RchiOBHm_Chr2g0107851

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
19464604 .. 19468663
4060 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48184

Sequence Viewer

Length: 1233 bp
ATGTTTGTTTCTCACTTATACTCCCGCTCAGTGCTTATGCGCCCTCATCGCTTACGTTTTCCTTGTCACCGTGCAATGGCGGTAGCAGAAGATCTACCCGAAGATATTATAGTTAACATCCTTACTTGGTTGCCTGTGAAGTCCTTAATCCGATTCACCTCCGTTTCGAAACGCCTGCATTCCATTATATTGTCCGATCCCAAATTCGCCCAATCCCAATTGAAAGCAGCTCGTCAGCAGAAAACCCTCAGCCGCAGACTCCTCGTCTCCACCGACGCCCCTCAACTCGAATCCATACCCTTGGATCATACGCCGTCGTTTGGAGAGCCTTCGTCCGTTAGAAAGCTCAGTTTCCCTTTCCAGCCACAGTGGTCTGGTATGTCAAGTTATGTCAAGTTACTAGGCTCCTGCAATGGTCTGGTATTTGTAGCTGTTGATGAGACATTGTTTTATATCTGGAACCCATCCATTGGATTCTCCCAGCAATTACCTGACCCAGGTTTTTCCTTTAATGAAAATGTGCTGGCCTATTATGGTGTTGGCTATTTGTCTGCTACTGATGACTACAAAGTTTTAGTAGCCTCCTATCGCATTCGTGACGGGGAGTCACAGGTCCAGGTGTTCTCATTGAGAACTCATCTTTGGGAGAGGATTGAACCTCCTGGAGGCTCCGAAATTGAACTCGATCTTCAGGGGATTCTTTCGAATGAGGCACTTCATTGGACAAACTACTCCATCGTCGAGGATGAAATTGTTTCTTTTGACTTGGCAGTGCAGGAGTTCCGGAGAATGCGACTGCCTAATTTCGACCATGATGGTAGGAGTTTCAGCTATCTTGGGGTCTGTGGAGGCTGCCTGTGCGCGTCGCGTTATCTGGAGGGTGCTTGTGACTCTATTGATTTCTGGGTCATGAAAGAATATGACGTGAGTGACTCGTGGACTATGCTCTTTAGCTTAAAGCTCTCCGATCCACCTGAGTTAAACTCGTGTTCCACAGAATTCTTGGTTGTGGAAAGTAGTACAGTTGCCGCGAATTGGACTGCCAAGGGGTTCGAGTTGATAAGGATTGACCATAAAGAAGATGAGAAGCTTGGGAAGTATATGCTTAAGGGGAGTCAGATTTGTATGATTGAGTATGAAGAGAGTCTACTTTGGATTAGTAGTTATTATCCAGAACAAGAGAAAGAGCAGGTCAAGATACTCGAAACCCATCAGAAGGCCTCACAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

410

Amino Acids

46.8

Weight (kDa)

5.31

Isoelectric Point (pI)

