Prupe.7G008100_v2.0.a1

F-box-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000082
Physical Location & Seq
Reverse (-)
1149232 .. 1151857
2626 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G008100.1

Sequence Viewer

Length: 1524 bp
ATGGCGAACAAGAAATTGCAGAAGACCCACGTACCTGATGATATTTTAGTCAAAATTCTCTCCAGGTTGCCAGTCAAATCCTTGATCCGATTCATCTGCGTCTCAAATCGCTGGCGTTTTCTGTTGTACGACCCGCAATTCGCCAAATACCACTTCAAAGTAGCTTCTGAGCAACAAACACTGAGTCCCAGCCTCCTCATCTCCACTGCCTCTGAGCTCCGATCCGTACACTTGGAAACGCCGTCGTTTGCAATTGGTGGAAATTCTTTGGTCAGAAATCTCAGCTTCCCATTGAAGCAACAGGGCCGCGCTGTCAAGGTACTGGGCTCCTGCAATGGTTTGGTGTGCGTAGCTCTTGATTTTCATGAATGCTTTTATATCTGGAACCCATCCACTAGATTCTTGCAGAAACTACCTGACCCAGATTTCGGGTCAGAAGAAATTAGGAGGCATTACAAATATGGTTTTGGTTATGCATCCACCATTGATGACTACAAAGTTGTTGTGGGCGCGGAGTTGACGTATGAAACTGACAGAGCTAACAAATACCCTGTTGTGGTCTTCTCATTGAGAGCCAACTCCTGGAAAAAGATTCAAGCTCCCCTTTCACCCCATGGGCATAGTGAGGGGGCTCTTTCAAATGAGGCACTCCATTGGCTGCACACATCATGTAGGCCACAACCAGTAGCAATTGCTTTTGATTTGGCAAAGGAGGAGTTCCGAAATGTAATGTTGCCAATTTGTGAACAAAATGAGTTGGGTTACAGACGAGTGGGGGTTCTTTTAGAAGGGTGCCTGTGTGCATGGGCTAATGGATTTCCTGATTTTGAATATCTTGAAATCTGGGTCATGAGAGAATATAATGTGTATGAATCATGGACTGTGCTATTTAAGGTTGCCAATGATGTACCTATCTTCATTAGGGAAAGTGGTACAGTTGTGATGCGGGATCGTAATTCCAAGAATGTGGAGTTGATATGGCTTGATAAAAACCAAGACAAGTTTAAAAAGGATGTGGTTTCACGTGAGCGATATATGATTCAGGGGCTTGACTCTGGAAATGACCTGACTCAATATGTTGAGACTCTGCTACCTTTCGTCTCCATCGTTTGCGATCAACAAACGCCAGTAGTAGCAATTCCTGTTTCACATCTGATCACTGTCCAAGAGATCACTGTTCAGAACATCAGCATTATGGTTCCAATGAAACTCACTGGCCCTAATTTCACCGTATGGAAATGGCTATTTCTTCAAGTTCTCAGGAAATATAGAGTAGAAGGTTTGGTTGAAGGGACAGAGATCTGTCCACCTGCTTTTTTGTTTGATACCAATGGTAAAATCACCAATCAAGTGAATCCAGCCTTCGAAAAATGGATGGATCGGGATCAAAGTGTAATGGTTTGGCTTAATTCAAGAATCTCTGAAGATTTATTGCCATATACAGTTGGGGCTTCTTCCTCTCACGCACTCTGGATGATCATGAAGAAACGGTTTGCCGATGCTTCTGATAGTCCCTTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

508

Amino Acids

58.07

Weight (kDa)

