Rh3BG131600

At1g04910-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0014239
Physical Location & Seq
Forward (+)
11108972 .. 11112079
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG131600.1

Sequence Viewer

Length: 1986 bp
ATGTCGTCGGGTGGCCTTAATAACACGGCCGGTAATGCCCCGACCACCGCCTCGGCCGCCATCGCGCTGCCCACTACGACCAGACGACGCGTCGCCGATGGCGTCATGGACGCCTCCGCCGCCACCTTGGCCTCACCGACCAACATCATCAACGTAGGCAAGATAAACCCGGACGCGGTTGTTTCCTCGGCGGACGAGGACGAGGAGAGCGGCCCGACCTGCTGCAACGGCTCTATGTCCGGCGCCGGGTCCCACCTCCACAGCAACCATTATTCTCCCGTGATCAAGTACCTGCTGCTTCGCAGGAGAGTGTTCTTTTGTGTTCCCGAGGCGTGGCTGTTGTCGGTCCGGTCGGGGAGGAACCTCGGCAGGAAGATCTTCGGGGCGCTAATGTTGATGGCGGTTGTTTCTGTGTTCTTCGCGTTTCTGGGCGGCCACGTGGAGGTTGGTGATAGGGTGAACAGGACGGAGGGGAGGCTTTTGATTCTGGCGACGTTACAAGATGATGGGACGGTGGCGCAACACGCCGTCACTGAGAACCAGGCGGCCAGGCCCAAACGGGTTTTTGAGAGAATGTCGTTATCGGAATCGGAATCGGAATCGGAATCGGAAGCGGAACCGGAATCCTCCATGCCCAAACGTCTTTTGGACCAACAGAATACGATTCCAGAAATATGGATGAAACCAAATAGTGACGATTTTAACAAATGCATAGCTCGACCCAGAAATCGGATAAGAACAGGATCGAAAACAAATGGCTATCTCCTTGTTCATGCCAATGGTGGATTGAATCAAATGAGAACAGGGATATGTGATATGGTAGCCGTTGCAAGGATAATGAATGCTACTCTGGTGCTTCCTTATCTAGATCACGAGTCTTTTTGGACTGATCCAAGTGGTTTTAAAGATATATTTGACTGGAGACACTTCATAGACGTGTTAACAGATGATATTGAGATAATCGAGTATTTGCCAACCCGTTATGCAGCTCAAAAGCCCCTTCTGAAGGCTCCCATCTCCTGGTCTAAGGCTAGTTATTACAGAAAAGAAATGATACCGTTGTTGAAAAAGCATAAGGTTGTAAAGTTTACCCACACTGATTCGCGTCTTGCTAATAATGGACTTGCAAGTTCCATCCAAAGGTTGAGGTGCCGTGCCAATTATGAGGGTCTTCGATATACAAAGGAGATTGAGGATCTTGGGAAAGTTTTGGTCAATAGATTAAGGAACAATGGCAATCCATATATTGCTCTTCATTTAAGATATGAGAAAGACATGCTTGCTTTCACTGGCTGCAGCCACAACCTTACTGCAAAGGAAGATGAGGAACTTCGGGATATGAGATACAGTGTTAAACATTGGAAGGAGAAAGAGATAGATAGTGAAGAGCGACGACTCCAAGGTGGATGCCCATTTTCCCCCAGAGAGGCAGCCCTGTTCCTCAAGGCCATGGGATACCCGTCGACAACAACAATCTACATTGTTGCTGGGGAGATATATGGCAGCAATAGCATGGCTGCATTTCGCTCTGAGTATCCTAATGTCTTCTCCCATAACACTCTTGCAACAGAAGAAGAGTTGAGGCCCTTCAAGCCATATCAAAATCGCCTTGCTGCCTTGGATTACATAGTAGCATTAGAGAGTGATGTCTTTGTATATACATACGATGGAAACATGGCTAAGGCAGTACAAGGACATAGAAGATATGAAGGATTTCGGAAGACTATTAACCCTGACAGACAAAATTTTGTGAAACTGGTTGACCTATTGGATAAGGGTGATTTATCATGGGAAGAATTTTCTTCAGCGGTTACAACTCTGCATTCTGATCGGCTGGGAGCACCATATGTTCGACAGATAGGAGAGTCACCCAGGTTGGAGGAGAATTTTTATGCAAATCCTTTCCCTGGTTGTATCTGTAACAACTCCCAGGAGCACATTGCTCGCCTGAAATCCGATGAGAGACGGAGCACAAGTGTTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

661

Amino Acids

74.25

Weight (kDa)

7.95

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 254 - 570 9e-107 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014239)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37980 AT5G01100
fragaria_vesca FvH4_6g12260
malus_domestica MD04G1144500.v1.1 MD12G1158500.v1.1
prunus_persica Prupe.6G268900_v2.0.a1
