Rmu_sc0006215.1_g000003

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006215.1
OG0000082
Physical Location & Seq
Forward (+)
5208 .. 7439
2232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006215.1_g000003.1.cds

Sequence Viewer

Length: 1770 bp
atggcacccacgagcttcccgctcacgctttcccggcaccctcgagcttcccgctcaatagctataatgctcaagcctacccgacaccctagagcttcccgctcacgcctacccggtacccccgaacttcccgctcaccccttcccagcaccctcgagcttccccctcactagctctaacgctcacgcctacccggcacccctgagcttccctctcacgccttcacggcaccccgagcttcctggtcactccttcctggaacttccgagctttcacactcacgccttcctggcactcccgagctgtcacgctcacgccttcccggcacccccgagttttcacgctcttgccttccggcattcccaagtcttacactcacctaccctcgacataatacacgttaatggaacattgaattcttctaccatttgtcctttgcagcaaattgaattcttttcgtgttccattaatacgagcgaaaaccaaacaaacacaagcgttcgcatattcatcattcacgaattacaaacgcttgccttcagggcactcatgcaacttacacctagcgtaacctcgtcaactcgagcacgttcgttctcttgcaagcaccacgcgcatcatatgcaatccgtatactcattcttggtatgctcaaacaaccgtatgcattctcgagcctatacttccgtcagtctcgcaatggcggaaacagaggacctaccggaagagattatagtgaatatccttactcggttgcccgtcaagtccttaatccgattcacctccgtttcaaaacgtctgcgtttcattatactgtccgatcccaaattcgccgaatcccaacttaaagcggctcgtcagcagaaaaccctcagccgcagactcctcgtctccaccgacgcccctccactcgaactcgaatccatacacttggatgatgcgccgtcgtttggagagccttcctccggtagaaagctcagtctccctttccaccagcaacccgttcgttttgtcaagctgctgggctcctgcaatggtctggtatttgtagcttttgatgagaaattgttctatatctggaatccatcggttagattcttcaagcaattacctgacccccctggattttcctcatttttttctattaccttttctggtgtcggctgtgtgtcggccaccgatgactacaaagttttggtggcctccgtttggaagacagaggtctggatgttttcatcgagagctcgcatttggaagagtgttcaagtcgctggctattcccctgccttatatgccactggtcacggaattcttctgcatgaggcgcttcattgggtggaggatgaattcgatcatgaaatccttgtctttgatttgttacaggacgagttcaggaaaatgcgtttgcctaattattttcagcaacgtcttgggttcttacctgcgctgctcggggtttcttttggaggatgcctgtgtgtatgccgtcgtcccatcactgcttgtgactctgccgatttctgggtcatgagacaatatgacgtgcgtggtggtgactcgtggactaagcttcttaacttaaagctgtccgatcctcctcagggacctattatggttatggagagcagtattattgcccagagatggacttccgacgggagctgtttggtaaatattgatcagaaaaaagaagagaagcttggcgtggttctgggtaattcgctcaagatgataccatatgaggaaagtttacttcggattactgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

589

Amino Acids

66.06

Weight (kDa)

9.01

Isoelectric Point (pI)

59.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1450
Acc65I GGTACC 1 cut(s) 116
AccB1I GGYRCC 6 cut(s) 4, 36, 116, 196, 228, 325
AccBSI CCGCTC 4 cut(s) 22, 54, 102, 134
AccI GTMKAC 1 cut(s) 633
AccII CGCG 1 cut(s) 614
AciI CCGC 7 cut(s) 20, 52, 100, 132, 704, 851, 877
