Rorug02G0162800

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000082
Physical Location & Seq
Forward (+)
14530746 .. 14532648
1903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0162800.1

Sequence Viewer

Length: 1473 bp
ATGGTGCCAAGTAAAAGAAGACAAATATGCAGCAATGCAAACCCAAATAACAAAAGGCTCAAAAAGCAAGACCAAACAAAGGAAGGTGAAAAGCAGGTTGATCGAAACGCCATGGCTGTGGACACATTGCTACCTCACCTTCCAGACCTTATTGTTCACAAGATTTTCCGACTCATTCCCACTAAACTTGCCATACGCTCAGCCATTGTTTCCAAACAATGGGCAACTGTGTGGTCTTTGGGAGTCCCTCTCTTAGATTTCGATGACGAGGGGGACTCTACTGATCATGATGGTGACAATCTCGTCCGCAGGAAGCTGTTGTTCATCGACTTTGTGGAAAACTGTTTGAAACATTGTGAGAAAAACAAGCCTTTGCAGTTGGATAGTTTCAGGCTTCGAATGAGATATGATTCTGAATTAATAGGAGCGACAAGAATAGACAAGTGGTTTAGTTTTGTGGTTGATAGATGCGTCAAAGAGTTAGATATCAGCATTCAAAGAAAAGATGACAATGATCCGGTCGAACGCACATACTACTGCATACCCCATACCATTCTCAATGCGCAATTTCTTACTAGTCTGAATCTAGAGCATGTGAGAATACCGGAGAGTAATGATCTGATAAGCCTTCCGTCGTTGAAAACTATGTCCCTAAACGCTGTGCTGTTTGATTGCTGCATTGATTTGGATAGATCACTCTGGATGGGCTGTCCTTCCATCGAGCATTTGTCGCTAGTTTCGTGTTCTTTTAGCTCATTGGAGAACTGGTGGCAGATCGCTGTCAAAAATTCCAGTCTTAAATTCTTGCAGGTTATGTATTGCAAGTGCAAGTCTTTTCAAGTTGAAGCTGAGAATCTTGAATCTTTTATATTCACTTCAGATTTTTCTCAACTTGAGTTCATCCGCTTGTTTAGAGAATGCGTCAAGTTGAAATATATCAACGTTTATGCTCAGCATGCGAAGATTAACTTTGGAATGCCCGGAACATGTCGAGATAATGTAAAGGCCACTATTGATATTCCAAATCTCCAAGTTTTTGACTACGATGGTGGTTATTTGCTGCCTAATGATGTAATCTCTGTGAAAGCTCGAAATCCATTGATTGCATTTATCAAGTTTAATTGGGATGATGAAGAAGTTCTAGATCCCACTTTCCTCCCTCCATGGACACATTTTCCTACTTGGAGATATTTTCTTCAAAACTTTGATTGCTGCAATAAAGTGGTGCTAGATATCCGTCATGATGCCGTTGCTGAGGCTCTCACATTTCCAGAAAATTTCAGGCAGACATTCTCACCACCGTTATCGAATCTCAAGTATCTCAGTGTCTCGATTGTACGTCTTCGTTGTCCGCAAACAATGGCCAGAGTTTCAGCCTTGACGGACTCTTTGCGTTGGATGGCACCACATGCATGGTTTACATCAACTTACTGGGACTATGATGAGCCTGAAACTTCAGAGGAAGATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

490

Amino Acids

56.97

Weight (kDa)

