Rh3DG132900

At1g04910-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0014239
Physical Location & Seq
Forward (+)
11308821 .. 11311928
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG132900.1

Sequence Viewer

Length: 1986 bp
ATGTCGTCGGGTGGCCTTAATAACACGGCCGGTAATGCCCCGACCACCGCCTCGGCCGCCATCGCGCTGCCCACTACGACCAGACGACGCGTCGCCGATGGCGTCATGGACGCCTCCGCCGCCACCTTGGCCTCACCGACCAACATCATCAACGTAGGCAAGATAAACCCGGACGCGGTTGTTTCCTCGGCGGACGAGGACGAGGAGAGCGGCCCGACCTGCTGCAACGGCTCTATGTCCGGCGCCGGGTCCCACCTCCACAGCAACCATTATTCTCCCGTGATCAAGTACCTGCTGCTTCGCAGGAGAGTGTTCTTTTGTGTTCCCGAGGCGTGGCTGTTGTCGGTCCGGTCGGGGAGGAACCTCGGCAGGAAGATCTTCGGGGCGCTAATGTTGATGGCGGTTGTTTCTGTGTTCTTCGCGTTTCTGGGCGGCCACGTGGAGGTTGGTGATAGGGTGAACAGGACGGAGGGGAGGCTTTTGATTCTGGCGACGTTACAAGATGATGGGACGGTGGCGCAACACGCCGTCACTGAGAACCAGGCGGCCAGGCCCAAACGGGTTTTTGAGAGAATGTCGTTATCGGAATCGGAATCGGAATCGGAATCGGAAGCGGAACCGGAATCCTCCATGCCCAAACGTCTTTTGGACCAACAGAATACGATTCCAGAAATATGGATGAAACCAAATAGTGACGATTTTAACAAATGCATAGCTCGACCCAGAAATCGGATAAGAACAGGATCGAAAACAAATGGCTATCTCCTTGTTCATGCCAATGGTGGATTGAATCAAATGAGAACAGGGATATGTGATATGGTAGCCGTTGCAAGGATAATGAATGCTACTCTGGTGCTTCCTTATCTAGATCACGAGTCTTTTTGGACTGATCCAAGTGGTTTTAAAGATATATTTGACTGGAGACACTTCATAGACGTGTTAACAGATGATATTGAGATAATCGAGTATTTGCCAACCCGTTATGCAGCTCAAAAGCCCCTTCTGAAGGCTCCCATCTCCTGGTCTAAGGCTAGTTATTACAGAAAAGAAATGATACCGTTGTTGAAAAAGCATAAGGTTGTAAAGTTTACCCACACTGATTCGCGTCTTGCTAATAATGGACTTGCAAGTTCCATCCAAAGGTTGAGGTGCCGTGCCAATTATGAGGGTCTTCGATATACAAAGGAGATTGAGGATCTTGGGAAAGTTTTGGTCAATAGATTAAGGAACAATGGCAATCCATATATTGCTCTTCATTTAAGATATGAGAAAGACATGCTTGCTTTCACTGGCTGCAGCCACAACCTTACTGCAAAGGAAGATGAGGAACTTCGGGATATGAGATACAGTGTTAAACATTGGAAGGAGAAAGAGATAGATAGTGAAGAGCGACGACTCCAAGGTGGATGCCCATTTTCCCCCAGAGAGGCAGCCCTGTTCCTCAAGGCCATGGGATACCCGTCGACAACAACAATCTACATTGTTGCTGGGGAGATATATGGCAGCAATAGCATGGCTGCATTTCGCTCTGAGTATCCTAATGTCTTCTCCCATAACACTCTTGCAACAGAAGAAGAGTTGAGGCCCTTCAAGCCATATCAAAATCGCCTTGCTGCCTTGGATTACATAGTAGCATTAGAGAGTGATGTCTTTGTATATACATACGATGGAAACATGGCTAAGGCAGTACAAGGACATAGAAGATATGAAGGATTTCGGAAGACTATTAACCCTGACAGACAAAATTTTGTGAAACTGGTTGACCTATTGGATAAGGGTGATTTATCATGGGAAGAATTTTCTTCAGCGGTTACAACTCTGCATTCTGATCGGCTGGGAGCACCATATGTTCGACAGATAGGAGAGTCACCCAGGTTGGAGGAGAATTTTTATGCAAATCCTTTCCCTGGTTGTATCTGTAACAACTCCCAGGAGCACATTGCTCGCCTGAAATCCGATGAGAGACGGAGCACAAGTGTTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

661

Amino Acids

74.25

Weight (kDa)

7.95

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 254 - 570 9e-107 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014239)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37980 AT5G01100
fragaria_vesca FvH4_6g12260
malus_domestica MD04G1144500.v1.1 MD12G1158500.v1.1
prunus_persica Prupe.6G268900_v2.0.a1
