Rorug05G0475500

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000082
Physical Location & Seq
Reverse (-)
65320106 .. 65321314
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0475500.1

Sequence Viewer

Length: 996 bp
ATGATGAACTTGGTATTCATAGCTTTGTATGCTTTCATGGCTATTTCAAATTCTCAAGCCGAAGGAACAAACACGAGTACTTCAGCGATTCTCATAACAGTTGACCAATCGGGCAAAGGTGACTACAAGAAAATACAAGAAGCCATTGATTCAGTGGCGTCCAACAACGCAGAGCTCGTGTTTATTAGGGTTAAGCCCGGAGTATATGAAGAAAAAGTTATGGTTCCGGCGGACAAGCCGTTTATAACAATAAGTGGCACAAAGGCAGCTGACACGGTTATAACATGGAACGATAGTGGGGACATATTCGAGTCTCCAACTTTCTCTGTCCTGGCCTCTGATTTCATAGGGCGTTACCTCACAATTCAGAATACATATGGAGCTGGTGTGAAAGCGGTGGCATTACGGGTGTCTGGAGATAGAGCAGCATTCTATGGGTGCAGAATTTTGTCTCATCAAGACACCCTCCTTGATGATACTGGGAGGCACTACTACAACAACTGTTACATTGAAGGAGATGTAGACTTCATATGTGGAAATGCTGCTTCTTTCTTTGAGAAGTGCCATTTGCATTCTCTTTCGGTAGGAACCGGGGCCATAACGGCCCAACGGAGAATGTCCCCGGCTGAAGACACTGGGTTCATGTTCTTCGGGTGCAAGATCACCGGTGTCAAAACAGCAGTGTTGGGAAGGCCTTGGGGTACATATTCAAGAGTGGTCTTTGTCTTCACTTACATGACTAGCGCCATACTGCCACAAGGTTGGGACGATTGGGGAAACTCAGCCGACCAATTAAGAACCGTATACTATGGGCAGTATAAATGTTCTGGACGGGGAGCAACTACATCGAAACGAGTAGAATGGGCACGCGACCTTACGAGCGAAGAAGTCGAACCCTTCTTGACTAAGGACATGATTGATGCCAATGCTTGGTTAAGGTCAGCACCAACCAGTTTCAAGAAGAAAGCACTCAGTGCCAATGACACCAAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

331

Amino Acids

36.4

Weight (kDa)

6.12

Isoelectric Point (pI)