pyrus_communis pycom05g13890 pycom12g15050
rosa_chinensis RchiOBHm_Chr3g0464061
rosa_laevigata RLG00000024725
rosa_multiflora Rmu_sc0006492.1_g000019
rosa_roxburghii Rroxscaffold_6G00416010
rosa_rugosa Rorug03G0070500
rosa_samantha Rh3BG131600 Rh3CG133900 Rh3DG132900
rosa_wichuraiana Rw3G010760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 227, 300
AccB1I GGYRCC 2 cut(s) 242, 1149
AccB7I CCANNNNNTGG 1 cut(s) 1020
AccBSI CCGCTC 1 cut(s) 210
AccI GTMKAC 1 cut(s) 1463
AccII CGCG 5 cut(s) 65, 90, 176, 422, 1105
AclWI GGATC 3 cut(s) 751, 884, 1203
AcoI YGGCCR 4 cut(s) 27, 54, 433, 546
AcsI RAATTY 3 cut(s) 1744, 1796, 1885
AcuI CTGAAG 2 cut(s) 1025, 1788
AcvI CACGTG 1 cut(s) 439
AcyI GRCGYC 3 cut(s) 102, 111, 243
AfaI GTAC 2 cut(s) 290, 1689
AflIII ACRYGT 2 cut(s) 88, 936
AgsI TTSAA 3 cut(s) 790, 1066, 1591
AhdI GACNNNNNGTC 1 cut(s) 89
AjiI CACGTC 1 cut(s) 937
AjnI CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
AluBI AGCT 2 cut(s) 716, 989
AluI AGCT 2 cut(s) 716, 989
Alw21I GWGCWC 3 cut(s) 1843, 1938, 1973
Alw26I GTCTC 2 cut(s) 916, 1957
AlwI GGATC 3 cut(s) 751, 884, 1203
Ama87I CYCGRG 1 cut(s) 326
ApoI RAATTY 3 cut(s) 1744, 1796, 1885
Asp700I GAANNNNTTC 2 cut(s) 377, 1713
AspLEI GCGC 4 cut(s) 67, 245, 388, 520
AspS9I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
AsuC2I CCSGG 2 cut(s) 170, 247
AsuHPI GGTGA 5 cut(s) 126, 461, 469, 1790, 1860
AvaI CYCGRG 1 cut(s) 326
AvaII GGWCC 3 cut(s) 249, 346, 649
BaeI ACNNNNGTAYC 2 cut(s) 1046, 1079
BanI GGYRCC 2 cut(s) 242, 1149
BauI CACGAG 1 cut(s) 872
BbrPI CACGTG 1 cut(s) 439
BbsI GAAGAC 3 cut(s) 1163, 1537, 1727
Bbv12I GWGCWC 3 cut(s) 1843, 1938, 1973
BccI CCATC 7 cut(s) 68, 92, 391, 500, 1022, 1142, 1661
BceAI ACGGC 5 cut(s) 42, 244, 512, 809, 1137
BcgI CGANNNNNNTGC 4 cut(s) 1811, 1845, 1925, 1959
BciT130I CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
BciVI GTATCC 2 cut(s) 1448, 1545
BclI TGATCA 1 cut(s) 282
BcnI CCSGG 2 cut(s) 170, 247
BcoDI GTCTC 2 cut(s) 916, 1957
BfaI CTAG 2 cut(s) 866, 1032
BfmI CTRYAG 1 cut(s) 1294
BfoI RGCGCY 2 cut(s) 246, 389
BfuAI ACCTGC 2 cut(s) 227, 300
BfuI GTATCC 2 cut(s) 1448, 1545
BglI GCCNNNNNGGC 1 cut(s) 128
BglII AGATCT 1 cut(s) 375
Bme1390I CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
Bme18I GGWCC 3 cut(s) 249, 346, 649
BmeRI GACNNNNNGTC 1 cut(s) 89
BmeT110I CYCGRG 1 cut(s) 326
BmgBI CACGTC 1 cut(s) 937
BmgT120I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
BmiI GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
BmrFI CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
BmsI GCATC 1 cut(s) 1397
BpiI GAAGAC 3 cut(s) 1163, 1537, 1727
BpmI CTGGAG 1 cut(s) 940
