FvH4_1g17570

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000082
Physical Location & Seq
Reverse (-)
10217189 .. 10223375
6187 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g17570.t1

Sequence Viewer

Length: 1152 bp
ATGGCGGAAAGAGAAGACCTACCAGAAGAGATAATACTCAACATCTTGTCCAGATTGCCCGTGAAATCCTTAATCCGATTCACCTCCGTTTCGAAACGCATGCATTTCATTATACTCACCGATCCCACATTCGCCCAATCGCAACTCAAAGTAGCTCGTCAGCAGAAAACCCAAAGCCGCAGACTCCTCGTCTTCACCGACCCCCCTCAACTGGAATCCCTACCCTTGGATGCTGATACGCCGTCGTTTGGAGCCCCCTCCTCCGTTAGAAAGCTCCCTCTCCCTTTCCTGCAGCAACCGTCCGATCATGACAAGTTTCTGGGCTCCTGCAACGGTCTGGTATTTTTAACTTTGAATGTGGATTTCTATTATATCTGGAACCCATCGACTGGATTCTTCAAGAAATTACCAGACCCATGTTTTTGTTCCTATGGTCGAAACGGACGTCTAGCCTATGGTGTGGGCTATTTATCCGCCGGTGATGACTATAGAGTTTTGGTAGCCTGCTGTGACTTACGTGTAATGGCGTATGAGGTTGAGATGTTCTCATTGAGAACTCACATCTGGGAAAAGATTGAATGCGGTTCCTACTCCAACATTGGATTCCAGTTTGAGGGGACTCCATTCAACGATACACTTCATTGGCTAAATAGCTACGACAAGCATGAAATACTTTGTTTTAACTTGGCTGTGAAGGAGTTCCGGAGGATGTGGCTGCCTGATTTCGACAATGATGGTAAGAGCTTCTGCAAACTTGGGGTGTGTGGAGGGTGCCTGTGTGTGTCGCGTCATCCGGAGGGTGTTTTTGACTCCATTGATTTGTGGGTTATGAGGGAATATGGGGTGAGTGACTCGTGGACTATGCTCTATAGCTTAAAGGTATCCAATCCGCCTGAGTGCCTTAGCTTTGCGAGAAGATTATTGGTTGTGGGAAGTAATACAGTTGCTGTGAATTGGAGTGACGAGGGGTTCGAGTTGATGAGGATTGATCATAAAGCAGACCAGAATGTTGGCCACTATATGATTAAGGGGCGTTACGTTTCTATTGTTGAACATGAAGAGAGTCTACTTGGTATCAGTGGTTATCATCCAGCAGAAGAGAAAGAGCAGGTTCAGATACTCGAAACCCATCACAAGGCCTCACAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

384

Amino Acids

43.76

Weight (kDa)

5.86

Isoelectric Point (pI)

