Rorug03G0090600

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000082
Physical Location & Seq
Forward (+)
7056160 .. 7059599
3440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0090600.1

Sequence Viewer

Length: 1218 bp
ATGGCAACCATGAAGTTGCTGCTCTTTTTTGCTCTATATTCTGCAGGCATTCATGTGATCTCCTCGCTTACGGACCCCAATGATGCTTCTGTGCTCCATACCTTGAAAGTGTCCTGGAAAAACACGCCACCGAGCTGGGATAATTCTTCTGATCCCTGTGGTTTTCCATGGGAAGGAGTCAGCTGCAGCGGTGCAAGGGTGACTGCATTGGGATTATCAACCATGGGCCTCATAGGGGAACTCAGTAGCTACATTGAGGGACTCACTGAACTAAACTCCTTGGACCTGTCATTCAACCCTGGACTCCAAGGTCCTCTTCCTCCACAGTTAGGGGATCTCCCAAAGTTAAATATCCTGATCCTAGCTGGCTGCAGCTTCAGTGGCAACATTCCAGATGAGTTGGGAAATCTTGAACAGCTGACGTTCTTGGCTCTGAATACAAATTACTTCACTGGTAGCATACCTCCTTCTTTAGGTAAGCTCTCCAACCTCTACTGGCTTGATGTGGCAGACAATCAATTGAGCGGACCTCTACCGATTTCGACATCCACTTCTCCAGGCTTAGACCTCTTGTTAAACGCTAAACATTTCCATTTGAACAAGAACCAGCTTTCAGGTTCTATTCCACTCGAGCTTTTCAGCTCCGAGATGATATTGATACATGCGTTACTTGACGAAAACAATTTTACTGGGAGTATTCCAATGACATTAGGACTTGTTAAAACTCTTGAGATGGTTCGGCTTGATAGAAATGCTCTGACCGGAAGTGTCCCCTCAAACCTTAACAACCTTACAAATGTCAATGAACTAAATTTGGCCAACAACAAATTGGCAGGCCCCTTGCCTGACTTGACTGGAATGAATTCTCTCAATTATGTAGACCTTAGTAACAACTCATTTGACCCATCTGAAGCTCCACTTTGGTTCTCAACCTTACCCACACTCACCACTCTGGTTATGGAATTTGGATCACTTCAAGGGCCTGTGCCAGAGAAGCTTTTCAGCCTTCCAGAATTACAGCAAGTGAGACTGAAATACAATACGTTTAATGGTACATTAAACATGGGCGATAGCATCAGTCTACAACTGGAGCTTGTGGATCTCCAGAACAATCAGATTTCCCAGCTCACTATAGGAGAAGAATACAAAGATGCATTGATACTTAAAGGGAACCCGATATGCTCCGGTAGTCTATCAAACACTACTTGGTGTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

405

Amino Acids

43.75

Weight (kDa)

4.45

Isoelectric Point (pI)

