Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009822

Physical Location & Seq

Genomic Coordinates Reverse (-)

9061137 .. 9069888

Gene Structure 8752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g14710.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2856 bp

ATGTCGTGGTTAAGAAATGCGGTGAACTTGGCCGTAGAAGCAGGGGCCGGCAAGAGCCTCACTCGCACCGTTCGTAACTACGCCGACACCGTCGTCCTCCATGCAGGCAATGCCGTCGCCGGTGGAGCCAAACTTATCCTCCCTGACCGCATTGGTCCGCGGAATTTACAGAGCTTTAAGCATACTGTGAAAAGATTGGAGGAAGTGTCGGTTTCGTGTAGAGGGATAGAGAGAGTTCAGCTCTTGCGAAGGTGGTTGGTTGCTCTTAAAGAAATTGAGAGATTGACTGCCATTTACAATTATCAGGAAAGGAACTCTGAAGATCACATCATGTCCGATGAAAACTCTGATTCCCCGAAAAGACCTACCCTGGTTTATTATGTTGACGCTGATATGGGTGATGAACCGAAAACATTTCGCGATGTCTTTCTCCATAGCCAAGCTCTTGAAGGCATAACATTGTCCATGATTCTTGAAGAACCAACTGAGGAAGAAGTTTCACTACTTCTGGAGATATATGGGCTCTGTCTTACAGGAGGAAGGGAAGTACATGGTGTAGTGATGAGCAGTGTACAGAATTTGGCAAAAGCACTTTCATTCTACCAAGATGAAGTACTGATAAAGCGAGAAGAATTGCTCCAGTTGGCTCAAAATGCAATTTCAGGGCTTAAAATAAATGCTGATCTCACAAGAATAGATGCTGAAGCCTGCAGCATAAGGGAAGAACTTGATAAACTAATGGCACTACAGCAGCCTTTAAGTGAAAGTTATAACAATTCATCTGAGACAGAAAGAGATGCAACGGTAGAGAATTTAAAAGCAGCGCTCGTAGAAATTCAATTATGTTCCCGGTTAGAGTCACTGTTACTAAAGAAGAAATCCTTGAGCAATGGGGATTCACCTGAGCTGCACACTGAAAAGGTTGAGAAATTGAAAGTATTATCAGAATCTCTTGCTAATTCTACCTCACAGGCAGAAAAGCGCATTTTGGACCACAGATATCAGAAAGAAGAAGCACTTAACTTTCGTGTAGCTAAAGCTAATGAAGTAAGCCAACTTGAGAAGGATTTGGTGGCAGAGATTGCTCAAACGGAGAGGCAAAGAGAAGAACTCCAAGAAGCACTGAAGAAGGTCATTATCTCATTGAATGTTCTTCGTGGGCGCCTTCACAATGCGAGAGAAGAAAGAGAACAATTTGATGAAGCAAGTAATCAGATTATTGTACACTTAAAATCAAAGGAAGATGAACTTTCACGATCCATTGATTCATGTAGAGCAGAAGTTGATGTTGTCAATACCTGGATTTGTTTTTTGGAAGATACCTGGGTTCTCCAGGCATCATACACAGAGAAAAAGGAGAAGCAGGTCAATGAGGAACTGGAGAAATATGGAGGCTATTTTGTGAACTTGGTAATCCATCTTCTCTCTACTTATAAGGAAAGCTTGCGTTCATCCATCACTTGTATCAGGAATCTTGTGGAGAGAATGCGTTTAACTGAAGGTTCAAGTATACCACTCGGTAAAGATGATGGAAGTTCAAGCAGAAGTAACCCTAGGAAAAATATTGAAGAGGAATATCTGGATGTGGAAGCCAAGTTATTGACCACCTTGAGTGTAGTAGACACCATGAAGAGGCAATTCTATGTTCAAAATGAAGGCATCTACAGGAAAGATGGCCAGAAGGTCAAAGAGCTCTTCAATGACCTCAAGAACATAAAAGATGAGTTTGACTCCATTGAAAGACCTGTATTGGTAATTGAAGCTTCACCACGAAAACCAGACACACCACCTAGTGATGGGCCGTTTTTAAGTCCAACTCCTACCTCTACCTCACCATTGGGAATCAGGACTCCATTTTTCAAACGGGACGGTTCATCCAAATCTTCGTTGTTTAAGAAGGAGAAGAAACTAGATCAAAATGAAGAGTCAGTAAAATTAGATCCACCTCTGGCTACTAGGTCTCCTCACTCTTCCTCGGATAAGGAGGAGAAGAAATCAGAGCCAAAGGTAGAAGCCAAGTTATATCGAGGACTTGATATTGAGAGCAGAGAAGGCTCAGCAGAATTTGAGATTACTGATTGGGTGTTTGATGAACTTGAAAAGTCAGTAGACACCCCTTCTCCTGCTAAAGAAATCACCACTGCTTCTGCCAAAGAAAACACCACTGCTCCTTCCAAAGATATCACGACTGCTCTTGCTAAGGAAATCACCACAGCTCCCCCTTCCAAAGATATCACCACTACTCCTCCTTCCAAAGAAAACACCACTGTTGCTCTTCCCCAAGAAAATGCCACTGCTCCTTCCAAAGAAAACACCCTTGCTCCTGCTAAGGAAAACACCACTGCTACTCCTTCCAAAGAATGCACCACTGCTCCTGCTAAGGAAATCACCACTGCTCCGGCCGAAGAAAAGATCACTGCTCCTGTTAAGGAGATCACCACAGTCCCCGCTAAAGAAATCACCCCTGCTCCGGCCCAAGAAAACATCACTGCTGTTGTTAAGGAGATCACCACTGTTCCTCCTTCTAAAGATATCACCACTACTCCGGCCCAAGAAAACACCACTGCTCCCGCTAAGGAAGTCACCACTGCTCCTGCCAACGAAAACGCCACTGCTAATGCAAACGAGAACACCACCCCTCCTTCTCAAGTAAACGCTTCTGCTCATGCCAGTGAAAACACCACTGTTGATCCAAACAGGGAAAACACCACTACTGCTTCTGCCAAGGAAAACACCACTACTGCTCCTTCTCAAGTAAACGCTGCTGCTCATGCCAGCGCAACCACCACTGCCGTTCCTACCAAGGAAAACAACACTGCTGCTCCTCCCAAGGACGACACCACTGTTAACCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

952

Amino Acids

105.16

Weight (kDa)

5.18

Isoelectric Point (pI)

52.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37370 AT2G37370 AT2G37370 AT2G37370
fragaria_vesca	FvH4_6g14710
malus_domestica	MD04G1116900.v1.1 MD04G1117000.v1.1 MD12G1132600.v1.1
prunus_persica	Prupe.6G246700_v2.0.a1 Prupe.6G246700_v2.0.a1
pyrus_communis	pycom04g10680 pycom12g12840
rosa_chinensis	RchiOBHm_Chr3g0467931
rosa_laevigata	RLG00000024467
rosa_multiflora	Rmu_sc0001793.1_g000053
rosa_roxburghii	Rroxscaffold_6G00413300
rosa_rugosa	Rorug03G0090600
rosa_samantha	Rh3AG139000 Rh3BG160600 Rh3CG160500 Rh3DG161100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	771, 1434
AasI	GACNNNNNNGTC	1 cut(s)	92
Acc36I	ACCTGC	1 cut(s)	1354
AccB1I	GGYRCC	1 cut(s)	1161
AccI	GTMKAC	3 cut(s)	1510, 1620, 2109
AccII	CGCG	2 cut(s)	160, 420
AciI	CCGC	6 cut(s)	20, 148, 158, 160, 2448, 2571
AclWI	GGATC	3 cut(s)	1251, 1934, 2684
AcoI	YGGCCR	3 cut(s)	30, 1675, 2400
AcsI	RAATTY	5 cut(s)	163, 577, 811, 834, 2063
AcuI	CTGAAG	4 cut(s)	339, 723, 1145, 1518
