Rorug03G0093800

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000082
Physical Location & Seq
Reverse (-)
7345507 .. 7348525
3019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0093800.1

Sequence Viewer

Length: 1689 bp
ATGGATAGTGGGATGGTAGCTGACCATTCTGTGGAACCTGCAACATGTGCTCTGTGCCACAGGGCTCTTTCACCCGAAAATGAGGCAATTGGAGATCTTGTAACTGCCAACATGTGTGGGGACTGTAAATTTTTGTACTTTGAAGATCTTGGCAGTCCCGTGTTCCCCACACGGGACTCTTATAGGATGAGGCCGTCTTGGAGAAGAAGAGCTAGGTACAGTAGTTCCGAGTCGGTTGACGATATTTTCTCACAACAGTTCTCACATATGATTAATCTGGTGCGGCAAAATCAGTCCCCTGGCTCTGGGCTTGAGGATCTACCTGTAGATGGTGATTCTGCTGCCAGGATATCACAGCGCACAAGTTCCCGTACTACACCAACTGGGTCTAGAAGATGGAGGCGGGGTCTCTCTGATACTGAGAGTGATGGTTTCGATAATGCGGATTCTCTCTATGGGGAGAGTGAATCAAATGTCAGTTTTGGGCGGTACAGGGTGTCTCATGATGTGAGTGATGTAGTTTCTTTTAGTGCCTATGGTGGTGATTCAGATGCTTCTGTAGACCTGCATGGTTTCCTGGATACAGAGACATTTATCCAACCAGATGATGGAAGTGCTTTTGATAGTGATACTGACATTGATCCAATGCTTGCTGGTCTCAACCCATGGAACTCAGACGACGCTGAAGAAGATGATGACGATGACGACGATGATGAGGAGGATGAAGAAGATGATGAATGGGAAGAAGTTGAGTCTGTGGAAAACATGGTTGAATCTGCAGAAGCCAATAGTCAACCGCGAAACCCTTTGATTTTGAGTTCTGGTAGAAGAAACCGCCCAGTCAATTGGCACCAACGAAGACAGATTACTGAAACTGAGGCTCCACTTCATTGGGGAATGAGGGGAAGGAATTCCCGTGATATCTTATCTAACTTCGATGATTCAGACATGATGCCTTATGTTACAAATTCTGGTGATTATCTTGATGCAGTAGGCTTTGAAGAATTGCTGGAGCATCTTGCTGAGGCAGACAGCTTAAGACGAGGAGCACCTCCTGCTGCTGTCTCGTTTTTGAATAATCTGCCTCTCATTCTTATTGGTAAGGAACATGAGAAGCATGATGACTTAGCCTGTGCAATTTGCAAGGATGTATTGACTATTGGCACTGAAGTGAATCAGCTTCCTTGCTTTCACTTGTATCACCCTTCCTGTATTCTGCCATGGTTGAGTACACGGAATTCTTGCCCTCTTTGTCGTTATGAGCTACCAACTGATGACAGAGACTACGAAGAGGGGAAGCGGAATGCTGGTGGTAGAGTGGACATCCACGTCCGGCGGAATGCTAGAGAGGACAGGTCTGCTGGTGTTTATAATAGAGCTGAAGAAGATGAAGATCATGCTTTTAGTGAAACTAGAGTGGAGCATAGGTTCCAAGTAGGTAGGGAACCTGACTCTAATACCTCCGGAGGAGAAAATAATCGGGGGAGTTGGTTTCTTCTTGCCGCTGCTCCAATTGTTAGTCTTGTGGGCATAGTTCTCGTGCTGTGGTTGGGAACTCCCCTAATGGAAAGAAGAGGTCTGGCAGGACAGGGCAACTTTGCTGATCAGGCCCGACGCCACGGTCATATTGCTGGTGCAGCACCCCACCACAGGCAGAATAGAAGCAGGAGGTGGTGGTCTCTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

562

Amino Acids

63.05

Weight (kDa)

4.65

Isoelectric Point (pI)

56.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 377 - 419 9.1e-11 Ring finger domain
zf-C3HC4_2 PF13923 378 - 418 5.2e-08 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 378 - 419 5.3e-06 RING-H2 zinc finger domain
zf-C3HC4 PF00097 378 - 418 6.4e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1371