Bpu10I CCTNAGC 1 cut(s) 1680
BpuEI CTTGAG 1 cut(s) 1427
BpuMI CCSGG 2 cut(s) 170, 247
BsaAI YACGTR 1 cut(s) 439
BsaHI GRCGYC 3 cut(s) 102, 111, 243
BsaWI WCCGGW 2 cut(s) 348, 619
BsaXI ACNNNNNCTCC 1 cut(s) 1960
Bse118I RCCGGY 1 cut(s) 29
Bse1I ACTGG 3 cut(s) 923, 1294, 1761
Bse3DI GCAATG 1 cut(s) 1938
BseBI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
BseGI GGATG 3 cut(s) 684, 1134, 1412
BseMI GCAATG 1 cut(s) 1938
BseMII CTCAG 2 cut(s) 525, 1521
BseNI ACTGG 3 cut(s) 923, 1294, 1761
BseRI GAGGAG 2 cut(s) 218, 1895
BseX3I CGGCCG 2 cut(s) 27, 54
BseYI CCCAGC 2 cut(s) 1487, 1834
Bsh1236I CGCG 5 cut(s) 65, 90, 176, 422, 1105
Bsh1285I CGRYCG 3 cut(s) 30, 57, 353
BshNI GGYRCC 2 cut(s) 242, 1149
BsiEI CGRYCG 3 cut(s) 30, 57, 353
BsiHKAI GWGCWC 3 cut(s) 1843, 1938, 1973
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
BslFI GGGAC 2 cut(s) 235, 523
BsmAI GTCTC 2 cut(s) 916, 1957
BsmBI CGTCTC 1 cut(s) 1957
BsmFI GGGAC 2 cut(s) 235, 523
BsmI GAATGC 2 cut(s) 847, 1822
BsoBI CYCGRG 1 cut(s) 326
Bsp1286I GDGCHC 3 cut(s) 1843, 1938, 1973
Bsp143I GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
Bsp19I CCATGG 1 cut(s) 1449
BspCNI CTCAG 2 cut(s) 526, 1522
BspFNI CGCG 5 cut(s) 65, 90, 176, 422, 1105
BspLI GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
BspMAI CTGCAG 1 cut(s) 1298
BspMI ACCTGC 2 cut(s) 227, 300
BspPI GGATC 3 cut(s) 751, 884, 1203
BspQI GCTCTTC 2 cut(s) 1257, 1380
BspT107I GGYRCC 2 cut(s) 242, 1149
BsrBI CCGCTC 1 cut(s) 210
BsrDI GCAATG 1 cut(s) 1938
BsrFI RCCGGY 1 cut(s) 29
BsrI ACTGG 3 cut(s) 923, 1294, 1761
BssAI RCCGGY 1 cut(s) 29
BssMI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
BssNI GRCGYC 3 cut(s) 102, 111, 243
BssSI CACGAG 1 cut(s) 872
BssT1I CCWWGG 4 cut(s) 126, 1399, 1449, 1617
Bst2BI CACGAG 1 cut(s) 872
Bst2UI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
Bst4CI ACNGT 3 cut(s) 514, 1059, 1349
Bst6I CTCTTC 3 cut(s) 1257, 1380, 1569
BstACI GRCGYC 3 cut(s) 102, 111, 243
BstBAI YACGTR 1 cut(s) 439
BstC8I GCNNGC 2 cut(s) 1281, 1945
BstDEI CTNAG 4 cut(s) 534, 1026, 1530, 1680
BstDSI CCRYGG 1 cut(s) 1449
BstENI CCTNNNNNAGG 1 cut(s) 1004
BstF5I GGATG 3 cut(s) 684, 1134, 1412
BstFNI CGCG 5 cut(s) 65, 90, 176, 422, 1105
BstH2I RGCGCY 2 cut(s) 246, 389
BstHHI GCGC 4 cut(s) 67, 245, 388, 520
BstKTI GATC 7 cut(s) 285, 378, 746, 871, 892, 1198, 1831
BstMAI GTCTC 2 cut(s) 916, 1957
BstMBI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
BstMCI CGRYCG 3 cut(s) 30, 57, 353
BstNI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
BstNSI RCATGY 1 cut(s) 1279
BstSCI CCNGG 8 cut(s) 168, 245, 540, 548, 1019, 1871, 1906, 1929
BstSFI CTRYAG 1 cut(s) 1294
BstUI CGCG 5 cut(s) 65, 90, 176, 422, 1105
BstV2I GAAGAC 3 cut(s) 1163, 1537, 1727
BstX2I RGATCY 2 cut(s) 375, 1195
BstXI CCANNNNNNTGG 1 cut(s) 675
BstYI RGATCY 2 cut(s) 375, 1195
BstZI CGGCCG 2 cut(s) 27, 54
BsuI GTATCC 2 cut(s) 1448, 1545
BtgI CCRYGG 1 cut(s) 1449
BtgZI GCGATG 1 cut(s) 46
BtrI CACGTC 1 cut(s) 937
BtsCI GGATG 3 cut(s) 684, 1134, 1412
BtsIMutI CAGTG 4 cut(s) 531, 1095, 1287, 1354
BveI ACCTGC 2 cut(s) 227, 300
Cac8I GCNNGC 2 cut(s) 1281, 1945
CfoI GCGC 4 cut(s) 67, 245, 388, 520
Cfr10I RCCGGY 1 cut(s) 29
Cfr13I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
CpoI CGGWCCG 1 cut(s) 346
CseI GACGC 6 cut(s) 79, 91, 96, 119, 182, 1094
Csp6I GTAC 2 cut(s) 289, 1688
CspI CGGWCCG 1 cut(s) 346
CviAII CATG 8 cut(s) 106, 631, 773, 1276, 1450, 1513, 1675, 1788
CviQI GTAC 2 cut(s) 289, 1688
DdeI CTNAG 4 cut(s) 534, 1026, 1530, 1680
DinI GGCGCC 1 cut(s) 244
DpnI GATC 7 cut(s) 284, 377, 745, 870, 891, 1197, 1830
DpnII GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
DraI TTTAAA 1 cut(s) 904
DriI GACNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 4 cut(s) 27, 54, 433, 546
EagI CGGCCG 2 cut(s) 27, 54
Eam1104I CTCTTC 3 cut(s) 1257, 1380, 1569
Eam1105I GACNNNNNGTC 1 cut(s) 89
EarI CTCTTC 3 cut(s) 1257, 1380, 1569
EciI GGCGGA 2 cut(s) 106, 206
EclXI CGGCCG 2 cut(s) 27, 54
Eco130I CCWWGG 4 cut(s) 126, 1399, 1449, 1617
Eco47I GGWCC 3 cut(s) 249, 346, 649
Eco52I CGGCCG 2 cut(s) 27, 54
Eco57I CTGAAG 2 cut(s) 1025, 1788
Eco72I CACGTG 1 cut(s) 439
Eco88I CYCGRG 1 cut(s) 326
EcoNI CCTNNNNNAGG 1 cut(s) 1004
EcoO109I RGGNCCY 2 cut(s) 249, 1584
EcoRII CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
EcoT14I CCWWGG 4 cut(s) 126, 1399, 1449, 1617
EcoT22I ATGCAT 1 cut(s) 713
EgeI GGCGCC 1 cut(s) 244
EheI GGCGCC 1 cut(s) 244
ErhI CCWWGG 4 cut(s) 126, 1399, 1449, 1617
Esp3I CGTCTC 1 cut(s) 1957
FaeI CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
FalI AAGNNNNNCTT 2 cut(s) 1263, 1295
FaqI GGGAC 2 cut(s) 235, 523
FatI CATG 8 cut(s) 105, 630, 772, 1275, 1449, 1512, 1674, 1787
FauNDI CATATG 1 cut(s) 1846
FbaI TGATCA 1 cut(s) 282
FblI GTMKAC 1 cut(s) 1463
FokI GGATG 3 cut(s) 691, 1121, 1419
FspBI CTAG 2 cut(s) 866, 1032
GlaI GCGC 4 cut(s) 66, 244, 387, 519
GsaI CCCAGC 2 cut(s) 1491, 1838
GsuI CTGGAG 1 cut(s) 940
HaeII RGCGCY 2 cut(s) 246, 389
HapII CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
HgaI GACGC 6 cut(s) 79, 91, 96, 119, 182, 1094
HhaI GCGC 4 cut(s) 67, 245, 388, 520
Hin1I GRCGYC 3 cut(s) 102, 111, 243
Hin1II CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
Hin6I GCGC 4 cut(s) 65, 243, 386, 518
HinP1I GCGC 4 cut(s) 65, 243, 386, 518
HincII GTYRAC 3 cut(s) 942, 1464, 1762