AcyI	GRCGYC	1 cut(s)	1162
AdeI	CACNNNGTG	1 cut(s)	1793
AfaI	GTAC	4 cut(s)	549, 573, 615, 1224
AfeI	AGCGCT	1 cut(s)	825
AfiI	CCNNNNNNNGG	3 cut(s)	1632, 1796, 2470
AjnI	CCWGG	4 cut(s)	369, 1298, 1322, 1332
Alw21I	GWGCWC	1 cut(s)	1695
Alw26I	GTCTC	2 cut(s)	779, 1965
AlwI	GGATC	3 cut(s)	1251, 1934, 2684
Aor51HI	AGCGCT	1 cut(s)	825
AoxI	GGCC	7 cut(s)	30, 45, 1675, 1799, 2400, 2472, 2547
ApeKI	GCWGC	7 cut(s)	711, 751, 821, 907, 2762, 2765, 2819
ApoI	RAATTY	5 cut(s)	163, 577, 811, 834, 2063
AspA2I	CCTAGG	1 cut(s)	1553
AspLEI	GCGC	4 cut(s)	826, 984, 1164, 2780
AspS9I	GGNCC	6 cut(s)	45, 155, 991, 1799, 2473, 2548
AsuC2I	CCSGG	1 cut(s)	850
AvaII	GGWCC	2 cut(s)	155, 991
AvrII	CCTAGG	1 cut(s)	1553
BaeI	ACNNNNGTAYC	2 cut(s)	1311, 1344
BalI	TGGCCA	1 cut(s)	1677
BanI	GGYRCC	1 cut(s)	1161
BanII	GRGCYC	2 cut(s)	525, 1695
BarI	GAAGNNNNNNTAC	4 cut(s)	486, 518, 1404, 1436
Bbv12I	GWGCWC	1 cut(s)	1695
BbvI	GCAGC	7 cut(s)	723, 763, 833, 894, 2749, 2752, 2806
BccI	CCATC	5 cut(s)	1425, 1463, 1523, 1667, 1790
BceAI	ACGGC	4 cut(s)	17, 98, 1786, 2777
BcgI	CGANNNNNNTGC	2 cut(s)	97, 131
BciT130I	CCWGG	4 cut(s)	371, 1300, 1324, 1334
BcnI	CCSGG	1 cut(s)	850
BcoDI	GTCTC	2 cut(s)	779, 1965
BfaI	CTAG	4 cut(s)	1554, 1791, 1910, 1956
BfmI	CTRYAG	3 cut(s)	709, 746, 1663
BfoI	RGCGCY	2 cut(s)	827, 1165
BfuAI	ACCTGC	1 cut(s)	1354
BisI	GCNGC	7 cut(s)	712, 752, 822, 908, 2763, 2766, 2820
BlnI	CCTAGG	1 cut(s)	1553
BlpI	GCTNAGC	1 cut(s)	2056
BlsI	GCNGC	7 cut(s)	713, 753, 823, 909, 2764, 2767, 2821
BmcAI	AGTACT	1 cut(s)	615
Bme1390I	CCNGG	5 cut(s)	371, 850, 1300, 1324, 1334
Bme18I	GGWCC	2 cut(s)	155, 991
BmgT120I	GGNCC	6 cut(s)	45, 155, 991, 1799, 2473, 2548
BmiI	GGNNCC	3 cut(s)	46, 127, 1163
BmrFI	CCNGG	5 cut(s)	371, 850, 1300, 1324, 1334
BmsI	GCATC	4 cut(s)	688, 787, 1346, 1668
BplI	GAGNNNNNCTC	8 cut(s)	46, 78, 225, 257, 1095, 1127, 1715, 1747
BpmI	CTGGAG	4 cut(s)	530, 623, 1316, 1400
Bpu10I	CCTNAGC	5 cut(s)	903, 2199, 2328, 2379, 2574
Bpu1102I	GCTNAGC	1 cut(s)	2056
BpuEI	CTTGAG	6 cut(s)	904, 1079, 1630, 1691, 2631, 2736
BpuMI	CCSGG	1 cut(s)	850
BsaHI	GRCGYC	1 cut(s)	1162
BsaI	GGTCTC	1 cut(s)	1965
