MD04G1144500.v1.1

At1g04910-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0014239
Physical Location & Seq
Reverse (-)
23327579 .. 23331287
3709 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1144500.v1.1.491

Sequence Viewer

Length: 1995 bp
ATGTCGTCCGGTGGGACGAACTGCTCAAGCAACATTAGTTCGAAACTACCGGCTCTCGTGGCGCTGCCCACGACCACCAGACGACGCGTCGCTGACGGCGTCATGGACGCCGGCGAGCGGCTCCCGACGAGCACTCTCTCTCCCGACAGCAACATTGTCTTCGCCGACGACGACGATGTGGAAAACGACAGCCTCCTCGACGGCACTATATGCGGGCCCCACCACAACCACAACCATTATTCGCACCACCCCGTGATGAAGTACCTCGTGCTCCGTCGGCGGCTATTCTTCTGCGTTCCCGATAAGTGGCTGCTCCCGATCGAGGACGGATTTCTTTGGACGGTCGCGATGTTGCAGTCGCTGAGATCGGGGCGGAACGTGGTCCGCAAGATTTTCGGGGCTCTGCTTTTGATGGCGGTTATCTCCGCGTTCGTGAAGTTCTCGTTTTTTAGCAGCCACGTCGAGGTGGACGGGGAGGTGGCACAGATGACGGAGGGCCGACTTTTGATTCTGAATACTGTGAAGGACGATTGGTCGGGGGCGCAGCGGGCCGTCGCCGAGAACCAGGAATCCAATTCTATGCCGAAACGCGTTTTGGAGAGGGAGAGGTTGTCGGAAACCGAATCCTCCACCATGTTCAAGCGACTTCTCGAGCGGTTGCCTACCCCAGAGATTTGGAGGAAACCCAACAGCGACAATCTTGATAAATGCATAGCTCGACCCAAGAACCGAATAAGGACGGGATCGAAAACAAATGGTTATCTGCTTGTTCATGCCAATGGCGGATTGAATCAGATGAGAACAGGGATATGTGATATGGTAGCCGTTGCAAAGATAATGAATGCTACCCTGGTTCTTCCACTGATGGACCATCAATCTTTTTGGACGGATCCAAGTGATTTTAAAGACATTTTTGACTGGAGACACTTCATGAAAGTATTGAAAGATGATATTGATATTATCGAGTATTTGCCAACCAAATATGCAGCTGTGAAGCCTGTTCTGAAGGCTCCCGTCTCCTGGTCGAAGGCGAGCTATTACAGAAGCGAGATGATCCCCTTGCTGAAAAAGCACAAGGTTATAAAGTTTACGCACACTGATTCTCGGCTTGCTAACAATGGACTAGCGTCCTCCATCCAAAAGCTGAGGTGCCGTGCGAATTATGAGGCTCTCCAGTACGCGAAGGAGATTGAGGATCTTGGGAGAGTTTTGGTTGACAGACTGAGGAACAATAGCAATCCGTATATTGCTCTTCATTTGAGATATGAAAAAGACATGCTCGCTTTCACTGGCTGCAGCCACAACCTTACTGCTGAGGAATCTGAGGAGCTTCGGGTTATGAGGTACAGCGTCAAACATTGGAAGGAGAAGGAGATCGATAGTGTAGAACGAAGGCTCCAAGGCGGATGCCCATTTTCCCCACGAGAGGCAGCCTTGTTCCTAAAAGCCATGGGATACCCTTCCACAACAACAATCTACATTGTTGCTGGCGAGATATATGGTAGCAACAGCATGGCTGCTTTTCGCGCTGAGTATCCGAATGTCTTCTCTCATAACACTCTTGCAACAGAAGAAGAGCTAGAGCCCTTCAAGCCTTACCAAAATCGGCTTGCAGCCTTGGATTATATTGTAGCAATGGAGAGTGATGCCTTTGTTTATACGTATGATGGAAATATGGCCAAGGCGGTGCAGGGACATAGGAGATTTGAAGGGTTCCAGAAGACTATCAACCCTGACAGACAAAATTTTGTTCAACTCGTCGATCTGTTGGATAAGGGAGCAATATCATGGGAACTTCTTTCGTCCGCGGTTAAAAATCTGCATTCTGACAGGCTTGGAGCACCATATGCTAGACAGATCGGTGAGTCGCCAAGGTTGGAGGAGAACTTTTATGCAAATCCCTTTCCCGGTTGCATCTGTAACAAGACGCAGGAGCAAATGTCTAGGGTGAAGTTTGATGAGAGACGAAGTATGACTGTTTCGTCGCAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