AclWI GGATC 2 cut(s) 815, 1586
AcoI YGGCCR 1 cut(s) 1173
AcsI RAATTY 5 cut(s) 415, 449, 827, 1308, 1346
AcuI CTGAAG 1 cut(s) 523
AcyI GRCGYC 1 cut(s) 900
AfaI GTAC 1 cut(s) 118
AfiI CCNNNNNNNGG 6 cut(s) 950, 965, 1209, 1521, 1601, 1644
AflIII ACRYGT 1 cut(s) 397
AgsI TTSAA 5 cut(s) 415, 449, 792, 1102, 1265
AhdI GACNNNNNGTC 1 cut(s) 887
AjiI CACGTC 1 cut(s) 1543
AjnI CCWGG 4 cut(s) 241, 255, 288, 1120
AjuI GAANNNNNNNTTGG 2 cut(s) 1683, 1715
Alw21I GWGCWC 2 cut(s) 589, 1246
Alw26I GTCTC 4 cut(s) 698, 895, 986, 1525
AlwI GGATC 2 cut(s) 815, 1586
Ama87I CYCGRG 8 cut(s) 42, 154, 233, 298, 331, 582, 672, 1451
AoxI GGCC 2 cut(s) 1173, 1200
ApeKI GCWGC 3 cut(s) 439, 1018, 1447
ApoI RAATTY 5 cut(s) 415, 449, 827, 1308, 1346
AseI ATTAAT 1 cut(s) 468
Asp700I GAANNNNTTC 1 cut(s) 1067
Asp718I GGTACC 1 cut(s) 116
AspLEI GCGC 4 cut(s) 616, 943, 1327, 1447
AspS9I GGNCC 2 cut(s) 715, 1604
AsuC2I CCSGG 4 cut(s) 34, 114, 194, 323
AsuHPI GGTGA 4 cut(s) 128, 369, 772, 1565
AvaI CYCGRG 8 cut(s) 42, 154, 233, 298, 331, 582, 672, 1451
AvaII GGWCC 2 cut(s) 715, 1604
AxyI CCTNAGG 1 cut(s) 1599
BaeGI GKGCMC 1 cut(s) 547
BanI GGYRCC 6 cut(s) 4, 36, 116, 196, 228, 325
BanII GRGCYC 2 cut(s) 1028, 1246
BauI CACGAG 2 cut(s) 10, 1558
BbsI GAAGAC 1 cut(s) 1220
Bbv12I GWGCWC 2 cut(s) 589, 1246
BbvCI CCTCAGC 1 cut(s) 872
BbvI GCAGC 3 cut(s) 451, 1005, 1434
BccI CCATC 3 cut(s) 1093, 1502, 1638
BceAI ACGGC 3 cut(s) 242, 928, 1470
BcgI CGANNNNNNTGC 4 cut(s) 868, 902, 986, 1020
BciT130I CCWGG 4 cut(s) 243, 257, 290, 1122
BclI TGATCA 1 cut(s) 1678
BcnI CCSGG 4 cut(s) 34, 114, 194, 323
BcoDI GTCTC 4 cut(s) 698, 895, 986, 1525
BfaI CTAG 3 cut(s) 90, 171, 564
BfoI RGCGCY 1 cut(s) 1328
BfuAI ACCTGC 1 cut(s) 1450
BglI GCCNNNNNGGC 5 cut(s) 194, 226, 290, 323, 542
BisI GCNGC 5 cut(s) 440, 852, 877, 1019, 1448
BlsI GCNGC 5 cut(s) 441, 853, 878, 1020, 1449
Bme1390I CCNGG 8 cut(s) 34, 114, 194, 243, 257, 290, 323, 1122
Bme18I GGWCC 2 cut(s) 715, 1604
BmeRI GACNNNNNGTC 1 cut(s) 887
BmeT110I CYCGRG 8 cut(s) 42, 154, 233, 298, 331, 582, 672, 1451
BmgBI CACGTC 1 cut(s) 1543
BmgT120I GGNCC 2 cut(s) 715, 1604
BmiI GGNNCC 8 cut(s) 6, 38, 118, 198, 230, 327, 1027, 1605
BmrFI CCNGG 8 cut(s) 34, 114, 194, 243, 257, 290, 323, 1122
BmsI GCATC 3 cut(s) 625, 928, 1460
BoxI GACNNNNGTC 1 cut(s) 1220
BpiI GAAGAC 1 cut(s) 1220
BplI GAGNNNNNCTC 4 cut(s) 196, 228, 947, 979
Bpu10I CCTNAGC 2 cut(s) 203, 872
BpuEI CTTGAG 2 cut(s) 56, 1709
BpuMI CCSGG 4 cut(s) 34, 114, 194, 323