55.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 30 - 66 6.1e-07 F-box-like
F-box PF00646 31 - 68 2.3e-09 F-box domain
FBA_3 PF08268 120 - 314 1.6e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1180
AccB7I CCANNNNNTGG 1 cut(s) 470
AccBSI CCGCTC 1 cut(s) 27
AccI GTMKAC 1 cut(s) 1147
AccII CGCG 3 cut(s) 863, 868, 1031
AccIII TCCGGA 1 cut(s) 783
AciI CCGC 4 cut(s) 25, 80, 253, 1029
AclWI GGATC 3 cut(s) 191, 312, 962
AcsI RAATTY 2 cut(s) 203, 998
AcuI CTGAAG 1 cut(s) 674
AcyI GRCGYC 1 cut(s) 276
AfaI GTAC 1 cut(s) 1021
AfiI CCNNNNNNNGG 7 cut(s) 76, 320, 470, 497, 665, 1035, 1216
AflII CTTAAG 1 cut(s) 1106
AgsI TTSAA 3 cut(s) 223, 656, 680
AhdI GACNNNNNGTC 2 cut(s) 263, 604
AjiI CACGTC 1 cut(s) 925
AjnI CCWGG 3 cut(s) 496, 615, 661
AjuI GAANNNNNNNTTGG 2 cut(s) 625, 657
AluBI AGCT 8 cut(s) 230, 346, 431, 831, 954, 961, 1090, 1230
AluI AGCT 8 cut(s) 230, 346, 431, 831, 954, 961, 1090, 1230
Alw26I GTCTC 2 cut(s) 271, 434
AlwI GGATC 3 cut(s) 191, 312, 962
Aor13HI TCCGGA 1 cut(s) 783
AoxI GGCC 2 cut(s) 525, 1218
ApeKI GCWGC 2 cut(s) 227, 852
ApoI RAATTY 2 cut(s) 203, 998
AspLEI GCGC 2 cut(s) 42, 863
AspS9I GGNCC 1 cut(s) 613
AsuHPI GGTGA 2 cut(s) 59, 148
AsuII TTCGAA 2 cut(s) 167, 704
AvaII GGWCC 1 cut(s) 613
BarI GAAGNNNNNNTAC 2 cut(s) 1131, 1163
BauI CACGAG 2 cut(s) 934, 985
BbvCI CCTCAGC 1 cut(s) 248
BbvI GCAGC 2 cut(s) 239, 839
BccI CCATC 4 cut(s) 472, 743, 809, 1218
BceAI ACGGC 1 cut(s) 298
BcgI CGANNNNNNTGC 4 cut(s) 157, 191, 244, 278
BciT130I CCWGG 3 cut(s) 498, 617, 663
BcoDI GTCTC 2 cut(s) 271, 434
BfaI CTAG 1 cut(s) 401
BfrI CTTAAG 1 cut(s) 1106
BfuAI ACCTGC 1 cut(s) 1180
BglII AGATCT 1 cut(s) 91
BisI GCNGC 4 cut(s) 228, 253, 853, 1029
BlsI GCNGC 4 cut(s) 229, 254, 854, 1030
Bme1390I CCNGG 3 cut(s) 498, 617, 663
Bme18I GGWCC 1 cut(s) 613
BmeRI GACNNNNNGTC 2 cut(s) 263, 604
BmgBI CACGTC 1 cut(s) 925
BmgT120I GGNCC 1 cut(s) 613
BmiI GGNNCC 3 cut(s) 406, 461, 670
BmrFI CCNGG 3 cut(s) 498, 617, 663
BplI GAGNNNNNCTC 2 cut(s) 968, 1000
BpmI CTGGAG 2 cut(s) 684, 896
Bpu10I CCTNAGC 1 cut(s) 248
Bpu14I TTCGAA 2 cut(s) 167, 704
BsaHI GRCGYC 1 cut(s) 276
BsaJI CCNNGG 3 cut(s) 300, 496, 1044
BsaWI WCCGGW 1 cut(s) 783
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 7 cut(s) 76, 320, 470, 497, 665, 1035, 1216
Bse3DI GCAATG 2 cut(s) 81, 418
BseAI TCCGGA 1 cut(s) 783
BseBI CCWGG 3 cut(s) 498, 617, 663
BseDI CCNNGG 3 cut(s) 300, 496, 1044
BseGI GGATG 3 cut(s) 117, 464, 751
BseLI CCNNNNNNNGG 7 cut(s) 76, 320, 470, 497, 665, 1035, 1216
