FvH4_6g12260

At1g04910-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0014239
Physical Location & Seq
Forward (+)
7399205 .. 7403172
3968 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g12260.t1

Sequence Viewer

Length: 1980 bp
ATGTCGTCGGGTGGCCCAACCAGCTCGACCAGCACTACCCCGACCGCCTCCGCCGCCATCGCGCTGCCGACCACGACCAGACGACGTGTCGCTGACGGCCCCATGGACGCCTCCGCCGTGTCCACGGCCGTCCCGACCAACATCAACAACGTAAGCAAGATTAACCAGGACCTTGTCGTTTCCTCCTCGACGGACGAGGACGAGGAGAGCGACCCGACCGGAAACGGCGGCGCTGTCTCCGGGTCCGGGTCCCACGTGCACAGCAACCATTATTCTCCGGTGATAAAGTACCTGCTGCTTCGCAGGAGAGTGTTCTTTTGTATTCCCGAGGCGTGGCTGTTGTCGGTCCGGTCGGGAAGGAGCCTCGGCCGGAAGATCTTGGGGACGTTAACGTTGATGGCGGTTGTTTCGGTGTTCTTGACGTTCGCGTTTTTAGGGGGACACGTGGACGTTGGTTATGGGGTGAAGAGGACGGAGGGGAGGCTTTTGATTCTGAAGACGAACAATGATGATTGGAAGGTGGCGCAACGCGCCGTCGCGGAGGAGGACCAGGCCGCCAGGCCTAAACGTATTTTCGAGAGACTGTCGTTTTCGGAATCGGAATCGGAATCCTCCATGCCCAAACGACTTTTGGATGAACACAATACGATTCCAGGAATATGGATGAAACCAAGCAGTGATGGTTTTAATAAATGCATAACTCGACCCAAAAATCGGATCAGAACAGGATCGAAAACAAATGGCTATCTCCTTGTTCATGCCAATGGTGGATTGAATCAAATGAGAACAGGGATATGTGATATGGTAGCCGTTGCAAAGATAATGAATGCCACTCTGGTGCTTCCTTATCTGGATCACGAGTCTTTTTGGACTGATCCAAGTGGTTTCAAAGATATATTTGACTGGAGACACTTCATAGAGGTGTTAACAGATGATATTGAGATAATCGAGTATTTGCCAACCCATTATGCAGCTAAAAAGCCCCTTCTGAAGGCTCCCATCTCCTGGTCTAAGGCTAGTTATTACAGAAGAGAAATGATACCATTGTTGAAAAAGCATAAGGTTATAAAGTTCACCCACACTGATTCGCGTCTTGCTAATAATGGACTTGCAAGTTCCATTCAAAGGCTGAGGTGCCGTGCCAATTATGTGGGTCTCCGATATACCAAGGAGATTGAGGATCTAGGGAAAGTTTTGGTCAATAGATTAAAGAAAAATGGCAATCCATATATTGCTCTTCATTTAAGATATGAGAAAGACATGCTTGCTTTCACTGGCTGCAGTCACAACCTTACTGCAGAGGATGATGCAGAACTTCGGGATATGAGGTACAATGTTAAACATTGGAAGGAGAAAGAGATAGATAGTGAAGAGCGAAGACTCCAGGGTGGATGCCCATTTTCCCCTAGAGAGGCAGCCCTGTTCCTCAAGGCCATGGGTTACCCTTCGACAACAACAATATACATTGTTGCTGGGGAGATATATGGCAGCAATAGCATGGCTGCATTTCGCTCGGAGTATCCTAATGTCTTTTCTCATAACACTCTTGCAACTGAGGAAGAGTTAGACCCCTTTAGGCCTTATCAAAATCGCCTTGCTGCCTTGGATTACATCGTAGCACTAGAGAGTGATGTCTTTGTATATACATACGACGGAAATATGGCGAAGGCAGTACAGGGACATAGAAGATTTGAAGGATTTCGGAAGACTATTAACCCTGACAGACAAAATTTTGTGAAACTGGTCGACCTATTTGATAAAGGTGATATATCATGGGAAGAATTTTCTTCGGAAGTTAGAACTCTGCATTCTGATCGGCTGGGAGCACCATATGTTAGACAGATAGGAGAGGCGCCTAGGTTGGAGGAGAACTTTTATGCAAATCCTTTCCCTGGTTGTATCTGTAACAATTCACAGGAGCAAATTGCTAGCCTGAAATCTGACGCGAGACGGAGCATAAGGGTTTCATCGCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

660

Amino Acids

74.11