29.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pectinesterase PF01095 32 - 308 3.1e-70 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 245, 281
AccB7I CCANNNNNTGG 1 cut(s) 930
AccI GTMKAC 2 cut(s) 522, 804
AccII CGCG 1 cut(s) 870
AciI CCGC 2 cut(s) 230, 395
AcsI RAATTY 2 cut(s) 49, 444
AcuI CTGAAG 2 cut(s) 66, 648
AcyI GRCGYC 1 cut(s) 158
AdeI CACNNNGTG 1 cut(s) 974
AfaI GTAC 2 cut(s) 79, 703
AfiI CCNNNNNNNGG 1 cut(s) 930
AgeI ACCGGT 1 cut(s) 665
AgsI TTSAA 4 cut(s) 48, 512, 711, 958
AjnI CCWGG 1 cut(s) 330
AluBI AGCT 4 cut(s) 23, 175, 269, 383
AluI AGCT 4 cut(s) 23, 175, 269, 383
Alw21I GWGCWC 1 cut(s) 177
Alw26I GTCTC 2 cut(s) 318, 456
AoxI GGCC 4 cut(s) 333, 594, 603, 692
ApeKI GCWGC 3 cut(s) 266, 425, 542
ApoI RAATTY 2 cut(s) 49, 444
AsiGI ACCGGT 1 cut(s) 665
AspLEI GCGC 1 cut(s) 746
AspS9I GGNCC 2 cut(s) 594, 604
AsuC2I CCSGG 3 cut(s) 198, 592, 623
AsuHPI GGTGA 2 cut(s) 131, 655
BaeGI GKGCMC 1 cut(s) 868
BanII GRGCYC 1 cut(s) 177
BauI CACGAG 2 cut(s) 73, 176
BbsI GAAGAC 2 cut(s) 636, 718
Bbv12I GWGCWC 1 cut(s) 177
BbvI GCAGC 3 cut(s) 278, 437, 529
BceAI ACGGC 2 cut(s) 223, 618
BcgI CGANNNNNNTGC 2 cut(s) 828, 862
BciT130I CCWGG 1 cut(s) 332
BcnI CCSGG 3 cut(s) 198, 592, 623
BcoDI GTCTC 2 cut(s) 318, 456
BfaI CTAG 1 cut(s) 741
BfoI RGCGCY 1 cut(s) 747
BglI GCCNNNNNGGC 1 cut(s) 602
BisI GCNGC 3 cut(s) 267, 426, 543
BlsI GCNGC 3 cut(s) 268, 427, 544
BmcAI AGTACT 1 cut(s) 79
Bme1390I CCNGG 4 cut(s) 198, 332, 592, 623
BmgT120I GGNCC 2 cut(s) 594, 604
BmiI GGNNCC 3 cut(s) 225, 589, 595
BmrFI CCNGG 4 cut(s) 198, 332, 592, 623
BmrI ACTGGG 2 cut(s) 489, 645
BmsI GCATC 1 cut(s) 910
BmuI ACTGGG 2 cut(s) 489, 645
BpiI GAAGAC 2 cut(s) 636, 718
BpmI CTGGAG 1 cut(s) 435
BpuEI CTTGAG 1 cut(s) 39
BpuMI CCSGG 3 cut(s) 198, 592, 623
BsaHI GRCGYC 1 cut(s) 158
BsaJI CCNNGG 3 cut(s) 591, 621, 695
BsaWI WCCGGW 1 cut(s) 665
BsaXI ACNNNNNCTCC 2 cut(s) 372, 402
Bsc4I CCNNNNNNNGG 1 cut(s) 930
Bse118I RCCGGY 1 cut(s) 665
Bse1I ACTGG 3 cut(s) 484, 640, 951
BseBI CCWGG 1 cut(s) 332
BseDI CCNNGG 3 cut(s) 591, 621, 695
BseLI CCNNNNNNNGG 1 cut(s) 930
BseMII CTCAG 2 cut(s) 795, 985
BseNI ACTGG 3 cut(s) 484, 640, 951
BseSI GKGCMC 1 cut(s) 868
BseXI GCAGC 3 cut(s) 278, 437, 529
BsgI GTGCAG 1 cut(s) 460
Bsh1236I CGCG 1 cut(s) 870
BshFI GGCC 4 cut(s) 335, 596, 605, 694
BshTI ACCGGT 1 cut(s) 665
BsiHKAI GWGCWC 1 cut(s) 177
BsiSI CCGG 5 cut(s) 198, 227, 591, 623, 666
BslFI GGGAC 3 cut(s) 314, 604, 779
BslI CCNNNNNNNGG 1 cut(s) 930
BsmAI GTCTC 2 cut(s) 318, 456
BsmFI GGGAC 3 cut(s) 314, 604, 779
BsmI GAATGC 2 cut(s) 428, 571
BsnI GGCC 4 cut(s) 335, 596, 605, 694
Bsp1286I GDGCHC 2 cut(s) 177, 868
Bsp143I GATC 1 cut(s) 660
BspACI CCGC 2 cut(s) 230, 395
BspANI GGCC 4 cut(s) 335, 596, 605, 694
BspCNI CTCAG 2 cut(s) 794, 984
BspFNI CGCG 1 cut(s) 870
BspLI GGNNCC 3 cut(s) 225, 589, 595
BsrFI RCCGGY 1 cut(s) 665
BsrI ACTGG 3 cut(s) 484, 640, 951
BssAI RCCGGY 1 cut(s) 665
BssECI CCNNGG 3 cut(s) 591, 621, 695
BssMI GATC 1 cut(s) 660
