RLG00000024725

At1g04910-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0014239
Physical Location & Seq
Reverse (-)
38546418 .. 38549580
3163 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024725

Sequence Viewer

Length: 1992 bp
ATGTCGTCGGGTGGCCTTAACAGCTCGACCAGTAATACTCCGACCACCGCCTCCGCGGCCATCGCGCTGCCCACTACGACCAGACGACGCGTCGCCGATGGTCTCACGGACGCCTCCGCCGTCACCTTGGCCTTACCGACCAACATCATCAACGTTGGCAAGATTAACCCGGACGTGGTTGTTTCCTCGGAGGACGAGGACGAGGACGAGGAGAGCGACCCGACCTGCTGCAACGGCTCTATCTCCGGCTCAGGGTCCCATCTCCACAGCAACCATTATTCTCCCGTGATCAAGTACCTGCTGCTTCGCAGGAGAGTGTTCTTTTGTGTTCCCGAGGCGTGGCTGTTGTCGGTCCGGTCGGGGAGGAACCTCGGCCGTAAGATCTTCGGGGCGCTAATGTTGATGGCGGTTTTTTCTGTGTTCTTTGCGTTTCTGGGCGGACACGTGGAGGTTGGTGATAGGGTGAACAGGACGGAGGGGAGGCTTTTGATTCTGAAGACGTTACAAGATGATGGGACGGTGGCGCAACACGCCGTCACTGAGAACCAGGCGGCCAGGCCCAAACGGGTTTTTGAGAGAATGTCGTTATCGGAATCGGAATCTGAATCGGAATCGGAAGCGGAATCGGAATCCTCCATGCCCAAAAGTCTTTTGGATGAACAGAACACGATTCCAGAAATATGGATGAAACCAGGTAGTGACGATTTTAATAAATGCATAGCTCGACCCAGAAATCGGAAAAGAACAGGATCGAAAACAAATGGCTATCTCCTTGTTCATGCCAATGGTGGATTGAATCAAATGAGAACAGGGATTTGTGATATGGTAGCCGTTGCAAAGATAATGAATGCTACTCTGGTGCTTCCTTACCTAGATCACGAGTCTTTTTGGACTGATCCAAGTGGTTTTAAAGATATATTTGACTGGAGACACTTCATAGACGTGTTAACAGATGATATTGAGATAATCGAGTATTTGCCAACCCGTTACACAGCTCAAAAGCCCCTTCTGAAGGCTCCCATCTCCTGGTCTAAGGCTAGTTATTACAGAAAAGAAATGATACCGTTGTTGAAAAAGCATAAGGTTGTAAAGTTTACCCACACTGATTCGCGTCTTGCTAATAATGGACTTGCAAGTTCCATCCAAAGGCTGAGGTGCCGTGCCAATTATGAGGGTCTTCGATATACAAATGAGATTGAGGATCTTGGGAAAATTTTGGTCAATAGATTAAGGAACAATGGCAATCCATATATTGCTCTTCATTTAAGATATGAGAAAGACATGCTTGCTTTCACTGGCTGCAGCCACAACCTTACTGCAAAGGAAGATGAGGAACTTCGGGATATGAGATACAGTGTTAAACATTGGAAGGAGAAAGAGATAGATAGTGAAGAGCGACGACTCCAAGGTGGATGCCCATTTTCCCCCAGAGAGGCAGCCCTGTTCCTCAAGGCCATGGGATACCCTTCGACAACAACAATCTACATTGTTGCTGGGGAGATATATGGCAGCAATAGCATGGCTGCATTTCGCGCTGAGTATCCTAATGTCTTCTCTCATAACACTCTTGCAACAGAAGAAGAGTTGAAGCCCTTCAAGCCATATCAAAATCGCCTTGCTGCCTTGGATTACATAGTAGCATTAGAAAGTGATGTCTTTGTATATACATACGATGGAAACATGGCTAAGGCAGTACAGGGACATAGAAGATATGAAGGATTTCGGAAGACTATTAACCCTGACAGACAAAATTTTGTGAAACTGGTTGACCTATTGGATAAGGGTGATTTATCATGGGAAGAATTTTCTTCAGCGGTTACAACTCTGCATTCTGATCGGCTGGGAGCACCATATGTTCGACAGATAGGAGAGTCACCCAGGTTGGAGGAGAATTTTTATGCAAATCCTTTCCCTGGTTGTATCTGCAACAACTCCCAGGAGCACATTGCTCGCCTGAAGTCCGATGAGAGACGGAGCACAAGTGTTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

664

Amino Acids

74.67

Weight (kDa)

6.65