BsaJI	CCNNGG	8 cut(s)	158, 369, 1323, 1553, 1974, 2724, 2802, 2829
Bsc4I	CCNNNNNNNGG	3 cut(s)	1632, 1796, 2470
Bse118I	RCCGGY	2 cut(s)	47, 119
Bse1I	ACTGG	4 cut(s)	640, 1383, 2670, 2851
Bse3DI	GCAATG	2 cut(s)	115, 895
BseBI	CCWGG	4 cut(s)	371, 1300, 1324, 1334
BseDI	CCNNGG	8 cut(s)	158, 369, 1323, 1553, 1974, 2724, 2802, 2829
BseGI	GGATG	3 cut(s)	1451, 1588, 1874
BseLI	CCNNNNNNNGG	3 cut(s)	1632, 1796, 2470
BseMI	GCAATG	2 cut(s)	115, 895
BseMII	CTCAG	4 cut(s)	477, 774, 894, 2070
BseNI	ACTGG	4 cut(s)	640, 1383, 2670, 2851
BseRI	GAGGAG	4 cut(s)	1953, 2000, 2235, 2814
BseX3I	CGGCCG	1 cut(s)	2400
BseXI	GCAGC	7 cut(s)	723, 763, 833, 894, 2749, 2752, 2806
BsgI	GTGCAG	1 cut(s)	893
Bsh1236I	CGCG	2 cut(s)	160, 420
Bsh1285I	CGRYCG	1 cut(s)	2403
BshFI	GGCC	7 cut(s)	32, 47, 1677, 1801, 2402, 2474, 2549
BshNI	GGYRCC	1 cut(s)	1161
BsiEI	CGRYCG	1 cut(s)	2403
BsiHKAI	GWGCWC	1 cut(s)	1695
BsiSI	CCGG	6 cut(s)	48, 120, 850, 2399, 2471, 2546
BslFI	GGGAC	2 cut(s)	1880, 2429
BslI	CCNNNNNNNGG	3 cut(s)	1632, 1796, 2470
BsmAI	GTCTC	2 cut(s)	779, 1965
BsmFI	GGGAC	2 cut(s)	1880, 2429
BsmI	GAATGC	2 cut(s)	1491, 2366
BsnI	GGCC	7 cut(s)	32, 47, 1677, 1801, 2402, 2474, 2549
Bso31I	GGTCTC	1 cut(s)	1965
Bsp1286I	GDGCHC	2 cut(s)	525, 1695
Bsp1407I	TGTACA	2 cut(s)	571, 1222
Bsp143I	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
Bsp1720I	GCTNAGC	1 cut(s)	2056
Bsp68I	TCGCGA	1 cut(s)	420
BspACI	CCGC	6 cut(s)	20, 148, 158, 160, 2448, 2571
BspANI	GGCC	7 cut(s)	32, 47, 1677, 1801, 2402, 2474, 2549
BspCNI	CTCAG	4 cut(s)	478, 775, 895, 2069
BspFNI	CGCG	2 cut(s)	160, 420
BspLI	GGNNCC	3 cut(s)	46, 127, 1163
BspMAI	CTGCAG	1 cut(s)	713
BspMI	ACCTGC	1 cut(s)	1354
BspPI	GGATC	3 cut(s)	1251, 1934, 2684
BspQI	GCTCTTC	2 cut(s)	1700, 2280
BspT107I	GGYRCC	1 cut(s)	1161
BspTNI	GGTCTC	1 cut(s)	1965
BsrDI	GCAATG	2 cut(s)	115, 895
BsrFI	RCCGGY	2 cut(s)	47, 119
BsrGI	TGTACA	2 cut(s)	571, 1222
BsrI	ACTGG	4 cut(s)	640, 1383, 2670, 2851
BssAI	RCCGGY	2 cut(s)	47, 119
BssECI	CCNNGG	8 cut(s)	158, 369, 1323, 1553, 1974, 2724, 2802, 2829
BssMI	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
BssNAI	GTATAC	1 cut(s)	1511
BssNI	GRCGYC	1 cut(s)	1162
