(s) | 2098 |
| HindII | GTYRAC | 1 cut(s) | 2098 |
| HindIII | AAGCTT | 2 cut(s) | 743, 990 |
| HpaII | CCGG | 3 cut(s) | 32, 431, 2532 |
| HphI | GGTGA | 2 cut(s) | 2339, 2420 |
| Hpy166II | GTNNAC | 4 cut(s) | 1066, 1463, 1628, 2098 |
| Hpy8I | GTNNAC | 4 cut(s) | 1066, 1463, 1628, 2098 |
| HpyAV | CCTTC | 7 cut(s) | 61, 500, 836, 959, 1132, 1384, 2506 |
| HpyCH4III | ACNGT | 5 cut(s) | 16, 619, 787, 1516, 2042 |
| HpyCH4IV | ACGT | 1 cut(s) | 1695 |
| HpyCH4V | TGCA | 7 cut(s) | 20, 586, 775, 806, 1487, 1979, 2369 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 335, 709, 1112, 1328, 1976, 2311 |
| HpySE526I | ACGT | 1 cut(s) | 1695 |
| Hsp92I | GRCGYC | 1 cut(s) | 1104 |
| Hsp92II | CATG | 2 cut(s) | 188, 717 |
| Kzo9I | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| LmnI | GCTCC | 4 cut(s) | 238, 544, 1082, 2429 |
| Lsp1109I | GCAGC | 6 cut(s) | 322, 667, 670, 818, 1196, 1673 |
| LweI | GCATC | 5 cut(s) | 220, 526, 1340, 1768, 1966 |
| MaeI | CTAG | 5 cut(s) | 164, 257, 870, 1038, 1967 |
| MaeII | ACGT | 1 cut(s) | 1695 |
| MaeIII | GTNAC | 8 cut(s) | 380, 721, 1144, 1573, 2110, 2266, 2278, 2338 |
| MalI | GATC | 7 cut(s) | 183, 194, 417, 428, 1196, 1926, 2379 |
| MbiI | CCGCTC | 1 cut(s) | 126 |
| MboI | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| MfeI | CAATTG | 3 cut(s) | 1431, 1596, 2220 |
| MflI | RGATCY | 1 cut(s) | 426 |
| MhlI | GDGCHC | 1 cut(s) | 2426 |
| MlyI | GAGTC | 5 cut(s) | 464, 614, 647, 659, 1366 |
| MmeI | TCCRAC | 7 cut(s) | 253, 1186, 1488, 1498, 1663, 1813, 1981 |
| MspA1I | CMGCKG | 2 cut(s) | 176, 809 |
| MspCI | CTTAAG | 1 cut(s) | 1070 |
| MspI | CCGG | 3 cut(s) | 32, 431, 2532 |
| MspR9I | CCNGG | 3 cut(s) | 431, 705, 2533 |
| MunI | CAATTG | 3 cut(s) | 1431, 1596, 2220 |
| Mva1269I | GAATGC | 1 cut(s) | 331 |
| MvaI | CCWGG | 1 cut(s) | 705 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 335, 709, 1112, 1328, 1976, 2311 |
| NciI | CCSGG | 2 cut(s) | 431, 2533 |
| NdeI | CATATG | 1 cut(s) | 2140 |
| NdeII | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| NheI | GCTAGC | 1 cut(s) | 1966 |
| NlaIII | CATG | 2 cut(s) | 188, 717 |
| NlaIV | GGNNCC | 2 cut(s) | 36, 579 |
| NmuCI | GTSAC | 2 cut(s) | 380, 2266 |
| PagI | TCATGA | 1 cut(s) | 184 |
| PctI | GAATGC | 1 cut(s) | 331 |
| PfoI | TCCNGGA | 1 cut(s) | 429 |
| PkrI | GCNGC | 6 cut(s) | 337, 682, 685, 808, 1186, 1663 |
| PleI | GAGTC | 5 cut(s) | 463, 613, 646, 658, 1366 |
| PpsI | GAGTC | 5 cut(s) | 463, 613, 646, 658, 1366 |
| Psp124BI | GAGCTC | 1 cut(s) | 2426 |
| Psp6I | CCWGG | 1 cut(s) | 703 |
| PspFI | CCCAGC | 1 cut(s) | 2150 |
| PspGI | CCWGG | 1 cut(s) | 703 |
| PspN4I | GGNNCC | 2 cut(s) | 36, 579 |
| PspPI | GGNCC | 1 cut(s) | 1129 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 18, 50 |
| PstI | CTGCAG | 1 cut(s) | 808 |
| PsuI | RGATCY | 1 cut(s) | 426 |
| PvuII | CAGCTG | 2 cut(s) | 176, 809 |
| RsaI | GTAC | 3 cut(s) | 27, 663, 2218 |
| RsaNI | GTAC | 3 cut(s) | 26, 662, 2217 |
| SacI | GAGCTC | 1 cut(s) | 2426 |
| SatI | GCNGC | 6 cut(s) | 336, 681, 684, 807, 1185, 1662 |
| Sau3AI | GATC | 7 cut(s) | 181, 192, 415, 426, 1194, 1924, 2377 |
| Sau96I | GGNCC | 1 cut(s) | 1129 |
| SchI | GAGTC | 5 cut(s) | 464, 614, 647, 659, 1366 |
| ScrFI | CCNGG | 3 cut(s) | 431, 705, 2533 |
| SduI | GDGCHC | 1 cut(s) | 2426 |
| SfaNI | GCATC | 5 cut(s) | 220, 526, 1340, 1768, 1966 |
| SfcI | CTRYAG | 2 cut(s) | 489, 804 |
| SinI | GGWCC | 1 cut(s) | 1129 |
| SmlI | CTYRAG | 6 cut(s) | 241, 726, 746, 761, 1070, 2060 |
| SmoI | CTYRAG | 6 cut(s) | 241, 726, 746, 761, 1070, 2060 |
| SsiI | CCGC | 1 cut(s) | 126 |
| SspMI | CTAG | 5 cut(s) | 164, 257, 870, 1038, 1967 |
| SstI | GAGCTC | 1 cut(s) | 2426 |
| StyD4I | CCNGG | 3 cut(s) | 429, 703, 2531 |
| StyI | CCWWGG | 1 cut(s) | 2571 |
| TaaI | ACNGT | 5 cut(s) | 16, 619, 787, 1516, 2042 |
| TaiI | ACGT | 1 cut(s) | 1698 |
| TaqI | TCGA | 9 cut(s) | 180, 195, 564, 987, 995, 1197, 1674, 2380, 2549 |
| TatI | WGTACW | 1 cut(s) | 661 |
| TscAI | CASTG | 4 cut(s) | 615, 1194, 1671, 2047 |
| TseFI | GTSAC | 2 cut(s) | 380, 2266 |
| TseI | GCWGC | 6 cut(s) | 335, 680, 683, 806, 1184, 1661 |
| Tsp45I | GTSAC | 2 cut(s) | 380, 2266 |
| TspDTI | ATGAA | 7 cut(s) | 108, 795, 978, 1458, 1773, 2277, 2346 |
| TspGWI | ACGGA | 2 cut(s) | 448, 2195 |
| TspRI | CASTG | 4 cut(s) | 615, 1194, 1671, 2047 |
| Vha464I | CTTAAG | 1 cut(s) | 1070 |
| VpaK11BI | GGWCC | 1 cut(s) | 1129 |
| XbaI | TCTAGA | 2 cut(s) | 163, 256 |
| XspI | CTAG | 5 cut(s) | 164, 257, 870, 1038, 1967 |