Weight (kDa)

8.9

Isoelectric Point (pI)

47.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 249 - 564 1.6e-104 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014239)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37980 AT5G01100
fragaria_vesca FvH4_6g12260
malus_domestica MD04G1144500.v1.1 MD12G1158500.v1.1
prunus_persica Prupe.6G268900_v2.0.a1
pyrus_communis pycom05g13890 pycom12g15050
rosa_chinensis RchiOBHm_Chr3g0464061
rosa_laevigata RLG00000024725
rosa_multiflora Rmu_sc0006492.1_g000019
rosa_roxburghii Rroxscaffold_6G00416010
rosa_rugosa Rorug03G0070500
rosa_samantha Rh3BG131600 Rh3CG133900 Rh3DG132900
rosa_wichuraiana Rw3G010760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1067
Acc36I ACCTGC 1 cut(s) 300
AccB1I GGYRCC 2 cut(s) 1134, 1852
AccB7I CCANNNNNTGG 1 cut(s) 1005
AccI GTMKAC 1 cut(s) 1746
AccII CGCG 6 cut(s) 62, 428, 531, 539, 1090, 1946
AciI CCGC 8 cut(s) 45, 51, 54, 114, 228, 401, 539, 555
AclI AACGTT 1 cut(s) 392
AclWI GGATC 5 cut(s) 725, 736, 861, 869, 1188
AcoI YGGCCR 2 cut(s) 126, 367
AcsI RAATTY 2 cut(s) 1729, 1781
AcuI CTGAAG 2 cut(s) 515, 1010
AcvI CACGTG 2 cut(s) 256, 445
AcyI GRCGYC 2 cut(s) 108, 1853
AfaI GTAC 3 cut(s) 290, 1331, 1674
AfiI CCNNNNNNNGG 8 cut(s) 246, 333, 714, 991, 1005, 1125, 1411, 1892
AflIII ACRYGT 2 cut(s) 85, 442
AgsI TTSAA 5 cut(s) 775, 889, 1051, 1124, 1694
AhdI GACNNNNNGTC 1 cut(s) 86
AjiI CACGTC 1 cut(s) 86
AjnI CCWGG 7 cut(s) 165, 549, 557, 652, 1004, 1383, 1891
AleI CACNNNNGTG 1 cut(s) 836
AluBI AGCT 2 cut(s) 24, 974
AluI AGCT 2 cut(s) 24, 974
Alw21I GWGCWC 2 cut(s) 261, 1828
Alw26I GTCTC 5 cut(s) 241, 574, 901, 1160, 1942
Alw44I GTGCAC 1 cut(s) 257
AlwI GGATC 5 cut(s) 725, 736, 861, 869, 1188
Ama87I CYCGRG 1 cut(s) 326
AoxI GGCC 8 cut(s) 13, 97, 126, 367, 552, 560, 1431, 1577
ApaLI GTGCAC 1 cut(s) 257
ApeKI GCWGC 8 cut(s) 64, 295, 971, 1278, 1415, 1488, 1502, 1598
ApoI RAATTY 2 cut(s) 1729, 1781
Asp700I GAANNNNTTC 1 cut(s) 1698
AspA2I CCTAGG 1 cut(s) 1856
AspLEI GCGC 5 cut(s) 64, 233, 526, 533, 1855
AspS9I GGNCC 7 cut(s) 14, 98, 169, 243, 249, 346, 547
AsuC2I CCSGG 2 cut(s) 241, 247
AsuHPI GGTGA 4 cut(s) 292, 475, 1066, 1775
AsuNHI GCTAGC 1 cut(s) 1928
AvaI CYCGRG 1 cut(s) 326
AvaII GGWCC 5 cut(s) 169, 243, 249, 346, 547
AvrII CCTAGG 1 cut(s) 1856
BaeGI GKGCMC 1 cut(s) 261