665

Amino Acids

75.52

Weight (kDa)

8.59

Isoelectric Point (pI)

47.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 254 - 569 1.4e-105 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014239)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37980 AT5G01100
fragaria_vesca FvH4_6g12260
malus_domestica MD04G1144500.v1.1 MD12G1158500.v1.1
prunus_persica Prupe.6G268900_v2.0.a1
pyrus_communis pycom05g13890 pycom12g15050
rosa_chinensis RchiOBHm_Chr3g0464061
rosa_laevigata RLG00000024725
rosa_multiflora Rmu_sc0006492.1_g000019
rosa_roxburghii Rroxscaffold_6G00416010
rosa_rugosa Rorug03G0070500
rosa_samantha Rh3BG131600 Rh3CG133900 Rh3DG132900
rosa_wichuraiana Rw3G010760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1082
AasI GACNNNNNNGTC 1 cut(s) 1981
AccB1I GGYRCC 1 cut(s) 1149
AccBSI CCGCTC 2 cut(s) 118, 655
AccII CGCG 7 cut(s) 87, 347, 428, 591, 1181, 1527, 1808
AclWI GGATC 5 cut(s) 751, 884, 897, 1048, 1203
AcoI YGGCCR 1 cut(s) 1677
AcsI RAATTY 1 cut(s) 1744
AcuI CTGAAG 1 cut(s) 1025
AcyI GRCGYC 2 cut(s) 99, 108
AdeI CACNNNGTG 1 cut(s) 253
AfaI GTAC 3 cut(s) 263, 1178, 1346
AfiI CCNNNNNNNGG 7 cut(s) 117, 306, 322, 463, 1020, 1426, 1907
AflIII ACRYGT 2 cut(s) 85, 589
AgsI TTSAA 6 cut(s) 640, 790, 943, 1591, 1709, 1754
AhdI GACNNNNNGTC 2 cut(s) 86, 532
AjiI CACGTC 1 cut(s) 460
AjnI CCWGG 3 cut(s) 564, 849, 1019
AjuI GAANNNNNNNTTGG 2 cut(s) 578, 610
AloI GAACNNNNNNTCC 4 cut(s) 554, 586, 1380, 1412
AluBI AGCT 6 cut(s) 716, 989, 1035, 1144, 1330, 1579
AluI AGCT 6 cut(s) 716, 989, 1035, 1144, 1330, 1579
Alw21I GWGCWC 3 cut(s) 134, 273, 1843
Alw26I GTCTC 3 cut(s) 916, 1021, 1957
AlwI GGATC 5 cut(s) 751, 884, 897, 1048, 1203
AlwNI CAGNNNCTG 1 cut(s) 361
Ama87I CYCGRG 1 cut(s) 650
AoxI GGCC 4 cut(s) 215, 496, 549, 1677
ApaI GGGCCC 1 cut(s) 219
ApoI RAATTY 1 cut(s) 1744
Asp700I GAANNNNTTC 1 cut(s) 1544
AspLEI GCGC 3 cut(s) 64, 544, 1529
AspS9I GGNCC 6 cut(s) 215, 216, 382, 496, 549, 868
AsuC2I CCSGG 1 cut(s) 1908
AsuHPI GGTGA 2 cut(s) 1874, 1960