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 256 - 572 2.9e-106 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014239)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37980 AT5G01100
fragaria_vesca FvH4_6g12260
malus_domestica MD04G1144500.v1.1 MD12G1158500.v1.1
prunus_persica Prupe.6G268900_v2.0.a1
pyrus_communis pycom05g13890 pycom12g15050
rosa_chinensis RchiOBHm_Chr3g0464061
rosa_laevigata RLG00000024725
rosa_multiflora Rmu_sc0006492.1_g000019
rosa_roxburghii Rroxscaffold_6G00416010
rosa_rugosa Rorug03G0070500
rosa_samantha Rh3BG131600 Rh3CG133900 Rh3DG132900
rosa_wichuraiana Rw3G010760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 233, 306
AccB1I GGYRCC 1 cut(s) 1155
AccB7I CCANNNNNTGG 1 cut(s) 1026
AccII CGCG 5 cut(s) 56, 65, 90, 1111, 1533
AciI CCGC 9 cut(s) 48, 54, 56, 117, 407, 438, 551, 620, 1814
AclI AACGTT 1 cut(s) 153
AclWI GGATC 3 cut(s) 757, 890, 1209
AcoI YGGCCR 3 cut(s) 57, 373, 552
AcsI RAATTY 4 cut(s) 1212, 1750, 1802, 1891
AcuI CTGAAG 4 cut(s) 515, 1031, 1794, 1976
AcvI CACGTG 1 cut(s) 445
AcyI GRCGYC 1 cut(s) 111
AfaI GTAC 2 cut(s) 296, 1695
AfiI CCNNNNNNNGG 9 cut(s) 175, 252, 339, 735, 1012, 1026, 1146, 1432, 1913
AflIII ACRYGT 3 cut(s) 88, 442, 942
AgsI TTSAA 4 cut(s) 796, 1072, 1588, 1597
AhdI GACNNNNNGTC 1 cut(s) 89
AjiI CACGTC 2 cut(s) 175, 943
AjnI CCWGG 7 cut(s) 546, 554, 691, 1025, 1877, 1912, 1935
AluBI AGCT 3 cut(s) 24, 722, 995
AluI AGCT 3 cut(s) 24, 722, 995
Alw21I GWGCWC 3 cut(s) 1849, 1944, 1979
Alw26I GTCTC 3 cut(s) 107, 922, 1963
AlwI GGATC 3 cut(s) 757, 890, 1209
Ama87I CYCGRG 1 cut(s) 332
AoxI GGCC 7 cut(s) 13, 57, 129, 373, 552, 557, 1452
ApeKI GCWGC 9 cut(s) 67, 228, 301, 1299, 1302, 1436, 1509, 1523, 1619
ApoI RAATTY 4 cut(s) 1212, 1750, 1802, 1891
Asp700I GAANNNNTTC 2 cut(s) 1592, 1719
AspLEI GCGC 4 cut(s) 67, 394, 526, 1535
AspS9I GGNCC 3 cut(s) 255, 352, 558
AsuC2I CCSGG 1 cut(s) 170
AsuHPI GGTGA 5 cut(s) 115, 467, 475, 1796, 1866
AvaI CYCGRG 1 cut(s) 332
AvaII GGWCC 2 cut(s) 255, 352
BaeI ACNNNNGTAYC 2 cut(s) 1052, 1085
BanI GGYRCC 1 cut(s) 1155
BauI CACGAG 1 cut(s) 878
BbrPI CACGTG 1 cut(s) 445
BbsI GAAGAC 4 cut(s) 503, 1169, 1543, 1733
Bbv12I GWGCWC 3 cut(s) 1849, 1944, 1979
BbvCI CCTCAGC 1 cut(s) 1151
BbvI GCAGC 9 cut(s) 54, 215, 288, 1286, 1314, 1448, 1510, 1521, 1606
BccI CCATC 8 cut(s) 68, 92, 267, 397, 506, 1028, 1148, 1667
BceAI ACGGC 6 cut(s) 104, 250, 360, 518, 815, 1143
BcgI CGANNNNNNTGC 4 cut(s) 1817, 1851, 1931, 1965