BaeI ACNNNNGTAYC 2 cut(s) 1031, 1064
BanI GGYRCC 2 cut(s) 1134, 1852
BauI CACGAG 1 cut(s) 857
BbrPI CACGTG 2 cut(s) 256, 445
BbsI GAAGAC 3 cut(s) 503, 1384, 1712
Bbv12I GWGCWC 2 cut(s) 261, 1828
BbvCI CCTCAGC 1 cut(s) 1130
BbvI GCAGC 8 cut(s) 51, 282, 983, 1265, 1427, 1489, 1500, 1585
BccI CCATC 4 cut(s) 65, 391, 674, 1007
BceAI ACGGC 8 cut(s) 101, 112, 113, 141, 241, 518, 794, 1122
BcgI CGANNNNNNTGC 4 cut(s) 1494, 1528, 1796, 1830
BciT130I CCWGG 7 cut(s) 167, 551, 559, 654, 1006, 1385, 1893
BciVI GTATCC 1 cut(s) 1530
BcnI CCSGG 2 cut(s) 241, 247
BcoDI GTCTC 5 cut(s) 241, 574, 901, 1160, 1942
BfaI CTAG 6 cut(s) 1017, 1184, 1407, 1622, 1857, 1929
BfmI CTRYAG 2 cut(s) 1279, 1296
BfoI RGCGCY 2 cut(s) 234, 1856
BfuAI ACCTGC 1 cut(s) 300
BfuI GTATCC 1 cut(s) 1530
BglII AGATCT 1 cut(s) 375
BlnI CCTAGG 1 cut(s) 1856
Bme1390I CCNGG 9 cut(s) 167, 241, 247, 551, 559, 654, 1006, 1385, 1893
Bme18I GGWCC 5 cut(s) 169, 243, 249, 346, 547
BmeRI GACNNNNNGTC 1 cut(s) 86
BmeT110I CYCGRG 1 cut(s) 326
BmgBI CACGTC 1 cut(s) 86
BmgT120I GGNCC 7 cut(s) 14, 98, 169, 243, 249, 346, 547
BmiI GGNNCC 8 cut(s) 100, 244, 250, 251, 362, 996, 1136, 1854
BmrFI CCNGG 9 cut(s) 167, 241, 247, 551, 559, 654, 1006, 1385, 1893
BmsI GCATC 2 cut(s) 1297, 1382
BmtI GCTAGC 1 cut(s) 1932
BpiI GAAGAC 3 cut(s) 503, 1384, 1712
BpmI CTGGAG 2 cut(s) 925, 1367
Bpu10I CCTNAGC 1 cut(s) 1130
BpuEI CTTGAG 1 cut(s) 1412
BpuMI CCSGG 2 cut(s) 241, 247
BsaAI YACGTR 2 cut(s) 256, 445
BsaHI GRCGYC 2 cut(s) 108, 1853
BsaI GGTCTC 1 cut(s) 1160
BsaWI WCCGGW 3 cut(s) 218, 277, 348
Bsc4I CCNNNNNNNGG 8 cut(s) 246, 333, 714, 991, 1005, 1125, 1411, 1892
Bse1I ACTGG 3 cut(s) 908, 1279, 1746
BseBI CCWGG 7 cut(s) 167, 551, 559, 654, 1006, 1385, 1893
BseGI GGATG 4 cut(s) 640, 669, 1309, 1397
BseLI CCNNNNNNNGG 8 cut(s) 246, 333, 714, 991, 1005, 1125, 1411, 1892
BseMII CTCAG 2 cut(s) 1121, 1545
BseNI ACTGG 3 cut(s) 908, 1279, 1746
BseRI GAGGAG 4 cut(s) 175, 218, 557, 1880
BseSI GKGCMC 1 cut(s) 261
BseX3I CGGCCG 2 cut(s) 126, 367
BseXI GCAGC 8 cut(s) 51, 282, 983, 1265, 1427, 1489, 1500, 1585
BseYI CCCAGC 2 cut(s) 1472, 1819
Bsh1236I CGCG 6 cut(s) 62, 428, 531, 539, 1090, 1946
Bsh1285I CGRYCG 5 cut(s) 45, 129, 219, 353, 370
BshFI GGCC 8 cut(s) 15, 99, 128, 369, 554, 562, 1433, 1579
BshNI GGYRCC 2 cut(s) 1134, 1852
BsiEI CGRYCG 5 cut(s) 45, 129, 219, 353, 370