AsuII TTCGAA 1 cut(s) 41
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 2 cut(s) 382, 868
BaeGI GKGCMC 1 cut(s) 219
BalI TGGCCA 1 cut(s) 1679
BamHI GGATCC 1 cut(s) 889
BanI GGYRCC 1 cut(s) 1149
BanII GRGCYC 3 cut(s) 219, 403, 1587
BauI CACGAG 3 cut(s) 56, 266, 1422
BbsI GAAGAC 3 cut(s) 151, 1537, 1727
Bbv12I GWGCWC 3 cut(s) 134, 273, 1843
BbvCI CCTCAGC 2 cut(s) 1145, 1314
BccI CCATC 5 cut(s) 406, 859, 879, 1142, 1661
BceAI ACGGC 5 cut(s) 112, 217, 536, 809, 1137
BcgI CGANNNNNNTGC 4 cut(s) 376, 410, 442, 476
BciT130I CCWGG 3 cut(s) 566, 851, 1021
BciVI GTATCC 2 cut(s) 1448, 1545
BcnI CCSGG 1 cut(s) 1908
BcoDI GTCTC 3 cut(s) 916, 1021, 1957
BfaI CTAG 4 cut(s) 1124, 1580, 1851, 1944
BfmI CTRYAG 1 cut(s) 1294
BfoI RGCGCY 1 cut(s) 65
BfuI GTATCC 2 cut(s) 1448, 1545
Bme1390I CCNGG 4 cut(s) 566, 851, 1021, 1908
Bme18I GGWCC 2 cut(s) 382, 868
BmeRI GACNNNNNGTC 2 cut(s) 86, 532
BmeT110I CYCGRG 1 cut(s) 650
BmgBI CACGTC 1 cut(s) 460
BmgT120I GGNCC 6 cut(s) 215, 216, 382, 496, 549, 868
BmiI GGNNCC 8 cut(s) 122, 217, 218, 891, 1011, 1151, 1397, 1715
BmrFI CCNGG 4 cut(s) 566, 851, 1021, 1908
BmsI GCATC 3 cut(s) 1397, 1636, 1923
BoxI GACNNNNGTC 1 cut(s) 1126
BpiI GAAGAC 3 cut(s) 151, 1537, 1727
BpmI CTGGAG 2 cut(s) 940, 1157
Bpu10I CCTNAGC 2 cut(s) 1145, 1314
Bpu14I TTCGAA 1 cut(s) 41
BpuEI CTTGAG 1 cut(s) 10
BpuMI CCSGG 1 cut(s) 1908
Bsa29I ATCGAT 1 cut(s) 1377
BsaAI YACGTR 1 cut(s) 1662
BsaHI GRCGYC 2 cut(s) 99, 108
BsaJI CCNNGG 7 cut(s) 849, 1399, 1449, 1617, 1680, 1806, 1871
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 8 cut(s) 124, 154, 596, 626, 1380, 1410, 1925, 1955
Bsc4I CCNNNNNNNGG 7 cut(s) 117, 306, 322, 463, 1020, 1426, 1907
Bse118I RCCGGY 2 cut(s) 49, 110
Bse1I ACTGG 3 cut(s) 923, 1174, 1294
Bse3DI GCAATG 1 cut(s) 1641
BseBI CCWGG 3 cut(s) 566, 851, 1021
BseCI ATCGAT 1 cut(s) 1377
BseDI CCNNGG 7 cut(s) 849, 1399, 1449, 1617, 1680, 1806, 1871
BseGI GGATG 2 cut(s) 1134, 1412
BseLI CCNNNNNNNGG 7 cut(s) 117, 306, 322, 463, 1020, 1426, 1907
BseMI GCAATG 1 cut(s) 1641
BseMII CTCAG 6 cut(s) 353, 1136, 1214, 1305, 1314, 1521
BseNI ACTGG 3 cut(s) 923, 1174, 1294
BseRI GAGGAG 3 cut(s) 185, 1340, 1895