BseMI GCAATG 2 cut(s) 81, 418
BseMII CTCAG 4 cut(s) 42, 262, 361, 966
BseRI GAGGAG 1 cut(s) 251
BseXI GCAGC 2 cut(s) 239, 839
BseYI CCCAGC 1 cut(s) 480
BsgI GTGCAG 1 cut(s) 794
Bsh1236I CGCG 3 cut(s) 863, 868, 1031
BshFI GGCC 2 cut(s) 527, 1220
BsiSI CCGG 1 cut(s) 784
BslI CCNNNNNNNGG 7 cut(s) 76, 320, 470, 497, 665, 1035, 1216
BsmAI GTCTC 2 cut(s) 271, 434
BsmBI CGTCTC 1 cut(s) 271
BsmI GAATGC 3 cut(s) 178, 591, 795
BsnI GGCC 2 cut(s) 527, 1220
Bsp119I TTCGAA 2 cut(s) 167, 704
Bsp13I TCCGGA 1 cut(s) 783
Bsp143I GATC 5 cut(s) 91, 196, 304, 685, 967
BspACI CCGC 4 cut(s) 25, 80, 253, 1029
BspANI GGCC 2 cut(s) 527, 1220
BspCNI CTCAG 4 cut(s) 41, 261, 360, 967
BspEI TCCGGA 1 cut(s) 783
BspFNI CGCG 3 cut(s) 863, 868, 1031
BspHI TCATGA 1 cut(s) 909
BspLI GGNNCC 3 cut(s) 406, 461, 670
BspMI ACCTGC 1 cut(s) 1180
BspPI GGATC 3 cut(s) 191, 312, 962
BspT104I TTCGAA 2 cut(s) 167, 704
BspTI CTTAAG 1 cut(s) 1106
BsrBI CCGCTC 1 cut(s) 27
BsrDI GCAATG 2 cut(s) 81, 418
BssECI CCNNGG 3 cut(s) 300, 496, 1044
BssMI GATC 5 cut(s) 91, 196, 304, 685, 967
BssNI GRCGYC 1 cut(s) 276
BssSI CACGAG 2 cut(s) 934, 985
BssT1I CCWWGG 2 cut(s) 300, 1044
Bst2BI CACGAG 2 cut(s) 934, 985
Bst2UI CCWGG 3 cut(s) 498, 617, 663
Bst4CI ACNGT 3 cut(s) 71, 369, 1024
Bst6I CTCTTC 1 cut(s) 1134
BstACI GRCGYC 1 cut(s) 276
BstAFI CTTAAG 1 cut(s) 1106
BstBI TTCGAA 2 cut(s) 167, 704
BstC8I GCNNGC 2 cut(s) 176, 525
BstDEI CTNAG 4 cut(s) 28, 248, 347, 975
BstENI CCTNNNNNAGG 2 cut(s) 495, 663
BstF5I GGATG 3 cut(s) 117, 464, 751
BstFNI CGCG 3 cut(s) 863, 868, 1031
BstHHI GCGC 2 cut(s) 42, 863
BstKTI GATC 5 cut(s) 94, 199, 307, 688, 970
BstMAI GTCTC 2 cut(s) 271, 434
BstMBI GATC 5 cut(s) 91, 196, 304, 685, 967
BstMWI GCNNNNNNNGC 2 cut(s) 48, 858
BstNI CCWGG 3 cut(s) 498, 617, 663
BstSCI CCNGG 3 cut(s) 496, 615, 661
BstUI CGCG 3 cut(s) 863, 868, 1031
BstV1I GCAGC 2 cut(s) 239, 839
BstX2I RGATCY 1 cut(s) 91
BstXI CCANNNNNNTGG 1 cut(s) 301
BstYI RGATCY 1 cut(s) 91
BsuRI GGCC 2 cut(s) 527, 1220
BtgZI GCGATG 1 cut(s) 32
BtrI CACGTC 1 cut(s) 925
BtsCI GGATG 3 cut(s) 117, 464, 751
BtsI GCAGTG 1 cut(s) 777
BtsIMutI CAGTG 3 cut(s) 36, 374, 777
BveI ACCTGC 1 cut(s) 1180
Cac8I GCNNGC 2 cut(s) 176, 525
CciI TCATGA 1 cut(s) 909
CfoI GCGC 2 cut(s) 42, 863
Cfr13I GGNCC 1 cut(s) 613
CseI GACGC 2 cut(s) 284, 852
Csp6I GTAC 1 cut(s) 1020
CviAII CATG 2 cut(s) 812, 910
CviQI GTAC 1 cut(s) 1020
DdeI CTNAG 4 cut(s) 28, 248, 347, 975
DpnI GATC 5 cut(s) 93, 198, 306, 687, 969
DpnII GATC 5 cut(s) 91, 196, 304, 685, 967