BciT130I CCWGG 7 cut(s) 548, 556, 693, 1027, 1879, 1914, 1937
BciVI GTATCC 2 cut(s) 1454, 1551
BclI TGATCA 1 cut(s) 288
BcnI CCSGG 1 cut(s) 170
BcoDI GTCTC 3 cut(s) 107, 922, 1963
BfaI CTAG 2 cut(s) 872, 1038
BfmI CTRYAG 1 cut(s) 1300
BfoI RGCGCY 1 cut(s) 395
BfuAI ACCTGC 2 cut(s) 233, 306
BfuI GTATCC 2 cut(s) 1454, 1551
BglI GCCNNNNNGGC 1 cut(s) 56
BglII AGATCT 1 cut(s) 381
Bme1390I CCNGG 8 cut(s) 170, 548, 556, 693, 1027, 1879, 1914, 1937
Bme18I GGWCC 2 cut(s) 255, 352
BmeRI GACNNNNNGTC 1 cut(s) 89
BmeT110I CYCGRG 1 cut(s) 332
BmgBI CACGTC 2 cut(s) 175, 943
BmgT120I GGNCC 3 cut(s) 255, 352, 558
BmiI GGNNCC 5 cut(s) 256, 257, 368, 1017, 1157
BmrFI CCNGG 8 cut(s) 170, 548, 556, 693, 1027, 1879, 1914, 1937
BmsI GCATC 1 cut(s) 1403
BpiI GAAGAC 4 cut(s) 503, 1169, 1543, 1733
BpmI CTGGAG 1 cut(s) 946
Bpu10I CCTNAGC 3 cut(s) 250, 1151, 1686
BpuEI CTTGAG 1 cut(s) 1433
BpuMI CCSGG 1 cut(s) 170
BsaAI YACGTR 1 cut(s) 445
BsaHI GRCGYC 1 cut(s) 111
BsaI GGTCTC 1 cut(s) 107
BsaWI WCCGGW 1 cut(s) 354
BsaXI ACNNNNNCTCC 1 cut(s) 1966
Bsc4I CCNNNNNNNGG 9 cut(s) 175, 252, 339, 735, 1012, 1026, 1146, 1432, 1913
Bse1I ACTGG 4 cut(s) 30, 929, 1300, 1767
Bse3DI GCAATG 1 cut(s) 1944
BseBI CCWGG 7 cut(s) 548, 556, 693, 1027, 1879, 1914, 1937
BseGI GGATG 4 cut(s) 661, 690, 1140, 1418
BseLI CCNNNNNNNGG 9 cut(s) 175, 252, 339, 735, 1012, 1026, 1146, 1432, 1913
BseMI GCAATG 1 cut(s) 1944
BseMII CTCAG 4 cut(s) 264, 531, 1142, 1527
BseNI ACTGG 4 cut(s) 30, 929, 1300, 1767
BseRI GAGGAG 2 cut(s) 224, 1901
BseX3I CGGCCG 1 cut(s) 373
BseXI GCAGC 9 cut(s) 54, 215, 288, 1286, 1314, 1448, 1510, 1521, 1606
BseYI CCCAGC 2 cut(s) 1493, 1840
Bsh1236I CGCG 5 cut(s) 56, 65, 90, 1111, 1533
Bsh1285I CGRYCG 2 cut(s) 359, 376
BshFI GGCC 7 cut(s) 15, 59, 131, 375, 554, 559, 1454
BshNI GGYRCC 1 cut(s) 1155
BsiEI CGRYCG 2 cut(s) 359, 376
BsiHKAI GWGCWC 3 cut(s) 1849, 1944, 1979
BsiHKCI CYCGRG 1 cut(s) 332
BsiSI CCGG 3 cut(s) 170, 246, 355
BslFI GGGAC 3 cut(s) 241, 529, 1713
BslI CCNNNNNNNGG 9 cut(s) 175, 252, 339, 735, 1012, 1026, 1146, 1432, 1913
BsmAI GTCTC 3 cut(s) 107, 922, 1963
BsmBI CGTCTC 1 cut(s) 1963
BsmFI GGGAC 3 cut(s) 241, 529, 1713
BsmI GAATGC 2 cut(s) 853, 1828
BsnI GGCC 7 cut(s) 15, 59, 131, 375, 554, 559, 1454
Bso31I GGTCTC 1 cut(s) 107
BsoBI CYCGRG 1 cut(s) 332
Bsp1286I GDGCHC 3 cut(s) 1849, 1944, 1979
Bsp143I GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
Bsp19I CCATGG 1 cut(s) 1455