29.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 108 - 356 3.4e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 309
AccBSI CCGCTC 1 cut(s) 525
AccI GTMKAC 2 cut(s) 879, 1081
AciI CCGC 2 cut(s) 189, 525
AclWI GGATC 5 cut(s) 146, 342, 352, 976, 1107
AcoI YGGCCR 1 cut(s) 816
AcsI RAATTY 3 cut(s) 811, 862, 962
AcuI CTGAAG 2 cut(s) 361, 930
AfaI GTAC 1 cut(s) 1054
AfiI CCNNNNNNNGG 4 cut(s) 173, 235, 329, 473
AgsI TTSAA 5 cut(s) 106, 295, 413, 598, 977
AjnI CCWGG 3 cut(s) 113, 298, 556
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
Alw21I GWGCWC 1 cut(s) 96
Alw26I GTCTC 1 cut(s) 1021
AlwI GGATC 5 cut(s) 146, 342, 352, 976, 1107
Ama87I CYCGRG 1 cut(s) 629
AoxI GGCC 4 cut(s) 226, 816, 835, 980
ApeKI GCWGC 5 cut(s) 19, 183, 186, 369, 372
ApoI RAATTY 3 cut(s) 811, 862, 962
Asp700I GAANNNNTTC 2 cut(s) 862, 998
AspS9I GGNCC 7 cut(s) 73, 226, 283, 311, 527, 836, 980
AsuHPI GGTGA 2 cut(s) 211, 937
AvaI CYCGRG 1 cut(s) 629
AvaII GGWCC 4 cut(s) 73, 283, 311, 527
BaeI ACNNNNGTAYC 2 cut(s) 650, 683
BalI TGGCCA 1 cut(s) 818
Bbv12I GWGCWC 1 cut(s) 96
BbvI GCAGC 5 cut(s) 6, 170, 198, 356, 384
BccI CCATC 2 cut(s) 727, 913
BciT130I CCWGG 3 cut(s) 115, 300, 558
BcoDI GTCTC 1 cut(s) 1021
BfaI CTAG 1 cut(s) 362
BfmI CTRYAG 4 cut(s) 42, 184, 370, 1131
BisI GCNGC 5 cut(s) 20, 184, 187, 370, 373
BlsI GCNGC 5 cut(s) 21, 185, 188, 371, 374
Bme1390I CCNGG 3 cut(s) 115, 300, 558
Bme18I GGWCC 4 cut(s) 73, 283, 311, 527
BmeT110I CYCGRG 1 cut(s) 629
BmgT120I GGNCC 7 cut(s) 73, 226, 283, 311, 527, 836, 980
BmiI GGNNCC 3 cut(s) 75, 838, 1172
BmrFI CCNGG 3 cut(s) 115, 300, 558
BmrI ACTGGG 1 cut(s) 699
BmsI GCATC 3 cut(s) 73, 1083, 1141
BmuI ACTGGG 1 cut(s) 699
BplI GAGNNNNNCTC 2 cut(s) 514, 546
BpmI CTGGAG 3 cut(s) 540, 1088, 1109
BpuEI CTTGAG 1 cut(s) 749
BsaJI CCNNGG 5 cut(s) 167, 222, 279, 298, 307
BsaWI WCCGGW 2 cut(s) 761, 1184
Bsc4I CCNNNNNNNGG 4 cut(s) 173, 235, 329, 473
Bse1I ACTGG 5 cut(s) 457, 500, 694, 859, 1092
BseBI CCWGG 3 cut(s) 115, 300, 558
BseDI CCNNGG 5 cut(s) 167, 222, 279, 298, 307
BseGI GGATG 1 cut(s) 545
BseLI CCNNNNNNNGG 4 cut(s) 173, 235, 329, 473
BseMII CTCAG 1 cut(s) 256
BseNI ACTGG 5 cut(s) 457, 500, 694, 859, 1092
BseRI GAGGAG 1 cut(s) 52
BseXI GCAGC 5 cut(s) 6, 170, 198, 356, 384
BseYI CCCAGC 2 cut(s) 135, 1122
BshFI GGCC 4 cut(s) 228, 818, 837, 982
BsiHKAI GWGCWC 1 cut(s) 96
BsiHKCI CYCGRG 1 cut(s) 629
BsiSI CCGG 2 cut(s) 762, 1185