5.75

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 130 - 317 5.8e-08 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 302
Acc16I TGCGCA 1 cut(s) 564
Acc36I ACCTGC 2 cut(s) 85, 799
AccB1I GGYRCC 2 cut(s) 4, 1402
AccB7I CCANNNNNTGG 1 cut(s) 219
AciI CCGC 3 cut(s) 307, 904, 1352
AclI AACGTT 1 cut(s) 942
AclWI GGATC 2 cut(s) 509, 1139
AcoI YGGCCR 1 cut(s) 1362
AcsI RAATTY 3 cut(s) 787, 800, 1276
AcuI CTGAAG 2 cut(s) 861, 1440
AfaI GTAC 1 cut(s) 1338
AfiI CCNNNNNNNGG 2 cut(s) 79, 219
AflIII ACRYGT 1 cut(s) 986
AgsI TTSAA 8 cut(s) 349, 497, 640, 839, 845, 860, 931, 1199
AhlI ACTAGT 1 cut(s) 575
AluBI AGCT 4 cut(s) 316, 753, 848, 1088
AluI AGCT 4 cut(s) 316, 753, 848, 1088
Alw26I GTCTC 1 cut(s) 1333
AlwI GGATC 2 cut(s) 509, 1139
AoxI GGCC 2 cut(s) 1005, 1362
ApeKI GCWGC 4 cut(s) 30, 675, 1060, 1212
ApoI RAATTY 3 cut(s) 787, 800, 1276
ArsI GACNNNNNNTTYG 2 cut(s) 1372, 1404
AseI ATTAAT 1 cut(s) 419
Asp700I GAANNNNTTC 1 cut(s) 1137
AspLEI GCGC 1 cut(s) 565
AsuC2I CCSGG 1 cut(s) 981
AsuHPI GGTGA 4 cut(s) 98, 128, 305, 1287
AsuII TTCGAA 1 cut(s) 397
BalI TGGCCA 1 cut(s) 1364
BanI GGYRCC 2 cut(s) 4, 1402
BbsI GAAGAC 2 cut(s) 25, 1334
BbvCI CCTCAGC 1 cut(s) 1254
BbvI GCAGC 4 cut(s) 42, 662, 1047, 1199
BccI CCATC 5 cut(s) 284, 697, 725, 1040, 1393
BceAI ACGGC 1 cut(s) 1232
BcgI CGANNNNNNTGC 2 cut(s) 83, 117
BclI TGATCA 1 cut(s) 283
BcnI CCSGG 1 cut(s) 981
BcoDI GTCTC 1 cut(s) 1333
BcuI ACTAGT 1 cut(s) 575
BfaI CTAG 5 cut(s) 576, 587, 734, 1142, 1229
BfuAI ACCTGC 2 cut(s) 85, 799
BisI GCNGC 4 cut(s) 31, 676, 1061, 1213
BlpI GCTNAGC 2 cut(s) 199, 951
BlsI GCNGC 4 cut(s) 32, 677, 1062, 1214
Bme1390I CCNGG 1 cut(s) 981
BmiI GGNNCC 2 cut(s) 6, 1404
BmrFI CCNGG 1 cut(s) 981
BmrI ACTGGG 1 cut(s) 1441
BmsI GCATC 2 cut(s) 458, 1234
BmuI ACTGGG 1 cut(s) 1441
BpiI GAAGAC 2 cut(s) 25, 1334
BplI GAGNNNNNCTC 4 cut(s) 234, 266, 260, 292
Bpu10I CCTNAGC 1 cut(s) 1254
Bpu1102I GCTNAGC 2 cut(s) 199, 951
Bpu14I TTCGAA 1 cut(s) 397
BpuEI CTTGAG 2 cut(s) 914, 1298
BpuMI CCSGG 1 cut(s) 981
BsaJI CCNNGG 2 cut(s) 111, 1163
BsaWI WCCGGW 2 cut(s) 517, 604
BsaXI ACNNNNNCTCC 2 cut(s) 752, 782
Bsc4I CCNNNNNNNGG 2 cut(s) 79, 219
Bse1I ACTGG 3 cut(s) 770, 792, 1436
Bse3DI GCAATG 2 cut(s) 40, 125
BseDI CCNNGG 2 cut(s) 111, 1163
BseGI GGATG 4 cut(s) 708, 900, 1132, 1404
BseLI CCNNNNNNNGG 2 cut(s) 79, 219
BseMI GCAATG 2 cut(s) 40, 125
BseMII CTCAG 5 cut(s) 213, 840, 965, 1245, 1336
BseNI ACTGG 3 cut(s) 770, 792, 1436
BseXI GCAGC 4 cut(s) 42, 662, 1047, 1199