BspACI CCGC 9 cut(s) 48, 54, 56, 117, 407, 438, 551, 620, 1814
BspANI GGCC 7 cut(s) 15, 59, 131, 375, 554, 559, 1454
BspCNI CTCAG 4 cut(s) 263, 532, 1143, 1528
BspFNI CGCG 5 cut(s) 56, 65, 90, 1111, 1533
BspLI GGNNCC 5 cut(s) 256, 257, 368, 1017, 1157
BspMAI CTGCAG 1 cut(s) 1304
BspMI ACCTGC 2 cut(s) 233, 306
BspPI GGATC 3 cut(s) 757, 890, 1209
BspQI GCTCTTC 2 cut(s) 1263, 1386
BspT107I GGYRCC 1 cut(s) 1155
BspTNI GGTCTC 1 cut(s) 107
BsrDI GCAATG 1 cut(s) 1944
BsrI ACTGG 4 cut(s) 30, 929, 1300, 1767
BssMI GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
BssNI GRCGYC 1 cut(s) 111
BssSI CACGAG 1 cut(s) 878
BssT1I CCWWGG 4 cut(s) 126, 1405, 1455, 1623
Bst2BI CACGAG 1 cut(s) 878
Bst2UI CCWGG 7 cut(s) 548, 556, 693, 1027, 1879, 1914, 1937
Bst4CI ACNGT 3 cut(s) 520, 1065, 1355
Bst6I CTCTTC 3 cut(s) 1263, 1386, 1575
BstACI GRCGYC 1 cut(s) 111
BstBAI YACGTR 1 cut(s) 445
BstC8I GCNNGC 2 cut(s) 1287, 1951
BstDEI CTNAG 6 cut(s) 250, 540, 1032, 1151, 1536, 1686
BstDSI CCRYGG 2 cut(s) 54, 1455
BstENI CCTNNNNNAGG 1 cut(s) 1010
BstF5I GGATG 4 cut(s) 661, 690, 1140, 1418
BstFNI CGCG 5 cut(s) 56, 65, 90, 1111, 1533
BstH2I RGCGCY 1 cut(s) 395
BstHHI GCGC 4 cut(s) 67, 394, 526, 1535
BstKTI GATC 7 cut(s) 291, 384, 752, 877, 898, 1204, 1837
BstMAI GTCTC 3 cut(s) 107, 922, 1963
BstMBI GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
BstMCI CGRYCG 2 cut(s) 359, 376
BstMWI GCNNNNNNNGC 8 cut(s) 21, 56, 62, 234, 530, 1515, 1532, 1597
BstNI CCWGG 7 cut(s) 548, 556, 693, 1027, 1879, 1914, 1937
BstNSI RCATGY 1 cut(s) 1285
BstSCI CCNGG 8 cut(s) 168, 546, 554, 691, 1025, 1877, 1912, 1935
BstSFI CTRYAG 1 cut(s) 1300
BstUI CGCG 5 cut(s) 56, 65, 90, 1111, 1533
BstV1I GCAGC 9 cut(s) 54, 215, 288, 1286, 1314, 1448, 1510, 1521, 1606
BstV2I GAAGAC 4 cut(s) 503, 1169, 1543, 1733
BstX2I RGATCY 2 cut(s) 381, 1201
BstXI CCANNNNNNTGG 1 cut(s) 681
BstYI RGATCY 2 cut(s) 381, 1201
BstZI CGGCCG 1 cut(s) 373
BsuI GTATCC 2 cut(s) 1454, 1551
BsuRI GGCC 7 cut(s) 15, 59, 131, 375, 554, 559, 1454
BtgI CCRYGG 2 cut(s) 54, 1455
BtgZI GCGATG 1 cut(s) 46
BtrI CACGTC 2 cut(s) 175, 943
BtsCI GGATG 4 cut(s) 661, 690, 1140, 1418
BtsIMutI CAGTG 4 cut(s) 537, 1101, 1293, 1360
BveI ACCTGC 2 cut(s) 233, 306
Cac8I GCNNGC 2 cut(s) 1287, 1951
CfoI GCGC 4 cut(s) 67, 394, 526, 1535
Cfr13I GGNCC 3 cut(s) 255, 352, 558
Cfr42I CCGCGG 1 cut(s) 57
CpoI CGGWCCG 1 cut(s) 352
CseI GACGC 4 cut(s) 79, 96, 119, 1100
CsiI ACCWGGT 1 cut(s) 691