BsaHI GRCGYC 1 cut(s) 900
BsaJI CCNNGG 1 cut(s) 1120
BsaWI WCCGGW 2 cut(s) 721, 965
Bsc4I CCNNNNNNNGG 6 cut(s) 950, 965, 1209, 1521, 1601, 1644
Bse1I ACTGG 1 cut(s) 1303
Bse21I CCTNAGG 1 cut(s) 1599
Bse3DI GCAATG 2 cut(s) 705, 1039
BseBI CCWGG 4 cut(s) 243, 257, 290, 1122
BseDI CCNNGG 1 cut(s) 1120
BseGI GGATG 4 cut(s) 940, 1233, 1348, 1475
BseLI CCNNNNNNNGG 6 cut(s) 950, 965, 1209, 1521, 1601, 1644
BseMI GCAATG 2 cut(s) 705, 1039
BseMII CTCAG 4 cut(s) 194, 886, 991, 1613
BseNI ACTGG 1 cut(s) 1303
BseRI GAGGAG 2 cut(s) 875, 1587
BseSI GKGCMC 1 cut(s) 547
BseXI GCAGC 3 cut(s) 451, 1005, 1434
BseYI CCCAGC 2 cut(s) 145, 1021
Bsh1236I CGCG 1 cut(s) 614
BshFI GGCC 2 cut(s) 1175, 1202
BshNI GGYRCC 6 cut(s) 4, 36, 116, 196, 228, 325
BsiHKAI GWGCWC 2 cut(s) 589, 1246
BsiHKCI CYCGRG 8 cut(s) 42, 154, 233, 298, 331, 582, 672, 1451
BsiSI CCGG 7 cut(s) 34, 114, 194, 323, 355, 722, 966
BslFI GGGAC 2 cut(s) 1476, 1617
BslI CCNNNNNNNGG 6 cut(s) 950, 965, 1209, 1521, 1601, 1644
BsmAI GTCTC 4 cut(s) 698, 895, 986, 1525
BsmBI CGTCTC 1 cut(s) 895
BsmFI GGGAC 2 cut(s) 1476, 1617
BsmI GAATGC 2 cut(s) 358, 667
BsnI GGCC 2 cut(s) 1175, 1202
BsoBI CYCGRG 8 cut(s) 42, 154, 233, 298, 331, 582, 672, 1451
Bsp1286I GDGCHC 4 cut(s) 547, 589, 1028, 1246
Bsp143I GATC 4 cut(s) 820, 1351, 1591, 1678
BspACI CCGC 7 cut(s) 20, 52, 100, 132, 704, 851, 877
BspANI GGCC 2 cut(s) 1175, 1202
BspCNI CTCAG 4 cut(s) 195, 885, 990, 1612
BspFNI CGCG 1 cut(s) 614
BspHI TCATGA 2 cut(s) 1354, 1527
BspLI GGNNCC 8 cut(s) 6, 38, 118, 198, 230, 327, 1027, 1605
BspMI ACCTGC 1 cut(s) 1450
BspPI GGATC 2 cut(s) 815, 1586
BspT107I GGYRCC 6 cut(s) 4, 36, 116, 196, 228, 325
BsrBI CCGCTC 4 cut(s) 22, 54, 102, 134
BsrDI GCAATG 2 cut(s) 705, 1039
BsrI ACTGG 1 cut(s) 1303
BssECI CCNNGG 1 cut(s) 1120
BssMI GATC 4 cut(s) 820, 1351, 1591, 1678
BssNAI GTATAC 1 cut(s) 634
BssNI GRCGYC 1 cut(s) 900
BssSI CACGAG 2 cut(s) 10, 1558
Bst1107I GTATAC 1 cut(s) 634
Bst2BI CACGAG 2 cut(s) 10, 1558
Bst2UI CCWGG 4 cut(s) 243, 257, 290, 1122
Bst4CI ACNGT 3 cut(s) 662, 816, 1765
Bst6I CTCTTC 3 cut(s) 720, 1250, 1686
BstACI GRCGYC 1 cut(s) 900
BstAPI GCANNNNNTGC 1 cut(s) 622
BstC8I GCNNGC 4 cut(s) 534, 605, 1246, 1273
BstDEI CTNAG 5 cut(s) 203, 872, 977, 1566, 1599
BstF5I GGATG 4 cut(s) 940, 1233, 1348, 1475
BstFNI CGCG 1 cut(s) 614
BstH2I RGCGCY 1 cut(s) 1328
BstHHI GCGC 4 cut(s) 616, 943, 1327, 1447
BstKTI GATC 4 cut(s) 823, 1354, 1594, 1681
BstMAI GTCTC 4 cut(s) 698, 895, 986, 1525