BslFI GGGAC 2 cut(s) 273, 755
BslI CCNNNNNNNGG 4 cut(s) 173, 235, 329, 473
BsmAI GTCTC 1 cut(s) 1021
BsmFI GGGAC 2 cut(s) 273, 755
BsmI GAATGC 1 cut(s) 48
BsnI GGCC 4 cut(s) 228, 818, 837, 982
BsoBI CYCGRG 1 cut(s) 629
Bsp1286I GDGCHC 1 cut(s) 96
Bsp143I GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
Bsp19I CCATGG 2 cut(s) 167, 222
BspACI CCGC 2 cut(s) 189, 525
BspANI GGCC 4 cut(s) 228, 818, 837, 982
BspCNI CTCAG 1 cut(s) 255
BspLI GGNNCC 3 cut(s) 75, 838, 1172
BspMAI CTGCAG 3 cut(s) 46, 188, 374
BspPI GGATC 5 cut(s) 146, 342, 352, 976, 1107
BsrBI CCGCTC 1 cut(s) 525
BsrI ACTGG 5 cut(s) 457, 500, 694, 859, 1092
BssECI CCNNGG 5 cut(s) 167, 222, 279, 298, 307
BssMI GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
BssT1I CCWWGG 4 cut(s) 167, 222, 279, 307
Bst2UI CCWGG 3 cut(s) 115, 300, 558
Bst4CI ACNGT 1 cut(s) 327
Bst6I CTCTTC 1 cut(s) 321
BstC8I GCNNGC 3 cut(s) 46, 367, 835
BstDEI CTNAG 3 cut(s) 242, 562, 884
BstDSI CCRYGG 2 cut(s) 167, 222
BstENI CCTNNNNNAGG 1 cut(s) 471
BstF5I GGATG 1 cut(s) 545
BstKTI GATC 6 cut(s) 60, 154, 337, 360, 971, 1102
BstMAI GTCTC 1 cut(s) 1021
BstMBI GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
BstMWI GCNNNNNNNGC 2 cut(s) 381, 994
BstNI CCWGG 3 cut(s) 115, 300, 558
BstNSI RCATGY 1 cut(s) 665
BstSCI CCNGG 3 cut(s) 113, 298, 556
BstSFI CTRYAG 4 cut(s) 42, 184, 370, 1131
BstV1I GCAGC 5 cut(s) 6, 170, 198, 356, 384
BstX2I RGATCY 2 cut(s) 334, 1099
BstXI CCANNNNNNTGG 1 cut(s) 135
BstYI RGATCY 2 cut(s) 334, 1099
BsuRI GGCC 4 cut(s) 228, 818, 837, 982
BtgI CCRYGG 2 cut(s) 167, 222
BtsCI GGATG 1 cut(s) 545
BtsIMutI CAGTG 3 cut(s) 264, 385, 450
Cac8I GCNNGC 3 cut(s) 46, 367, 835
Cfr13I GGNCC 7 cut(s) 73, 226, 283, 311, 527, 836, 980
Csp6I GTAC 1 cut(s) 1053
CviAII CATG 6 cut(s) 10, 53, 168, 223, 662, 1063
CviQI GTAC 1 cut(s) 1053
DdeI CTNAG 3 cut(s) 242, 562, 884
DpnI GATC 6 cut(s) 59, 153, 336, 359, 970, 1101
DpnII GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
DrdI GACNNNNNNGTC 1 cut(s) 309
DseDI GACNNNNNNGTC 1 cut(s) 309
EaeI YGGCCR 1 cut(s) 816
Eam1104I CTCTTC 1 cut(s) 321
EarI CTCTTC 1 cut(s) 321
Eco130I CCWWGG 4 cut(s) 167, 222, 279, 307
Eco47I GGWCC 4 cut(s) 73, 283, 311, 527
Eco57I CTGAAG 2 cut(s) 361, 930
Eco88I CYCGRG 1 cut(s) 629
EcoNI CCTNNNNNAGG 1 cut(s) 471
EcoO109I RGGNCCY 3 cut(s) 311, 836, 980
EcoRI GAATTC 1 cut(s) 862
EcoRII CCWGG 3 cut(s) 113, 298, 556
EcoT14I CCWWGG 4 cut(s) 167, 222, 279, 307