AasI GACNNNNNNGTC 2 cut(s) 1328, 1620
Acc36I ACCTGC 2 cut(s) 46, 573
AccB1I GGYRCC 1 cut(s) 849
AccB7I CCANNNNNTGG 2 cut(s) 31, 608
AccI GTMKAC 1 cut(s) 561
AccII CGCG 1 cut(s) 799
AccIII TCCGGA 1 cut(s) 1463
AciI CCGC 9 cut(s) 283, 403, 443, 487, 797, 835, 1300, 1336, 1503
AclWI GGATC 2 cut(s) 324, 635
AcsI RAATTY 4 cut(s) 128, 910, 967, 1237
AcuI CTGAAG 3 cut(s) 705, 1188, 1401
AcyI GRCGYC 1 cut(s) 1615
AfaI GTAC 5 cut(s) 137, 218, 373, 491, 1231
AfiI CCNNNNNNNGG 6 cut(s) 31, 172, 305, 329, 608, 1650
AflII CTTAAG 1 cut(s) 1036
AflIII ACRYGT 2 cut(s) 44, 111
AgsI TTSAA 4 cut(s) 143, 773, 1001, 1075
AjiI CACGTC 1 cut(s) 1330
AjnI CCWGG 3 cut(s) 298, 344, 576
AleI CACNNNNGTG 1 cut(s) 1169
AloI GAACNNNNNNTCC 2 cut(s) 1412, 1444
AluBI AGCT 6 cut(s) 20, 212, 1035, 1180, 1264, 1379
AluI AGCT 6 cut(s) 20, 212, 1035, 1180, 1264, 1379
Alw21I GWGCWC 2 cut(s) 52, 1051
Alw26I GTCTC 7 cut(s) 413, 504, 581, 662, 1069, 1275, 1683
AlwI GGATC 2 cut(s) 324, 635
Aor13HI TCCGGA 1 cut(s) 1463
AoxI GGCC 2 cut(s) 191, 1608
ApeKI GCWGC 4 cut(s) 341, 1058, 1505, 1637
ApoI RAATTY 4 cut(s) 128, 910, 967, 1237
AseI ATTAAT 1 cut(s) 273
Asp700I GAANNNNTTC 1 cut(s) 910
AspLEI GCGC 1 cut(s) 360
AspS9I GGNCC 1 cut(s) 1609
AsuHPI GGTGA 5 cut(s) 63, 344, 554, 986, 1193
BaeI ACNNNNGTAYC 2 cut(s) 208, 241
BanI GGYRCC 1 cut(s) 849
BanII GRGCYC 1 cut(s) 67
BarI GAAGNNNNNNTAC 2 cut(s) 850, 882
BauI CACGAG 1 cut(s) 1538
BbsI GAAGAC 1 cut(s) 865
Bbv12I GWGCWC 2 cut(s) 52, 1051
BbvCI CCTCAGC 1 cut(s) 1023
BbvI GCAGC 4 cut(s) 328, 1045, 1492, 1649
BccI CCATC 5 cut(s) 7, 323, 390, 422, 602
BceAI ACGGC 1 cut(s) 178
BcgI CGANNNNNNTGC 2 cut(s) 1519, 1553
BciT130I CCWGG 3 cut(s) 300, 346, 578
BciVI GTATCC 1 cut(s) 574
BclI TGATCA 1 cut(s) 1603
BcoDI GTCTC 7 cut(s) 413, 504, 581, 662, 1069, 1275, 1683
BfaI CTAG 4 cut(s) 213, 390, 1344, 1413
BfmI CTRYAG 3 cut(s) 324, 558, 777
BfrI CTTAAG 1 cut(s) 1036
BfuAI ACCTGC 2 cut(s) 46, 573
BfuI GTATCC 1 cut(s) 574
BglII AGATCT 2 cut(s) 94, 145
BisI GCNGC 6 cut(s) 284, 342, 1059, 1503, 1506, 1638
BlsI GCNGC 6 cut(s) 285, 343, 1060, 1504, 1507, 1639
Bme1390I CCNGG 3 cut(s) 300, 346, 578
BmgBI CACGTC 1 cut(s) 1330
BmgT120I GGNCC 1 cut(s) 1609
BmiI GGNNCC 5 cut(s) 36, 851, 882, 1430, 1446
BmrFI CCNGG 3 cut(s) 300, 346, 578
BmrI ACTGGG 2 cut(s) 393, 833
BmsI GCATC 4 cut(s) 541, 942, 976, 1024
BmuI ACTGGG 2 cut(s) 393, 833
BpiI GAAGAC 1 cut(s) 865