7.95

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1318
Acc36I ACCTGC 1 cut(s) 1318
AccB1I GGYRCC 1 cut(s) 792
AccB7I CCANNNNNTGG 1 cut(s) 582
AccII CGCG 2 cut(s) 309, 512
AciI CCGC 4 cut(s) 134, 307, 512, 946
AclWI GGATC 5 cut(s) 79, 216, 957, 1386, 1392
AcsI RAATTY 2 cut(s) 54, 262
AcuI CTGAAG 1 cut(s) 1443
AcvI CACGTG 1 cut(s) 1025
AfaI GTAC 6 cut(s) 33, 128, 228, 321, 909, 934
AfiI CCNNNNNNNGG 3 cut(s) 428, 556, 582
AgsI TTSAA 9 cut(s) 157, 295, 596, 639, 830, 839, 1253, 1289, 1413
AjnI CCWGG 2 cut(s) 62, 581
AjuI GAANNNNNNNTTGG 2 cut(s) 137, 169
AluBI AGCT 6 cut(s) 164, 217, 285, 353, 539, 599
AluI AGCT 6 cut(s) 164, 217, 285, 353, 539, 599
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 3 cut(s) 106, 1076, 1105
AlwI GGATC 5 cut(s) 79, 216, 957, 1386, 1392
AoxI GGCC 3 cut(s) 304, 674, 1216
ApeKI GCWGC 1 cut(s) 658
ApoI RAATTY 2 cut(s) 54, 262
ArsI GACNNNNNNTTYG 6 cut(s) 122, 154, 169, 201, 410, 442
AspLEI GCGC 2 cut(s) 311, 512
AspS9I GGNCC 2 cut(s) 304, 1217
AsuHPI GGTGA 3 cut(s) 600, 1219, 1333
AsuII TTCGAA 1 cut(s) 1365
BaeI ACNNNNGTAYC 4 cut(s) 15, 48, 924, 957
BanI GGYRCC 1 cut(s) 792
BanII GRGCYC 3 cut(s) 219, 329, 634
BbrPI CACGTG 1 cut(s) 1025
BbsI GAAGAC 2 cut(s) 29, 553
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 1 cut(s) 645
BccI CCATC 3 cut(s) 397, 1112, 1369
BceAI ACGGC 1 cut(s) 226
BcgI CGANNNNNNTGC 2 cut(s) 78, 112
BciT130I CCWGG 2 cut(s) 64, 583
BclI TGATCA 2 cut(s) 1155, 1476
BcoDI GTCTC 3 cut(s) 106, 1076, 1105
BfaI CTAG 1 cut(s) 396
BfuAI ACCTGC 1 cut(s) 1318
BglII AGATCT 1 cut(s) 1299
BisI GCNGC 2 cut(s) 307, 659
BlsI GCNGC 2 cut(s) 308, 660
Bme1390I CCNGG 2 cut(s) 64, 583
BmgT120I GGNCC 2 cut(s) 304, 1217
BmiI GGNNCC 4 cut(s) 328, 386, 794, 1200
BmrFI CCNGG 2 cut(s) 64, 583
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 3 cut(s) 485, 933, 1489
BmuI ACTGGG 1 cut(s) 332
BpiI GAAGAC 2 cut(s) 29, 553
BpmI CTGGAG 1 cut(s) 46
Bpu14I TTCGAA 1 cut(s) 1365
BsaAI YACGTR 2 cut(s) 31, 1025
BsaBI GATNNNNATC 1 cut(s) 1383
BsaJI CCNNGG 1 cut(s) 613
BsaXI ACNNNNNCTCC 2 cut(s) 506, 536
Bsc4I CCNNNNNNNGG 3 cut(s) 428, 556, 582
Bse1I ACTGG 5 cut(s) 71, 327, 683, 1127, 1219
Bse3DI GCAATG 1 cut(s) 340
Bse8I GATNNNNATC 1 cut(s) 1383
BseBI CCWGG 2 cut(s) 64, 583
BseDI CCNNGG 1 cut(s) 613
BseGI GGATG 5 cut(s) 389, 476, 1018, 1380, 1479