BseSI GKGCMC 1 cut(s) 219
BsgI GTGCAG 1 cut(s) 1709
Bsh1236I CGCG 7 cut(s) 87, 347, 428, 591, 1181, 1527, 1808
Bsh1285I CGRYCG 2 cut(s) 321, 345
BshFI GGCC 4 cut(s) 217, 498, 551, 1679
BshNI GGYRCC 1 cut(s) 1149
BshVI ATCGAT 1 cut(s) 1377
BsiEI CGRYCG 2 cut(s) 321, 345
BsiHKAI GWGCWC 3 cut(s) 134, 273, 1843
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 4 cut(s) 9, 50, 111, 1908
BslFI GGGAC 2 cut(s) 28, 1707
BslI CCNNNNNNNGG 7 cut(s) 117, 306, 322, 463, 1020, 1426, 1907
BsmAI GTCTC 3 cut(s) 916, 1021, 1957
BsmBI CGTCTC 2 cut(s) 1021, 1957
BsmFI GGGAC 2 cut(s) 28, 1707
BsmI GAATGC 2 cut(s) 847, 1822
BsnI GGCC 4 cut(s) 217, 498, 551, 1679
BsoBI CYCGRG 1 cut(s) 650
Bsp119I TTCGAA 1 cut(s) 41
Bsp120I GGGCCC 1 cut(s) 215
Bsp1286I GDGCHC 6 cut(s) 134, 219, 273, 403, 1587, 1843
Bsp143I GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
Bsp19I CCATGG 1 cut(s) 1449
Bsp68I TCGCGA 1 cut(s) 347
BspANI GGCC 4 cut(s) 217, 498, 551, 1679
BspCNI CTCAG 6 cut(s) 354, 1137, 1215, 1306, 1315, 1522
BspDI ATCGAT 1 cut(s) 1377
BspFNI CGCG 7 cut(s) 87, 347, 428, 591, 1181, 1527, 1808
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 8 cut(s) 122, 217, 218, 891, 1011, 1151, 1397, 1715
BspMAI CTGCAG 1 cut(s) 1298
BspPI GGATC 5 cut(s) 751, 884, 897, 1048, 1203
BspQI GCTCTTC 2 cut(s) 1257, 1569
BspT104I TTCGAA 1 cut(s) 41
BspT107I GGYRCC 1 cut(s) 1149
BsrBI CCGCTC 2 cut(s) 118, 655
BsrDI GCAATG 1 cut(s) 1641
BsrFI RCCGGY 2 cut(s) 49, 110
BsrI ACTGG 3 cut(s) 923, 1174, 1294
BssAI RCCGGY 2 cut(s) 49, 110
BssECI CCNNGG 7 cut(s) 849, 1399, 1449, 1617, 1680, 1806, 1871
BssMI GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
BssNI GRCGYC 2 cut(s) 99, 108
BssSI CACGAG 3 cut(s) 56, 266, 1422
BssT1I CCWWGG 5 cut(s) 1399, 1449, 1617, 1680, 1871
Bst2BI CACGAG 3 cut(s) 56, 266, 1422
Bst2UI CCWGG 3 cut(s) 566, 851, 1021
Bst4CI ACNGT 3 cut(s) 343, 520, 1978
Bst6I CTCTTC 2 cut(s) 1257, 1569
BstACI GRCGYC 2 cut(s) 99, 108
BstAPI GCANNNNNTGC 2 cut(s) 210, 1847
BstBAI YACGTR 1 cut(s) 1662
BstBI TTCGAA 1 cut(s) 41
BstC8I GCNNGC 9 cut(s) 112, 116, 215, 549, 1033, 1110, 1281, 1489, 1611
BstDEI CTNAG 6 cut(s) 362, 1145, 1223, 1314, 1323, 1530