BssT1I	CCWWGG	4 cut(s)	1553, 2724, 2802, 2829
Bst1107I	GTATAC	1 cut(s)	1511
Bst2UI	CCWGG	4 cut(s)	371, 1300, 1324, 1334
Bst6I	CTCTTC	6 cut(s)	1563, 1625, 1700, 1917, 1975, 2280
BstACI	GRCGYC	1 cut(s)	1162
BstAPI	GCANNNNNTGC	2 cut(s)	110, 1082
BstAUI	TGTACA	2 cut(s)	571, 1222
BstC8I	GCNNGC	5 cut(s)	49, 106, 709, 1445, 2776
BstDEI	CTNAG	8 cut(s)	486, 783, 903, 2056, 2199, 2328, 2379, 2574
BstDSI	CCRYGG	1 cut(s)	158
BstF5I	GGATG	3 cut(s)	1451, 1588, 1874
BstFNI	CGCG	2 cut(s)	160, 420
BstH2I	RGCGCY	2 cut(s)	827, 1165
BstHHI	GCGC	4 cut(s)	826, 984, 1164, 2780
BstKTI	GATC	9 cut(s)	325, 685, 1259, 1915, 1942, 2415, 2436, 2508, 2692
BstMAI	GTCTC	2 cut(s)	779, 1965
BstMBI	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
BstMCI	CGRYCG	1 cut(s)	2403
BstMWI	GCNNNNNNNGC	8 cut(s)	38, 63, 110, 125, 653, 1082, 2052, 2771
BstNI	CCWGG	4 cut(s)	371, 1300, 1324, 1334
BstSCI	CCNGG	5 cut(s)	369, 848, 1298, 1322, 1332
BstSFI	CTRYAG	3 cut(s)	709, 746, 1663
BstUI	CGCG	2 cut(s)	160, 420
BstV1I	GCAGC	7 cut(s)	723, 763, 833, 894, 2749, 2752, 2806
BstX2I	RGATCY	1 cut(s)	1939
BstYI	RGATCY	1 cut(s)	1939
BstZ17I	GTATAC	1 cut(s)	1511
BstZI	CGGCCG	1 cut(s)	2400
BsuRI	GGCC	7 cut(s)	32, 47, 1677, 1801, 2402, 2474, 2549
BtgI	CCRYGG	1 cut(s)	158
BtgZI	GCGATG	1 cut(s)	435
BtsCI	GGATG	3 cut(s)	1451, 1588, 1874
BtuMI	TCGCGA	1 cut(s)	420
BveI	ACCTGC	1 cut(s)	1354
Cac8I	GCNNGC	5 cut(s)	49, 106, 709, 1445, 2776
CfoI	GCGC	4 cut(s)	826, 984, 1164, 2780
Cfr10I	RCCGGY	2 cut(s)	47, 119
Cfr13I	GGNCC	6 cut(s)	45, 155, 991, 1799, 2473, 2548
Cfr42I	CCGCGG	1 cut(s)	161
CseI	GACGC	1 cut(s)	395
Csp6I	GTAC	4 cut(s)	548, 572, 614, 1223
CviAII	CATG	8 cut(s)	101, 331, 466, 551, 1269, 1627, 2666, 2771
CviQI	GTAC	4 cut(s)	548, 572, 614, 1223
DdeI	CTNAG	8 cut(s)	486, 783, 903, 2056, 2199, 2328, 2379, 2574
DinI	GGCGCC	1 cut(s)	1163
DpnI	GATC	9 cut(s)	324, 684, 1258, 1914, 1941, 2414, 2435, 2507, 2691
DpnII	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
DraI	TTTAAA	1 cut(s)	816
DraIII	CACNNNGTG	1 cut(s)	1793
DrdI	GACNNNNNNGTC	1 cut(s)	92
DseDI	GACNNNNNNGTC	1 cut(s)	92
EaeI	YGGCCR	3 cut(s)	30, 1675, 2400
EagI	CGGCCG	1 cut(s)	2400