BstMBI GATC 4 cut(s) 820, 1351, 1591, 1678
BstNI CCWGG 4 cut(s) 243, 257, 290, 1122
BstPAI GACNNNNGTC 1 cut(s) 1220
BstSCI CCNGG 8 cut(s) 32, 112, 192, 241, 255, 288, 321, 1120
BstSLI GKGCMC 1 cut(s) 547
BstUI CGCG 1 cut(s) 614
BstV1I GCAGC 3 cut(s) 451, 1005, 1434
BstV2I GAAGAC 1 cut(s) 1220
BstXI CCANNNNNNTGG 1 cut(s) 931
BstZ17I GTATAC 1 cut(s) 634
Bsu36I CCTNAGG 1 cut(s) 1599
BsuRI GGCC 2 cut(s) 1175, 1202
BtrI CACGTC 1 cut(s) 1543
BtsCI GGATG 4 cut(s) 940, 1233, 1348, 1475
BtsI GCAGTG 1 cut(s) 1497
BtsIMutI CAGTG 2 cut(s) 1296, 1497
BveI ACCTGC 1 cut(s) 1450
Cac8I GCNNGC 4 cut(s) 534, 605, 1246, 1273
CciI TCATGA 2 cut(s) 1354, 1527
CfoI GCGC 4 cut(s) 616, 943, 1327, 1447
Cfr13I GGNCC 2 cut(s) 715, 1604
CseI GACGC 1 cut(s) 908
Csp6I GTAC 1 cut(s) 117
CviAII CATG 4 cut(s) 550, 1319, 1355, 1528
CviQI GTAC 1 cut(s) 117
DdeI CTNAG 5 cut(s) 203, 872, 977, 1566, 1599
DpnI GATC 4 cut(s) 822, 1353, 1593, 1680
DpnII GATC 4 cut(s) 820, 1351, 1591, 1678
DriI GACNNNNNGTC 1 cut(s) 887
EaeI YGGCCR 1 cut(s) 1173
Eam1104I CTCTTC 3 cut(s) 720, 1250, 1686
Eam1105I GACNNNNNGTC 1 cut(s) 887
EarI CTCTTC 3 cut(s) 720, 1250, 1686
EciI GGCGGA 1 cut(s) 719
Ecl136II GAGCTC 1 cut(s) 1244
Eco24I GRGCYC 2 cut(s) 1028, 1246
Eco47I GGWCC 2 cut(s) 715, 1604
Eco53kI GAGCTC 1 cut(s) 1244
Eco57I CTGAAG 1 cut(s) 523
Eco81I CCTNAGG 1 cut(s) 1599
Eco88I CYCGRG 8 cut(s) 42, 154, 233, 298, 331, 582, 672, 1451
EcoICRI GAGCTC 1 cut(s) 1244
EcoO109I RGGNCCY 2 cut(s) 715, 1604
EcoRI GAATTC 4 cut(s) 415, 449, 1308, 1346
EcoRII CCWGG 4 cut(s) 241, 255, 288, 1120
EcoT22I ATGCAT 1 cut(s) 669
EcoT38I GRGCYC 2 cut(s) 1028, 1246
Esp3I CGTCTC 1 cut(s) 895
FaeI CATG 4 cut(s) 553, 1322, 1358, 1531
FalI AAGNNNNNCTT 2 cut(s) 1683, 1715
FaqI GGGAC 2 cut(s) 1476, 1617
FatI CATG 4 cut(s) 549, 1318, 1354, 1527
FauI CCCGC 4 cut(s) 27, 59, 107, 139
FauNDI CATATG 2 cut(s) 621, 1738
FbaI TGATCA 1 cut(s) 1678
FblI GTMKAC 1 cut(s) 633
Fnu4HI GCNGC 5 cut(s) 440, 852, 877, 1019, 1448
FokI GGATG 4 cut(s) 947, 1240, 1355, 1482
FriOI GRGCYC 2 cut(s) 1028, 1246
Fsp4HI GCNGC 5 cut(s) 440, 852, 877, 1019, 1448
FspBI CTAG 3 cut(s) 90, 171, 564
GlaI GCGC 4 cut(s) 615, 942, 1326, 1446
GluI GCNGC 5 cut(s) 440, 852, 877, 1019, 1448
GsaI CCCAGC 2 cut(s) 149, 1025
HaeII RGCGCY 1 cut(s) 1328
HaeIII GGCC 2 cut(s) 1175, 1202
HapII CCGG 7 cut(s) 34, 114, 194, 323, 355, 722, 966
HgaI GACGC 1 cut(s) 908
HhaI GCGC 4 cut(s) 616, 943, 1327, 1447
