RchiOBHm_Chr2g0101031

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
12798972 .. 12801082
2111 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47565

Sequence Viewer

Length: 1083 bp
ATGGCGGATTACTTACCTGAAGACTTGATAGTTCGGATCCTGGAGAGGTTGCAGATCAAATCCCTAATCCGCTTCACCTGCGTTTCGAAACGCTGGCGTTCCATCATATTGGCCGACCCAGAATTCGCCAAGACCCAATTCCAAATAGCCTCTCAACACCAAACCCTCCGTCACAGGCTCCTCTTCTCCACCGCCTGTGAATCTGAATTCAACTCACTAGACTTGGATGCGCCGTCGCCGTTGGGATACAATTCTTCGGTTAGGTGCCCATTCACGCAACCGGGGGGCCGTTATGTCATACCACTGTGCTCCTGCAATGGTTTGATACTCGCAACTCTTCATAAAGAAGAACACATTTATATCTGGAACCCATCAACTCAATTCTTCAAAAAATTACCTGACCCAGCTGATCGTCCCTCAAAAACTCGTCTATTCGGCTGTGGTTTTGGCTATTTGTCGGCCACTGACGACTACAGAGTTGTTGCTGACTTCAGAGTCAGTTCTGTTGATGAGGTGAAGGGCAAGGAGATGCACATCTTCTCATCAAGAGCCAACATTTGGAAAAGGACTGAAGCCCCTCTCTTCGACTACAAGTTTGAATATGAGGGGACTCTTTCGAATGAGGCACTCCATTGGCTGGATGAACTTGGCATCTTTGCTTTTGATCTAGCAAAGGAGGAGTTCCAAAGAATGCCGCTGCCTATTCTAGATGGTGAGGTTAAGCATCTCGGGGCTTTCGGAGACTGTCTGTGTGCATTTGATTGTGCAGAATTTTATACTGCTGGCTCCATTGATTTGTGGGTGATGAAAAAATATGGCGTGGCTGACTCATGGACCAAGCTCTTTAACTTAGAGGTTTCCGATCAGCCTCAGAATATAATGTATTTTTTGCCACTCTCTGTAATGGAAACTAGTACAGTTATGCACACAGCGACTATACTCGGGAAACAGAAGTTTCTTAATTTGATAAGGATTGGTCATACGAAACAGAAGCCCGGAATGCATCTGTTGAGCAGGAATACATATCTCATGGAAATGATTGCATATGAAGAGACTCTACTTGGCTTGCTGCCCCTTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

360

Amino Acids

41.26

Weight (kDa)

