Rroxscaffold_1G00002220

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000082
Physical Location & Seq
Reverse (-)
2641142 .. 2642196
1055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00002220.1

Sequence Viewer

Length: 954 bp
ATGGCGGAGCACATACCTGAACATGTGATAGCGAAAATCTTCCAGTGGTTGCCTATCAAATCCTTAATCCGCTTCACATCCATTTCGAAGCGCTGGCGCTTCATCATACTCCACGACCCTCACTTCGCCACATCCCAGTACCAAATCGCTTCCCACAACAACAAAAGTGTCTGCTTCCGCAGCCGCCTTGATTCTGCCTTCTTCGAATCGGTCAACTTGCAAACGACGTCGTCGGCTCTGAGAAATCTTCGCTGCCCATTCAAGCAACCAGACAGTATGGTTTTCATACACTCCTCATGCCGTGGTTTGGTATTTGCAACTTTTAAAGGGCAGGGAATAGTAGCGAGGTATATATGGAACCCATCAACTGGGTTCTTCAAAAAACTACCTGATCCAGGTGTTAAAAATGAGTTCCAAGTCTTCAATGGTTTTGGGTATATCTCGGCCACCGACGACTACAAGATTCTCATAGCCAACTCTAAATTTGAGGAGGAGAGGAAGCCAAGATCCACATCTTCTTATCGAAATCCAACTCTTGGAAAAGGATTCAAGATTCCCAATGAGGAATTCCGGACAATGCCGCTGCCTGTTGTCGAGGATGACTTTACTGCTGACTATTTCAGACATCTAGGGGACTTTGGAGGTTGCCTGTGTGTGTTTGGTCAGGCTGATACTAATGCTGGCTCTATGGATTTGTGGGTCATGAGGGAATATGATGTGGGTAACTCATGGACTAAGCTGTTTAACTTAAAGTTGTCCAATCAGCCTGAGCAGATATATCATGTCAACCCAATCTTTGTTATGGAAACTAGTACATTTCTGGAGATACATTCTAACTCTGAAAGGAGGGTGAAGTTGGTAAGGAGTTATTATAATGAAGAGAAGATCGAAGAGATTCATATGGATATACGGTCAATGATTGGATATGAAGAGAGTCTACTTTGGCTTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

317

Amino Acids

36.87

Weight (kDa)