53.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 41 2.6e-09 F-box domain
F-box-like PF12937 6 - 41 7.1e-08 F-box-like
FBA_3 PF08268 105 - 281 4e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 448
Acc36I ACCTGC 1 cut(s) 1099
AccB1I GGYRCC 1 cut(s) 771
AccB7I CCANNNNNTGG 1 cut(s) 389
AccI GTMKAC 1 cut(s) 1066
AccII CGCG 1 cut(s) 787
AccIII TCCGGA 2 cut(s) 702, 793
AciI CCGC 5 cut(s) 5, 178, 474, 582, 890
AclWI GGATC 1 cut(s) 116
AcoI YGGCCR 1 cut(s) 1012
AcyI GRCGYC 1 cut(s) 445
AfiI CCNNNNNNNGG 6 cut(s) 211, 226, 248, 389, 613, 1135
AflIII ACRYGT 1 cut(s) 517
AgsI TTSAA 5 cut(s) 355, 400, 578, 628, 1052
AhdI GACNNNNNGTC 1 cut(s) 188
AjuI GAANNNNNNNTTGG 2 cut(s) 587, 619
AluBI AGCT 7 cut(s) 155, 274, 654, 744, 873, 906, 1149
AluI AGCT 7 cut(s) 155, 274, 654, 744, 873, 906, 1149
AlwI GGATC 1 cut(s) 116
AlwNI CAGNNNCTG 1 cut(s) 947
Aor13HI TCCGGA 2 cut(s) 702, 793
AoxI GGCC 2 cut(s) 1012, 1137
ApeKI GCWGC 2 cut(s) 292, 715
ArsI GACNNNNNNTTYG 4 cut(s) 430, 462, 953, 985
Asp700I GAANNNNTTC 1 cut(s) 698
AsuHPI GGTGA 5 cut(s) 73, 109, 187, 491, 856
AsuII TTCGAA 1 cut(s) 92
BalI TGGCCA 1 cut(s) 1014
BanI GGYRCC 1 cut(s) 771
BanII GRGCYC 2 cut(s) 256, 326
BarI GAAGNNNNNNTAC 4 cut(s) 18, 50, 1050, 1082
BauI CACGAG 1 cut(s) 853
BbsI GAAGAC 2 cut(s) 21, 184
BbvI GCAGC 2 cut(s) 304, 702
BccI CCATC 3 cut(s) 391, 728, 1137
BceAI ACGGC 1 cut(s) 226
BcgI CGANNNNNNTGC 4 cut(s) 82, 116, 169, 203
BciVI GTATCC 1 cut(s) 892
BclI TGATCA 1 cut(s) 988
BfaI CTAG 1 cut(s) 449
BfmI CTRYAG 3 cut(s) 290, 487, 868
BfuAI ACCTGC 1 cut(s) 1099
BfuI GTATCC 1 cut(s) 892
BisI GCNGC 3 cut(s) 178, 293, 716
BlsI GCNGC 3 cut(s) 179, 294, 717
BmeRI GACNNNNNGTC 1 cut(s) 188
BmiI GGNNCC 5 cut(s) 253, 325, 380, 586, 773
BmsI GCATC 1 cut(s) 220
BpiI GAAGAC 2 cut(s) 21, 184
BplI GAGNNNNNCTC 2 cut(s) 530, 562
Bpu10I CCTNAGC 1 cut(s) 902
Bpu14I TTCGAA 1 cut(s) 92
BsaAI YACGTR 1 cut(s) 518
BsaHI GRCGYC 1 cut(s) 445
BsaJI CCNNGG 1 cut(s) 225
BsaWI WCCGGW 2 cut(s) 702, 793
Bsc4I CCNNNNNNNGG 6 cut(s) 211, 226, 248, 389, 613, 1135
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 3 cut(s) 216, 394, 607
BseAI TCCGGA 2 cut(s) 702, 793
BseDI CCNNGG 1 cut(s) 225
BseGI GGATG 4 cut(s) 235, 714, 790, 1087
BseLI CCNNNNNNNGG 6 cut(s) 211, 226, 248, 389, 613, 1135
BseMII CTCAG 1 cut(s) 885
BseNI ACTGG 3 cut(s) 216, 394, 607
BseRI GAGGAG 2 cut(s) 176, 250
BseXI GCAGC 2 cut(s) 304, 702
Bsh1236I CGCG 1 cut(s) 787
BshFI GGCC 2 cut(s) 1014, 1139
BshNI GGYRCC 1 cut(s) 771
BsiSI CCGG 3 cut(s) 477, 703, 794
BslFI GGGAC 1 cut(s) 631
BslI CCNNNNNNNGG 6 cut(s) 211, 226, 248, 389, 613, 1135
BsmFI GGGAC 1 cut(s) 631
BsmI GAATGC 1 cut(s) 584
BsnI GGCC 2 cut(s) 1014, 1139
Bsp119I TTCGAA 1 cut(s) 92
Bsp1286I GDGCHC 2 cut(s) 256, 326
Bsp13I TCCGGA 2 cut(s) 702, 793
Bsp143I GATC 3 cut(s) 121, 304, 988
BspACI CCGC 5 cut(s) 5, 178, 474, 582, 890
BspANI GGCC 2 cut(s) 1014, 1139
BspCNI CTCAG 1 cut(s) 886
BspEI TCCGGA 2 cut(s) 702, 793
BspFNI CGCG 1 cut(s) 787