EcoT22I ATGCAT 1 cut(s) 1156
ErhI CCWWGG 4 cut(s) 167, 222, 279, 307
FaeI CATG 6 cut(s) 13, 56, 171, 226, 665, 1066
FalI AAGNNNNNCTT 4 cut(s) 300, 332, 903, 935
FaqI GGGAC 2 cut(s) 273, 755
FatI CATG 6 cut(s) 9, 52, 167, 222, 661, 1062
FblI GTMKAC 2 cut(s) 879, 1081
Fnu4HI GCNGC 5 cut(s) 20, 184, 187, 370, 373
FokI GGATG 1 cut(s) 532
Fsp4HI GCNGC 5 cut(s) 20, 184, 187, 370, 373
FspBI CTAG 1 cut(s) 362
GluI GCNGC 5 cut(s) 20, 184, 187, 370, 373
GsaI CCCAGC 2 cut(s) 139, 1126
GsuI CTGGAG 3 cut(s) 540, 1088, 1109
HaeIII GGCC 4 cut(s) 228, 818, 837, 982
HapII CCGG 2 cut(s) 762, 1185
Hin1II CATG 6 cut(s) 13, 56, 171, 226, 665, 1066
HindIII AAGCTT 1 cut(s) 995
HinfI GANTC 3 cut(s) 177, 261, 303
HpaII CCGG 2 cut(s) 762, 1185
HphI GGTGA 2 cut(s) 211, 937
Hpy166II GTNNAC 2 cut(s) 880, 1082
Hpy188I TCNGA 6 cut(s) 151, 435, 646, 759, 910, 1116
Hpy188III TCNNGA 6 cut(s) 355, 392, 410, 728, 1010, 1105
Hpy8I GTNNAC 2 cut(s) 880, 1082
HpyAV CCTTC 3 cut(s) 167, 477, 1016
HpyCH4III ACNGT 1 cut(s) 327
HpyCH4IV ACGT 2 cut(s) 422, 1043
HpyCH4V TGCA 6 cut(s) 44, 186, 194, 206, 372, 1154
HpyF10VI GCNNNNNNNGC 2 cut(s) 381, 994
HpyF3I CTNAG 3 cut(s) 242, 562, 884
HpySE526I ACGT 2 cut(s) 422, 1043
Hsp92II CATG 6 cut(s) 13, 56, 171, 226, 665, 1066
Kzo9I GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
LmnI GCTCC 5 cut(s) 99, 647, 919, 1090, 1187
Lsp1109I GCAGC 5 cut(s) 6, 170, 198, 356, 384
LweI GCATC 3 cut(s) 73, 1083, 1141
MaeI CTAG 1 cut(s) 362
MaeII ACGT 2 cut(s) 422, 1043
MaeIII GTNAC 3 cut(s) 199, 666, 887
MalI GATC 6 cut(s) 59, 153, 336, 359, 970, 1101
MbiI CCGCTC 1 cut(s) 525
MboI GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
MboII GAAGA 3 cut(s) 138, 308, 1151
MfeI CAATTG 1 cut(s) 518
MflI RGATCY 2 cut(s) 334, 1099
MhlI GDGCHC 1 cut(s) 96
MlsI TGGCCA 1 cut(s) 818
MluNI TGGCCA 1 cut(s) 818
MlyI GAGTC 3 cut(s) 186, 255, 297
MmeI TCCRAC 1 cut(s) 510
Mox20I TGGCCA 1 cut(s) 818
Mph1103I ATGCAT 1 cut(s) 1156
MroXI GAANNNNTTC 2 cut(s) 862, 998
MscI TGGCCA 1 cut(s) 818
MseI TTAA 7 cut(s) 347, 575, 720, 783, 1047, 1058, 1164
MslI CAYNNNNRTG 1 cut(s) 53
Msp20I TGGCCA 1 cut(s) 818
MspA1I CMGCKG 3 cut(s) 183, 189, 418
MspI CCGG 2 cut(s) 762, 1185
MspR9I CCNGG 3 cut(s) 115, 300, 558
MunI CAATTG 1 cut(s) 518
Mva1269I GAATGC 1 cut(s) 48
MvaI CCWGG 3 cut(s) 115, 300, 558
MwoI GCNNNNNNNGC 2 cut(s) 381, 994
NcoI CCATGG 2 cut(s) 167, 222