BpmI CTGGAG 1 cut(s) 1031
Bpu10I CCTNAGC 1 cut(s) 1023
BpuEI CTTGAG 1 cut(s) 332
BsaBI GATNNNNATC 1 cut(s) 1392
BsaHI GRCGYC 1 cut(s) 1615
BsaI GGTCTC 3 cut(s) 413, 662, 1683
BsaJI CCNNGG 4 cut(s) 298, 665, 1220, 1618
BsaWI WCCGGW 1 cut(s) 1463
BsaXI ACNNNNNCTCC 8 cut(s) 84, 114, 391, 421, 865, 895, 1412, 1442
Bsc4I CCNNNNNNNGG 6 cut(s) 31, 172, 305, 329, 608, 1650
Bse1I ACTGG 2 cut(s) 388, 839
Bse8I GATNNNNATC 1 cut(s) 1392
BseAI TCCGGA 1 cut(s) 1463
BseBI CCWGG 3 cut(s) 300, 346, 578
BseDI CCNNGG 4 cut(s) 298, 665, 1220, 1618
BseGI GGATG 5 cut(s) 18, 192, 727, 1153, 1323
BseJI GATNNNNATC 1 cut(s) 1392
BseLI CCNNNNNNNGG 6 cut(s) 31, 172, 305, 329, 608, 1650
BseMII CTCAG 4 cut(s) 411, 687, 867, 1014
BseNI ACTGG 2 cut(s) 388, 839
BseRI GAGGAG 3 cut(s) 731, 1059, 1482
BseXI GCAGC 4 cut(s) 328, 1045, 1492, 1649
BsgI GTGCAG 1 cut(s) 1656
Bsh1236I CGCG 1 cut(s) 799
BshFI GGCC 2 cut(s) 193, 1610
BshNI GGYRCC 1 cut(s) 849
BsiHKAI GWGCWC 2 cut(s) 52, 1051
BsiSI CCGG 2 cut(s) 1333, 1464
BslFI GGGAC 4 cut(s) 134, 141, 188, 280
BslI CCNNNNNNNGG 6 cut(s) 31, 172, 305, 329, 608, 1650
BsmAI GTCTC 7 cut(s) 413, 504, 581, 662, 1069, 1275, 1683
BsmFI GGGAC 4 cut(s) 134, 141, 188, 280
BsmI GAATGC 2 cut(s) 1309, 1345
BsnI GGCC 2 cut(s) 193, 1610
Bso31I GGTCTC 3 cut(s) 413, 662, 1683
Bsp1286I GDGCHC 3 cut(s) 52, 67, 1051
Bsp13I TCCGGA 1 cut(s) 1463
Bsp143I GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
Bsp19I CCATGG 2 cut(s) 665, 1220
BspACI CCGC 9 cut(s) 283, 403, 443, 487, 797, 835, 1300, 1336, 1503
BspANI GGCC 2 cut(s) 193, 1610
BspCNI CTCAG 4 cut(s) 412, 686, 868, 1015
BspEI TCCGGA 1 cut(s) 1463
BspFNI CGCG 1 cut(s) 799
BspHI TCATGA 1 cut(s) 502
BspLI GGNNCC 5 cut(s) 36, 851, 882, 1430, 1446
BspMAI CTGCAG 1 cut(s) 781
BspMI ACCTGC 2 cut(s) 46, 573
BspPI GGATC 2 cut(s) 324, 635
BspQI GCTCTTC 1 cut(s) 202
BspT107I GGYRCC 1 cut(s) 849
BspTI CTTAAG 1 cut(s) 1036
BspTNI GGTCTC 3 cut(s) 413, 662, 1683
BsrI ACTGG 2 cut(s) 388, 839
BssECI CCNNGG 4 cut(s) 298, 665, 1220, 1618
BssMI GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
BssNI GRCGYC 1 cut(s) 1615
BssSI CACGAG 1 cut(s) 1538
BssT1I CCWWGG 2 cut(s) 665, 1220
Bst2BI CACGAG 1 cut(s) 1538
Bst2UI CCWGG 3 cut(s) 300, 346, 578
Bst4CI ACNGT 4 cut(s) 125, 221, 258, 1622
Bst6I CTCTTC 3 cut(s) 202, 1284, 1567
BstACI GRCGYC 1 cut(s) 1615
BstAFI CTTAAG 1 cut(s) 1036
BstAPI GCANNNNNTGC 2 cut(s) 47, 1055