BstDSI CCRYGG 2 cut(s) 1449, 1806
BstF5I GGATG 2 cut(s) 1134, 1412
BstFNI CGCG 7 cut(s) 87, 347, 428, 591, 1181, 1527, 1808
BstH2I RGCGCY 1 cut(s) 65
BstHHI GCGC 3 cut(s) 64, 544, 1529
BstKTI GATC 9 cut(s) 321, 368, 746, 892, 1056, 1198, 1377, 1765, 1860
BstMAI GTCTC 3 cut(s) 916, 1021, 1957
BstMBI GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
BstMCI CGRYCG 2 cut(s) 321, 345
BstMWI GCNNNNNNNGC 8 cut(s) 59, 210, 277, 548, 1069, 1526, 1591, 1847
BstNI CCWGG 3 cut(s) 566, 851, 1021
BstNSI RCATGY 1 cut(s) 1279
BstPAI GACNNNNGTC 1 cut(s) 1126
BstSCI CCNGG 4 cut(s) 564, 849, 1019, 1906
BstSFI CTRYAG 1 cut(s) 1294
BstSLI GKGCMC 1 cut(s) 219
BstSNI TACGTA 1 cut(s) 1662
BstUI CGCG 7 cut(s) 87, 347, 428, 591, 1181, 1527, 1808
BstV2I GAAGAC 3 cut(s) 151, 1537, 1727
BstX2I RGATCY 2 cut(s) 889, 1195
BstXI CCANNNNNNTGG 1 cut(s) 675
BstYI RGATCY 2 cut(s) 889, 1195
Bsu15I ATCGAT 1 cut(s) 1377
BsuI GTATCC 2 cut(s) 1448, 1545
BsuRI GGCC 4 cut(s) 217, 498, 551, 1679
BsuTUI ATCGAT 1 cut(s) 1377
BtgI CCRYGG 2 cut(s) 1449, 1806
BtgZI GCGATG 1 cut(s) 362
BtrI CACGTC 1 cut(s) 460
BtsCI GGATG 2 cut(s) 1134, 1412
BtsIMutI CAGTG 3 cut(s) 860, 1095, 1287
BtuMI TCGCGA 1 cut(s) 347
Cac8I GCNNGC 9 cut(s) 112, 116, 215, 549, 1033, 1110, 1281, 1489, 1611
CaiI CAGNNNCTG 1 cut(s) 361
CciI TCATGA 1 cut(s) 930
CfoI GCGC 3 cut(s) 64, 544, 1529
Cfr10I RCCGGY 2 cut(s) 49, 110
Cfr13I GGNCC 6 cut(s) 215, 216, 382, 496, 549, 868
Cfr42I CCGCGG 1 cut(s) 1809
ClaI ATCGAT 1 cut(s) 1377
CseI GACGC 7 cut(s) 76, 88, 93, 116, 1116, 1339, 1936
Csp6I GTAC 3 cut(s) 262, 1177, 1345
CviAII CATG 8 cut(s) 103, 634, 773, 931, 1276, 1450, 1513, 1788
CviQI GTAC 3 cut(s) 262, 1177, 1345
DdeI CTNAG 6 cut(s) 362, 1145, 1223, 1314, 1323, 1530
DpnI GATC 9 cut(s) 320, 367, 745, 891, 1055, 1197, 1376, 1764, 1859
DpnII GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
DraI TTTAAA 1 cut(s) 904
DraIII CACNNNGTG 1 cut(s) 253
DrdI GACNNNNNNGTC 1 cut(s) 1981
DriI GACNNNNNGTC 2 cut(s) 86, 532
DseDI GACNNNNNNGTC 1 cut(s) 1981
EaeI YGGCCR 1 cut(s) 1677
Eam1104I CTCTTC 2 cut(s) 1257, 1569
Eam1105I GACNNNNNGTC 2 cut(s) 86, 532
EarI CTCTTC 2 cut(s) 1257, 1569