pyrus_communis pycom05g13890 pycom12g15050
rosa_chinensis RchiOBHm_Chr3g0464061
rosa_laevigata RLG00000024725
rosa_multiflora Rmu_sc0006492.1_g000019
rosa_roxburghii Rroxscaffold_6G00416010
rosa_rugosa Rorug03G0070500
rosa_samantha Rh3BG131600 Rh3CG133900 Rh3DG132900
rosa_wichuraiana Rw3G010760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 227, 300
AccB1I GGYRCC 2 cut(s) 242, 1149
AccB7I CCANNNNNTGG 1 cut(s) 1020
AccBSI CCGCTC 1 cut(s) 210
AccI GTMKAC 1 cut(s) 1463
AccII CGCG 5 cut(s) 65, 90, 176, 422, 1105
AclWI GGATC 3 cut(s) 751, 884, 1203
AcoI YGGCCR 4 cut(s) 27, 54, 433, 546
AcsI RAATTY 3 cut(s) 1744, 1796, 1885
AcuI CTGAAG 2 cut(s) 1025, 1788
AcvI CACGTG 1 cut(s) 439
AcyI GRCGYC 3 cut(s) 102, 111, 243
AfaI GTAC 2 cut(s) 290, 1689
AflIII ACRYGT 2 cut(s) 88, 936
AgsI TTSAA 3 cut(s) 790, 1066, 1591
AhdI GACNNNNNGTC 1 cut(s) 89
AjiI CACGTC 1 cut(s) 937
AjnI CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
AluBI AGCT 2 cut(s) 716, 989
AluI AGCT 2 cut(s) 716, 989
Alw21I GWGCWC 3 cut(s) 1843, 1938, 1973
Alw26I GTCTC 2 cut(s) 916, 1957
AlwI GGATC 3 cut(s) 751, 884, 1203
Ama87I CYCGRG 1 cut(s) 326
ApoI RAATTY 3 cut(s) 1744, 1796, 1885
Asp700I GAANNNNTTC 2 cut(s) 377, 1713
AspLEI GCGC 4 cut(s) 67, 245, 388, 520
AspS9I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
AsuC2I CCSGG 2 cut(s) 170, 247
AsuHPI GGTGA 5 cut(s) 126, 461, 469, 1790, 1860
AvaI CYCGRG 1 cut(s) 326
AvaII GGWCC 3 cut(s) 249, 346, 649
BaeI ACNNNNGTAYC 2 cut(s) 1046, 1079
BanI GGYRCC 2 cut(s) 242, 1149
BauI CACGAG 1 cut(s) 872
BbrPI CACGTG 1 cut(s) 439
BbsI GAAGAC 3 cut(s) 1163, 1537, 1727
Bbv12I GWGCWC 3 cut(s) 1843, 1938, 1973
BccI CCATC 7 cut(s) 68, 92, 391, 500, 1022, 1142, 1661
BceAI ACGGC 5 cut(s) 42, 244, 512, 809, 1137
BcgI CGANNNNNNTGC 4 cut(s) 1811, 1845, 1925, 1959
BciT130I CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
BciVI GTATCC 2 cut(s) 1448, 1545
BclI TGATCA 1 cut(s) 282
BcnI CCSGG 2 cut(s) 170, 247
BcoDI GTCTC 2 cut(s) 916, 1957
BfaI CTAG 2 cut(s) 866, 1032
BfmI CTRYAG 1 cut(s) 1294
BfoI RGCGCY 2 cut(s) 246, 389
BfuAI ACCTGC 2 cut(s) 227, 300
BfuI GTATCC 2 cut(s) 1448, 1545
BglI GCCNNNNNGGC 1 cut(s) 128
BglII AGATCT 1 cut(s) 375
Bme1390I CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
Bme18I GGWCC 3 cut(s) 249, 346, 649
BmeRI GACNNNNNGTC 1 cut(s) 89
BmeT110I CYCGRG 1 cut(s) 326
BmgBI CACGTC 1 cut(s) 937
BmgT120I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
BmiI GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
BmrFI CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
BmsI GCATC 1 cut(s) 1397
BpiI GAAGAC 3 cut(s) 1163, 1537, 1727
BpmI CTGGAG 1 cut(s) 940