BstC8I GCNNGC 1 cut(s) 651
BstDEI CTNAG 5 cut(s) 420, 673, 876, 1023, 1126
BstDSI CCRYGG 3 cut(s) 665, 1220, 1618
BstF5I GGATG 5 cut(s) 18, 192, 727, 1153, 1323
BstFNI CGCG 1 cut(s) 799
BstHHI GCGC 1 cut(s) 360
BstKTI GATC 6 cut(s) 97, 148, 319, 643, 1396, 1606
BstMAI GTCTC 7 cut(s) 413, 504, 581, 662, 1069, 1275, 1683
BstMBI GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
BstMWI GCNNNNNNNGC 4 cut(s) 47, 1055, 1607, 1637
BstNI CCWGG 3 cut(s) 300, 346, 578
BstNSI RCATGY 2 cut(s) 48, 115
BstSCI CCNGG 3 cut(s) 298, 344, 576
BstSFI CTRYAG 3 cut(s) 324, 558, 777
BstUI CGCG 1 cut(s) 799
BstV1I GCAGC 4 cut(s) 328, 1045, 1492, 1649
BstV2I GAAGAC 1 cut(s) 865
BstX2I RGATCY 3 cut(s) 94, 145, 316
BstXI CCANNNNNNTGG 2 cut(s) 846, 891
BstYI RGATCY 3 cut(s) 94, 145, 316
BsuI GTATCC 1 cut(s) 574
BsuRI GGCC 2 cut(s) 193, 1610
BtgI CCRYGG 3 cut(s) 665, 1220, 1618
BtrI CACGTC 1 cut(s) 1330
BtsCI GGATG 5 cut(s) 18, 192, 727, 1153, 1323
BtsIMutI CAGTG 1 cut(s) 1164
BveI ACCTGC 2 cut(s) 46, 573
Cac8I GCNNGC 1 cut(s) 651
CciI TCATGA 1 cut(s) 502
CfoI GCGC 1 cut(s) 360
Cfr13I GGNCC 1 cut(s) 1609
CseI GACGC 2 cut(s) 689, 1623
Csp6I GTAC 5 cut(s) 136, 217, 372, 490, 1230
CspCI CAANNNNNGTGG 2 cut(s) 97, 132
CviQI GTAC 5 cut(s) 136, 217, 372, 490, 1230
DdeI CTNAG 5 cut(s) 420, 673, 876, 1023, 1126
DpnI GATC 6 cut(s) 96, 147, 318, 642, 1395, 1605
DpnII GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
DrdI GACNNNNNNGTC 2 cut(s) 1328, 1620
DseDI GACNNNNNNGTC 2 cut(s) 1328, 1620
Eam1104I CTCTTC 3 cut(s) 202, 1284, 1567
EarI CTCTTC 3 cut(s) 202, 1284, 1567
EciI GGCGGA 1 cut(s) 1351
Eco130I CCWWGG 2 cut(s) 665, 1220
Eco24I GRGCYC 1 cut(s) 67
Eco31I GGTCTC 3 cut(s) 413, 662, 1683
Eco32I GATATC 2 cut(s) 351, 922
Eco57I CTGAAG 3 cut(s) 705, 1188, 1401
EcoRI GAATTC 2 cut(s) 910, 1237
EcoRII CCWGG 3 cut(s) 298, 344, 576
EcoRV GATATC 2 cut(s) 351, 922
EcoT14I CCWWGG 2 cut(s) 665, 1220
EcoT38I GRGCYC 1 cut(s) 67
ErhI CCWWGG 2 cut(s) 665, 1220
FaqI GGGAC 4 cut(s) 134, 141, 188, 280
FauI CCCGC 1 cut(s) 396
FauNDI CATATG 1 cut(s) 267
FbaI TGATCA 1 cut(s) 1603
FblI GTMKAC 1 cut(s) 561
Fnu4HI GCNGC 6 cut(s) 284, 342, 1059, 1503, 1506, 1638
FokI GGATG 5 cut(s) 25, 199, 734, 1160, 1310
FriOI GRGCYC 1 cut(s) 67
Fsp4HI GCNGC 6 cut(s) 284, 342, 1059, 1503, 1506, 1638
FspBI CTAG 4 cut(s) 213, 390, 1344, 1413
GlaI GCGC 1 cut(s) 359