Csp6I GTAC 2 cut(s) 295, 1694
CspI CGGWCCG 1 cut(s) 352
CviAII CATG 7 cut(s) 637, 779, 1282, 1456, 1519, 1681, 1794
CviQI GTAC 2 cut(s) 295, 1694
DdeI CTNAG 6 cut(s) 250, 540, 1032, 1151, 1536, 1686
DpnI GATC 7 cut(s) 290, 383, 751, 876, 897, 1203, 1836
DpnII GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
DraI TTTAAA 1 cut(s) 910
DriI GACNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 3 cut(s) 57, 373, 552
EagI CGGCCG 1 cut(s) 373
Eam1104I CTCTTC 3 cut(s) 1263, 1386, 1575
Eam1105I GACNNNNNGTC 1 cut(s) 89
EarI CTCTTC 3 cut(s) 1263, 1386, 1575
EciI GGCGGA 2 cut(s) 106, 453
EclXI CGGCCG 1 cut(s) 373
Eco130I CCWWGG 4 cut(s) 126, 1405, 1455, 1623
Eco31I GGTCTC 1 cut(s) 107
Eco47I GGWCC 2 cut(s) 255, 352
Eco52I CGGCCG 1 cut(s) 373
Eco57I CTGAAG 4 cut(s) 515, 1031, 1794, 1976
Eco72I CACGTG 1 cut(s) 445
Eco88I CYCGRG 1 cut(s) 332
EcoNI CCTNNNNNAGG 1 cut(s) 1010
EcoO109I RGGNCCY 1 cut(s) 255
EcoRII CCWGG 7 cut(s) 546, 554, 691, 1025, 1877, 1912, 1935
EcoT14I CCWWGG 4 cut(s) 126, 1405, 1455, 1623
EcoT22I ATGCAT 1 cut(s) 719
ErhI CCWWGG 4 cut(s) 126, 1405, 1455, 1623
Esp3I CGTCTC 1 cut(s) 1963
FaeI CATG 7 cut(s) 640, 782, 1285, 1459, 1522, 1684, 1797
FalI AAGNNNNNCTT 2 cut(s) 1269, 1301
FaqI GGGAC 3 cut(s) 241, 529, 1713
FatI CATG 7 cut(s) 636, 778, 1281, 1455, 1518, 1680, 1793
FauNDI CATATG 1 cut(s) 1852
FbaI TGATCA 1 cut(s) 288
FokI GGATG 4 cut(s) 668, 697, 1127, 1425
FspBI CTAG 2 cut(s) 872, 1038
GlaI GCGC 4 cut(s) 66, 393, 525, 1534
GsaI CCCAGC 2 cut(s) 1497, 1844
GsuI CTGGAG 1 cut(s) 946
HaeII RGCGCY 1 cut(s) 395
HaeIII GGCC 7 cut(s) 15, 59, 131, 375, 554, 559, 1454
HapII CCGG 3 cut(s) 170, 246, 355
HgaI GACGC 4 cut(s) 79, 96, 119, 1100
HhaI GCGC 4 cut(s) 67, 394, 526, 1535
Hin1I GRCGYC 1 cut(s) 111
Hin1II CATG 7 cut(s) 640, 782, 1285, 1459, 1522, 1684, 1797
Hin6I GCGC 4 cut(s) 65, 392, 524, 1533
HinP1I GCGC 4 cut(s) 65, 392, 524, 1533
HincII GTYRAC 2 cut(s) 948, 1768
HindII GTYRAC 2 cut(s) 948, 1768
HpaI GTTAAC 1 cut(s) 948
HpaII CCGG 3 cut(s) 170, 246, 355
HphI GGTGA 5 cut(s) 115, 467, 475, 1796, 1866
Hpy166II GTNNAC 4 cut(s) 466, 948, 1095, 1768
Hpy188III TCNNGA 4 cut(s) 332, 674, 878, 1340
Hpy8I GTNNAC 4 cut(s) 466, 948, 1095, 1768
Hpy99I CGWCG 4 cut(s) 10, 90, 95, 1401
HpyAV CCTTC 6 cut(s) 1006, 1016, 1363, 1476, 1603, 1709
HpyCH4III ACNGT 3 cut(s) 520, 1065, 1355
HpyCH4IV ACGT 5 cut(s) 153, 174, 444, 500, 942