Bsh1285I CGRYCG 1 cut(s) 522
BshFI GGCC 2 cut(s) 1007, 1364
BshNI GGYRCC 2 cut(s) 4, 1402
BsiEI CGRYCG 1 cut(s) 522
BsiSI CCGG 3 cut(s) 518, 605, 981
BslFI GGGAC 4 cut(s) 230, 287, 634, 1448
BslI CCNNNNNNNGG 2 cut(s) 79, 219
BsmAI GTCTC 1 cut(s) 1333
BsmFI GGGAC 4 cut(s) 230, 287, 634, 1448
BsmI GAATGC 3 cut(s) 492, 923, 981
BsnI GGCC 2 cut(s) 1007, 1364
Bsp119I TTCGAA 1 cut(s) 397
Bsp143I GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
Bsp1720I GCTNAGC 2 cut(s) 199, 951
Bsp19I CCATGG 2 cut(s) 111, 1163
BspACI CCGC 3 cut(s) 307, 904, 1352
BspANI GGCC 2 cut(s) 1007, 1364
BspCNI CTCAG 5 cut(s) 212, 841, 964, 1246, 1335
BspHI TCATGA 2 cut(s) 286, 1240
BspLI GGNNCC 2 cut(s) 6, 1404
BspMI ACCTGC 2 cut(s) 85, 799
BspPI GGATC 2 cut(s) 509, 1139
BspT104I TTCGAA 1 cut(s) 397
BspT107I GGYRCC 2 cut(s) 4, 1402
BsrDI GCAATG 2 cut(s) 40, 125
BsrI ACTGG 3 cut(s) 770, 792, 1436
BssECI CCNNGG 2 cut(s) 111, 1163
BssMI GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
BssT1I CCWWGG 2 cut(s) 111, 1163
Bst4CI ACNGT 3 cut(s) 229, 344, 1302
BstAPI GCANNNNNTGC 1 cut(s) 1409
BstBI TTCGAA 1 cut(s) 397
BstC8I GCNNGC 1 cut(s) 957
BstDEI CTNAG 6 cut(s) 199, 253, 849, 951, 1254, 1322
BstDSI CCRYGG 2 cut(s) 111, 1163
BstF5I GGATG 4 cut(s) 708, 900, 1132, 1404
BstHHI GCGC 1 cut(s) 565
BstKTI GATC 7 cut(s) 103, 286, 517, 619, 695, 777, 1147
BstMAI GTCTC 1 cut(s) 1333
BstMBI GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
BstMCI CGRYCG 1 cut(s) 522
BstMWI GCNNNNNNNGC 4 cut(s) 64, 730, 956, 1409
BstNSI RCATGY 4 cut(s) 596, 959, 990, 1412
BstSCI CCNGG 1 cut(s) 979
BstV1I GCAGC 4 cut(s) 42, 662, 1047, 1199
BstV2I GAAGAC 2 cut(s) 25, 1334
BstX2I RGATCY 1 cut(s) 1144
BstXI CCANNNNNNTGG 2 cut(s) 118, 1413
BstYI RGATCY 1 cut(s) 1144
BsuRI GGCC 2 cut(s) 1007, 1364
BtgI CCRYGG 2 cut(s) 111, 1163
BtsCI GGATG 4 cut(s) 708, 900, 1132, 1404
BtsIMutI CAGTG 1 cut(s) 1330
BveI ACCTGC 2 cut(s) 85, 799
Cac8I GCNNGC 1 cut(s) 957
CciI TCATGA 2 cut(s) 286, 1240
CfoI GCGC 1 cut(s) 565
CseI GACGC 2 cut(s) 460, 910
Csp6I GTAC 1 cut(s) 1337
CspCI CAANNNNNGTGG 2 cut(s) 169, 204
CviAII CATG 9 cut(s) 112, 287, 593, 956, 987, 1164, 1241, 1409, 1413
CviQI GTAC 1 cut(s) 1337
DdeI CTNAG 6 cut(s) 199, 253, 849, 951, 1254, 1322
DpnI GATC 7 cut(s) 102, 285, 516, 618, 694, 776, 1146
DpnII GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
DrdI GACNNNNNNGTC 1 cut(s) 302
DseDI GACNNNNNNGTC 1 cut(s) 302
EaeI YGGCCR 1 cut(s) 1362
Eco130I CCWWGG 2 cut(s) 111, 1163