GluI GCNGC 6 cut(s) 284, 342, 1059, 1503, 1506, 1638
GsuI CTGGAG 1 cut(s) 1031
HaeIII GGCC 2 cut(s) 193, 1610
HapII CCGG 2 cut(s) 1333, 1464
HgaI GACGC 2 cut(s) 689, 1623
HhaI GCGC 1 cut(s) 360
Hin1I GRCGYC 1 cut(s) 1615
Hin6I GCGC 1 cut(s) 358
HinP1I GCGC 1 cut(s) 358
HincII GTYRAC 2 cut(s) 238, 794
HindII GTYRAC 2 cut(s) 238, 794
HpaII CCGG 2 cut(s) 1333, 1464
HphI GGTGA 5 cut(s) 63, 344, 554, 986, 1193
Hpy166II GTNNAC 5 cut(s) 238, 562, 794, 1232, 1321
Hpy188I TCNGA 6 cut(s) 229, 415, 550, 676, 946, 1688
Hpy188III TCNNGA 4 cut(s) 390, 503, 983, 1464
Hpy8I GTNNAC 5 cut(s) 238, 562, 794, 1232, 1321
Hpy99I CGWCG 3 cut(s) 683, 710, 1617
HpyAV CCTTC 2 cut(s) 900, 1215
HpyCH4III ACNGT 4 cut(s) 125, 221, 258, 1622
HpyCH4IV ACGT 1 cut(s) 1329
HpyCH4V TGCA 7 cut(s) 41, 568, 779, 989, 1136, 1143, 1637
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 1055, 1607, 1637
HpyF3I CTNAG 5 cut(s) 420, 673, 876, 1023, 1126
HpySE526I ACGT 1 cut(s) 1329
Hsp92I GRCGYC 1 cut(s) 1615
HspAI GCGC 1 cut(s) 358
Kpn2I TCCGGA 1 cut(s) 1463
Ksp22I TGATCA 1 cut(s) 1603
Kzo9I GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
LguI GCTCTTC 1 cut(s) 202
LmnI GCTCC 5 cut(s) 886, 1012, 1046, 1420, 1513
Lsp1109I GCAGC 4 cut(s) 328, 1045, 1492, 1649
LweI GCATC 4 cut(s) 541, 942, 976, 1024
MaeI CTAG 4 cut(s) 213, 390, 1344, 1413
MaeII ACGT 1 cut(s) 1329
MaeIII GTNAC 2 cut(s) 100, 961
MalI GATC 6 cut(s) 96, 147, 318, 642, 1395, 1605
MboI GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
MfeI CAATTG 3 cut(s) 87, 844, 1512
MflI RGATCY 3 cut(s) 94, 145, 316
MhlI GDGCHC 3 cut(s) 52, 67, 1051
MluCI AATT 9 cut(s) 87, 128, 844, 910, 967, 1004, 1137, 1237, 1512
MlyI GAGTC 4 cut(s) 170, 239, 761, 1445
MmeI TCCRAC 1 cut(s) 622
MroI TCCGGA 1 cut(s) 1463
MroXI GAANNNNTTC 1 cut(s) 910
MseI TTAA 2 cut(s) 273, 1037
MslI CAYNNNNRTG 1 cut(s) 1169
MspA1I CMGCKG 1 cut(s) 1505
MspCI CTTAAG 1 cut(s) 1036
MspI CCGG 2 cut(s) 1333, 1464
MspR9I CCNGG 3 cut(s) 300, 346, 578
MunI CAATTG 3 cut(s) 87, 844, 1512
Mva1269I GAATGC 2 cut(s) 1309, 1345
MvaI CCWGG 3 cut(s) 300, 346, 578
MvnI CGCG 1 cut(s) 799
MwoI GCNNNNNNNGC 4 cut(s) 47, 1055, 1607, 1637
NcoI CCATGG 2 cut(s) 665, 1220
NdeI CATATG 1 cut(s) 267
NdeII GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
NlaIV GGNNCC 5 cut(s) 36, 851, 882, 1430, 1446
NspI RCATGY 2 cut(s) 48, 115
OliI CACNNNNGTG 1 cut(s) 1169
PagI TCATGA 1 cut(s) 502