Hin1I GRCGYC 1 cut(s) 900
Hin1II CATG 4 cut(s) 553, 1322, 1358, 1531
Hin6I GCGC 4 cut(s) 614, 941, 1325, 1445
HinP1I GCGC 4 cut(s) 614, 941, 1325, 1445
HincII GTYRAC 1 cut(s) 579
HindII GTYRAC 1 cut(s) 579
HindIII AAGCTT 2 cut(s) 1568, 1697
HinfI GANTC 8 cut(s) 777, 836, 882, 920, 1081, 1095, 1508, 1556
HpaII CCGG 7 cut(s) 34, 114, 194, 323, 355, 722, 966
HphI GGTGA 4 cut(s) 128, 369, 772, 1565
Hpy166II GTNNAC 4 cut(s) 579, 634, 1563, 1751
Hpy188I TCNGA 7 cut(s) 267, 776, 820, 1591, 1654, 1683, 1758
Hpy8I GTNNAC 4 cut(s) 579, 634, 1563, 1751
Hpy99I CGWCG 4 cut(s) 902, 949, 1491, 1658
HpyAV CCTTC 8 cut(s) 151, 231, 262, 295, 328, 361, 547, 969
HpyCH4III ACNGT 3 cut(s) 662, 816, 1765
HpyCH4IV ACGT 5 cut(s) 399, 589, 796, 1426, 1542
HpyCH4V TGCA 7 cut(s) 439, 553, 603, 625, 667, 1032, 1318
HpyF3I CTNAG 5 cut(s) 203, 872, 977, 1566, 1599
HpySE526I ACGT 5 cut(s) 399, 589, 796, 1426, 1542
Hsp92I GRCGYC 1 cut(s) 900
Hsp92II CATG 4 cut(s) 553, 1322, 1358, 1531
HspAI GCGC 4 cut(s) 614, 941, 1325, 1445
KpnI GGTACC 1 cut(s) 120
Ksp22I TGATCA 1 cut(s) 1678
Kzo9I GATC 4 cut(s) 820, 1351, 1591, 1678
LmnI GCTCC 2 cut(s) 1031, 1659
Lsp1109I GCAGC 3 cut(s) 451, 1005, 1434
LweI GCATC 3 cut(s) 625, 928, 1460
MaeI CTAG 3 cut(s) 90, 171, 564
MaeII ACGT 5 cut(s) 399, 589, 796, 1426, 1542
MaeIII GTNAC 7 cut(s) 245, 305, 568, 1301, 1377, 1505, 1553
MalI GATC 4 cut(s) 822, 1353, 1593, 1680
MbiI CCGCTC 4 cut(s) 22, 54, 102, 134
MboI GATC 4 cut(s) 820, 1351, 1591, 1678
MboII GAAGA 7 cut(s) 411, 737, 1090, 1225, 1267, 1304, 1703
MhlI GDGCHC 4 cut(s) 547, 589, 1028, 1246
MlyI GAGTC 3 cut(s) 876, 1502, 1550
MmeI TCCRAC 1 cut(s) 1677
Mph1103I ATGCAT 1 cut(s) 669
MroXI GAANNNNTTC 1 cut(s) 1067
MseI TTAA 6 cut(s) 402, 468, 770, 846, 1575, 1580
MslI CAYNNNNRTG 2 cut(s) 402, 933
MspI CCGG 7 cut(s) 34, 114, 194, 323, 355, 722, 966
MspR9I CCNGG 8 cut(s) 34, 114, 194, 243, 257, 290, 323, 1122
Mva1269I GAATGC 2 cut(s) 358, 667
MvaI CCWGG 4 cut(s) 243, 257, 290, 1122
MvnI CGCG 1 cut(s) 614
NciI CCSGG 4 cut(s) 34, 114, 194, 323
NdeI CATATG 2 cut(s) 621, 1738
NdeII GATC 4 cut(s) 820, 1351, 1591, 1678
NlaIII CATG 4 cut(s) 553, 1322, 1358, 1531
NlaIV GGNNCC 8 cut(s) 6, 38, 118, 198, 230, 327, 1027, 1605
NmuCI GTSAC 5 cut(s) 245, 305, 1301, 1505, 1553
NsiI ATGCAT 1 cut(s) 669
PaeR7I CTCGAG 4 cut(s) 42, 154, 582, 672
PagI TCATGA 2 cut(s) 1354, 1527
PcsI WCGNNNNNNNCGW 1 cut(s) 894
PctI GAATGC 2 cut(s) 358, 667
PdmI GAANNNNTTC 1 cut(s) 1067