Bpu10I CCTNAGC 1 cut(s) 1680
BpuEI CTTGAG 1 cut(s) 1427
BpuMI CCSGG 2 cut(s) 170, 247
BsaAI YACGTR 1 cut(s) 439
BsaHI GRCGYC 3 cut(s) 102, 111, 243
BsaWI WCCGGW 2 cut(s) 348, 619
BsaXI ACNNNNNCTCC 1 cut(s) 1960
Bse118I RCCGGY 1 cut(s) 29
Bse1I ACTGG 3 cut(s) 923, 1294, 1761
Bse3DI GCAATG 1 cut(s) 1938
BseBI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
BseGI GGATG 3 cut(s) 684, 1134, 1412
BseMI GCAATG 1 cut(s) 1938
BseMII CTCAG 2 cut(s) 525, 1521
BseNI ACTGG 3 cut(s) 923, 1294, 1761
BseRI GAGGAG 2 cut(s) 218, 1895
BseX3I CGGCCG 2 cut(s) 27, 54
BseYI CCCAGC 2 cut(s) 1487, 1834
Bsh1236I CGCG 5 cut(s) 65, 90, 176, 422, 1105
Bsh1285I CGRYCG 3 cut(s) 30, 57, 353
BshNI GGYRCC 2 cut(s) 242, 1149
BsiEI CGRYCG 3 cut(s) 30, 57, 353
BsiHKAI GWGCWC 3 cut(s) 1843, 1938, 1973
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
BslFI GGGAC 2 cut(s) 235, 523
BsmAI GTCTC 2 cut(s) 916, 1957
BsmBI CGTCTC 1 cut(s) 1957
BsmFI GGGAC 2 cut(s) 235, 523
BsmI GAATGC 2 cut(s) 847, 1822
BsoBI CYCGRG 1 cut(s) 326
Bsp1286I GDGCHC 3 cut(s) 1843, 1938, 1973
Bsp143I GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
Bsp19I CCATGG 1 cut(s) 1449
BspCNI CTCAG 2 cut(s) 526, 1522
BspFNI CGCG 5 cut(s) 65, 90, 176, 422, 1105
BspLI GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
BspMAI CTGCAG 1 cut(s) 1298
BspMI ACCTGC 2 cut(s) 227, 300
BspPI GGATC 3 cut(s) 751, 884, 1203
BspQI GCTCTTC 2 cut(s) 1257, 1380
BspT107I GGYRCC 2 cut(s) 242, 1149
BsrBI CCGCTC 1 cut(s) 210
BsrDI GCAATG 1 cut(s) 1938
BsrFI RCCGGY 1 cut(s) 29
BsrI ACTGG 3 cut(s) 923, 1294, 1761
BssAI RCCGGY 1 cut(s) 29
BssMI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
BssNI GRCGYC 3 cut(s) 102, 111, 243
BssSI CACGAG 1 cut(s) 872
BssT1I CCWWGG 4 cut(s) 126, 1399, 1449, 1617
Bst2BI CACGAG 1 cut(s) 872
Bst2UI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
Bst4CI ACNGT 3 cut(s) 514, 1059, 1349
Bst6I CTCTTC 3 cut(s) 1257, 1380, 1569
BstACI GRCGYC 3 cut(s) 102, 111, 243
BstBAI YACGTR 1 cut(s) 439
BstC8I GCNNGC 2 cut(s) 1281, 1945
BstDEI CTNAG 4 cut(s) 534, 1026, 1530, 1680
BstDSI CCRYGG 1 cut(s) 1449
BstENI CCTNNNNNAGG 1 cut(s) 1004
BstF5I GGATG 3 cut(s) 684, 1134, 1412
BstFNI CGCG 5 cut(s) 65, 90, 176, 422, 1105
BstH2I RGCGCY 2 cut(s) 246, 389
BstHHI GCGC 4 cut(s) 67, 245, 388, 520
BstKTI GATC 7 cut(s) 285, 378, 746, 871, 892, 1198, 1831
BstMAI GTCTC 2 cut(s) 916, 1957
BstMBI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
BstMCI CGRYCG 3 cut(s) 30, 57, 353
BstNI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
BstNSI RCATGY 1 cut(s) 1279
BstSCI CCNGG 8 cut(s) 168, 245, 540, 548, 1019, 1871, 1906, 1929
BstSFI CTRYAG 1 cut(s) 1294