PciI ACATGT 2 cut(s) 44, 111
PciSI GCTCTTC 1 cut(s) 202
PcsI WCGNNNNNNNCGW 1 cut(s) 705
PctI GAATGC 2 cut(s) 1309, 1345
PdmI GAANNNNTTC 1 cut(s) 910
PfeI GAWTC 7 cut(s) 335, 446, 467, 545, 773, 941, 1174
PflMI CCANNNNNTGG 2 cut(s) 31, 608
PfoI TCCNGGA 1 cut(s) 576
PkrI GCNGC 6 cut(s) 285, 343, 1060, 1504, 1507, 1639
PleI GAGTC 4 cut(s) 170, 238, 760, 1445
PpsI GAGTC 4 cut(s) 170, 238, 760, 1445
PscI ACATGT 2 cut(s) 44, 111
PshBI ATTAAT 1 cut(s) 273
PsiI TTATAA 1 cut(s) 1371
Psp6I CCWGG 3 cut(s) 298, 344, 576
PspGI CCWGG 3 cut(s) 298, 344, 576
PspN4I GGNNCC 5 cut(s) 36, 851, 882, 1430, 1446
PspPI GGNCC 1 cut(s) 1609
PstI CTGCAG 1 cut(s) 781
PsuI RGATCY 3 cut(s) 94, 145, 316
RsaI GTAC 5 cut(s) 137, 218, 373, 491, 1231
RsaNI GTAC 5 cut(s) 136, 217, 372, 490, 1230
RseI CAYNNNNRTG 1 cut(s) 1169
SapI GCTCTTC 1 cut(s) 202
SaqAI TTAA 2 cut(s) 273, 1037
SatI GCNGC 6 cut(s) 284, 342, 1059, 1503, 1506, 1638
Sau3AI GATC 6 cut(s) 94, 145, 316, 640, 1393, 1603
Sau96I GGNCC 1 cut(s) 1609
SchI GAGTC 4 cut(s) 170, 239, 761, 1445
ScrFI CCNGG 3 cut(s) 300, 346, 578
SduI GDGCHC 3 cut(s) 52, 67, 1051
SfaNI GCATC 4 cut(s) 541, 942, 976, 1024
SfcI CTRYAG 3 cut(s) 324, 558, 777
SmiMI CAYNNNNRTG 1 cut(s) 1169
SmlI CTYRAG 2 cut(s) 311, 1036
SmoI CTYRAG 2 cut(s) 311, 1036
Sse9I AATT 9 cut(s) 87, 128, 844, 910, 967, 1004, 1137, 1237, 1512
SsiI CCGC 9 cut(s) 283, 403, 443, 487, 797, 835, 1300, 1336, 1503
SspMI CTAG 4 cut(s) 213, 390, 1344, 1413
StyD4I CCNGG 3 cut(s) 298, 344, 576
StyI CCWWGG 2 cut(s) 665, 1220
TaaI ACNGT 4 cut(s) 125, 221, 258, 1622
TaiI ACGT 1 cut(s) 1332
TaqI TCGA 2 cut(s) 435, 936
TasI AATT 9 cut(s) 87, 128, 844, 910, 967, 1004, 1137, 1237, 1512
TatI WGTACW 2 cut(s) 135, 1229
TauI GCSGC 2 cut(s) 286, 1505
TfiI GAWTC 7 cut(s) 335, 446, 467, 545, 773, 941, 1174
Tru1I TTAA 2 cut(s) 273, 1037
Tru9I TTAA 2 cut(s) 273, 1037
TscAI CASTG 1 cut(s) 1171
TseI GCWGC 4 cut(s) 341, 1058, 1505, 1637
TspDTI ATGAA 4 cut(s) 738, 750, 878, 1404
TspGWI ACGGA 1 cut(s) 1249
TspRI CASTG 1 cut(s) 1171
Van91I CCANNNNNTGG 2 cut(s) 31, 608
Vha464I CTTAAG 1 cut(s) 1036
VspI ATTAAT 1 cut(s) 273
XapI RAATTY 4 cut(s) 128, 910, 967, 1237
XbaI TCTAGA 1 cut(s) 389
XceI RCATGY 2 cut(s) 48, 115
XcmI CCANNNNNNNNNTGG 1 cut(s) 605
XmiI GTMKAC 1 cut(s) 561
XmnI GAANNNNTTC 1 cut(s) 910
XspI CTAG 4 cut(s) 213, 390, 1344, 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.