BspHI TCATGA 1 cut(s) 307
BspLI GGNNCC 5 cut(s) 253, 325, 380, 586, 773
BspMAI CTGCAG 1 cut(s) 294
BspMI ACCTGC 1 cut(s) 1099
BspPI GGATC 1 cut(s) 116
BspT104I TTCGAA 1 cut(s) 92
BspT107I GGYRCC 1 cut(s) 771
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 3 cut(s) 216, 394, 607
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 1 cut(s) 225
BssMI GATC 3 cut(s) 121, 304, 988
BssNI GRCGYC 1 cut(s) 445
BssSI CACGAG 1 cut(s) 853
BssT1I CCWWGG 1 cut(s) 225
Bst2BI CACGAG 1 cut(s) 853
Bst4CI ACNGT 3 cut(s) 300, 335, 943
Bst6I CTCTTC 3 cut(s) 21, 1053, 1092
BstACI GRCGYC 1 cut(s) 445
BstBAI YACGTR 1 cut(s) 518
BstBI TTCGAA 1 cut(s) 92
BstC8I GCNNGC 2 cut(s) 101, 505
BstDEI CTNAG 2 cut(s) 894, 902
BstF5I GGATG 4 cut(s) 235, 714, 790, 1087
BstFNI CGCG 1 cut(s) 787
BstKTI GATC 3 cut(s) 124, 307, 991
BstMBI GATC 3 cut(s) 121, 304, 988
BstNSI RCATGY 1 cut(s) 103
BstSFI CTRYAG 3 cut(s) 290, 487, 868
BstUI CGCG 1 cut(s) 787
BstV1I GCAGC 2 cut(s) 304, 702
BstV2I GAAGAC 2 cut(s) 21, 184
BstXI CCANNNNNNTGG 1 cut(s) 1010
BsuI GTATCC 1 cut(s) 892
BsuRI GGCC 2 cut(s) 1014, 1139
BtsCI GGATG 4 cut(s) 235, 714, 790, 1087
BtsIMutI CAGTG 1 cut(s) 1084
BveI ACCTGC 1 cut(s) 1099
Cac8I GCNNGC 2 cut(s) 101, 505
CaiI CAGNNNCTG 1 cut(s) 947
CciI TCATGA 1 cut(s) 307
Cfr10I RCCGGY 1 cut(s) 476
CseI GACGC 1 cut(s) 776
CviAII CATG 5 cut(s) 100, 308, 417, 665, 1055
DdeI CTNAG 2 cut(s) 894, 902
DpnI GATC 3 cut(s) 123, 306, 990
DpnII GATC 3 cut(s) 121, 304, 988
DriI GACNNNNNGTC 1 cut(s) 188
EaeI YGGCCR 1 cut(s) 1012
Eam1104I CTCTTC 3 cut(s) 21, 1053, 1092
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 3 cut(s) 21, 1053, 1092
EciI GGCGGA 3 cut(s) 20, 463, 879
Eco130I CCWWGG 1 cut(s) 225
Eco147I AGGCCT 1 cut(s) 1139
Eco24I GRGCYC 2 cut(s) 256, 326
EcoT14I CCWWGG 1 cut(s) 225
EcoT22I ATGCAT 1 cut(s) 105
EcoT38I GRGCYC 2 cut(s) 256, 326
ErhI CCWWGG 1 cut(s) 225
FaeI CATG 5 cut(s) 103, 311, 420, 668, 1058
FaqI GGGAC 1 cut(s) 631
FatI CATG 5 cut(s) 99, 307, 416, 664, 1054
FbaI TGATCA 1 cut(s) 988
FblI GTMKAC 1 cut(s) 1066
Fnu4HI GCNGC 3 cut(s) 178, 293, 716
FokI GGATG 4 cut(s) 242, 721, 777, 1074
FriOI GRGCYC 2 cut(s) 256, 326
Fsp4HI GCNGC 3 cut(s) 178, 293, 716
FspBI CTAG 1 cut(s) 449
GluI GCNGC 3 cut(s) 178, 293, 716
HaeIII GGCC 2 cut(s) 1014, 1139
HapII CCGG 3 cut(s) 477, 703, 794
HgaI GACGC 1 cut(s) 776
Hin1I GRCGYC 1 cut(s) 445
Hin1II CATG 5 cut(s) 103, 311, 420, 668, 1058
HinfI GANTC 9 cut(s) 78, 183, 215, 393, 603, 619, 809, 851, 1063
HpaII CCGG 3 cut(s) 477, 703, 794
HphI GGTGA 5 cut(s) 73, 109, 187, 491, 856
Hpy166II GTNNAC 2 cut(s) 858, 1067
Hpy188I TCNGA 3 cut(s) 77, 304, 1116
Hpy188III TCNNGA 6 cut(s) 51, 308, 376, 400, 703, 794
Hpy8I GTNNAC 2 cut(s) 858, 1067
Hpy99I CGWCG 1 cut(s) 247
HpyAV CCTTC 1 cut(s) 688
HpyCH4III ACNGT 3 cut(s) 300, 335, 943
HpyCH4IV ACGT 3 cut(s) 445, 517, 1038
HpyCH4V TGCA 4 cut(s) 103, 292, 330, 750
HpyF3I CTNAG 2 cut(s) 894, 902
HpySE526I ACGT 3 cut(s) 445, 517, 1038