BstUI CGCG 5 cut(s) 65, 90, 176, 422, 1105
BstV2I GAAGAC 3 cut(s) 1163, 1537, 1727
BstX2I RGATCY 2 cut(s) 375, 1195
BstXI CCANNNNNNTGG 1 cut(s) 675
BstYI RGATCY 2 cut(s) 375, 1195
BstZI CGGCCG 2 cut(s) 27, 54
BsuI GTATCC 2 cut(s) 1448, 1545
BtgI CCRYGG 1 cut(s) 1449
BtgZI GCGATG 1 cut(s) 46
BtrI CACGTC 1 cut(s) 937
BtsCI GGATG 3 cut(s) 684, 1134, 1412
BtsIMutI CAGTG 4 cut(s) 531, 1095, 1287, 1354
BveI ACCTGC 2 cut(s) 227, 300
Cac8I GCNNGC 2 cut(s) 1281, 1945
CfoI GCGC 4 cut(s) 67, 245, 388, 520
Cfr10I RCCGGY 1 cut(s) 29
Cfr13I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
CpoI CGGWCCG 1 cut(s) 346
CseI GACGC 6 cut(s) 79, 91, 96, 119, 182, 1094
Csp6I GTAC 2 cut(s) 289, 1688
CspI CGGWCCG 1 cut(s) 346
CviAII CATG 8 cut(s) 106, 631, 773, 1276, 1450, 1513, 1675, 1788
CviQI GTAC 2 cut(s) 289, 1688
DdeI CTNAG 4 cut(s) 534, 1026, 1530, 1680
DinI GGCGCC 1 cut(s) 244
DpnI GATC 7 cut(s) 284, 377, 745, 870, 891, 1197, 1830
DpnII GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
DraI TTTAAA 1 cut(s) 904
DriI GACNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 4 cut(s) 27, 54, 433, 546
EagI CGGCCG 2 cut(s) 27, 54
Eam1104I CTCTTC 3 cut(s) 1257, 1380, 1569
Eam1105I GACNNNNNGTC 1 cut(s) 89
EarI CTCTTC 3 cut(s) 1257, 1380, 1569
EciI GGCGGA 2 cut(s) 106, 206
EclXI CGGCCG 2 cut(s) 27, 54
Eco130I CCWWGG 4 cut(s) 126, 1399, 1449, 1617
Eco47I GGWCC 3 cut(s) 249, 346, 649
Eco52I CGGCCG 2 cut(s) 27, 54
Eco57I CTGAAG 2 cut(s) 1025, 1788
Eco72I CACGTG 1 cut(s) 439
Eco88I CYCGRG 1 cut(s) 326
EcoNI CCTNNNNNAGG 1 cut(s) 1004
EcoO109I RGGNCCY 2 cut(s) 249, 1584
EcoRII CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
EcoT14I CCWWGG 4 cut(s) 126, 1399, 1449, 1617
EcoT22I ATGCAT 1 cut(s) 713
EgeI GGCGCC 1 cut(s) 244
EheI GGCGCC 1 cut(s) 244
ErhI CCWWGG 4 cut(s) 126, 1399, 1449, 1617
Esp3I CGTCTC 1 cut(s) 1957
FaeI CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
FalI AAGNNNNNCTT 2 cut(s) 1263, 1295
FaqI GGGAC 2 cut(s) 235, 523
FatI CATG 8 cut(s) 105, 630, 772, 1275, 1449, 1512, 1674, 1787
FauNDI CATATG 1 cut(s) 1846
FbaI TGATCA 1 cut(s) 282
FblI GTMKAC 1 cut(s) 1463
FokI GGATG 3 cut(s) 691, 1121, 1419
FspBI CTAG 2 cut(s) 866, 1032
GlaI GCGC 4 cut(s) 66, 244, 387, 519
GsaI CCCAGC 2 cut(s) 1491, 1838
GsuI CTGGAG 1 cut(s) 940
HaeII RGCGCY 2 cut(s) 246, 389
HapII CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
HgaI GACGC 6 cut(s) 79, 91, 96, 119, 182, 1094
HhaI GCGC 4 cut(s) 67, 245, 388, 520
Hin1I GRCGYC 3 cut(s) 102, 111, 243
Hin1II CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
Hin6I GCGC 4 cut(s) 65, 243, 386, 518
HinP1I GCGC 4 cut(s) 65, 243, 386, 518