DriI GACNNNNNGTC 2 cut(s) 263, 604
Eam1104I CTCTTC 1 cut(s) 1134
Eam1105I GACNNNNNGTC 2 cut(s) 263, 604
EarI CTCTTC 1 cut(s) 1134
Eco130I CCWWGG 2 cut(s) 300, 1044
Eco147I AGGCCT 1 cut(s) 1220
Eco47I GGWCC 1 cut(s) 613
Eco57I CTGAAG 1 cut(s) 674
EcoNI CCTNNNNNAGG 2 cut(s) 495, 663
EcoRI GAATTC 1 cut(s) 998
EcoRII CCWGG 3 cut(s) 496, 615, 661
EcoT14I CCWWGG 2 cut(s) 300, 1044
ErhI CCWWGG 2 cut(s) 300, 1044
Esp3I CGTCTC 1 cut(s) 271
FaeI CATG 2 cut(s) 815, 913
FatI CATG 2 cut(s) 811, 909
FauI CCCGC 1 cut(s) 32
FblI GTMKAC 1 cut(s) 1147
Fnu4HI GCNGC 4 cut(s) 228, 253, 853, 1029
FokI GGATG 3 cut(s) 104, 451, 758
Fsp4HI GCNGC 4 cut(s) 228, 253, 853, 1029
FspBI CTAG 1 cut(s) 401
GlaI GCGC 2 cut(s) 41, 862
GluI GCNGC 4 cut(s) 228, 253, 853, 1029
GsaI CCCAGC 1 cut(s) 484
GsuI CTGGAG 2 cut(s) 684, 896
HaeIII GGCC 2 cut(s) 527, 1220
HapII CCGG 1 cut(s) 784
HgaI GACGC 2 cut(s) 284, 852
HhaI GCGC 2 cut(s) 42, 863
Hin1I GRCGYC 1 cut(s) 276
Hin1II CATG 2 cut(s) 815, 913
Hin6I GCGC 2 cut(s) 40, 861
HinP1I GCGC 2 cut(s) 40, 861
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HindIII AAGCTT 1 cut(s) 1088
HpaI GTTAAC 1 cut(s) 115
HpaII CCGG 1 cut(s) 784
HphI GGTGA 2 cut(s) 59, 148
Hpy166II GTNNAC 3 cut(s) 115, 939, 1148
Hpy188I TCNGA 6 cut(s) 152, 196, 673, 967, 1119, 1215
Hpy188III TCNNGA 7 cut(s) 457, 596, 784, 875, 910, 1172, 1195
Hpy8I GTNNAC 3 cut(s) 115, 939, 1148
Hpy99I CGWCG 4 cut(s) 278, 319, 743, 868
HpyAV CCTTC 2 cut(s) 339, 1210
HpyCH4III ACNGT 3 cut(s) 71, 369, 1024
HpyCH4IV ACGT 2 cut(s) 55, 924
HpyCH4V TGCA 4 cut(s) 74, 178, 411, 775
HpyF10VI GCNNNNNNNGC 2 cut(s) 48, 858
HpyF3I CTNAG 4 cut(s) 28, 248, 347, 975
HpySE526I ACGT 2 cut(s) 55, 924
Hsp92I GRCGYC 1 cut(s) 276
Hsp92II CATG 2 cut(s) 815, 913
HspAI GCGC 2 cut(s) 40, 861
Kpn2I TCCGGA 1 cut(s) 783
KspAI GTTAAC 1 cut(s) 115
Kzo9I GATC 5 cut(s) 91, 196, 304, 685, 967
LmnI GCTCC 2 cut(s) 410, 674
Lsp1109I GCAGC 2 cut(s) 239, 839
MaeI CTAG 1 cut(s) 401
MaeII ACGT 2 cut(s) 55, 924
MaeIII GTNAC 6 cut(s) 65, 396, 596, 606, 887, 929
MalI GATC 5 cut(s) 93, 198, 306, 687, 969
MbiI CCGCTC 1 cut(s) 27
MboI GATC 5 cut(s) 91, 196, 304, 685, 967
MboII GAAGA 5 cut(s) 101, 113, 680, 1091, 1151
MfeI CAATTG 1 cut(s) 218
MflI RGATCY 1 cut(s) 91
MluCI AATT 8 cut(s) 203, 218, 485, 675, 750, 802, 998, 1033
MlyI GAGTC 6 cut(s) 252, 614, 884, 926, 1123, 1153
MroI TCCGGA 1 cut(s) 783
MseI TTAA 6 cut(s) 114, 146, 510, 956, 980, 1107
MspCI CTTAAG 1 cut(s) 1106
MspI CCGG 1 cut(s) 784
MspR9I CCNGG 3 cut(s) 498, 617, 663