6.22

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 3 - 39 1e-07 F-box-like
F-box PF00646 5 - 37 9.6e-10 F-box domain
FBA_3 PF08268 61 - 280 1.1e-09 F-box associated beta propeller domain
FBA_1 PF07734 102 - 296 1e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 86
AasI GACNNNNNNGTC 1 cut(s) 494
Acc36I ACCTGC 1 cut(s) 86
AccB1I GGYRCC 1 cut(s) 264
AccB7I CCANNNNNTGG 2 cut(s) 558, 637
AciI CCGC 4 cut(s) 5, 70, 192, 695
AclWI GGATC 2 cut(s) 31, 44
AcoI YGGCCR 2 cut(s) 111, 459
AcsI RAATTY 3 cut(s) 122, 206, 770
AcuI CTGAAG 3 cut(s) 39, 475, 591
AfaI GTAC 1 cut(s) 916
AfiI CCNNNNNNNGG 2 cut(s) 558, 637
AgsI TTSAA 3 cut(s) 211, 388, 599
AhlI ACTAGT 1 cut(s) 911
AjnI CCWGG 1 cut(s) 39
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AluBI AGCT 2 cut(s) 407, 841
AluI AGCT 2 cut(s) 407, 841
Alw21I GWGCWC 1 cut(s) 311
Alw26I GTCTC 2 cut(s) 735, 1046
AlwI GGATC 2 cut(s) 31, 44
Ama87I CYCGRG 2 cut(s) 728, 941
AoxI GGCC 3 cut(s) 111, 286, 459
ApeKI GCWGC 2 cut(s) 697, 1069
ApoI RAATTY 3 cut(s) 122, 206, 770
ArsI GACNNNNNNTTYG 6 cut(s) 107, 139, 154, 186, 578, 610
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 2 cut(s) 286, 834
AsuC2I CCSGG 2 cut(s) 282, 996
AsuHPI GGTGA 4 cut(s) 67, 526, 725, 814
AsuII TTCGAA 2 cut(s) 86, 617
AvaI CYCGRG 2 cut(s) 728, 941
AvaII GGWCC 1 cut(s) 834
BaeGI GKGCMC 1 cut(s) 269
BamHI GGATCC 1 cut(s) 36
BanI GGYRCC 1 cut(s) 264
BarI GAAGNNNNNNTAC 2 cut(s) 1041, 1073
BbsI GAAGAC 1 cut(s) 27
Bbv12I GWGCWC 1 cut(s) 311
BbvI GCAGC 2 cut(s) 684, 1056
BccI CCATC 3 cut(s) 110, 379, 704
BceAI ACGGC 3 cut(s) 217, 223, 273
BciT130I CCWGG 1 cut(s) 41
BciVI GTATCC 1 cut(s) 239
BcnI CCSGG 2 cut(s) 282, 996
BcoDI GTCTC 2 cut(s) 735, 1046
BcuI ACTAGT 1 cut(s) 911
BfaI CTAG 4 cut(s) 218, 668, 707, 912
BfmI CTRYAG 1 cut(s) 472
BfuAI ACCTGC 1 cut(s) 86
BfuI GTATCC 1 cut(s) 239
BisI GCNGC 3 cut(s) 695, 698, 1070
BlsI GCNGC 3 cut(s) 696, 699, 1071
Bme1390I CCNGG 3 cut(s) 41, 282, 996
Bme18I GGWCC 1 cut(s) 834
BmeT110I CYCGRG 2 cut(s) 728, 941
BmgT120I GGNCC 2 cut(s) 286, 834
BmiI GGNNCC 6 cut(s) 38, 179, 266, 287, 368, 787
BmrFI CCNGG 3 cut(s) 41, 282, 996
BmsI GCATC 5 cut(s) 217, 519, 660, 733, 1012
BpiI GAAGAC 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 62
Bpu14I TTCGAA 2 cut(s) 86, 617
BpuMI CCSGG 2 cut(s) 282, 996
BsaBI GATNNNNATC 1 cut(s) 533
BsaJI CCNNGG 1 cut(s) 281
Bsc4I CCNNNNNNNGG 2 cut(s) 558, 637
Bse3DI GCAATG 1 cut(s) 322
Bse8I GATNNNNATC 1 cut(s) 533
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 1 cut(s) 281
BseGI GGATG 2 cut(s) 232, 646
BseJI GATNNNNATC 1 cut(s) 533
BseLI CCNNNNNNNGG 2 cut(s) 558, 637
BseMI GCAATG 1 cut(s) 322
BseMII CTCAG 1 cut(s) 884
BseRI GAGGAG 2 cut(s) 170, 692
BseSI GKGCMC 1 cut(s) 269
BseXI GCAGC 2 cut(s) 684, 1056
BseYI CCCAGC 1 cut(s) 403
BsgI GTGCAG 1 cut(s) 786
BshFI GGCC 3 cut(s) 113, 288, 461
BshNI GGYRCC 1 cut(s) 264
BsiHKAI GWGCWC 1 cut(s) 311
BsiHKCI CYCGRG 2 cut(s) 728, 941
BsiSI CCGG 2 cut(s) 281, 996
BslFI GGGAC 2 cut(s) 399, 622
BslI CCNNNNNNNGG 2 cut(s) 558, 637
BsmAI GTCTC 2 cut(s) 735, 1046