Eam1104I	CTCTTC	6 cut(s)	1563, 1625, 1700, 1917, 1975, 2280
EarI	CTCTTC	6 cut(s)	1563, 1625, 1700, 1917, 1975, 2280
Ecl136II	GAGCTC	1 cut(s)	1693
EclXI	CGGCCG	1 cut(s)	2400
Eco130I	CCWWGG	4 cut(s)	1553, 2724, 2802, 2829
Eco24I	GRGCYC	2 cut(s)	525, 1695
Eco31I	GGTCTC	1 cut(s)	1965
Eco32I	GATATC	4 cut(s)	1001, 2182, 2233, 2533
Eco47I	GGWCC	2 cut(s)	155, 991
Eco47III	AGCGCT	1 cut(s)	825
Eco52I	CGGCCG	1 cut(s)	2400
Eco53kI	GAGCTC	1 cut(s)	1693
Eco57I	CTGAAG	4 cut(s)	339, 723, 1145, 1518
EcoICRI	GAGCTC	1 cut(s)	1693
EcoRII	CCWGG	4 cut(s)	369, 1298, 1322, 1332
EcoRV	GATATC	4 cut(s)	1001, 2182, 2233, 2533
EcoT14I	CCWWGG	4 cut(s)	1553, 2724, 2802, 2829
EcoT38I	GRGCYC	2 cut(s)	525, 1695
EgeI	GGCGCC	1 cut(s)	1163
EheI	GGCGCC	1 cut(s)	1163
ErhI	CCWWGG	4 cut(s)	1553, 2724, 2802, 2829
FaeI	CATG	8 cut(s)	104, 334, 469, 554, 1272, 1630, 2669, 2774
FalI	AAGNNNNNCTT	8 cut(s)	866, 898, 1002, 1034, 1233, 1265, 1427, 1459
FaqI	GGGAC	2 cut(s)	1880, 2429
FatI	CATG	8 cut(s)	100, 330, 465, 550, 1268, 1626, 2665, 2770
FauI	CCCGC	2 cut(s)	2455, 2578
FblI	GTMKAC	3 cut(s)	1510, 1620, 2109
Fnu4HI	GCNGC	7 cut(s)	712, 752, 822, 908, 2763, 2766, 2820
FokI	GGATG	3 cut(s)	1438, 1595, 1861
FriOI	GRGCYC	2 cut(s)	525, 1695
Fsp4HI	GCNGC	7 cut(s)	712, 752, 822, 908, 2763, 2766, 2820
FspBI	CTAG	4 cut(s)	1554, 1791, 1910, 1956
GlaI	GCGC	4 cut(s)	825, 983, 1163, 2779
GluI	GCNGC	7 cut(s)	712, 752, 822, 908, 2763, 2766, 2820
GsuI	CTGGAG	4 cut(s)	530, 623, 1316, 1400
HaeII	RGCGCY	2 cut(s)	827, 1165
HaeIII	GGCC	7 cut(s)	32, 47, 1677, 1801, 2402, 2474, 2549
HapII	CCGG	6 cut(s)	48, 120, 850, 2399, 2471, 2546
HgaI	GACGC	1 cut(s)	395
HhaI	GCGC	4 cut(s)	826, 984, 1164, 2780
Hin1I	GRCGYC	1 cut(s)	1162
Hin1II	CATG	8 cut(s)	104, 334, 469, 554, 1272, 1630, 2669, 2774
Hin6I	GCGC	4 cut(s)	824, 982, 1162, 2778
HinP1I	GCGC	4 cut(s)	824, 982, 1162, 2778
HincII	GTYRAC	2 cut(s)	385, 2848
HindII	GTYRAC	2 cut(s)	385, 2848
HindIII	AAGCTT	2 cut(s)	1441, 1761
HpaI	GTTAAC	1 cut(s)	2848
HpaII	CCGG	6 cut(s)	48, 120, 850, 2399, 2471, 2546
Hpy188I	TCNGA	9 cut(s)	319, 337, 349, 784, 946, 1005, 1215, 1978, 1999
Hpy99I	CGWCG	2 cut(s)	95, 119