7.69

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 3 - 39 4.1e-06 F-box-like
F-box PF00646 4 - 39 1.6e-07 F-box domain
FBA_3 PF08268 57 - 163 1e-07 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 873
AatII GACGTC 1 cut(s) 230
AccB7I CCANNNNNTGG 2 cut(s) 368, 536
AccI GTMKAC 1 cut(s) 937
AccIII TCCGGA 1 cut(s) 570
AciI CCGC 5 cut(s) 5, 70, 178, 184, 581
AclWI GGATC 2 cut(s) 386, 501
AcoI YGGCCR 1 cut(s) 444
AcsI RAATTY 2 cut(s) 482, 566
AcyI GRCGYC 1 cut(s) 227
AfaI GTAC 2 cut(s) 140, 814
AfeI AGCGCT 1 cut(s) 92
AfiI CCNNNNNNNGG 4 cut(s) 307, 368, 395, 536
AflIII ACRYGT 1 cut(s) 22
AgsI TTSAA 4 cut(s) 262, 379, 424, 550
AhlI ACTAGT 1 cut(s) 809
AjnI CCWGG 1 cut(s) 394
AjuI GAANNNNNNNTTGG 2 cut(s) 551, 583
AluBI AGCT 1 cut(s) 739
AluI AGCT 1 cut(s) 739
Alw21I GWGCWC 1 cut(s) 12
AlwI GGATC 2 cut(s) 386, 501
Aor13HI TCCGGA 1 cut(s) 570
Aor51HI AGCGCT 1 cut(s) 92
AoxI GGCC 1 cut(s) 444
ApeKI GCWGC 3 cut(s) 180, 252, 583
ApoI RAATTY 2 cut(s) 482, 566
ArsI GACNNNNNNTTYG 2 cut(s) 107, 139
Asp700I GAANNNNTTC 2 cut(s) 38, 894
AspLEI GCGC 2 cut(s) 93, 99
AsuHPI GGTGA 1 cut(s) 862
AsuII TTCGAA 2 cut(s) 86, 204
BarI GAAGNNNNNNTAC 2 cut(s) 921, 953
BbsI GAAGAC 1 cut(s) 412
Bbv12I GWGCWC 1 cut(s) 12
BbvI GCAGC 3 cut(s) 192, 239, 570
BccI CCATC 1 cut(s) 370
BceAI ACGGC 1 cut(s) 285
BciT130I CCWGG 1 cut(s) 396
BcuI ACTAGT 1 cut(s) 809
BfaI CTAG 2 cut(s) 629, 810
BfoI RGCGCY 2 cut(s) 94, 100
BisI GCNGC 5 cut(s) 181, 184, 253, 581, 584
BlsI GCNGC 5 cut(s) 182, 185, 254, 582, 585
Bme1390I CCNGG 1 cut(s) 396
BmiI GGNNCC 1 cut(s) 359
BmrFI CCNGG 1 cut(s) 396
BmrI ACTGGG 2 cut(s) 130, 378
BmuI ACTGGG 2 cut(s) 130, 378
BpiI GAAGAC 1 cut(s) 412
BpmI CTGGAG 1 cut(s) 842
Bpu10I CCTNAGC 1 cut(s) 768
Bpu14I TTCGAA 2 cut(s) 86, 204
BsaBI GATNNNNATC 1 cut(s) 511
BsaHI GRCGYC 1 cut(s) 227
BsaJI CCNNGG 1 cut(s) 301
BsaWI WCCGGW 1 cut(s) 570
Bsc4I CCNNNNNNNGG 4 cut(s) 307, 368, 395, 536
Bse1I ACTGG 3 cut(s) 43, 136, 373
Bse8I GATNNNNATC 1 cut(s) 511
BseAI TCCGGA 1 cut(s) 570
BseBI CCWGG 1 cut(s) 396
BseDI CCNNGG 1 cut(s) 301
BseGI GGATG 3 cut(s) 77, 131, 604
BseJI GATNNNNATC 1 cut(s) 511
BseLI CCNNNNNNNGG 4 cut(s) 307, 368, 395, 536
BseMII CTCAG 2 cut(s) 230, 759
BseNI ACTGG 3 cut(s) 43, 136, 373
BseRI GAGGAG 3 cut(s) 283, 503, 506
BseXI GCAGC 3 cut(s) 192, 239, 570
BshFI GGCC 1 cut(s) 446
BsiHKAI GWGCWC 1 cut(s) 12
BsiSI CCGG 1 cut(s) 571
BslFI GGGAC 1 cut(s) 647
BslI CCNNNNNNNGG 4 cut(s) 307, 368, 395, 536
BsmFI GGGAC 1 cut(s) 647
BsnI GGCC 1 cut(s) 446
Bsp119I TTCGAA 2 cut(s) 86, 204
Bsp1286I GDGCHC 1 cut(s) 12
Bsp13I TCCGGA 1 cut(s) 570
Bsp143I GATC 3 cut(s) 391, 506, 885
BspACI CCGC 5 cut(s) 5, 70, 178, 184, 581
BspANI GGCC 1 cut(s) 446
BspCNI CTCAG 2 cut(s) 231, 760
BspEI TCCGGA 1 cut(s) 570
BspHI TCATGA 1 cut(s) 702