HindII GTYRAC 3 cut(s) 942, 1464, 1762
HpaI GTTAAC 1 cut(s) 942
HpaII CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
HphI GGTGA 5 cut(s) 126, 461, 469, 1790, 1860
Hpy166II GTNNAC 5 cut(s) 460, 942, 1089, 1464, 1762
Hpy188III TCNNGA 5 cut(s) 326, 668, 866, 872, 1334
Hpy8I GTNNAC 5 cut(s) 460, 942, 1089, 1464, 1762
Hpy99I CGWCG 6 cut(s) 10, 90, 95, 496, 1395, 1465
HpyAV CCTTC 5 cut(s) 1000, 1010, 1357, 1597, 1703
HpyCH4III ACNGT 3 cut(s) 514, 1059, 1349
HpyCH4IV ACGT 5 cut(s) 153, 438, 494, 640, 936
HpyF3I CTNAG 4 cut(s) 534, 1026, 1530, 1680
HpySE526I ACGT 5 cut(s) 153, 438, 494, 640, 936
Hsp92I GRCGYC 3 cut(s) 102, 111, 243
Hsp92II CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
HspAI GCGC 4 cut(s) 65, 243, 386, 518
KasI GGCGCC 1 cut(s) 242
KflI GGGWCCC 1 cut(s) 249
Ksp22I TGATCA 1 cut(s) 282
KspAI GTTAAC 1 cut(s) 942
Kzo9I GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
LguI GCTCTTC 2 cut(s) 1257, 1380
LmnI GCTCC 4 cut(s) 1015, 1838, 1933, 1968
LweI GCATC 1 cut(s) 1397
MaeI CTAG 2 cut(s) 866, 1032
MaeII ACGT 5 cut(s) 153, 438, 494, 640, 936
MaeIII GTNAC 6 cut(s) 495, 529, 692, 1810, 1866, 1919
MalI GATC 7 cut(s) 284, 377, 745, 870, 891, 1197, 1830
MbiI CCGCTC 1 cut(s) 210
MboI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
MflI RGATCY 2 cut(s) 375, 1195
MhlI GDGCHC 3 cut(s) 1843, 1938, 1973
MluCI AATT 4 cut(s) 1159, 1744, 1796, 1885
MluI ACGCGT 1 cut(s) 88
Mly113I GGCGCC 1 cut(s) 243
MlyI GAGTC 3 cut(s) 884, 1389, 1874
MmeI TCCRAC 1 cut(s) 1857
Mph1103I ATGCAT 1 cut(s) 713
MroXI GAANNNNTTC 2 cut(s) 377, 1713
MseI TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
MslI CAYNNNNRTG 2 cut(s) 777, 935
MspA1I CMGCKG 1 cut(s) 1808
MspI CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
MspR9I CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
Mva1269I GAATGC 2 cut(s) 847, 1822
MvaI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
MvnI CGCG 5 cut(s) 65, 90, 176, 422, 1105
NarI GGCGCC 1 cut(s) 243
NciI CCSGG 2 cut(s) 170, 247
NcoI CCATGG 1 cut(s) 1449
NdeI CATATG 1 cut(s) 1846
NdeII GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
NlaIII CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
NlaIV GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
NmeAIII GCCGAG 3 cut(s) 32, 167, 345
NmuCI GTSAC 3 cut(s) 529, 692, 1866
NsiI ATGCAT 1 cut(s) 713
NspI RCATGY 1 cut(s) 1279
PciSI GCTCTTC 2 cut(s) 1257, 1380
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PctI GAATGC 2 cut(s) 847, 1822
PdmI GAANNNNTTC 2 cut(s) 377, 1713
PfeI GAWTC 9 cut(s) 484, 587, 593, 599, 605, 623, 664, 790, 1100
PflMI CCANNNNNTGG 1 cut(s) 1020