EciI GGCGGA 3 cut(s) 388, 798, 1419
Eco105I TACGTA 1 cut(s) 1662
Eco130I CCWWGG 5 cut(s) 1399, 1449, 1617, 1680, 1871
Eco24I GRGCYC 3 cut(s) 219, 403, 1587
Eco47I GGWCC 2 cut(s) 382, 868
Eco57I CTGAAG 1 cut(s) 1025
Eco88I CYCGRG 1 cut(s) 650
EcoO109I RGGNCCY 1 cut(s) 216
EcoRII CCWGG 3 cut(s) 564, 849, 1019
EcoT14I CCWWGG 5 cut(s) 1399, 1449, 1617, 1680, 1871
EcoT22I ATGCAT 1 cut(s) 713
EcoT38I GRGCYC 3 cut(s) 219, 403, 1587
ErhI CCWWGG 5 cut(s) 1399, 1449, 1617, 1680, 1871
Esp3I CGTCTC 2 cut(s) 1021, 1957
FaeI CATG 8 cut(s) 106, 637, 776, 934, 1279, 1453, 1516, 1791
FaqI GGGAC 2 cut(s) 28, 1707
FatI CATG 8 cut(s) 102, 633, 772, 930, 1275, 1449, 1512, 1787
FauI CCCGC 2 cut(s) 206, 540
FauNDI CATATG 1 cut(s) 1846
FokI GGATG 2 cut(s) 1121, 1419
FriOI GRGCYC 3 cut(s) 219, 403, 1587
FspBI CTAG 4 cut(s) 1124, 1580, 1851, 1944
GlaI GCGC 3 cut(s) 63, 543, 1528
GsuI CTGGAG 2 cut(s) 940, 1157
HaeII RGCGCY 1 cut(s) 65
HaeIII GGCC 4 cut(s) 217, 498, 551, 1679
HapII CCGG 4 cut(s) 9, 50, 111, 1908
HgaI GACGC 7 cut(s) 76, 88, 93, 116, 1116, 1339, 1936
HhaI GCGC 3 cut(s) 64, 544, 1529
Hin1I GRCGYC 2 cut(s) 99, 108
Hin1II CATG 8 cut(s) 106, 637, 776, 934, 1279, 1453, 1516, 1791
Hin6I GCGC 3 cut(s) 62, 542, 1527
HinP1I GCGC 3 cut(s) 62, 542, 1527
HincII GTYRAC 1 cut(s) 1216
HindII GTYRAC 1 cut(s) 1216
HinfI GANTC 7 cut(s) 508, 569, 623, 790, 1100, 1319, 1865
HpaII CCGG 4 cut(s) 9, 50, 111, 1908
HphI GGTGA 2 cut(s) 1874, 1960
Hpy166II GTNNAC 3 cut(s) 469, 1089, 1216
Hpy188I TCNGA 7 cut(s) 513, 616, 795, 1005, 1324, 1539, 1828
Hpy8I GTNNAC 3 cut(s) 469, 1089, 1216
HpyCH4III ACNGT 3 cut(s) 343, 520, 1978
HpyCH4IV ACGT 3 cut(s) 378, 459, 1661
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 210, 277, 548, 1069, 1526, 1591, 1847
HpyF3I CTNAG 6 cut(s) 362, 1145, 1223, 1314, 1323, 1530
HpySE526I ACGT 3 cut(s) 378, 459, 1661
Hsp92I GRCGYC 2 cut(s) 99, 108
Hsp92II CATG 8 cut(s) 106, 637, 776, 934, 1279, 1453, 1516, 1791
HspAI GCGC 3 cut(s) 62, 542, 1527
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
KspI CCGCGG 1 cut(s) 1809
Kzo9I GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
LguI GCTCTTC 2 cut(s) 1257, 1569