BseJI GATNNNNATC 1 cut(s) 1383
BseLI CCNNNNNNNGG 3 cut(s) 428, 556, 582
BseMI GCAATG 1 cut(s) 340
BseMII CTCAG 5 cut(s) 159, 173, 204, 295, 1273
BseNI ACTGG 5 cut(s) 71, 327, 683, 1127, 1219
BseRI GAGGAG 2 cut(s) 185, 728
BseXI GCAGC 1 cut(s) 645
BseYI CCCAGC 1 cut(s) 188
BsgI GTGCAG 1 cut(s) 644
Bsh1236I CGCG 2 cut(s) 309, 512
BshFI GGCC 3 cut(s) 306, 676, 1218
BshNI GGYRCC 1 cut(s) 792
BsiHKAI GWGCWC 1 cut(s) 219
BslFI GGGAC 3 cut(s) 171, 1306, 1497
BslI CCNNNNNNNGG 3 cut(s) 428, 556, 582
BsmAI GTCTC 3 cut(s) 106, 1076, 1105
BsmBI CGTCTC 2 cut(s) 106, 1105
BsmFI GGGAC 3 cut(s) 171, 1306, 1497
BsmI GAATGC 1 cut(s) 374
BsnI GGCC 3 cut(s) 306, 676, 1218
Bsp119I TTCGAA 1 cut(s) 1365
Bsp1286I GDGCHC 3 cut(s) 219, 329, 634
Bsp19I CCATGG 1 cut(s) 613
BspACI CCGC 4 cut(s) 134, 307, 512, 946
BspANI GGCC 3 cut(s) 306, 676, 1218
BspCNI CTCAG 5 cut(s) 160, 174, 205, 294, 1272
BspFNI CGCG 2 cut(s) 309, 512
BspHI TCATGA 3 cut(s) 364, 849, 1479
BspLI GGNNCC 4 cut(s) 328, 386, 794, 1200
BspMI ACCTGC 1 cut(s) 1318
BspPI GGATC 5 cut(s) 79, 216, 957, 1386, 1392
BspT104I TTCGAA 1 cut(s) 1365
BspT107I GGYRCC 1 cut(s) 792
BsrDI GCAATG 1 cut(s) 340
BsrI ACTGG 5 cut(s) 71, 327, 683, 1127, 1219
BssECI CCNNGG 1 cut(s) 613
BssT1I CCWWGG 1 cut(s) 613
Bst2UI CCWGG 2 cut(s) 64, 583
Bst4CI ACNGT 7 cut(s) 883, 937, 1162, 1177, 1231, 1444, 1491
BstBAI YACGTR 2 cut(s) 31, 1025
BstBI TTCGAA 1 cut(s) 1365
BstC8I GCNNGC 1 cut(s) 113
BstDEI CTNAG 5 cut(s) 168, 182, 213, 281, 1259
BstDSI CCRYGG 1 cut(s) 613
BstF5I GGATG 5 cut(s) 389, 476, 1018, 1380, 1479
BstFNI CGCG 2 cut(s) 309, 512
BstHHI GCGC 2 cut(s) 311, 512
BstMAI GTCTC 3 cut(s) 106, 1076, 1105
BstNI CCWGG 2 cut(s) 64, 583
BstSCI CCNGG 2 cut(s) 62, 581
BstUI CGCG 2 cut(s) 309, 512
BstV1I GCAGC 1 cut(s) 645
BstV2I GAAGAC 2 cut(s) 29, 553
BstX2I RGATCY 1 cut(s) 1299
BstXI CCANNNNNNTGG 1 cut(s) 967
BstYI RGATCY 1 cut(s) 1299
BsuRI GGCC 3 cut(s) 306, 676, 1218
BtgI CCRYGG 1 cut(s) 613
BtsCI GGATG 5 cut(s) 389, 476, 1018, 1380, 1479
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 5 cut(s) 179, 204, 1158, 1173, 1212
BveI ACCTGC 1 cut(s) 1318
Cac8I GCNNGC 1 cut(s) 113
CciI TCATGA 3 cut(s) 364, 849, 1479
CfoI GCGC 2 cut(s) 311, 512
Cfr13I GGNCC 2 cut(s) 304, 1217
CseI GACGC 1 cut(s) 88