BsiHKAI GWGCWC 2 cut(s) 261, 1828
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 6 cut(s) 219, 240, 246, 278, 349, 370
BslFI GGGAC 5 cut(s) 116, 235, 397, 453, 1692
BslI CCNNNNNNNGG 8 cut(s) 246, 333, 714, 991, 1005, 1125, 1411, 1892
BsmAI GTCTC 5 cut(s) 241, 574, 901, 1160, 1942
BsmBI CGTCTC 1 cut(s) 1942
BsmFI GGGAC 5 cut(s) 116, 235, 397, 453, 1692
BsmI GAATGC 2 cut(s) 832, 1807
BsnI GGCC 8 cut(s) 15, 99, 128, 369, 554, 562, 1433, 1579
Bso31I GGTCTC 1 cut(s) 1160
BsoBI CYCGRG 1 cut(s) 326
Bsp1286I GDGCHC 2 cut(s) 261, 1828
Bsp143I GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
Bsp19I CCATGG 2 cut(s) 102, 1434
BspACI CCGC 8 cut(s) 45, 51, 54, 114, 228, 401, 539, 555
BspANI GGCC 8 cut(s) 15, 99, 128, 369, 554, 562, 1433, 1579
BspCNI CTCAG 2 cut(s) 1122, 1546
BspFNI CGCG 6 cut(s) 62, 428, 531, 539, 1090, 1946
BspLI GGNNCC 8 cut(s) 100, 244, 250, 251, 362, 996, 1136, 1854
BspMAI CTGCAG 2 cut(s) 1283, 1300
BspMI ACCTGC 1 cut(s) 300
BspOI GCTAGC 1 cut(s) 1932
BspPI GGATC 5 cut(s) 725, 736, 861, 869, 1188
BspQI GCTCTTC 2 cut(s) 1242, 1365
BspT107I GGYRCC 2 cut(s) 1134, 1852
BspTNI GGTCTC 1 cut(s) 1160
BsrI ACTGG 3 cut(s) 908, 1279, 1746
BssMI GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
BssNI GRCGYC 2 cut(s) 108, 1853
BssSI CACGAG 1 cut(s) 857
BssT1I CCWWGG 5 cut(s) 102, 1167, 1434, 1602, 1856
Bst2BI CACGAG 1 cut(s) 857
Bst2UI CCWGG 7 cut(s) 167, 551, 559, 654, 1006, 1385, 1893
Bst4CI ACNGT 1 cut(s) 585
Bst6I CTCTTC 5 cut(s) 461, 1024, 1242, 1365, 1554
BstACI GRCGYC 2 cut(s) 108, 1853
BstBAI YACGTR 2 cut(s) 256, 445
BstC8I GCNNGC 2 cut(s) 1266, 1930
BstDEI CTNAG 3 cut(s) 1011, 1130, 1554
BstDSI CCRYGG 3 cut(s) 102, 123, 1434
BstEII GGTNACC 1 cut(s) 1439
BstENI CCTNNNNNAGG 1 cut(s) 989
BstF5I GGATG 4 cut(s) 640, 669, 1309, 1397
BstFNI CGCG 6 cut(s) 62, 428, 531, 539, 1090, 1946
BstH2I RGCGCY 2 cut(s) 234, 1856
BstHHI GCGC 5 cut(s) 64, 233, 526, 533, 1855
BstKTI GATC 7 cut(s) 378, 720, 731, 856, 877, 1183, 1816
BstMAI GTCTC 5 cut(s) 241, 574, 901, 1160, 1942
BstMBI GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
BstMCI CGRYCG 5 cut(s) 45, 129, 219, 353, 370
BstMWI GCNNNNNNNGC 6 cut(s) 21, 30, 53, 59, 530, 1494
BstNI CCWGG 7 cut(s) 167, 551, 559, 654, 1006, 1385, 1893
BstNSI RCATGY 1 cut(s) 1264
BstPI GGTNACC 1 cut(s) 1439