BsmFI GGGAC 2 cut(s) 399, 622
BsmI GAATGC 2 cut(s) 696, 1005
BsnI GGCC 3 cut(s) 113, 288, 461
BsoBI CYCGRG 2 cut(s) 728, 941
Bsp119I TTCGAA 2 cut(s) 86, 617
Bsp1286I GDGCHC 2 cut(s) 269, 311
Bsp143I GATC 5 cut(s) 36, 54, 409, 664, 862
BspACI CCGC 4 cut(s) 5, 70, 192, 695
BspANI GGCC 3 cut(s) 113, 288, 461
BspCNI CTCAG 1 cut(s) 883
BspLI GGNNCC 6 cut(s) 38, 179, 266, 287, 368, 787
BspMI ACCTGC 1 cut(s) 86
BspPI GGATC 2 cut(s) 31, 44
BspT104I TTCGAA 2 cut(s) 86, 617
BspT107I GGYRCC 1 cut(s) 264
BsrDI GCAATG 1 cut(s) 322
BssECI CCNNGG 1 cut(s) 281
BssMI GATC 5 cut(s) 36, 54, 409, 664, 862
Bst2UI CCWGG 1 cut(s) 41
Bst4CI ACNGT 3 cut(s) 306, 746, 919
Bst6I CTCTTC 4 cut(s) 188, 342, 587, 1044
BstBI TTCGAA 2 cut(s) 86, 617
BstC8I GCNNGC 3 cut(s) 95, 784, 1067
BstDEI CTNAG 2 cut(s) 850, 870
BstF5I GGATG 2 cut(s) 232, 646
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 5 cut(s) 39, 57, 412, 667, 865
BstMAI GTCTC 2 cut(s) 735, 1046
BstMBI GATC 5 cut(s) 36, 54, 409, 664, 862
BstMWI GCNNNNNNNGC 2 cut(s) 78, 1000
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 3 cut(s) 39, 280, 994
BstSFI CTRYAG 1 cut(s) 472
BstSLI GKGCMC 1 cut(s) 269
BstV1I GCAGC 2 cut(s) 684, 1056
BstV2I GAAGAC 1 cut(s) 27
BstX2I RGATCY 1 cut(s) 36
BstXI CCANNNNNNTGG 1 cut(s) 109
BstYI RGATCY 1 cut(s) 36
BsuI GTATCC 1 cut(s) 239
BsuRI GGCC 3 cut(s) 113, 288, 461
BtsCI GGATG 2 cut(s) 232, 646
BtsIMutI CAGTG 2 cut(s) 302, 462
BveI ACCTGC 1 cut(s) 86
Cac8I GCNNGC 3 cut(s) 95, 784, 1067
CfoI GCGC 1 cut(s) 232
Cfr13I GGNCC 2 cut(s) 286, 834
Csp6I GTAC 1 cut(s) 915
CviAII CATG 2 cut(s) 831, 1030
CviQI GTAC 1 cut(s) 915
DdeI CTNAG 2 cut(s) 850, 870
DpnI GATC 5 cut(s) 38, 56, 411, 666, 864
DpnII GATC 5 cut(s) 36, 54, 409, 664, 862
DrdI GACNNNNNNGTC 1 cut(s) 494
DseDI GACNNNNNNGTC 1 cut(s) 494
EaeI YGGCCR 2 cut(s) 111, 459
Eam1104I CTCTTC 4 cut(s) 188, 342, 587, 1044
EarI CTCTTC 4 cut(s) 188, 342, 587, 1044
EciI GGCGGA 1 cut(s) 20
Eco47I GGWCC 1 cut(s) 834
Eco57I CTGAAG 3 cut(s) 39, 475, 591
Eco88I CYCGRG 2 cut(s) 728, 941
EcoRI GAATTC 2 cut(s) 122, 206
EcoRII CCWGG 1 cut(s) 39
EcoT22I ATGCAT 1 cut(s) 1005
FaeI CATG 2 cut(s) 834, 1033
FaqI GGGAC 2 cut(s) 399, 622
FatI CATG 2 cut(s) 830, 1029
FauNDI CATATG 1 cut(s) 1045
Fnu4HI GCNGC 3 cut(s) 695, 698, 1070
FokI GGATG 2 cut(s) 239, 653
Fsp4HI GCNGC 3 cut(s) 695, 698, 1070
FspBI CTAG 4 cut(s) 218, 668, 707, 912
GlaI GCGC 1 cut(s) 231
GluI GCNGC 3 cut(s) 695, 698, 1070
GsaI CCCAGC 1 cut(s) 407
GsuI CTGGAG 1 cut(s) 62
HaeIII GGCC 3 cut(s) 113, 288, 461
HapII CCGG 2 cut(s) 281, 996
HhaI GCGC 1 cut(s) 232
Hin1II CATG 2 cut(s) 834, 1033
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HinfI GANTC 5 cut(s) 200, 495, 610, 827, 1054
HpaII CCGG 2 cut(s) 281, 996
HphI GGTGA 4 cut(s) 67, 526, 725, 814
Hpy188I TCNGA 6 cut(s) 36, 205, 494, 740, 862, 873
Hpy188III TCNNGA 4 cut(s) 364, 546, 707, 943
Hpy99I CGWCG 1 cut(s) 238
HpyAV CCTTC 1 cut(s) 511
HpyCH4III ACNGT 3 cut(s) 306, 746, 919
HpyCH4V TGCA 8 cut(s) 52, 315, 532, 755, 767, 925, 1003, 1043
HpyF10VI GCNNNNNNNGC 2 cut(s) 78, 1000