BssNAI GTATAC 1 cut(s) 805
BssNI GRCGYC 1 cut(s) 158
BssSI CACGAG 2 cut(s) 73, 176
BssT1I CCWWGG 1 cut(s) 695
Bst1107I GTATAC 1 cut(s) 805
Bst2BI CACGAG 2 cut(s) 73, 176
Bst2UI CCWGG 1 cut(s) 332
Bst4CI ACNGT 4 cut(s) 100, 277, 503, 802
BstACI GRCGYC 1 cut(s) 158
BstAPI GCANNNNNTGC 1 cut(s) 974
BstC8I GCNNGC 1 cut(s) 868
BstDEI CTNAG 3 cut(s) 781, 906, 971
BstFNI CGCG 1 cut(s) 870
BstH2I RGCGCY 1 cut(s) 747
BstHHI GCGC 1 cut(s) 746
BstKTI GATC 1 cut(s) 663
BstMAI GTCTC 2 cut(s) 318, 456
BstMBI GATC 1 cut(s) 660
BstMWI GCNNNNNNNGC 4 cut(s) 29, 38, 602, 974
BstNI CCWGG 1 cut(s) 332
BstSCI CCNGG 4 cut(s) 196, 330, 590, 621
BstSLI GKGCMC 1 cut(s) 868
BstUI CGCG 1 cut(s) 870
BstV1I GCAGC 3 cut(s) 278, 437, 529
BstV2I GAAGAC 2 cut(s) 636, 718
BstXI CCANNNNNNTGG 1 cut(s) 762
BstZ17I GTATAC 1 cut(s) 805
BsuRI GGCC 4 cut(s) 335, 596, 605, 694
BtsI GCAGTG 1 cut(s) 687
BtsIMutI CAGTG 4 cut(s) 159, 633, 687, 979
Cac8I GCNNGC 1 cut(s) 868
CfoI GCGC 1 cut(s) 746
Cfr10I RCCGGY 1 cut(s) 665
Cfr13I GGNCC 2 cut(s) 594, 604
CseI GACGC 1 cut(s) 147
Csp6I GTAC 2 cut(s) 78, 702
CspAI ACCGGT 1 cut(s) 665
CviAII CATG 5 cut(s) 37, 285, 643, 736, 913
CviQI GTAC 2 cut(s) 78, 702
DdeI CTNAG 3 cut(s) 781, 906, 971
DpnI GATC 1 cut(s) 662
DpnII GATC 1 cut(s) 660
DraIII CACNNNGTG 1 cut(s) 974
EciI GGCGGA 1 cut(s) 245
Ecl136II GAGCTC 1 cut(s) 175
Eco130I CCWWGG 1 cut(s) 695
Eco147I AGGCCT 1 cut(s) 694
Eco24I GRGCYC 1 cut(s) 177
Eco53kI GAGCTC 1 cut(s) 175
Eco57I CTGAAG 2 cut(s) 66, 648
EcoICRI GAGCTC 1 cut(s) 175
EcoRII CCWGG 1 cut(s) 330
EcoT14I CCWWGG 1 cut(s) 695
EcoT38I GRGCYC 1 cut(s) 177
ErhI CCWWGG 1 cut(s) 695
FaeI CATG 5 cut(s) 40, 288, 646, 739, 916
FaqI GGGAC 3 cut(s) 314, 604, 779
FatI CATG 5 cut(s) 36, 284, 642, 735, 912
FauNDI CATATG 2 cut(s) 376, 530
FblI GTMKAC 2 cut(s) 522, 804
Fnu4HI GCNGC 3 cut(s) 267, 426, 543
FriOI GRGCYC 1 cut(s) 177
Fsp4HI GCNGC 3 cut(s) 267, 426, 543
FspBI CTAG 1 cut(s) 741
GlaI GCGC 1 cut(s) 745
GluI GCNGC 3 cut(s) 267, 426, 543
GsuI CTGGAG 1 cut(s) 435
HaeII RGCGCY 1 cut(s) 747
HaeIII GGCC 4 cut(s) 335, 596, 605, 694
HapII CCGG 5 cut(s) 198, 227, 591, 623, 666
HgaI GACGC 1 cut(s) 147
HhaI GCGC 1 cut(s) 746
Hin1I GRCGYC 1 cut(s) 158
Hin1II CATG 5 cut(s) 40, 288, 646, 739, 916
Hin6I GCGC 1 cut(s) 744
HinP1I GCGC 1 cut(s) 744
HincII GTYRAC 1 cut(s) 103
HindII GTYRAC 1 cut(s) 103
HinfI GANTC 3 cut(s) 88, 149, 311
HpaII CCGG 5 cut(s) 198, 227, 591, 623, 666
HphI GGTGA 2 cut(s) 131, 655
Hpy166II GTNNAC 3 cut(s) 103, 523, 805
Hpy188I TCNGA 2 cut(s) 340, 369
Hpy188III TCNNGA 6 cut(s) 414, 458, 711, 828, 901, 958
Hpy8I GTNNAC 3 cut(s) 103, 523, 805
HpyAV CCTTC 4 cut(s) 56, 506, 684, 907
HpyCH4III ACNGT 4 cut(s) 100, 277, 503, 802
HpyCH4V TGCA 3 cut(s) 441, 571, 657
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 38, 602, 974
HpyF3I CTNAG 3 cut(s) 781, 906, 971
Hsp92I GRCGYC 1 cut(s) 158
Hsp92II CATG 5 cut(s) 40, 288, 646, 739, 916
HspAI GCGC 1 cut(s) 744
Kzo9I GATC 1 cut(s) 660