BstSCI CCNGG 9 cut(s) 165, 239, 245, 549, 557, 652, 1004, 1383, 1891
BstSFI CTRYAG 2 cut(s) 1279, 1296
BstSLI GKGCMC 1 cut(s) 261
BstUI CGCG 6 cut(s) 62, 428, 531, 539, 1090, 1946
BstV1I GCAGC 8 cut(s) 51, 282, 983, 1265, 1427, 1489, 1500, 1585
BstV2I GAAGAC 3 cut(s) 503, 1384, 1712
BstX2I RGATCY 2 cut(s) 375, 1180
BstXI CCANNNNNNTGG 2 cut(s) 660, 1150
BstYI RGATCY 2 cut(s) 375, 1180
BstZI CGGCCG 2 cut(s) 126, 367
BsuI GTATCC 1 cut(s) 1530
BsuRI GGCC 8 cut(s) 15, 99, 128, 369, 554, 562, 1433, 1579
BtgI CCRYGG 3 cut(s) 102, 123, 1434
BtgZI GCGATG 2 cut(s) 43, 1953
BtrI CACGTC 1 cut(s) 86
BtsCI GGATG 4 cut(s) 640, 669, 1309, 1397
BtsI GCAGTG 1 cut(s) 682
BtsIMutI CAGTG 3 cut(s) 682, 1080, 1272
BveI ACCTGC 1 cut(s) 300
Cac8I GCNNGC 2 cut(s) 1266, 1930
CfoI GCGC 5 cut(s) 64, 233, 526, 533, 1855
Cfr13I GGNCC 7 cut(s) 14, 98, 169, 243, 249, 346, 547
CpoI CGGWCCG 1 cut(s) 346
CseI GACGC 3 cut(s) 116, 1079, 1952
Csp6I GTAC 3 cut(s) 289, 1330, 1673
CspI CGGWCCG 1 cut(s) 346
CviAII CATG 7 cut(s) 103, 616, 758, 1261, 1435, 1498, 1773
CviQI GTAC 3 cut(s) 289, 1330, 1673
DdeI CTNAG 3 cut(s) 1011, 1130, 1554
DinI GGCGCC 1 cut(s) 1854
DpnI GATC 7 cut(s) 377, 719, 730, 855, 876, 1182, 1815
DpnII GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
DriI GACNNNNNGTC 1 cut(s) 86
EaeI YGGCCR 2 cut(s) 126, 367
EagI CGGCCG 2 cut(s) 126, 367
Eam1104I CTCTTC 5 cut(s) 461, 1024, 1242, 1365, 1554
Eam1105I GACNNNNNGTC 1 cut(s) 86
EarI CTCTTC 5 cut(s) 461, 1024, 1242, 1365, 1554
EciI GGCGGA 2 cut(s) 40, 103
EclXI CGGCCG 2 cut(s) 126, 367
Eco130I CCWWGG 5 cut(s) 102, 1167, 1434, 1602, 1856
Eco147I AGGCCT 2 cut(s) 562, 1579
Eco31I GGTCTC 1 cut(s) 1160
Eco47I GGWCC 5 cut(s) 169, 243, 249, 346, 547
Eco52I CGGCCG 2 cut(s) 126, 367
Eco57I CTGAAG 2 cut(s) 515, 1010
Eco72I CACGTG 2 cut(s) 256, 445
Eco88I CYCGRG 1 cut(s) 326
Eco91I GGTNACC 1 cut(s) 1439
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoO109I RGGNCCY 2 cut(s) 169, 249
EcoO65I GGTNACC 1 cut(s) 1439
EcoRII CCWGG 7 cut(s) 165, 549, 557, 652, 1004, 1383, 1891
EcoT14I CCWWGG 5 cut(s) 102, 1167, 1434, 1602, 1856
EcoT22I ATGCAT 1 cut(s) 698
EgeI GGCGCC 1 cut(s) 1854
EheI GGCGCC 1 cut(s) 1854
ErhI CCWWGG 5 cut(s) 102, 1167, 1434, 1602, 1856
Esp3I CGTCTC 1 cut(s) 1942
FaeI CATG 7 cut(s) 106, 619, 761, 1264, 1438, 1501, 1776