Csp6I GTAC 6 cut(s) 32, 127, 227, 320, 908, 933
CviAII CATG 7 cut(s) 365, 614, 669, 804, 850, 876, 1480
CviQI GTAC 6 cut(s) 32, 127, 227, 320, 908, 933
DdeI CTNAG 5 cut(s) 168, 182, 213, 281, 1259
DraI TTTAAA 1 cut(s) 1006
Ecl136II GAGCTC 1 cut(s) 217
Eco130I CCWWGG 1 cut(s) 613
Eco24I GRGCYC 3 cut(s) 219, 329, 634
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 1443
Eco72I CACGTG 1 cut(s) 1025
EcoICRI GAGCTC 1 cut(s) 217
EcoRII CCWGG 2 cut(s) 62, 581
EcoT14I CCWWGG 1 cut(s) 613
EcoT22I ATGCAT 1 cut(s) 478
EcoT38I GRGCYC 3 cut(s) 219, 329, 634
ErhI CCWWGG 1 cut(s) 613
Esp3I CGTCTC 2 cut(s) 106, 1105
FaeI CATG 7 cut(s) 368, 617, 672, 807, 853, 879, 1483
FalI AAGNNNNNCTT 2 cut(s) 588, 620
FaqI GGGAC 3 cut(s) 171, 1306, 1497
FatI CATG 7 cut(s) 364, 613, 668, 803, 849, 875, 1479
FauI CCCGC 2 cut(s) 141, 939
FbaI TGATCA 2 cut(s) 1155, 1476
Fnu4HI GCNGC 2 cut(s) 307, 659
FokI GGATG 5 cut(s) 376, 463, 1025, 1387, 1486
FriOI GRGCYC 3 cut(s) 219, 329, 634
Fsp4HI GCNGC 2 cut(s) 307, 659
FspBI CTAG 1 cut(s) 396
GlaI GCGC 2 cut(s) 310, 511
GluI GCNGC 2 cut(s) 307, 659
GsaI CCCAGC 1 cut(s) 192
GsuI CTGGAG 1 cut(s) 46
HaeIII GGCC 3 cut(s) 306, 676, 1218
HgaI GACGC 1 cut(s) 88
HhaI GCGC 2 cut(s) 311, 512
Hin1II CATG 7 cut(s) 368, 617, 672, 807, 853, 879, 1483
Hin6I GCGC 2 cut(s) 309, 510
HinP1I GCGC 2 cut(s) 309, 510
HincII GTYRAC 1 cut(s) 519
HindII GTYRAC 1 cut(s) 519
HphI GGTGA 3 cut(s) 600, 1219, 1333
Hpy166II GTNNAC 4 cut(s) 229, 519, 746, 1307
Hpy8I GTNNAC 4 cut(s) 229, 519, 746, 1307
Hpy99I CGWCG 1 cut(s) 247
HpyAV CCTTC 4 cut(s) 782, 1271, 1283, 1372
HpyCH4III ACNGT 7 cut(s) 883, 937, 1162, 1177, 1231, 1444, 1491
HpyCH4IV ACGT 3 cut(s) 30, 521, 1024
HpyCH4V TGCA 7 cut(s) 19, 251, 333, 406, 476, 661, 803
HpyF3I CTNAG 5 cut(s) 168, 182, 213, 281, 1259
HpySE526I ACGT 3 cut(s) 30, 521, 1024
Hsp92II CATG 7 cut(s) 368, 617, 672, 807, 853, 879, 1483
HspAI GCGC 2 cut(s) 309, 510
Ksp22I TGATCA 2 cut(s) 1155, 1476
LmnI GCTCC 3 cut(s) 222, 332, 604
Lsp1109I GCAGC 1 cut(s) 645
LweI GCATC 3 cut(s) 485, 933, 1489
MaeI CTAG 1 cut(s) 396
MaeII ACGT 3 cut(s) 30, 521, 1024
MaeIII GTNAC 1 cut(s) 761
MboII GAAGA 8 cut(s) 34, 449, 553, 907, 1241, 1436, 1446, 1495
MfeI CAATTG 2 cut(s) 252, 690
MflI RGATCY 1 cut(s) 1299
MhlI GDGCHC 3 cut(s) 219, 329, 634
MlyI GAGTC 4 cut(s) 193, 1046, 1063, 1078