HpyF10VI GCNNNNNNNGC 8 cut(s) 21, 56, 62, 234, 530, 1515, 1532, 1597
HpyF3I CTNAG 6 cut(s) 250, 540, 1032, 1151, 1536, 1686
HpySE526I ACGT 5 cut(s) 153, 174, 444, 500, 942
Hsp92I GRCGYC 1 cut(s) 111
Hsp92II CATG 7 cut(s) 640, 782, 1285, 1459, 1522, 1684, 1797
HspAI GCGC 4 cut(s) 65, 392, 524, 1533
KflI GGGWCCC 1 cut(s) 255
Ksp22I TGATCA 1 cut(s) 288
KspAI GTTAAC 1 cut(s) 948
KspI CCGCGG 1 cut(s) 57
Kzo9I GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
LguI GCTCTTC 2 cut(s) 1263, 1386
LmnI GCTCC 4 cut(s) 1021, 1844, 1939, 1974
Lsp1109I GCAGC 9 cut(s) 54, 215, 288, 1286, 1314, 1448, 1510, 1521, 1606
LweI GCATC 1 cut(s) 1403
MabI ACCWGGT 1 cut(s) 691
MaeI CTAG 2 cut(s) 872, 1038
MaeII ACGT 5 cut(s) 153, 174, 444, 500, 942
MaeIII GTNAC 7 cut(s) 121, 501, 535, 698, 986, 1816, 1872
MalI GATC 7 cut(s) 290, 383, 751, 876, 897, 1203, 1836
MboI GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
MflI RGATCY 2 cut(s) 381, 1201
MhlI GDGCHC 3 cut(s) 1849, 1944, 1979
MluCI AATT 5 cut(s) 1165, 1212, 1750, 1802, 1891
MluI ACGCGT 1 cut(s) 88
MlyI GAGTC 3 cut(s) 890, 1395, 1880
MmeI TCCRAC 2 cut(s) 65, 1863
Mph1103I ATGCAT 1 cut(s) 719
MroXI GAANNNNTTC 2 cut(s) 1592, 1719
MseI TTAA 9 cut(s) 18, 165, 708, 909, 947, 1229, 1265, 1359, 1734
MslI CAYNNNNRTG 2 cut(s) 783, 941
MspA1I CMGCKG 2 cut(s) 56, 1814
MspI CCGG 3 cut(s) 170, 246, 355
MspR9I CCNGG 8 cut(s) 170, 548, 556, 693, 1027, 1879, 1914, 1937
Mva1269I GAATGC 2 cut(s) 853, 1828
MvaI CCWGG 7 cut(s) 548, 556, 693, 1027, 1879, 1914, 1937
MvnI CGCG 5 cut(s) 56, 65, 90, 1111, 1533
MwoI GCNNNNNNNGC 8 cut(s) 21, 56, 62, 234, 530, 1515, 1532, 1597
NciI CCSGG 1 cut(s) 170
NcoI CCATGG 1 cut(s) 1455
NdeI CATATG 1 cut(s) 1852
NdeII GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
NlaIII CATG 7 cut(s) 640, 782, 1285, 1459, 1522, 1684, 1797
NlaIV GGNNCC 5 cut(s) 256, 257, 368, 1017, 1157
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 4 cut(s) 121, 535, 698, 1872
NsiI ATGCAT 1 cut(s) 719
NspI RCATGY 1 cut(s) 1285
PciSI GCTCTTC 2 cut(s) 1263, 1386
PcsI WCGNNNNNNNCGW 2 cut(s) 117, 213
PctI GAATGC 2 cut(s) 853, 1828
PdmI GAANNNNTTC 2 cut(s) 1592, 1719
PflMI CCANNNNNTGG 1 cut(s) 1026
PleI GAGTC 3 cut(s) 889, 1395, 1879
PmaCI CACGTG 1 cut(s) 445
PmlI CACGTG 1 cut(s) 445
PpsI GAGTC 3 cut(s) 889, 1395, 1879
Ppu21I YACGTR 1 cut(s) 445
PpuMI RGGWCCY 1 cut(s) 255
Psp1406I AACGTT 1 cut(s) 153
Psp5II RGGWCCY 1 cut(s) 255