FalI AAGNNNNNCTT 2 cut(s) 1248, 1280
FaqI GGGAC 5 cut(s) 116, 235, 397, 453, 1692
FatI CATG 7 cut(s) 102, 615, 757, 1260, 1434, 1497, 1772
FauNDI CATATG 1 cut(s) 1831
FblI GTMKAC 1 cut(s) 1746
FokI GGATG 4 cut(s) 647, 676, 1316, 1404
FspBI CTAG 6 cut(s) 1017, 1184, 1407, 1622, 1857, 1929
GlaI GCGC 5 cut(s) 63, 232, 525, 532, 1854
GsaI CCCAGC 2 cut(s) 1476, 1823
GsuI CTGGAG 2 cut(s) 925, 1367
HaeII RGCGCY 2 cut(s) 234, 1856
HaeIII GGCC 8 cut(s) 15, 99, 128, 369, 554, 562, 1433, 1579
HapII CCGG 6 cut(s) 219, 240, 246, 278, 349, 370
HgaI GACGC 3 cut(s) 116, 1079, 1952
HhaI GCGC 5 cut(s) 64, 233, 526, 533, 1855
Hin1I GRCGYC 2 cut(s) 108, 1853
Hin1II CATG 7 cut(s) 106, 619, 761, 1264, 1438, 1501, 1776
Hin6I GCGC 5 cut(s) 62, 231, 524, 531, 1853
HinP1I GCGC 5 cut(s) 62, 231, 524, 531, 1853
HincII GTYRAC 3 cut(s) 390, 927, 1747
HindII GTYRAC 3 cut(s) 390, 927, 1747
HinfI GANTC 9 cut(s) 490, 596, 602, 608, 649, 775, 860, 1085, 1380
HpaI GTTAAC 2 cut(s) 390, 927
HpaII CCGG 6 cut(s) 219, 240, 246, 278, 349, 370
HphI GGTGA 4 cut(s) 292, 475, 1066, 1775
Hpy166II GTNNAC 7 cut(s) 123, 259, 390, 448, 927, 1074, 1747
Hpy188III TCNNGA 8 cut(s) 133, 326, 354, 418, 577, 851, 857, 1319
Hpy8I GTNNAC 7 cut(s) 123, 259, 390, 448, 927, 1074, 1747
Hpy99I CGWCG 5 cut(s) 10, 87, 193, 539, 1655
HpyAV CCTTC 8 cut(s) 351, 511, 985, 995, 1342, 1455, 1660, 1688
HpyCH4III ACNGT 1 cut(s) 585
HpyCH4IV ACGT 9 cut(s) 85, 150, 255, 386, 392, 422, 444, 450, 568
HpyF10VI GCNNNNNNNGC 6 cut(s) 21, 30, 53, 59, 530, 1494
HpyF3I CTNAG 3 cut(s) 1011, 1130, 1554
HpySE526I ACGT 9 cut(s) 85, 150, 255, 386, 392, 422, 444, 450, 568
Hsp92I GRCGYC 2 cut(s) 108, 1853
Hsp92II CATG 7 cut(s) 106, 619, 761, 1264, 1438, 1501, 1776
HspAI GCGC 5 cut(s) 62, 231, 524, 531, 1853
KasI GGCGCC 1 cut(s) 1852
KflI GGGWCCC 1 cut(s) 249
KspAI GTTAAC 2 cut(s) 390, 927
Kzo9I GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
LguI GCTCTTC 2 cut(s) 1242, 1365
LmnI GCTCC 5 cut(s) 360, 1000, 1823, 1918, 1953
Lsp1109I GCAGC 8 cut(s) 51, 282, 983, 1265, 1427, 1489, 1500, 1585
LweI GCATC 2 cut(s) 1297, 1382
MaeI CTAG 6 cut(s) 1017, 1184, 1407, 1622, 1857, 1929
MaeII ACGT 9 cut(s) 85, 150, 255, 386, 392, 422, 444, 450, 568
MaeIII GTNAC 3 cut(s) 1283, 1439, 1904
MalI GATC 7 cut(s) 377, 719, 730, 855, 876, 1182, 1815