Eco32I GATATC 2 cut(s) 487, 1234
Eco57I CTGAAG 2 cut(s) 861, 1440
EcoRV GATATC 2 cut(s) 487, 1234
EcoT14I CCWWGG 2 cut(s) 111, 1163
EcoT22I ATGCAT 1 cut(s) 1414
ErhI CCWWGG 2 cut(s) 111, 1163
FaeI CATG 9 cut(s) 115, 290, 596, 959, 990, 1167, 1244, 1412, 1416
FalI AAGNNNNNCTT 2 cut(s) 953, 985
FaqI GGGAC 4 cut(s) 230, 287, 634, 1448
FatI CATG 9 cut(s) 111, 286, 592, 955, 986, 1163, 1240, 1408, 1412
FbaI TGATCA 1 cut(s) 283
Fnu4HI GCNGC 4 cut(s) 31, 676, 1061, 1213
FokI GGATG 4 cut(s) 715, 887, 1139, 1411
Fsp4HI GCNGC 4 cut(s) 31, 676, 1061, 1213
FspBI CTAG 5 cut(s) 576, 587, 734, 1142, 1229
FspI TGCGCA 1 cut(s) 564
GlaI GCGC 1 cut(s) 564
GluI GCNGC 4 cut(s) 31, 676, 1061, 1213
HaeIII GGCC 2 cut(s) 1007, 1364
HapII CCGG 3 cut(s) 518, 605, 981
HgaI GACGC 2 cut(s) 460, 910
HhaI GCGC 1 cut(s) 565
Hin1II CATG 9 cut(s) 115, 290, 596, 959, 990, 1167, 1244, 1412, 1416
Hin6I GCGC 1 cut(s) 563
HinP1I GCGC 1 cut(s) 563
HinfI GANTC 9 cut(s) 171, 243, 275, 410, 583, 853, 860, 1309, 1385
HpaII CCGG 3 cut(s) 518, 605, 981
HphI GGTGA 4 cut(s) 98, 128, 305, 1287
Hpy166II GTNNAC 3 cut(s) 121, 157, 1419
Hpy188I TCNGA 6 cut(s) 170, 415, 582, 621, 880, 1459
Hpy8I GTNNAC 3 cut(s) 121, 157, 1419
Hpy99I CGWCG 1 cut(s) 637
HpyAV CCTTC 4 cut(s) 77, 149, 638, 723
HpyCH4III ACNGT 3 cut(s) 229, 344, 1302
HpyCH4IV ACGT 2 cut(s) 942, 1339
HpyF10VI GCNNNNNNNGC 4 cut(s) 64, 730, 956, 1409
HpyF3I CTNAG 6 cut(s) 199, 253, 849, 951, 1254, 1322
HpySE526I ACGT 2 cut(s) 942, 1339
Hsp92II CATG 9 cut(s) 115, 290, 596, 959, 990, 1167, 1244, 1412, 1416
HspAI GCGC 1 cut(s) 563
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
LmnI GCTCC 1 cut(s) 425
Lsp1109I GCAGC 4 cut(s) 42, 662, 1047, 1199
LweI GCATC 2 cut(s) 458, 1234
MaeI CTAG 5 cut(s) 576, 587, 734, 1142, 1229
MaeII ACGT 2 cut(s) 942, 1339
MaeIII GTNAC 1 cut(s) 293
MalI GATC 7 cut(s) 102, 285, 516, 618, 694, 776, 1146
MboI GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
MboII GAAGA 5 cut(s) 30, 973, 1145, 1187, 1334
MflI RGATCY 1 cut(s) 1144
MlsI TGGCCA 1 cut(s) 1364
MluCI AATT 6 cut(s) 416, 566, 787, 800, 1120, 1276
MluNI TGGCCA 1 cut(s) 1364
MlyI GAGTC 4 cut(s) 165, 252, 269, 1379
MmeI TCCRAC 3 cut(s) 193, 360, 1376
MnlI CCTC 7 cut(s) 144, 258, 262, 1166, 1170, 1249, 1453
Mox20I TGGCCA 1 cut(s) 1364
Mph1103I ATGCAT 1 cut(s) 1414
MroXI GAANNNNTTC 1 cut(s) 1137
MscI TGGCCA 1 cut(s) 1364
MseI TTAA 4 cut(s) 419, 798, 966, 1119
MslI CAYNNNNRTG 3 cut(s) 116, 291, 1411
Msp20I TGGCCA 1 cut(s) 1364