Psp6I CCWGG 7 cut(s) 546, 554, 691, 1025, 1877, 1912, 1935
PspCI CACGTG 1 cut(s) 445
PspFI CCCAGC 2 cut(s) 1493, 1840
PspGI CCWGG 7 cut(s) 546, 554, 691, 1025, 1877, 1912, 1935
PspN4I GGNNCC 5 cut(s) 256, 257, 368, 1017, 1157
PspPI GGNCC 3 cut(s) 255, 352, 558
PspPPI RGGWCCY 1 cut(s) 255
PstI CTGCAG 1 cut(s) 1304
PsuI RGATCY 2 cut(s) 381, 1201
RsaI GTAC 2 cut(s) 296, 1695
RsaNI GTAC 2 cut(s) 295, 1694
RseI CAYNNNNRTG 2 cut(s) 783, 941
Rsr2I CGGWCCG 1 cut(s) 352
RsrII CGGWCCG 1 cut(s) 352
SacII CCGCGG 1 cut(s) 57
SapI GCTCTTC 2 cut(s) 1263, 1386
SaqAI TTAA 9 cut(s) 18, 165, 708, 909, 947, 1229, 1265, 1359, 1734
Sau3AI GATC 7 cut(s) 288, 381, 749, 874, 895, 1201, 1834
Sau96I GGNCC 3 cut(s) 255, 352, 558
SchI GAGTC 3 cut(s) 890, 1395, 1880
ScrFI CCNGG 8 cut(s) 170, 548, 556, 693, 1027, 1879, 1914, 1937
SduI GDGCHC 3 cut(s) 1849, 1944, 1979
SexAI ACCWGGT 1 cut(s) 691
SfaNI GCATC 1 cut(s) 1403
SfcI CTRYAG 1 cut(s) 1300
Sfr303I CCGCGG 1 cut(s) 57
SgrBI CCGCGG 1 cut(s) 57
SinI GGWCC 2 cut(s) 255, 352
SmiMI CAYNNNNRTG 2 cut(s) 783, 941
SmlI CTYRAG 1 cut(s) 1448
SmoI CTYRAG 1 cut(s) 1448
Sse9I AATT 5 cut(s) 1165, 1212, 1750, 1802, 1891
SsiI CCGC 9 cut(s) 48, 54, 56, 117, 407, 438, 551, 620, 1814
SspMI CTAG 2 cut(s) 872, 1038
StyD4I CCNGG 8 cut(s) 168, 546, 554, 691, 1025, 1877, 1912, 1935
StyI CCWWGG 4 cut(s) 126, 1405, 1455, 1623
TaaI ACNGT 3 cut(s) 520, 1065, 1355
TaiI ACGT 5 cut(s) 156, 177, 447, 503, 945
TaqI TCGA 7 cut(s) 26, 724, 752, 969, 1180, 1469, 1858
TaqII GACCGA 1 cut(s) 340
TasI AATT 5 cut(s) 1165, 1212, 1750, 1802, 1891
TatI WGTACW 1 cut(s) 1693
TauI GCSGC 2 cut(s) 59, 554
Tru1I TTAA 9 cut(s) 18, 165, 708, 909, 947, 1229, 1265, 1359, 1734
Tru9I TTAA 9 cut(s) 18, 165, 708, 909, 947, 1229, 1265, 1359, 1734
TscAI CASTG 4 cut(s) 544, 1108, 1300, 1360
TseFI GTSAC 4 cut(s) 121, 535, 698, 1872
TseI GCWGC 9 cut(s) 67, 228, 301, 1299, 1302, 1436, 1509, 1523, 1619
Tsp45I GTSAC 4 cut(s) 121, 535, 698, 1872
TspDTI ATGAA 8 cut(s) 672, 701, 767, 860, 925, 1250, 1728, 1977
TspGWI ACGGA 3 cut(s) 122, 488, 1987
TspRI CASTG 4 cut(s) 544, 1108, 1300, 1360
Van91I CCANNNNNTGG 1 cut(s) 1026
VpaK11BI GGWCC 2 cut(s) 255, 352
XagI CCTNNNNNAGG 1 cut(s) 1010
XapI RAATTY 4 cut(s) 1212, 1750, 1802, 1891
XceI RCATGY 1 cut(s) 1285
XcmI CCANNNNNNNNNTGG 1 cut(s) 649
XmnI GAANNNNTTC 2 cut(s) 1592, 1719
XspI CTAG 2 cut(s) 872, 1038
Zsp2I ATGCAT 1 cut(s) 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.