MboI GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
MflI RGATCY 2 cut(s) 375, 1180
MhlI GDGCHC 2 cut(s) 261, 1828
MluCI AATT 5 cut(s) 1144, 1729, 1781, 1909, 1923
Mly113I GGCGCC 1 cut(s) 1853
MlyI GAGTC 2 cut(s) 869, 1374
MmeI TCCRAC 1 cut(s) 1842
Mph1103I ATGCAT 1 cut(s) 698
MroXI GAANNNNTTC 1 cut(s) 1698
MseI TTAA 8 cut(s) 162, 389, 687, 926, 1208, 1244, 1338, 1713
MslI CAYNNNNRTG 3 cut(s) 762, 836, 920
MspI CCGG 6 cut(s) 219, 240, 246, 278, 349, 370
MspR9I CCNGG 9 cut(s) 167, 241, 247, 551, 559, 654, 1006, 1385, 1893
Mva1269I GAATGC 2 cut(s) 832, 1807
MvaI CCWGG 7 cut(s) 167, 551, 559, 654, 1006, 1385, 1893
MvnI CGCG 6 cut(s) 62, 428, 531, 539, 1090, 1946
MwoI GCNNNNNNNGC 6 cut(s) 21, 30, 53, 59, 530, 1494
NarI GGCGCC 1 cut(s) 1853
NciI CCSGG 2 cut(s) 241, 247
NcoI CCATGG 2 cut(s) 102, 1434
NdeI CATATG 1 cut(s) 1831
NdeII GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
NheI GCTAGC 1 cut(s) 1928
NlaIII CATG 7 cut(s) 106, 619, 761, 1264, 1438, 1501, 1776
NlaIV GGNNCC 8 cut(s) 100, 244, 250, 251, 362, 996, 1136, 1854
NmeAIII GCCGAG 1 cut(s) 345
NmuCI GTSAC 1 cut(s) 1283
NsiI ATGCAT 1 cut(s) 698
NspI RCATGY 1 cut(s) 1264
OliI CACNNNNGTG 1 cut(s) 836
PceI AGGCCT 2 cut(s) 562, 1579
PciSI GCTCTTC 2 cut(s) 1242, 1365
PcsI WCGNNNNNNNCGW 3 cut(s) 114, 131, 207
PctI GAATGC 2 cut(s) 832, 1807
PdmI GAANNNNTTC 1 cut(s) 1698
PfeI GAWTC 7 cut(s) 490, 596, 602, 608, 649, 775, 1085
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 1 cut(s) 1005
PfoI TCCNGGA 1 cut(s) 652
PleI GAGTC 2 cut(s) 868, 1374
PluTI GGCGCC 1 cut(s) 1856
PmaCI CACGTG 2 cut(s) 256, 445
PmlI CACGTG 2 cut(s) 256, 445
PpsI GAGTC 2 cut(s) 868, 1374
Ppu21I YACGTR 2 cut(s) 256, 445
PpuMI RGGWCCY 2 cut(s) 169, 249
PsiI TTATAA 1 cut(s) 1067
Psp1406I AACGTT 1 cut(s) 392
Psp5II RGGWCCY 2 cut(s) 169, 249
Psp6I CCWGG 7 cut(s) 165, 549, 557, 652, 1004, 1383, 1891
PspCI CACGTG 2 cut(s) 256, 445
PspEI GGTNACC 1 cut(s) 1439
PspFI CCCAGC 2 cut(s) 1472, 1819
PspGI CCWGG 7 cut(s) 165, 549, 557, 652, 1004, 1383, 1891
PspN4I GGNNCC 8 cut(s) 100, 244, 250, 251, 362, 996, 1136, 1854
PspPI GGNCC 7 cut(s) 14, 98, 169, 243, 249, 346, 547
PspPPI RGGWCCY 2 cut(s) 169, 249
PstI CTGCAG 2 cut(s) 1283, 1300
PsuI RGATCY 2 cut(s) 375, 1180
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 3 cut(s) 290, 1331, 1674
RsaNI GTAC 3 cut(s) 289, 1330, 1673