PleI GAGTC 3 cut(s) 883, 1389, 1873
PluTI GGCGCC 1 cut(s) 246
PmaCI CACGTG 1 cut(s) 439
PmlI CACGTG 1 cut(s) 439
PpsI GAGTC 3 cut(s) 883, 1389, 1873
Ppu21I YACGTR 1 cut(s) 439
PpuMI RGGWCCY 1 cut(s) 249
Psp5II RGGWCCY 1 cut(s) 249
Psp6I CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
PspCI CACGTG 1 cut(s) 439
PspFI CCCAGC 2 cut(s) 1487, 1834
PspGI CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
PspN4I GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
PspPI GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
PspPPI RGGWCCY 1 cut(s) 249
PstI CTGCAG 1 cut(s) 1298
PsuI RGATCY 2 cut(s) 375, 1195
RsaI GTAC 2 cut(s) 290, 1689
RsaNI GTAC 2 cut(s) 289, 1688
RseI CAYNNNNRTG 2 cut(s) 777, 935
Rsr2I CGGWCCG 1 cut(s) 346
RsrII CGGWCCG 1 cut(s) 346
SalI GTCGAC 1 cut(s) 1462
SapI GCTCTTC 2 cut(s) 1257, 1380
SaqAI TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
Sau3AI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
Sau96I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
SchI GAGTC 3 cut(s) 884, 1389, 1874
ScrFI CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
SduI GDGCHC 3 cut(s) 1843, 1938, 1973
SfaNI GCATC 1 cut(s) 1397
SfcI CTRYAG 1 cut(s) 1294
SfoI GGCGCC 1 cut(s) 244
SinI GGWCC 3 cut(s) 249, 346, 649
SmiMI CAYNNNNRTG 2 cut(s) 777, 935
SmlI CTYRAG 1 cut(s) 1442
SmoI CTYRAG 1 cut(s) 1442
Sse9I AATT 4 cut(s) 1159, 1744, 1796, 1885
SspDI GGCGCC 1 cut(s) 242
SspMI CTAG 2 cut(s) 866, 1032
StyD4I CCNGG 8 cut(s) 168, 245, 540, 548, 1019, 1871, 1906, 1929
StyI CCWWGG 4 cut(s) 126, 1399, 1449, 1617
TaaI ACNGT 3 cut(s) 514, 1059, 1349
TaiI ACGT 5 cut(s) 156, 441, 497, 643, 939
TaqI TCGA 6 cut(s) 718, 746, 963, 1174, 1463, 1852
TaqII GACCGA 1 cut(s) 334
TasI AATT 4 cut(s) 1159, 1744, 1796, 1885
TatI WGTACW 1 cut(s) 1687
TauI GCSGC 5 cut(s) 59, 122, 213, 435, 548
TfiI GAWTC 9 cut(s) 484, 587, 593, 599, 605, 623, 664, 790, 1100
Tru1I TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
Tru9I TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
TscAI CASTG 4 cut(s) 538, 1102, 1294, 1354
TseFI GTSAC 3 cut(s) 529, 692, 1866
Tsp45I GTSAC 3 cut(s) 529, 692, 1866
TspDTI ATGAA 7 cut(s) 695, 761, 854, 919, 1244, 1722, 1971
TspGWI ACGGA 2 cut(s) 482, 1981
TspRI CASTG 4 cut(s) 538, 1102, 1294, 1354
Van91I CCANNNNNTGG 1 cut(s) 1020
VpaK11BI GGWCC 3 cut(s) 249, 346, 649
XagI CCTNNNNNAGG 1 cut(s) 1004
XapI RAATTY 3 cut(s) 1744, 1796, 1885
XbaI TCTAGA 1 cut(s) 865
XceI RCATGY 1 cut(s) 1279
XcmI CCANNNNNNNNNTGG 2 cut(s) 443, 643
XmiI GTMKAC 1 cut(s) 1463
XmnI GAANNNNTTC 2 cut(s) 377, 1713
XspI CTAG 2 cut(s) 866, 1032
Zsp2I ATGCAT 1 cut(s) 713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.