LmnI GCTCC 2 cut(s) 380, 836
Lsp1109I GCAGC 3 cut(s) 278, 437, 529
LweI GCATC 1 cut(s) 910
MaeI CTAG 1 cut(s) 741
MaeIII GTNAC 3 cut(s) 119, 353, 503
MalI GATC 1 cut(s) 662
MboI GATC 1 cut(s) 660
MboII GAAGA 6 cut(s) 221, 640, 641, 718, 896, 973
MhlI GDGCHC 2 cut(s) 177, 868
MluCI AATT 5 cut(s) 49, 363, 444, 791, 991
MlyI GAGTC 1 cut(s) 320
MmeI TCCRAC 2 cut(s) 186, 341
MnlI CCTC 4 cut(s) 346, 368, 476, 477
MseI TTAA 4 cut(s) 192, 794, 935, 994
MslI CAYNNNNRTG 1 cut(s) 734
MspA1I CMGCKG 1 cut(s) 269
MspI CCGG 5 cut(s) 198, 227, 591, 623, 666
MspR9I CCNGG 4 cut(s) 198, 332, 592, 623
Mva1269I GAATGC 2 cut(s) 428, 571
MvaI CCWGG 1 cut(s) 332
MvnI CGCG 1 cut(s) 870
MwoI GCNNNNNNNGC 4 cut(s) 29, 38, 602, 974
NciI CCSGG 3 cut(s) 198, 592, 623
NdeI CATATG 2 cut(s) 376, 530
NdeII GATC 1 cut(s) 660
NlaIII CATG 5 cut(s) 40, 288, 646, 739, 916
NlaIV GGNNCC 3 cut(s) 225, 589, 595
NmuCI GTSAC 1 cut(s) 119
PceI AGGCCT 1 cut(s) 694
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 2 cut(s) 428, 571
PfeI GAWTC 2 cut(s) 88, 149
PflMI CCANNNNNTGG 1 cut(s) 930
PinAI ACCGGT 1 cut(s) 665
PkrI GCNGC 3 cut(s) 268, 427, 544
PleI GAGTC 1 cut(s) 319
PpsI GAGTC 1 cut(s) 319
PsiI TTATAA 2 cut(s) 245, 281
Psp124BI GAGCTC 1 cut(s) 177
Psp6I CCWGG 1 cut(s) 330
PspGI CCWGG 1 cut(s) 330
PspN4I GGNNCC 3 cut(s) 225, 589, 595
PspPI GGNCC 2 cut(s) 594, 604
PvuII CAGCTG 1 cut(s) 269
RsaI GTAC 2 cut(s) 79, 703
RsaNI GTAC 2 cut(s) 78, 702
RseI CAYNNNNRTG 1 cut(s) 734
SacI GAGCTC 1 cut(s) 177
SaqAI TTAA 4 cut(s) 192, 794, 935, 994
SatI GCNGC 3 cut(s) 267, 426, 543
Sau3AI GATC 1 cut(s) 660
Sau96I GGNCC 2 cut(s) 594, 604
ScaI AGTACT 1 cut(s) 79
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 4 cut(s) 198, 332, 592, 623
SduI GDGCHC 2 cut(s) 177, 868
SetI ASST 9 cut(s) 25, 121, 177, 271, 360, 385, 763, 876, 941
SfaNI GCATC 1 cut(s) 910
SfiI GGCCNNNNNGGCC 1 cut(s) 602
SgrAI CRCCGGYG 1 cut(s) 665
SmiMI CAYNNNNRTG 1 cut(s) 734
SmlI CTYRAG 1 cut(s) 54
SmoI CTYRAG 1 cut(s) 54
Sse9I AATT 5 cut(s) 49, 363, 444, 791, 991
SseBI AGGCCT 1 cut(s) 694
SsiI CCGC 2 cut(s) 230, 395
SspMI CTAG 1 cut(s) 741
SstI GAGCTC 1 cut(s) 177
StuI AGGCCT 1 cut(s) 694
StyD4I CCNGG 4 cut(s) 196, 330, 590, 621
StyI CCWWGG 1 cut(s) 695
TaaI ACNGT 4 cut(s) 100, 277, 503, 802
TaqI TCGA 3 cut(s) 309, 848, 891
TasI AATT 5 cut(s) 49, 363, 444, 791, 991
TatI WGTACW 1 cut(s) 77
TfiI GAWTC 2 cut(s) 88, 149
Tru1I TTAA 4 cut(s) 192, 794, 935, 994
Tru9I TTAA 4 cut(s) 192, 794, 935, 994
TscAI CASTG 4 cut(s) 159, 640, 687, 979
TseFI GTSAC 1 cut(s) 119
TseI GCWGC 3 cut(s) 266, 425, 542
Tsp45I GTSAC 1 cut(s) 119
TspDTI ATGAA 7 cut(s) 7, 20, 25, 222, 334, 517, 631
TspGWI ACGGA 1 cut(s) 625
TspRI CASTG 4 cut(s) 159, 640, 687, 979
Van91I CCANNNNNTGG 1 cut(s) 930
XapI RAATTY 2 cut(s) 49, 444
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XmiI GTMKAC 2 cut(s) 522, 804
XspI CTAG 1 cut(s) 741
ZrmI AGTACT 1 cut(s) 79
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.