HincII GTYRAC 3 cut(s) 942, 1464, 1762
HindII GTYRAC 3 cut(s) 942, 1464, 1762
HpaI GTTAAC 1 cut(s) 942
HpaII CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
HphI GGTGA 5 cut(s) 126, 461, 469, 1790, 1860
Hpy166II GTNNAC 5 cut(s) 460, 942, 1089, 1464, 1762
Hpy188III TCNNGA 5 cut(s) 326, 668, 866, 872, 1334
Hpy8I GTNNAC 5 cut(s) 460, 942, 1089, 1464, 1762
Hpy99I CGWCG 6 cut(s) 10, 90, 95, 496, 1395, 1465
HpyAV CCTTC 5 cut(s) 1000, 1010, 1357, 1597, 1703
HpyCH4III ACNGT 3 cut(s) 514, 1059, 1349
HpyCH4IV ACGT 5 cut(s) 153, 438, 494, 640, 936
HpyF3I CTNAG 4 cut(s) 534, 1026, 1530, 1680
HpySE526I ACGT 5 cut(s) 153, 438, 494, 640, 936
Hsp92I GRCGYC 3 cut(s) 102, 111, 243
Hsp92II CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
HspAI GCGC 4 cut(s) 65, 243, 386, 518
KasI GGCGCC 1 cut(s) 242
KflI GGGWCCC 1 cut(s) 249
Ksp22I TGATCA 1 cut(s) 282
KspAI GTTAAC 1 cut(s) 942
Kzo9I GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
LguI GCTCTTC 2 cut(s) 1257, 1380
LmnI GCTCC 4 cut(s) 1015, 1838, 1933, 1968
LweI GCATC 1 cut(s) 1397
MaeI CTAG 2 cut(s) 866, 1032
MaeII ACGT 5 cut(s) 153, 438, 494, 640, 936
MaeIII GTNAC 6 cut(s) 495, 529, 692, 1810, 1866, 1919
MalI GATC 7 cut(s) 284, 377, 745, 870, 891, 1197, 1830
MbiI CCGCTC 1 cut(s) 210
MboI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
MflI RGATCY 2 cut(s) 375, 1195
MhlI GDGCHC 3 cut(s) 1843, 1938, 1973
MluCI AATT 4 cut(s) 1159, 1744, 1796, 1885
MluI ACGCGT 1 cut(s) 88
Mly113I GGCGCC 1 cut(s) 243
MlyI GAGTC 3 cut(s) 884, 1389, 1874
MmeI TCCRAC 1 cut(s) 1857
Mph1103I ATGCAT 1 cut(s) 713
MroXI GAANNNNTTC 2 cut(s) 377, 1713
MseI TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
MslI CAYNNNNRTG 2 cut(s) 777, 935
MspA1I CMGCKG 1 cut(s) 1808
MspI CCGG 6 cut(s) 30, 170, 240, 246, 349, 620
MspR9I CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
Mva1269I GAATGC 2 cut(s) 847, 1822
MvaI CCWGG 6 cut(s) 542, 550, 1021, 1873, 1908, 1931
MvnI CGCG 5 cut(s) 65, 90, 176, 422, 1105
NarI GGCGCC 1 cut(s) 243
NciI CCSGG 2 cut(s) 170, 247
NcoI CCATGG 1 cut(s) 1449
NdeI CATATG 1 cut(s) 1846
NdeII GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
NlaIII CATG 8 cut(s) 109, 634, 776, 1279, 1453, 1516, 1678, 1791
NlaIV GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
NmeAIII GCCGAG 3 cut(s) 32, 167, 345
NmuCI GTSAC 3 cut(s) 529, 692, 1866
NsiI ATGCAT 1 cut(s) 713
NspI RCATGY 1 cut(s) 1279
PciSI GCTCTTC 2 cut(s) 1257, 1380
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PctI GAATGC 2 cut(s) 847, 1822
PdmI GAANNNNTTC 2 cut(s) 377, 1713
PfeI GAWTC 9 cut(s) 484, 587, 593, 599, 605, 623, 664, 790, 1100
PflMI CCANNNNNTGG 1 cut(s) 1020