Hsp92I GRCGYC 1 cut(s) 445
Hsp92II CATG 5 cut(s) 103, 311, 420, 668, 1058
Kpn2I TCCGGA 2 cut(s) 702, 793
Ksp22I TGATCA 1 cut(s) 988
Kzo9I GATC 3 cut(s) 121, 304, 988
LmnI GCTCC 3 cut(s) 251, 279, 329
Lsp1109I GCAGC 2 cut(s) 304, 702
LweI GCATC 1 cut(s) 220
MaeI CTAG 1 cut(s) 449
MaeII ACGT 3 cut(s) 445, 517, 1038
MaeIII GTNAC 4 cut(s) 509, 848, 959, 1034
MalI GATC 3 cut(s) 123, 306, 990
MboI GATC 3 cut(s) 121, 304, 988
MboII GAAGA 7 cut(s) 26, 38, 184, 388, 927, 1070, 1109
MhlI GDGCHC 2 cut(s) 256, 326
MlsI TGGCCA 1 cut(s) 1014
MluCI AATT 2 cut(s) 404, 952
MluNI TGGCCA 1 cut(s) 1014
MlyI GAGTC 5 cut(s) 177, 613, 803, 845, 1072
MmeI TCCRAC 1 cut(s) 618
Mox20I TGGCCA 1 cut(s) 1014
Mph1103I ATGCAT 1 cut(s) 105
MroI TCCGGA 2 cut(s) 702, 793
MroXI GAANNNNTTC 1 cut(s) 698
MscI TGGCCA 1 cut(s) 1014
MseI TTAA 5 cut(s) 71, 347, 681, 875, 1026
Msp20I TGGCCA 1 cut(s) 1014
MspI CCGG 3 cut(s) 477, 703, 794
Mva1269I GAATGC 1 cut(s) 584
MvnI CGCG 1 cut(s) 787
NdeII GATC 3 cut(s) 121, 304, 988
NlaIII CATG 5 cut(s) 103, 311, 420, 668, 1058
NlaIV GGNNCC 5 cut(s) 253, 325, 380, 586, 773
NmuCI GTSAC 3 cut(s) 509, 848, 959
NsiI ATGCAT 1 cut(s) 105
NspI RCATGY 1 cut(s) 103
NspV TTCGAA 1 cut(s) 92
PaeI GCATGC 1 cut(s) 103
PagI TCATGA 1 cut(s) 307
PceI AGGCCT 1 cut(s) 1139
PcsI WCGNNNNNNNCGW 3 cut(s) 195, 442, 969
PctI GAATGC 1 cut(s) 584
PdmI GAANNNNTTC 1 cut(s) 698
PfeI GAWTC 4 cut(s) 78, 215, 393, 603
PflMI CCANNNNNTGG 1 cut(s) 389
PkrI GCNGC 3 cut(s) 179, 294, 717
PleI GAGTC 5 cut(s) 177, 613, 803, 845, 1071
PpsI GAGTC 5 cut(s) 177, 613, 803, 845, 1071
Ppu21I YACGTR 1 cut(s) 518
PspN4I GGNNCC 5 cut(s) 253, 325, 380, 586, 773
PstI CTGCAG 1 cut(s) 294
PstNI CAGNNNCTG 1 cut(s) 947
SaqAI TTAA 5 cut(s) 71, 347, 681, 875, 1026
SatI GCNGC 3 cut(s) 178, 293, 716
Sau3AI GATC 3 cut(s) 121, 304, 988
SchI GAGTC 5 cut(s) 177, 613, 803, 845, 1072
SduI GDGCHC 2 cut(s) 256, 326
SfaNI GCATC 1 cut(s) 220
SfcI CTRYAG 3 cut(s) 290, 487, 868
SfuI TTCGAA 1 cut(s) 92
SgrAI CRCCGGYG 1 cut(s) 476
SphI GCATGC 1 cut(s) 103
Sse9I AATT 2 cut(s) 404, 952
SseBI AGGCCT 1 cut(s) 1139
SsiI CCGC 5 cut(s) 5, 178, 474, 582, 890
SspMI CTAG 1 cut(s) 449
StuI AGGCCT 1 cut(s) 1139
StyI CCWWGG 1 cut(s) 225
TaaI ACNGT 3 cut(s) 300, 335, 943
TaiI ACGT 3 cut(s) 448, 520, 1041
TaqI TCGA 6 cut(s) 92, 386, 436, 726, 972, 1122
TasI AATT 2 cut(s) 404, 952
TauI GCSGC 1 cut(s) 180
TfiI GAWTC 4 cut(s) 78, 215, 393, 603
Tru1I TTAA 5 cut(s) 71, 347, 681, 875, 1026
Tru9I TTAA 5 cut(s) 71, 347, 681, 875, 1026
TscAI CASTG 1 cut(s) 1084
TseFI GTSAC 3 cut(s) 509, 848, 959
TseI GCWGC 2 cut(s) 292, 715
Tsp45I GTSAC 3 cut(s) 509, 848, 959
TspDTI ATGAA 4 cut(s) 97, 629, 681, 1071
TspGWI ACGGA 3 cut(s) 76, 253, 456
TspRI CASTG 1 cut(s) 1084
Van91I CCANNNNNTGG 1 cut(s) 389
XceI RCATGY 1 cut(s) 103
XmiI GTMKAC 1 cut(s) 1066
XmnI GAANNNNTTC 1 cut(s) 698
XspI CTAG 1 cut(s) 449
ZraI GACGTC 1 cut(s) 446
Zsp2I ATGCAT 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.