NdeII GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
NlaIII CATG 6 cut(s) 13, 56, 171, 226, 665, 1066
NlaIV GGNNCC 3 cut(s) 75, 838, 1172
NmuCI GTSAC 1 cut(s) 199
NsiI ATGCAT 1 cut(s) 1156
NspI RCATGY 1 cut(s) 665
PaeR7I CTCGAG 1 cut(s) 629
PctI GAATGC 1 cut(s) 48
PdmI GAANNNNTTC 2 cut(s) 862, 998
PfoI TCCNGGA 1 cut(s) 113
PkrI GCNGC 5 cut(s) 21, 185, 188, 371, 374
PleI GAGTC 3 cut(s) 185, 255, 297
PpsI GAGTC 3 cut(s) 185, 255, 297
PpuMI RGGWCCY 1 cut(s) 311
Psp5II RGGWCCY 1 cut(s) 311
Psp6I CCWGG 3 cut(s) 113, 298, 556
PspFI CCCAGC 2 cut(s) 135, 1122
PspGI CCWGG 3 cut(s) 113, 298, 556
PspN4I GGNNCC 3 cut(s) 75, 838, 1172
PspPI GGNCC 7 cut(s) 73, 226, 283, 311, 527, 836, 980
PspPPI RGGWCCY 1 cut(s) 311
PspXI VCTCGAGB 1 cut(s) 629
PstI CTGCAG 3 cut(s) 46, 188, 374
PsuI RGATCY 2 cut(s) 334, 1099
PvuII CAGCTG 2 cut(s) 183, 418
RsaI GTAC 1 cut(s) 1054
RsaNI GTAC 1 cut(s) 1053
RseI CAYNNNNRTG 1 cut(s) 53
SaqAI TTAA 7 cut(s) 347, 575, 720, 783, 1047, 1058, 1164
SatI GCNGC 5 cut(s) 20, 184, 187, 370, 373
Sau3AI GATC 6 cut(s) 57, 151, 334, 357, 968, 1099
Sau96I GGNCC 7 cut(s) 73, 226, 283, 311, 527, 836, 980
SchI GAGTC 3 cut(s) 186, 255, 297
ScrFI CCNGG 3 cut(s) 115, 300, 558
SduI GDGCHC 1 cut(s) 96
SfaNI GCATC 3 cut(s) 73, 1083, 1141
SfcI CTRYAG 4 cut(s) 42, 184, 370, 1131
Sfr274I CTCGAG 1 cut(s) 629
SinI GGWCC 4 cut(s) 73, 283, 311, 527
SlaI CTCGAG 1 cut(s) 629
SmiMI CAYNNNNRTG 1 cut(s) 53
SmlI CTYRAG 2 cut(s) 629, 728
SmoI CTYRAG 2 cut(s) 629, 728
SsiI CCGC 2 cut(s) 189, 525
SspMI CTAG 1 cut(s) 362
StyD4I CCNGG 3 cut(s) 113, 298, 556
StyI CCWWGG 4 cut(s) 167, 222, 279, 307
TaaI ACNGT 1 cut(s) 327
TaiI ACGT 2 cut(s) 425, 1046
TaqI TCGA 2 cut(s) 542, 630
Tru1I TTAA 7 cut(s) 347, 575, 720, 783, 1047, 1058, 1164
Tru9I TTAA 7 cut(s) 347, 575, 720, 783, 1047, 1058, 1164
TscAI CASTG 3 cut(s) 271, 385, 457
TseFI GTSAC 1 cut(s) 199
TseI GCWGC 5 cut(s) 19, 183, 186, 369, 372
Tsp45I GTSAC 1 cut(s) 199
TspDTI ATGAA 4 cut(s) 26, 41, 819, 875
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 3 cut(s) 271, 385, 457
VpaK11BI GGWCC 4 cut(s) 73, 283, 311, 527
XagI CCTNNNNNAGG 1 cut(s) 471
XapI RAATTY 3 cut(s) 811, 862, 962
XceI RCATGY 1 cut(s) 665
XcmI CCANNNNNNNNNTGG 2 cut(s) 826, 955
XhoI CTCGAG 1 cut(s) 629
XmiI GTMKAC 2 cut(s) 879, 1081
XmnI GAANNNNTTC 2 cut(s) 862, 998
XspI CTAG 1 cut(s) 362
Zsp2I ATGCAT 1 cut(s) 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.