BspLI GGNNCC 1 cut(s) 359
BspPI GGATC 2 cut(s) 386, 501
BspT104I TTCGAA 2 cut(s) 86, 204
BsrI ACTGG 3 cut(s) 43, 136, 373
BssECI CCNNGG 1 cut(s) 301
BssMI GATC 3 cut(s) 391, 506, 885
BssNI GRCGYC 1 cut(s) 227
Bst2UI CCWGG 1 cut(s) 396
Bst4CI ACNGT 2 cut(s) 275, 912
Bst6I CTCTTC 3 cut(s) 873, 885, 924
BstACI GRCGYC 1 cut(s) 227
BstBI TTCGAA 2 cut(s) 86, 204
BstC8I GCNNGC 2 cut(s) 95, 682
BstDEI CTNAG 3 cut(s) 239, 735, 768
BstDSI CCRYGG 1 cut(s) 301
BstENI CCTNNNNNAGG 1 cut(s) 393
BstF5I GGATG 3 cut(s) 77, 131, 604
BstH2I RGCGCY 2 cut(s) 94, 100
BstHHI GCGC 2 cut(s) 93, 99
BstKTI GATC 3 cut(s) 394, 509, 888
BstMBI GATC 3 cut(s) 391, 506, 885
BstMWI GCNNNNNNNGC 1 cut(s) 180
BstNI CCWGG 1 cut(s) 396
BstNSI RCATGY 1 cut(s) 26
BstSCI CCNGG 1 cut(s) 394
BstV1I GCAGC 3 cut(s) 192, 239, 570
BstV2I GAAGAC 1 cut(s) 412
BstX2I RGATCY 1 cut(s) 506
BstYI RGATCY 1 cut(s) 506
BsuRI GGCC 1 cut(s) 446
BtgI CCRYGG 1 cut(s) 301
BtsCI GGATG 3 cut(s) 77, 131, 604
BtsIMutI CAGTG 1 cut(s) 50
Cac8I GCNNGC 2 cut(s) 95, 682
CciI TCATGA 1 cut(s) 702
CfoI GCGC 2 cut(s) 93, 99
Csp6I GTAC 2 cut(s) 139, 813
CviAII CATG 5 cut(s) 23, 297, 703, 729, 782
CviQI GTAC 2 cut(s) 139, 813
DdeI CTNAG 3 cut(s) 239, 735, 768
DpnI GATC 3 cut(s) 393, 508, 887
DpnII GATC 3 cut(s) 391, 506, 885
DraI TTTAAA 1 cut(s) 325
EaeI YGGCCR 1 cut(s) 444
Eam1104I CTCTTC 3 cut(s) 873, 885, 924
EarI CTCTTC 3 cut(s) 873, 885, 924
EciI GGCGGA 1 cut(s) 20
Eco47III AGCGCT 1 cut(s) 92
EcoNI CCTNNNNNAGG 1 cut(s) 393
EcoRI GAATTC 1 cut(s) 566
EcoRII CCWGG 1 cut(s) 394
FaeI CATG 5 cut(s) 26, 300, 706, 732, 785
FaqI GGGAC 1 cut(s) 647
FatI CATG 5 cut(s) 22, 296, 702, 728, 781
FauNDI CATATG 1 cut(s) 900
FblI GTMKAC 1 cut(s) 937
Fnu4HI GCNGC 5 cut(s) 181, 184, 253, 581, 584
FokI GGATG 3 cut(s) 64, 118, 611
Fsp4HI GCNGC 5 cut(s) 181, 184, 253, 581, 584
FspBI CTAG 2 cut(s) 629, 810
GlaI GCGC 2 cut(s) 92, 98
GluI GCNGC 5 cut(s) 181, 184, 253, 581, 584
GsuI CTGGAG 1 cut(s) 842
HaeII RGCGCY 2 cut(s) 94, 100
HaeIII GGCC 1 cut(s) 446
HapII CCGG 1 cut(s) 571
HhaI GCGC 2 cut(s) 93, 99
Hin1I GRCGYC 1 cut(s) 227
Hin1II CATG 5 cut(s) 26, 300, 706, 732, 785
Hin6I GCGC 2 cut(s) 91, 97
HinP1I GCGC 2 cut(s) 91, 97
HincII GTYRAC 2 cut(s) 214, 787
HindII GTYRAC 2 cut(s) 214, 787
HinfI GANTC 7 cut(s) 191, 206, 463, 546, 553, 895, 934
HpaII CCGG 1 cut(s) 571
HphI GGTGA 1 cut(s) 862
Hpy166II GTNNAC 3 cut(s) 214, 787, 938
Hpy188I TCNGA 3 cut(s) 240, 623, 841
Hpy188III TCNNGA 4 cut(s) 550, 571, 703, 821
Hpy8I GTNNAC 3 cut(s) 214, 787, 938
Hpy99I CGWCG 4 cut(s) 229, 232, 235, 455
HpyAV CCTTC 1 cut(s) 208
HpyCH4III ACNGT 2 cut(s) 275, 912
HpyCH4IV ACGT 1 cut(s) 227
HpyCH4V TGCA 2 cut(s) 220, 317
HpyF10VI GCNNNNNNNGC 1 cut(s) 180
HpyF3I CTNAG 3 cut(s) 239, 735, 768
HpySE526I ACGT 1 cut(s) 227