LmnI GCTCC 9 cut(s) 126, 276, 318, 1015, 1327, 1401, 1778, 1838, 1933
LweI GCATC 3 cut(s) 1397, 1636, 1923
MaeI CTAG 4 cut(s) 1124, 1580, 1851, 1944
MaeII ACGT 3 cut(s) 378, 459, 1661
MaeIII GTNAC 1 cut(s) 1919
MalI GATC 9 cut(s) 320, 367, 745, 891, 1055, 1197, 1376, 1764, 1859
MbiI CCGCTC 2 cut(s) 118, 655
MboI GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
MboII GAAGA 8 cut(s) 151, 280, 848, 1244, 1537, 1583, 1586, 1732
MflI RGATCY 2 cut(s) 889, 1195
MhlI GDGCHC 6 cut(s) 134, 219, 273, 403, 1587, 1843
MlsI TGGCCA 1 cut(s) 1679
MluCI AATT 3 cut(s) 574, 1159, 1744
MluI ACGCGT 2 cut(s) 85, 589
MluNI TGGCCA 1 cut(s) 1679
MlyI GAGTC 1 cut(s) 1874
MmeI TCCRAC 3 cut(s) 594, 1749, 1857
Mox20I TGGCCA 1 cut(s) 1679
Mph1103I ATGCAT 1 cut(s) 713
MreI CGCCGGCG 1 cut(s) 110
MroNI GCCGGC 1 cut(s) 110
MroXI GAANNNNTTC 1 cut(s) 1544
MscI TGGCCA 1 cut(s) 1679
MseI TTAA 2 cut(s) 903, 1812
MslI CAYNNNNRTG 1 cut(s) 777
Msp20I TGGCCA 1 cut(s) 1679
MspA1I CMGCKG 3 cut(s) 547, 989, 1808
MspI CCGG 4 cut(s) 9, 50, 111, 1908
MspR9I CCNGG 4 cut(s) 566, 851, 1021, 1908
Mva1269I GAATGC 2 cut(s) 847, 1822
MvaI CCWGG 3 cut(s) 566, 851, 1021
MvnI CGCG 7 cut(s) 87, 347, 428, 591, 1181, 1527, 1808
MwoI GCNNNNNNNGC 8 cut(s) 59, 210, 277, 548, 1069, 1526, 1591, 1847
NaeI GCCGGC 1 cut(s) 112
NciI CCSGG 1 cut(s) 1908
NcoI CCATGG 1 cut(s) 1449
NdeI CATATG 1 cut(s) 1846
NdeII GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
NgoMIV GCCGGC 1 cut(s) 110
NlaIII CATG 8 cut(s) 106, 637, 776, 934, 1279, 1453, 1516, 1791
NlaIV GGNNCC 8 cut(s) 122, 217, 218, 891, 1011, 1151, 1397, 1715
NmeAIII GCCGAG 2 cut(s) 583, 1084
NruI TCGCGA 1 cut(s) 347
NsiI ATGCAT 1 cut(s) 713
NspI RCATGY 1 cut(s) 1279
NspV TTCGAA 1 cut(s) 41
PaeR7I CTCGAG 1 cut(s) 650
PagI TCATGA 1 cut(s) 930
PciSI GCTCTTC 2 cut(s) 1257, 1569
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 168
PctI GAATGC 2 cut(s) 847, 1822
PdiI GCCGGC 1 cut(s) 112
PdmI GAANNNNTTC 1 cut(s) 1544
PfeI GAWTC 6 cut(s) 508, 569, 623, 790, 1100, 1319
PflFI GACNNNGTC 1 cut(s) 98
Ple19I CGATCG 1 cut(s) 321
PleI GAGTC 1 cut(s) 1873
PpsI GAGTC 1 cut(s) 1873
Ppu21I YACGTR 1 cut(s) 1662