HpyCH4V	TGCA	7 cut(s)	104, 656, 711, 800, 910, 2364, 2621
HpyF10VI	GCNNNNNNNGC	8 cut(s)	38, 63, 110, 125, 653, 1082, 2052, 2771
HpyF3I	CTNAG	8 cut(s)	486, 783, 903, 2056, 2199, 2328, 2379, 2574
Hsp92I	GRCGYC	1 cut(s)	1162
Hsp92II	CATG	8 cut(s)	104, 334, 469, 554, 1272, 1630, 2669, 2774
HspAI	GCGC	4 cut(s)	824, 982, 1162, 2778
KasI	GGCGCC	1 cut(s)	1161
KroI	GCCGGC	1 cut(s)	47
KroNI	GCCGGC	1 cut(s)	49
KspAI	GTTAAC	1 cut(s)	2848
KspI	CCGCGG	1 cut(s)	161
Kzo9I	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
LguI	GCTCTTC	2 cut(s)	1700, 2280
Lsp1109I	GCAGC	7 cut(s)	723, 763, 833, 894, 2749, 2752, 2806
LweI	GCATC	4 cut(s)	688, 787, 1346, 1668
MaeI	CTAG	4 cut(s)	1554, 1791, 1910, 1956
MaeIII	GTNAC	5 cut(s)	74, 858, 864, 1547, 2581
MalI	GATC	9 cut(s)	324, 684, 1258, 1914, 1941, 2414, 2435, 2507, 2691
MboI	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
MflI	RGATCY	1 cut(s)	1939
MhlI	GDGCHC	2 cut(s)	525, 1695
MlsI	TGGCCA	1 cut(s)	1677
MluNI	TGGCCA	1 cut(s)	1677
Mly113I	GGCGCC	1 cut(s)	1162
MlyI	GAGTC	4 cut(s)	866, 1724, 1843, 1934
MmeI	TCCRAC	1 cut(s)	1838
Mox20I	TGGCCA	1 cut(s)	1677
MroNI	GCCGGC	1 cut(s)	47
MscI	TGGCCA	1 cut(s)	1677
MslI	CAYNNNNRTG	1 cut(s)	2670
Msp20I	TGGCCA	1 cut(s)	1677
MspA1I	CMGCKG	1 cut(s)	160
MspI	CCGG	6 cut(s)	48, 120, 850, 2399, 2471, 2546
MspR9I	CCNGG	5 cut(s)	371, 850, 1300, 1324, 1334
Mva1269I	GAATGC	2 cut(s)	1491, 2366
MvaI	CCWGG	4 cut(s)	371, 1300, 1324, 1334
MvnI	CGCG	2 cut(s)	160, 420
MwoI	GCNNNNNNNGC	8 cut(s)	38, 63, 110, 125, 653, 1082, 2052, 2771
NaeI	GCCGGC	1 cut(s)	49
NarI	GGCGCC	1 cut(s)	1162
NciI	CCSGG	1 cut(s)	850
NdeII	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
NgoMIV	GCCGGC	1 cut(s)	47
NlaIII	CATG	8 cut(s)	104, 334, 469, 554, 1272, 1630, 2669, 2774
NlaIV	GGNNCC	3 cut(s)	46, 127, 1163
NmuCI	GTSAC	2 cut(s)	858, 2581
NruI	TCGCGA	1 cut(s)	420
PciSI	GCTCTTC	2 cut(s)	1700, 2280
PcsI	WCGNNNNNNNCGW	2 cut(s)	70, 87
PctI	GAATGC	2 cut(s)	1491, 2366
PdiI	GCCGGC	1 cut(s)	49
PfeI	GAWTC	7 cut(s)	350, 469, 896, 947, 1265, 1471, 1842
PflFI	GACNNNGTC	1 cut(s)	89
PkrI	GCNGC	7 cut(s)	713, 753, 823, 909, 2764, 2767, 2821
PleI	GAGTC	4 cut(s)	865, 1724, 1843, 1933