Hsp92I GRCGYC 1 cut(s) 227
Hsp92II CATG 5 cut(s) 26, 300, 706, 732, 785
HspAI GCGC 2 cut(s) 91, 97
Kpn2I TCCGGA 1 cut(s) 570
Kzo9I GATC 3 cut(s) 391, 506, 885
LmnI GCTCC 1 cut(s) 7
Lsp1109I GCAGC 3 cut(s) 192, 239, 570
MaeI CTAG 2 cut(s) 629, 810
MaeII ACGT 1 cut(s) 227
MaeIII GTNAC 1 cut(s) 722
MalI GATC 3 cut(s) 393, 508, 887
MboI GATC 3 cut(s) 391, 506, 885
MflI RGATCY 1 cut(s) 506
MhlI GDGCHC 1 cut(s) 12
MluCI AATT 2 cut(s) 482, 566
MlyI GAGTC 1 cut(s) 943
MmeI TCCRAC 1 cut(s) 554
MroI TCCGGA 1 cut(s) 570
MroXI GAANNNNTTC 2 cut(s) 38, 894
MseI TTAA 5 cut(s) 65, 324, 402, 744, 749
MspA1I CMGCKG 1 cut(s) 583
MspI CCGG 1 cut(s) 571
MspR9I CCNGG 1 cut(s) 396
MvaI CCWGG 1 cut(s) 396
MwoI GCNNNNNNNGC 1 cut(s) 180
NdeI CATATG 1 cut(s) 900
NdeII GATC 3 cut(s) 391, 506, 885
NlaIII CATG 5 cut(s) 26, 300, 706, 732, 785
NlaIV GGNNCC 1 cut(s) 359
NmeAIII GCCGAG 1 cut(s) 422
NspI RCATGY 1 cut(s) 26
NspV TTCGAA 2 cut(s) 86, 204
PagI TCATGA 1 cut(s) 702
PciI ACATGT 1 cut(s) 22
PdmI GAANNNNTTC 2 cut(s) 38, 894
PfeI GAWTC 6 cut(s) 191, 206, 463, 546, 553, 895
PflFI GACNNNGTC 1 cut(s) 229
PflMI CCANNNNNTGG 2 cut(s) 368, 536
PkrI GCNGC 5 cut(s) 182, 185, 254, 582, 585
PleI GAGTC 1 cut(s) 942
PpsI GAGTC 1 cut(s) 942
PscI ACATGT 1 cut(s) 22
PsiI TTATAA 1 cut(s) 873
Psp6I CCWGG 1 cut(s) 394
PspGI CCWGG 1 cut(s) 394
PspN4I GGNNCC 1 cut(s) 359
PsuI RGATCY 1 cut(s) 506
PsyI GACNNNGTC 1 cut(s) 229
RsaI GTAC 2 cut(s) 140, 814
RsaNI GTAC 2 cut(s) 139, 813
SaqAI TTAA 5 cut(s) 65, 324, 402, 744, 749
SatI GCNGC 5 cut(s) 181, 184, 253, 581, 584
Sau3AI GATC 3 cut(s) 391, 506, 885
SchI GAGTC 1 cut(s) 943
ScrFI CCNGG 1 cut(s) 396
SduI GDGCHC 1 cut(s) 12
SetI ASST 7 cut(s) 19, 230, 350, 391, 400, 646, 741
SfuI TTCGAA 2 cut(s) 86, 204
SmlI CTYRAG 1 cut(s) 947
SmoI CTYRAG 1 cut(s) 947
SpeI ACTAGT 1 cut(s) 809
Sse9I AATT 2 cut(s) 482, 566
SsiI CCGC 5 cut(s) 5, 70, 178, 184, 581
SspMI CTAG 2 cut(s) 629, 810
StyD4I CCNGG 1 cut(s) 394
TaaI ACNGT 2 cut(s) 275, 912
TaiI ACGT 1 cut(s) 230
TaqI TCGA 5 cut(s) 86, 204, 523, 594, 888
TaqII GACCGA 1 cut(s) 199
TasI AATT 2 cut(s) 482, 566
TatI WGTACW 1 cut(s) 812
TauI GCSGC 2 cut(s) 186, 583
TfiI GAWTC 6 cut(s) 191, 206, 463, 546, 553, 895
Tru1I TTAA 5 cut(s) 65, 324, 402, 744, 749
Tru9I TTAA 5 cut(s) 65, 324, 402, 744, 749
TscAI CASTG 1 cut(s) 50
TseI GCWGC 3 cut(s) 180, 252, 583
TspDTI ATGAA 5 cut(s) 91, 274, 887, 891, 942
TspRI CASTG 1 cut(s) 50
Tth111I GACNNNGTC 1 cut(s) 229
Van91I CCANNNNNTGG 2 cut(s) 368, 536
XagI CCTNNNNNAGG 1 cut(s) 393
XapI RAATTY 2 cut(s) 482, 566
XceI RCATGY 1 cut(s) 26
XcmI CCANNNNNNNNNTGG 1 cut(s) 422
XmiI GTMKAC 1 cut(s) 937
XmnI GAANNNNTTC 2 cut(s) 38, 894
XspI CTAG 2 cut(s) 629, 810
ZraI GACGTC 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.