MunI CAATTG 1 cut(s) 218
Mva1269I GAATGC 3 cut(s) 178, 591, 795
MvaI CCWGG 3 cut(s) 498, 617, 663
MvnI CGCG 3 cut(s) 863, 868, 1031
MwoI GCNNNNNNNGC 2 cut(s) 48, 858
NdeII GATC 5 cut(s) 91, 196, 304, 685, 967
NlaIII CATG 2 cut(s) 815, 913
NlaIV GGNNCC 3 cut(s) 406, 461, 670
NmuCI GTSAC 5 cut(s) 65, 596, 606, 887, 929
NspV TTCGAA 2 cut(s) 167, 704
PagI TCATGA 1 cut(s) 909
PceI AGGCCT 1 cut(s) 1220
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PctI GAATGC 3 cut(s) 178, 591, 795
PfeI GAWTC 4 cut(s) 153, 290, 474, 697
PflMI CCANNNNNTGG 1 cut(s) 470
PfoI TCCNGGA 1 cut(s) 661
PkrI GCNGC 4 cut(s) 229, 254, 854, 1030
PleI GAGTC 6 cut(s) 252, 613, 884, 926, 1122, 1152
PpsI GAGTC 6 cut(s) 252, 613, 884, 926, 1122, 1152
Psp6I CCWGG 3 cut(s) 496, 615, 661
PspFI CCCAGC 1 cut(s) 480
PspGI CCWGG 3 cut(s) 496, 615, 661
PspN4I GGNNCC 3 cut(s) 406, 461, 670
PspPI GGNCC 1 cut(s) 613
PsuI RGATCY 1 cut(s) 91
RsaI GTAC 1 cut(s) 1021
RsaNI GTAC 1 cut(s) 1020
SaqAI TTAA 6 cut(s) 114, 146, 510, 956, 980, 1107
SatI GCNGC 4 cut(s) 228, 253, 853, 1029
Sau3AI GATC 5 cut(s) 91, 196, 304, 685, 967
Sau96I GGNCC 1 cut(s) 613
SchI GAGTC 6 cut(s) 252, 614, 884, 926, 1123, 1153
ScrFI CCNGG 3 cut(s) 498, 617, 663
SfuI TTCGAA 2 cut(s) 167, 704
SinI GGWCC 1 cut(s) 613
SmlI CTYRAG 1 cut(s) 1106
SmoI CTYRAG 1 cut(s) 1106
Sse9I AATT 8 cut(s) 203, 218, 485, 675, 750, 802, 998, 1033
SseBI AGGCCT 1 cut(s) 1220
SsiI CCGC 4 cut(s) 25, 80, 253, 1029
SspMI CTAG 1 cut(s) 401
StuI AGGCCT 1 cut(s) 1220
StyD4I CCNGG 3 cut(s) 496, 615, 661
StyI CCWWGG 2 cut(s) 300, 1044
TaaI ACNGT 3 cut(s) 71, 369, 1024
TaiI ACGT 2 cut(s) 58, 927
TaqI TCGA 8 cut(s) 167, 288, 684, 704, 741, 807, 1053, 1203
TasI AATT 8 cut(s) 203, 218, 485, 675, 750, 802, 998, 1033
TatI WGTACW 1 cut(s) 1019
TauI GCSGC 2 cut(s) 255, 1031
TfiI GAWTC 4 cut(s) 153, 290, 474, 697
Tru1I TTAA 6 cut(s) 114, 146, 510, 956, 980, 1107
Tru9I TTAA 6 cut(s) 114, 146, 510, 956, 980, 1107
TscAI CASTG 3 cut(s) 36, 374, 777
TseFI GTSAC 5 cut(s) 65, 596, 606, 887, 929
TseI GCWGC 2 cut(s) 227, 852
Tsp45I GTSAC 5 cut(s) 65, 596, 606, 887, 929
TspDTI ATGAA 5 cut(s) 528, 707, 762, 926, 1152
TspGWI ACGGA 2 cut(s) 151, 325
TspRI CASTG 3 cut(s) 36, 374, 777
Van91I CCANNNNNTGG 1 cut(s) 470
Vha464I CTTAAG 1 cut(s) 1106
VpaK11BI GGWCC 1 cut(s) 613
XagI CCTNNNNNAGG 2 cut(s) 495, 663
XapI RAATTY 2 cut(s) 203, 998
XcmI CCANNNNNNNNNTGG 1 cut(s) 1000
XmiI GTMKAC 1 cut(s) 1147
XspI CTAG 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.