PleI GAGTC 3 cut(s) 883, 1389, 1873
PluTI GGCGCC 1 cut(s) 246
PmaCI CACGTG 1 cut(s) 439
PmlI CACGTG 1 cut(s) 439
PpsI GAGTC 3 cut(s) 883, 1389, 1873
Ppu21I YACGTR 1 cut(s) 439
PpuMI RGGWCCY 1 cut(s) 249
Psp5II RGGWCCY 1 cut(s) 249
Psp6I CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
PspCI CACGTG 1 cut(s) 439
PspFI CCCAGC 2 cut(s) 1487, 1834
PspGI CCWGG 6 cut(s) 540, 548, 1019, 1871, 1906, 1929
PspN4I GGNNCC 7 cut(s) 244, 250, 251, 362, 618, 1011, 1151
PspPI GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
PspPPI RGGWCCY 1 cut(s) 249
PstI CTGCAG 1 cut(s) 1298
PsuI RGATCY 2 cut(s) 375, 1195
RsaI GTAC 2 cut(s) 290, 1689
RsaNI GTAC 2 cut(s) 289, 1688
RseI CAYNNNNRTG 2 cut(s) 777, 935
Rsr2I CGGWCCG 1 cut(s) 346
RsrII CGGWCCG 1 cut(s) 346
SalI GTCGAC 1 cut(s) 1462
SapI GCTCTTC 2 cut(s) 1257, 1380
SaqAI TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
Sau3AI GATC 7 cut(s) 282, 375, 743, 868, 889, 1195, 1828
Sau96I GGNCC 6 cut(s) 212, 249, 346, 552, 649, 1584
SchI GAGTC 3 cut(s) 884, 1389, 1874
ScrFI CCNGG 8 cut(s) 170, 247, 542, 550, 1021, 1873, 1908, 1931
SduI GDGCHC 3 cut(s) 1843, 1938, 1973
SfaNI GCATC 1 cut(s) 1397
SfcI CTRYAG 1 cut(s) 1294
SfoI GGCGCC 1 cut(s) 244
SinI GGWCC 3 cut(s) 249, 346, 649
SmiMI CAYNNNNRTG 2 cut(s) 777, 935
SmlI CTYRAG 1 cut(s) 1442
SmoI CTYRAG 1 cut(s) 1442
Sse9I AATT 4 cut(s) 1159, 1744, 1796, 1885
SspDI GGCGCC 1 cut(s) 242
SspMI CTAG 2 cut(s) 866, 1032
StyD4I CCNGG 8 cut(s) 168, 245, 540, 548, 1019, 1871, 1906, 1929
StyI CCWWGG 4 cut(s) 126, 1399, 1449, 1617
TaaI ACNGT 3 cut(s) 514, 1059, 1349
TaiI ACGT 5 cut(s) 156, 441, 497, 643, 939
TaqI TCGA 6 cut(s) 718, 746, 963, 1174, 1463, 1852
TaqII GACCGA 1 cut(s) 334
TasI AATT 4 cut(s) 1159, 1744, 1796, 1885
TatI WGTACW 1 cut(s) 1687
TauI GCSGC 5 cut(s) 59, 122, 213, 435, 548
TfiI GAWTC 9 cut(s) 484, 587, 593, 599, 605, 623, 664, 790, 1100
Tru1I TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
Tru9I TTAA 8 cut(s) 18, 702, 903, 941, 1223, 1259, 1353, 1728
TscAI CASTG 4 cut(s) 538, 1102, 1294, 1354
TseFI GTSAC 3 cut(s) 529, 692, 1866
Tsp45I GTSAC 3 cut(s) 529, 692, 1866
TspDTI ATGAA 7 cut(s) 695, 761, 854, 919, 1244, 1722, 1971
TspGWI ACGGA 2 cut(s) 482, 1981
TspRI CASTG 4 cut(s) 538, 1102, 1294, 1354
Van91I CCANNNNNTGG 1 cut(s) 1020
VpaK11BI GGWCC 3 cut(s) 249, 346, 649
XagI CCTNNNNNAGG 1 cut(s) 1004
XapI RAATTY 3 cut(s) 1744, 1796, 1885
XbaI TCTAGA 1 cut(s) 865
XceI RCATGY 1 cut(s) 1279
XcmI CCANNNNNNNNNTGG 2 cut(s) 443, 643
XmiI GTMKAC 1 cut(s) 1463
XmnI GAANNNNTTC 2 cut(s) 377, 1713
XspI CTAG 2 cut(s) 866, 1032
Zsp2I ATGCAT 1 cut(s) 713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.