PluTI	GGCGCC	1 cut(s)	1165
PpsI	GAGTC	4 cut(s)	865, 1724, 1843, 1933
PsiI	TTATAA	2 cut(s)	771, 1434
Psp124BI	GAGCTC	1 cut(s)	1695
Psp6I	CCWGG	4 cut(s)	369, 1298, 1322, 1332
PspGI	CCWGG	4 cut(s)	369, 1298, 1322, 1332
PspN4I	GGNNCC	3 cut(s)	46, 127, 1163
PspPI	GGNCC	6 cut(s)	45, 155, 991, 1799, 2473, 2548
PstI	CTGCAG	1 cut(s)	713
PsuI	RGATCY	1 cut(s)	1939
PsyI	GACNNNGTC	1 cut(s)	89
RruI	TCGCGA	1 cut(s)	420
RsaI	GTAC	4 cut(s)	549, 573, 615, 1224
RsaNI	GTAC	4 cut(s)	548, 572, 614, 1223
RseI	CAYNNNNRTG	1 cut(s)	2670
SacI	GAGCTC	1 cut(s)	1695
SacII	CCGCGG	1 cut(s)	161
SapI	GCTCTTC	2 cut(s)	1700, 2280
SatI	GCNGC	7 cut(s)	712, 752, 822, 908, 2763, 2766, 2820
Sau3AI	GATC	9 cut(s)	322, 682, 1256, 1912, 1939, 2412, 2433, 2505, 2689
Sau96I	GGNCC	6 cut(s)	45, 155, 991, 1799, 2473, 2548
ScaI	AGTACT	1 cut(s)	615
SchI	GAGTC	4 cut(s)	866, 1724, 1843, 1934
ScrFI	CCNGG	5 cut(s)	371, 850, 1300, 1324, 1334
SduI	GDGCHC	2 cut(s)	525, 1695
SfaNI	GCATC	4 cut(s)	688, 787, 1346, 1668
SfcI	CTRYAG	3 cut(s)	709, 746, 1663
SfoI	GGCGCC	1 cut(s)	1163
Sfr303I	CCGCGG	1 cut(s)	161
SgrAI	CRCCGGYG	1 cut(s)	119
SgrBI	CCGCGG	1 cut(s)	161
SinI	GGWCC	2 cut(s)	155, 991
SmiMI	CAYNNNNRTG	1 cut(s)	2670
SmlI	CTYRAG	6 cut(s)	883, 1058, 1609, 1706, 2646, 2751
SmoI	CTYRAG	6 cut(s)	883, 1058, 1609, 1706, 2646, 2751
SsiI	CCGC	6 cut(s)	20, 148, 158, 160, 2448, 2571
SspDI	GGCGCC	1 cut(s)	1161
SspI	AATATT	1 cut(s)	1564
SspMI	CTAG	4 cut(s)	1554, 1791, 1910, 1956
SstI	GAGCTC	1 cut(s)	1695
StyD4I	CCNGG	5 cut(s)	369, 848, 1298, 1322, 1332
StyI	CCWWGG	4 cut(s)	1553, 2724, 2802, 2829
TaqI	TCGA	1 cut(s)	2026
TatI	WGTACW	4 cut(s)	547, 571, 613, 1222
TfiI	GAWTC	7 cut(s)	350, 469, 896, 947, 1265, 1471, 1842
TseFI	GTSAC	2 cut(s)	858, 2581
TseI	GCWGC	7 cut(s)	711, 751, 821, 907, 2762, 2765, 2819
Tsp45I	GTSAC	2 cut(s)	858, 2581
TspGWI	ACGGA	1 cut(s)	1106
Tth111I	GACNNNGTC	1 cut(s)	89
VpaK11BI	GGWCC	2 cut(s)	155, 991
XapI	RAATTY	5 cut(s)	163, 577, 811, 834, 2063
XmaJI	CCTAGG	1 cut(s)	1553
XmiI	GTMKAC	3 cut(s)	1510, 1620, 2109
XspI	CTAG	4 cut(s)	1554, 1791, 1910, 1956
ZrmI	AGTACT	1 cut(s)	615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.