RseI CAYNNNNRTG 3 cut(s) 762, 836, 920
Rsr2I CGGWCCG 1 cut(s) 346
RsrII CGGWCCG 1 cut(s) 346
SalI GTCGAC 1 cut(s) 1745
SapI GCTCTTC 2 cut(s) 1242, 1365
SaqAI TTAA 8 cut(s) 162, 389, 687, 926, 1208, 1244, 1338, 1713
Sau3AI GATC 7 cut(s) 375, 717, 728, 853, 874, 1180, 1813
Sau96I GGNCC 7 cut(s) 14, 98, 169, 243, 249, 346, 547
SchI GAGTC 2 cut(s) 869, 1374
ScrFI CCNGG 9 cut(s) 167, 241, 247, 551, 559, 654, 1006, 1385, 1893
SduI GDGCHC 2 cut(s) 261, 1828
SfaNI GCATC 2 cut(s) 1297, 1382
SfcI CTRYAG 2 cut(s) 1279, 1296
SfoI GGCGCC 1 cut(s) 1854
SinI GGWCC 5 cut(s) 169, 243, 249, 346, 547
SmiMI CAYNNNNRTG 3 cut(s) 762, 836, 920
SmlI CTYRAG 1 cut(s) 1427
SmoI CTYRAG 1 cut(s) 1427
Sse9I AATT 5 cut(s) 1144, 1729, 1781, 1909, 1923
SseBI AGGCCT 2 cut(s) 562, 1579
SsiI CCGC 8 cut(s) 45, 51, 54, 114, 228, 401, 539, 555
SspDI GGCGCC 1 cut(s) 1852
SspMI CTAG 6 cut(s) 1017, 1184, 1407, 1622, 1857, 1929
StuI AGGCCT 2 cut(s) 562, 1579
StyD4I CCNGG 9 cut(s) 165, 239, 245, 549, 557, 652, 1004, 1383, 1891
StyI CCWWGG 5 cut(s) 102, 1167, 1434, 1602, 1856
TaaI ACNGT 1 cut(s) 585
TaiI ACGT 9 cut(s) 88, 153, 258, 389, 395, 425, 447, 453, 571
TaqI TCGA 8 cut(s) 26, 188, 576, 703, 731, 948, 1448, 1746
TaqII GACCGA 1 cut(s) 334
TasI AATT 5 cut(s) 1144, 1729, 1781, 1909, 1923
TatI WGTACW 1 cut(s) 1672
TauI GCSGC 3 cut(s) 56, 231, 557
TfiI GAWTC 7 cut(s) 490, 596, 602, 608, 649, 775, 1085
Tru1I TTAA 8 cut(s) 162, 389, 687, 926, 1208, 1244, 1338, 1713
Tru9I TTAA 8 cut(s) 162, 389, 687, 926, 1208, 1244, 1338, 1713
TscAI CASTG 3 cut(s) 682, 1087, 1279
TseFI GTSAC 1 cut(s) 1283
TseI GCWGC 8 cut(s) 64, 295, 971, 1278, 1415, 1488, 1502, 1598
Tsp45I GTSAC 1 cut(s) 1283
TspDTI ATGAA 7 cut(s) 651, 680, 746, 839, 904, 1229, 1956
TspGWI ACGGA 4 cut(s) 206, 488, 1668, 1966
TspRI CASTG 3 cut(s) 682, 1087, 1279
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 1 cut(s) 1005
VneI GTGCAC 1 cut(s) 257
VpaK11BI GGWCC 5 cut(s) 169, 243, 249, 346, 547
XagI CCTNNNNNAGG 1 cut(s) 989
XapI RAATTY 2 cut(s) 1729, 1781
XceI RCATGY 1 cut(s) 1264
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XmaJI CCTAGG 1 cut(s) 1856
XmiI GTMKAC 1 cut(s) 1746
XmnI GAANNNNTTC 1 cut(s) 1698
XspI CTAG 6 cut(s) 1017, 1184, 1407, 1622, 1857, 1929
Zsp2I ATGCAT 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.