PfeI GAWTC 5 cut(s) 777, 836, 920, 1081, 1095
PfoI TCCNGGA 1 cut(s) 255
PkrI GCNGC 5 cut(s) 441, 853, 878, 1020, 1449
PleI GAGTC 3 cut(s) 876, 1502, 1550
PpsI GAGTC 3 cut(s) 876, 1502, 1550
PpuMI RGGWCCY 2 cut(s) 715, 1604
PshAI GACNNNNGTC 1 cut(s) 1220
PshBI ATTAAT 1 cut(s) 468
Psp124BI GAGCTC 1 cut(s) 1246
Psp5II RGGWCCY 2 cut(s) 715, 1604
Psp6I CCWGG 4 cut(s) 241, 255, 288, 1120
PspFI CCCAGC 2 cut(s) 145, 1021
PspGI CCWGG 4 cut(s) 241, 255, 288, 1120
PspN4I GGNNCC 8 cut(s) 6, 38, 118, 198, 230, 327, 1027, 1605
PspPI GGNCC 2 cut(s) 715, 1604
PspPPI RGGWCCY 2 cut(s) 715, 1604
PspXI VCTCGAGB 3 cut(s) 42, 154, 582
RsaI GTAC 1 cut(s) 118
RsaNI GTAC 1 cut(s) 117
RseI CAYNNNNRTG 2 cut(s) 402, 933
SacI GAGCTC 1 cut(s) 1246
SaqAI TTAA 6 cut(s) 402, 468, 770, 846, 1575, 1580
SatI GCNGC 5 cut(s) 440, 852, 877, 1019, 1448
Sau3AI GATC 4 cut(s) 820, 1351, 1591, 1678
Sau96I GGNCC 2 cut(s) 715, 1604
SchI GAGTC 3 cut(s) 876, 1502, 1550
ScrFI CCNGG 8 cut(s) 34, 114, 194, 243, 257, 290, 323, 1122
SduI GDGCHC 4 cut(s) 547, 589, 1028, 1246
SfaNI GCATC 3 cut(s) 625, 928, 1460
Sfr274I CTCGAG 4 cut(s) 42, 154, 582, 672
SinI GGWCC 2 cut(s) 715, 1604
SlaI CTCGAG 4 cut(s) 42, 154, 582, 672
SmiMI CAYNNNNRTG 2 cut(s) 402, 933
SmlI CTYRAG 6 cut(s) 42, 71, 154, 582, 672, 1724
SmoI CTYRAG 6 cut(s) 42, 71, 154, 582, 672, 1724
SsiI CCGC 7 cut(s) 20, 52, 100, 132, 704, 851, 877
SspI AATATT 1 cut(s) 1675
SspMI CTAG 3 cut(s) 90, 171, 564
SstI GAGCTC 1 cut(s) 1246
StyD4I CCNGG 8 cut(s) 32, 112, 192, 241, 255, 288, 321, 1120
TaaI ACNGT 3 cut(s) 662, 816, 1765
TaiI ACGT 5 cut(s) 402, 592, 799, 1429, 1545
TaqI TCGA 9 cut(s) 43, 155, 387, 583, 673, 912, 918, 1238, 1350
TauI GCSGC 2 cut(s) 854, 879
TfiI GAWTC 5 cut(s) 777, 836, 920, 1081, 1095
Tru1I TTAA 6 cut(s) 402, 468, 770, 846, 1575, 1580
Tru9I TTAA 6 cut(s) 402, 468, 770, 846, 1575, 1580
TscAI CASTG 2 cut(s) 1303, 1504
TseFI GTSAC 5 cut(s) 245, 305, 1301, 1505, 1553
TseI GCWGC 3 cut(s) 439, 1018, 1447
Tsp45I GTSAC 5 cut(s) 245, 305, 1301, 1505, 1553
TspDTI ATGAA 6 cut(s) 499, 796, 1224, 1319, 1359, 1371
TspGWI ACGGA 5 cut(s) 619, 676, 775, 1195, 1320
TspRI CASTG 2 cut(s) 1303, 1504
VpaK11BI GGWCC 2 cut(s) 715, 1604
VspI ATTAAT 1 cut(s) 468
XapI RAATTY 5 cut(s) 415, 449, 827, 1308, 1346
XhoI CTCGAG 4 cut(s) 42, 154, 582, 672
XmiI GTMKAC 1 cut(s) 633
XmnI GAANNNNTTC 1 cut(s) 1067
XspI CTAG 3 cut(s) 90, 171, 564
Zsp2I ATGCAT 1 cut(s) 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.