MspI CCGG 3 cut(s) 518, 605, 981
MspR9I CCNGG 1 cut(s) 981
Mva1269I GAATGC 3 cut(s) 492, 923, 981
MwoI GCNNNNNNNGC 4 cut(s) 64, 730, 956, 1409
NciI CCSGG 1 cut(s) 981
NcoI CCATGG 2 cut(s) 111, 1163
NdeII GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
NlaIII CATG 9 cut(s) 115, 290, 596, 959, 990, 1167, 1244, 1412, 1416
NlaIV GGNNCC 2 cut(s) 6, 1404
NmuCI GTSAC 1 cut(s) 293
NsbI TGCGCA 1 cut(s) 564
NsiI ATGCAT 1 cut(s) 1414
NspI RCATGY 4 cut(s) 596, 959, 990, 1412
NspV TTCGAA 1 cut(s) 397
PaeI GCATGC 1 cut(s) 959
PagI TCATGA 2 cut(s) 286, 1240
PciI ACATGT 1 cut(s) 986
PcsI WCGNNNNNNNCGW 1 cut(s) 737
PctI GAATGC 3 cut(s) 492, 923, 981
PdmI GAANNNNTTC 1 cut(s) 1137
PfeI GAWTC 5 cut(s) 410, 583, 853, 860, 1309
PflMI CCANNNNNTGG 1 cut(s) 219
PkrI GCNGC 4 cut(s) 32, 677, 1062, 1214
PleI GAGTC 4 cut(s) 165, 251, 269, 1379
PpsI GAGTC 4 cut(s) 165, 251, 269, 1379
PscI ACATGT 1 cut(s) 986
PshBI ATTAAT 1 cut(s) 419
Psp1406I AACGTT 1 cut(s) 942
PspN4I GGNNCC 2 cut(s) 6, 1404
PsuI RGATCY 1 cut(s) 1144
RsaI GTAC 1 cut(s) 1338
RsaNI GTAC 1 cut(s) 1337
RseI CAYNNNNRTG 3 cut(s) 116, 291, 1411
SaqAI TTAA 4 cut(s) 419, 798, 966, 1119
SatI GCNGC 4 cut(s) 31, 676, 1061, 1213
Sau3AI GATC 7 cut(s) 100, 283, 514, 616, 692, 774, 1144
SchI GAGTC 4 cut(s) 165, 252, 269, 1379
ScrFI CCNGG 1 cut(s) 981
SfaNI GCATC 2 cut(s) 458, 1234
SfuI TTCGAA 1 cut(s) 397
SmiMI CAYNNNNRTG 3 cut(s) 116, 291, 1411
SmlI CTYRAG 2 cut(s) 893, 1313
SmoI CTYRAG 2 cut(s) 893, 1313
SpeI ACTAGT 1 cut(s) 575
SphI GCATGC 1 cut(s) 959
Sse9I AATT 6 cut(s) 416, 566, 787, 800, 1120, 1276
SsiI CCGC 3 cut(s) 307, 904, 1352
SspMI CTAG 5 cut(s) 576, 587, 734, 1142, 1229
StyD4I CCNGG 1 cut(s) 979
StyI CCWWGG 2 cut(s) 111, 1163
TaaI ACNGT 3 cut(s) 229, 344, 1302
TaiI ACGT 2 cut(s) 945, 1342
TasI AATT 6 cut(s) 416, 566, 787, 800, 1120, 1276
TfiI GAWTC 5 cut(s) 410, 583, 853, 860, 1309
Tru1I TTAA 4 cut(s) 419, 798, 966, 1119
Tru9I TTAA 4 cut(s) 419, 798, 966, 1119
TscAI CASTG 1 cut(s) 1330
TseFI GTSAC 1 cut(s) 293
TseI GCWGC 4 cut(s) 30, 675, 1060, 1212
Tsp45I GTSAC 1 cut(s) 293
TspDTI ATGAA 3 cut(s) 313, 889, 1146
TspGWI ACGGA 3 cut(s) 621, 1226, 1397
TspRI CASTG 1 cut(s) 1330
Van91I CCANNNNNTGG 1 cut(s) 219
VspI ATTAAT 1 cut(s) 419
XapI RAATTY 3 cut(s) 787, 800, 1276
XbaI TCTAGA 2 cut(s) 586, 1141
XceI RCATGY 4 cut(s) 596, 959, 990, 1412
XmnI GAANNNNTTC 1 cut(s) 1137
XspI CTAG 5 cut(s) 576, 587, 734, 1142, 1229
Zsp2I ATGCAT 1 cut(s) 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.