MnlI CCTC 8 cut(s) 203, 206, 220, 441, 619, 637, 706, 1468
Mph1103I ATGCAT 1 cut(s) 478
MseI TTAA 3 cut(s) 891, 1005, 1407
MspR9I CCNGG 2 cut(s) 64, 583
MunI CAATTG 2 cut(s) 252, 690
Mva1269I GAATGC 1 cut(s) 374
MvaI CCWGG 2 cut(s) 64, 583
MvnI CGCG 2 cut(s) 309, 512
NcoI CCATGG 1 cut(s) 613
NlaIII CATG 7 cut(s) 368, 617, 672, 807, 853, 879, 1483
NlaIV GGNNCC 4 cut(s) 328, 386, 794, 1200
NsiI ATGCAT 1 cut(s) 478
NspV TTCGAA 1 cut(s) 1365
PagI TCATGA 3 cut(s) 364, 849, 1479
PaqCI CACCTGC 1 cut(s) 1318
PcsI WCGNNNNNNNCGW 1 cut(s) 1104
PctI GAATGC 1 cut(s) 374
PfeI GAWTC 7 cut(s) 90, 399, 592, 872, 1039, 1354, 1416
PflMI CCANNNNNTGG 1 cut(s) 582
PfoI TCCNGGA 1 cut(s) 581
PkrI GCNGC 2 cut(s) 308, 660
PleI GAGTC 4 cut(s) 192, 1046, 1063, 1078
PmaCI CACGTG 1 cut(s) 1025
PmlI CACGTG 1 cut(s) 1025
PpsI GAGTC 4 cut(s) 192, 1046, 1063, 1078
Ppu21I YACGTR 2 cut(s) 31, 1025
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 2 cut(s) 62, 581
PspCI CACGTG 1 cut(s) 1025
PspFI CCCAGC 1 cut(s) 188
PspGI CCWGG 2 cut(s) 62, 581
PspN4I GGNNCC 4 cut(s) 328, 386, 794, 1200
PspPI GGNCC 2 cut(s) 304, 1217
PsuI RGATCY 1 cut(s) 1299
RsaI GTAC 6 cut(s) 33, 128, 228, 321, 909, 934
RsaNI GTAC 6 cut(s) 32, 127, 227, 320, 908, 933
SacI GAGCTC 1 cut(s) 219
SaqAI TTAA 3 cut(s) 891, 1005, 1407
SatI GCNGC 2 cut(s) 307, 659
Sau96I GGNCC 2 cut(s) 304, 1217
SchI GAGTC 4 cut(s) 193, 1046, 1063, 1078
ScrFI CCNGG 2 cut(s) 64, 583
SduI GDGCHC 3 cut(s) 219, 329, 634
SfaNI GCATC 3 cut(s) 485, 933, 1489
SfuI TTCGAA 1 cut(s) 1365
SsiI CCGC 4 cut(s) 134, 307, 512, 946
SspMI CTAG 1 cut(s) 396
SstI GAGCTC 1 cut(s) 219
StyD4I CCNGG 2 cut(s) 62, 581
StyI CCWWGG 1 cut(s) 613
TaaI ACNGT 7 cut(s) 883, 937, 1162, 1177, 1231, 1444, 1491
TaiI ACGT 3 cut(s) 33, 524, 1027
TaqI TCGA 1 cut(s) 1365
TauI GCSGC 1 cut(s) 309
TfiI GAWTC 7 cut(s) 90, 399, 592, 872, 1039, 1354, 1416
Tru1I TTAA 3 cut(s) 891, 1005, 1407
Tru9I TTAA 3 cut(s) 891, 1005, 1407
TscAI CASTG 5 cut(s) 186, 211, 1165, 1180, 1219
TseI GCWGC 1 cut(s) 658
TspDTI ATGAA 8 cut(s) 82, 353, 381, 540, 885, 907, 1220, 1496
TspGWI ACGGA 1 cut(s) 214
TspRI CASTG 5 cut(s) 186, 211, 1165, 1180, 1219
Van91I CCANNNNNTGG 1 cut(s) 582
XapI RAATTY 2 cut(s) 54, 262
XspI CTAG 1 cut(s) 396
Zsp2I ATGCAT 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.