HpyF3I CTNAG 2 cut(s) 850, 870
Hsp92II CATG 2 cut(s) 834, 1033
HspAI GCGC 1 cut(s) 230
Kzo9I GATC 5 cut(s) 36, 54, 409, 664, 862
LmnI GCTCC 3 cut(s) 183, 314, 791
Lsp1109I GCAGC 2 cut(s) 684, 1056
LweI GCATC 5 cut(s) 217, 519, 660, 733, 1012
MaeI CTAG 4 cut(s) 218, 668, 707, 912
MaeIII GTNAC 1 cut(s) 170
MalI GATC 5 cut(s) 38, 56, 411, 666, 864
MboI GATC 5 cut(s) 36, 54, 409, 664, 862
MboII GAAGA 9 cut(s) 32, 175, 246, 329, 359, 376, 529, 574, 1061
MflI RGATCY 1 cut(s) 36
MhlI GDGCHC 2 cut(s) 269, 311
MluCI AATT 8 cut(s) 122, 137, 206, 250, 380, 392, 770, 961
MlyI GAGTC 4 cut(s) 504, 604, 821, 1048
Mph1103I ATGCAT 1 cut(s) 1005
MseI TTAA 4 cut(s) 720, 846, 960, 1077
MslI CAYNNNNRTG 1 cut(s) 1034
MspA1I CMGCKG 2 cut(s) 407, 697
MspI CCGG 2 cut(s) 281, 996
MspR9I CCNGG 3 cut(s) 41, 282, 996
Mva1269I GAATGC 2 cut(s) 696, 1005
MvaI CCWGG 1 cut(s) 41
MwoI GCNNNNNNNGC 2 cut(s) 78, 1000
NciI CCSGG 2 cut(s) 282, 996
NdeI CATATG 1 cut(s) 1045
NdeII GATC 5 cut(s) 36, 54, 409, 664, 862
NlaIII CATG 2 cut(s) 834, 1033
NlaIV GGNNCC 6 cut(s) 38, 179, 266, 287, 368, 787
NmuCI GTSAC 1 cut(s) 170
NsiI ATGCAT 1 cut(s) 1005
NspV TTCGAA 2 cut(s) 86, 617
PaqCI CACCTGC 1 cut(s) 86
PctI GAATGC 2 cut(s) 696, 1005
PfeI GAWTC 1 cut(s) 200
PflMI CCANNNNNTGG 2 cut(s) 558, 637
PfoI TCCNGGA 1 cut(s) 39
PkrI GCNGC 3 cut(s) 696, 699, 1071
PleI GAGTC 4 cut(s) 503, 604, 821, 1048
PpsI GAGTC 4 cut(s) 503, 604, 821, 1048
Psp6I CCWGG 1 cut(s) 39
PspFI CCCAGC 1 cut(s) 403
PspGI CCWGG 1 cut(s) 39
PspN4I GGNNCC 6 cut(s) 38, 179, 266, 287, 368, 787
PspPI GGNCC 2 cut(s) 286, 834
PsuI RGATCY 1 cut(s) 36
PvuII CAGCTG 1 cut(s) 407
RsaI GTAC 1 cut(s) 916
RsaNI GTAC 1 cut(s) 915
RseI CAYNNNNRTG 1 cut(s) 1034
SaqAI TTAA 4 cut(s) 720, 846, 960, 1077
SatI GCNGC 3 cut(s) 695, 698, 1070
Sau3AI GATC 5 cut(s) 36, 54, 409, 664, 862
Sau96I GGNCC 2 cut(s) 286, 834
SchI GAGTC 4 cut(s) 504, 604, 821, 1048
ScrFI CCNGG 3 cut(s) 41, 282, 996
SduI GDGCHC 2 cut(s) 269, 311
SfaNI GCATC 5 cut(s) 217, 519, 660, 733, 1012
SfcI CTRYAG 1 cut(s) 472
SfuI TTCGAA 2 cut(s) 86, 617
SinI GGWCC 1 cut(s) 834
SmiMI CAYNNNNRTG 1 cut(s) 1034
SpeI ACTAGT 1 cut(s) 911
Sse9I AATT 8 cut(s) 122, 137, 206, 250, 380, 392, 770, 961
SsiI CCGC 4 cut(s) 5, 70, 192, 695
SspMI CTAG 4 cut(s) 218, 668, 707, 912
StyD4I CCNGG 3 cut(s) 39, 280, 994
TaaI ACNGT 3 cut(s) 306, 746, 919
TaqI TCGA 3 cut(s) 86, 585, 617
TasI AATT 8 cut(s) 122, 137, 206, 250, 380, 392, 770, 961
TatI WGTACW 1 cut(s) 914
TauI GCSGC 1 cut(s) 697
TfiI GAWTC 1 cut(s) 200
Tru1I TTAA 4 cut(s) 720, 846, 960, 1077
Tru9I TTAA 4 cut(s) 720, 846, 960, 1077
TscAI CASTG 2 cut(s) 309, 469
TseFI GTSAC 1 cut(s) 170
TseI GCWGC 2 cut(s) 697, 1069
Tsp45I GTSAC 1 cut(s) 170
TspDTI ATGAA 4 cut(s) 329, 657, 821, 1062
TspGWI ACGGA 1 cut(s) 158
TspRI CASTG 2 cut(s) 309, 469
Van91I CCANNNNNTGG 2 cut(s) 558, 637
VpaK11BI GGWCC 1 cut(s) 834
XapI RAATTY 3 cut(s) 122, 206, 770
XbaI TCTAGA 1 cut(s) 706
XspI CTAG 4 cut(s) 218, 668, 707, 912
Zsp2I ATGCAT 1 cut(s) 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.