PshAI GACNNNNGTC 1 cut(s) 1126
PsiI TTATAA 1 cut(s) 1082
Psp6I CCWGG 3 cut(s) 564, 849, 1019
PspGI CCWGG 3 cut(s) 564, 849, 1019
PspN4I GGNNCC 8 cut(s) 122, 217, 218, 891, 1011, 1151, 1397, 1715
PspOMI GGGCCC 1 cut(s) 215
PspPI GGNCC 6 cut(s) 215, 216, 382, 496, 549, 868
PstI CTGCAG 1 cut(s) 1298
PstNI CAGNNNCTG 1 cut(s) 361
PsuI RGATCY 2 cut(s) 889, 1195
PsyI GACNNNGTC 1 cut(s) 98
PvuI CGATCG 1 cut(s) 321
PvuII CAGCTG 1 cut(s) 989
RruI TCGCGA 1 cut(s) 347
RsaI GTAC 3 cut(s) 263, 1178, 1346
RsaNI GTAC 3 cut(s) 262, 1177, 1345
RseI CAYNNNNRTG 1 cut(s) 777
SacII CCGCGG 1 cut(s) 1809
SapI GCTCTTC 2 cut(s) 1257, 1569
SaqAI TTAA 2 cut(s) 903, 1812
Sau3AI GATC 9 cut(s) 318, 365, 743, 889, 1053, 1195, 1374, 1762, 1857
Sau96I GGNCC 6 cut(s) 215, 216, 382, 496, 549, 868
SchI GAGTC 1 cut(s) 1874
ScrFI CCNGG 4 cut(s) 566, 851, 1021, 1908
SduI GDGCHC 6 cut(s) 134, 219, 273, 403, 1587, 1843
SfaNI GCATC 3 cut(s) 1397, 1636, 1923
SfcI CTRYAG 1 cut(s) 1294
Sfr274I CTCGAG 1 cut(s) 650
Sfr303I CCGCGG 1 cut(s) 1809
SfuI TTCGAA 1 cut(s) 41
SgrAI CRCCGGYG 1 cut(s) 110
SgrBI CCGCGG 1 cut(s) 1809
SinI GGWCC 2 cut(s) 382, 868
SlaI CTCGAG 1 cut(s) 650
SmiMI CAYNNNNRTG 1 cut(s) 777
SmlI CTYRAG 2 cut(s) 25, 650
SmoI CTYRAG 2 cut(s) 25, 650
SnaBI TACGTA 1 cut(s) 1662
Sse9I AATT 3 cut(s) 574, 1159, 1744
SspMI CTAG 4 cut(s) 1124, 1580, 1851, 1944
StyD4I CCNGG 4 cut(s) 564, 849, 1019, 1906
StyI CCWWGG 5 cut(s) 1399, 1449, 1617, 1680, 1871
TaaI ACNGT 3 cut(s) 343, 520, 1978
TaiI ACGT 3 cut(s) 381, 462, 1664
TasI AATT 3 cut(s) 574, 1159, 1744
TauI GCSGC 2 cut(s) 121, 283
TfiI GAWTC 6 cut(s) 508, 569, 623, 790, 1100, 1319
Tru1I TTAA 2 cut(s) 903, 1812
Tru9I TTAA 2 cut(s) 903, 1812
TscAI CASTG 3 cut(s) 867, 1102, 1294
TspDTI ATGAA 7 cut(s) 272, 761, 854, 919, 947, 1244, 1281
TspGWI ACGGA 5 cut(s) 263, 342, 506, 902, 1230
TspRI CASTG 3 cut(s) 867, 1102, 1294
Tth111I GACNNNGTC 1 cut(s) 98
VpaK11BI GGWCC 2 cut(s) 382, 868
XapI RAATTY 1 cut(s) 1744
XceI RCATGY 1 cut(s) 1279
XhoI CTCGAG 1 cut(s) 650
XmnI GAANNNNTTC 1 cut(s) 1544
XspI CTAG 4 cut(s) 1124, 1580, 1851, 1944
Zsp2I ATGCAT 1 cut(s) 713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.