Rorug02G0147700

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000082
Physical Location & Seq
Reverse (-)
12958701 .. 12961349
2649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0147700.1

Sequence Viewer

Length: 1422 bp
ATGGATGAGATCTGGGAGCGAGCCATTGAGACAGCGCTGGACGGCGAGACAGACCACGCTTCGGCTCGAAGCCTGACTCTAGATGGTGCGGTGAAGTGCGTCCAGGGCCGGCTACCCCCTCCGGGTCTTCTAGAGAAGTTCCAGAACCTTCAGCATCTCTCGATTGCAAACGTGGGCGTTTCGTCCCTGGAGCAGTTCCCGAGGCTCCGAAGCCTCCACTCCCTGATTCTCTCCGACAATCGAATCGCAGGAGGGCTTGAATTTCTGGTAGAGGCCGGGCTGGACTCGCTGAGAGACCTGGACCTGTCCAACAACCGGATTCAGTATATTGAAGATCTAGCCCCGCTGGCGCAGCTGAAGCTGACCTCGCTTGATCTGTATGAGTGTCCGGTGACGCGTGTCAAGGATTACCGATCTAGGGTTTTCGGGTTGATTAGGTCGTTGAAGTATTTGGATAAGATGGATGCGGAGGAGAACGAGCCGCCGGAGAGCGAGGATGAGGAGGAGGAGGATGAGGAAGATGAGGATGACCCTGGGAGCGGGGAAATCGATGGTGAGGATCGGCCTTCTAGGATGATGAGTAATGGGCACACTGAGGCGGCTGAAGGGGTTGTGGATGTTGATGAGGATGATGAGAGTGACGCCGATGAGGAGGAGACTTTGACTGCCACTAGGGTGAATGGACAGAATCACCCGACGGAGAACGGTTTCCGGGTTGCTCCCGTGGCCGGAGAGAATGGAGGAGAGGATGAGGAGGAGGAGGATGATGATGAGAACTACTCTGCAGAGGAGATAGACGAGGAGGATAGTGAGGATGATGAGGTGGTGGAGGTGCATGAGATTGAGGATAGTGATGATGAGGAAGATGGGGTTGAGTATGATGAGGAGGATGATGACGATGACGACGACGACGATGATGAGGAGGAGGAGGAAGTGGACAATGATGAGGGGGATTTGGCTGAGCCAGAGAGTACAGGAAGGTTAACAAGCACAGAAGGAGAGATTGATGGCCATGAGCAAGGAGAGGATGATGGAGATGAAGATGATAATGGAGAGACCGGGGAGGAGGAGCTGGGTGTTGAAGAAGAGGGACCGCTTGAAGTTGAAGTTGAAGATGAAGATGGCGAAGAAGAGGAGGAAGACTATGGCGGAGGTTACTTAGTGCAACCAGTGGCACAGGCTGAGGAAGAAGATGCTGGCGTCAGTGACATGGACGCAGAAAATGAAGAAGGGGATGGTGAAGAAGATGAGGAGGAAGTCGAAGAGGATGATGACGATGAAGTTCAGGTTCTGCCTCCCTCGTCTTCTTCACAGATGAAGAGAAAAAGAGATGAAGCTGCAGATTCAGATGACAATGGTGAGGACGACGAGGAAGATGATGATGTGGTTGAGTACAGCAAGTCTTCGAAGAAGCACCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

473

Amino Acids

52.62

Weight (kDa)

4.05

Isoelectric Point (pI)

67.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_9 PF14580 56 - 154 2.7e-12 Leucine-rich repeat
LRR_4 PF12799 71 - 114 1e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 540
AccII CGCG 1 cut(s) 397
AciI CCGC 8 cut(s) 89, 344, 467, 482, 540, 599, 1094, 1149
AclWI GGATC 1 cut(s) 567
AcoI YGGCCR 2 cut(s) 726, 1009
AcsI RAATTY 1 cut(s) 260
AcuI CTGAAG 3 cut(s) 134, 377, 624
AcyI GRCGYC 2 cut(s) 642, 1200
AfaI GTAC 2 cut(s) 973, 1394
AfeI AGCGCT 1 cut(s) 36
AfiI CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 728
AflIII ACRYGT 1 cut(s) 395
AgsI TTSAA 7 cut(s) 260, 332, 445, 1082, 1100, 1106, 1112
AjnI CCWGG 4 cut(s) 102, 186, 297, 532
AleI CACNNNNGTG 1 cut(s) 674
AluBI AGCT 4 cut(s) 355, 361, 1072, 1337
AluI AGCT 4 cut(s) 355, 361, 1072, 1337
Alw26I GTCTC 5 cut(s) 23, 41, 288, 650, 1049
AlwI GGATC 1 cut(s) 567
AlwNI CAGNNNCTG 1 cut(s) 1291
Ama87I CYCGRG 1 cut(s) 199
Aor51HI AGCGCT 1 cut(s) 36
AoxI GGCC 5 cut(s) 106, 273, 563, 726, 1009
ApeKI GCWGC 2 cut(s) 352, 1337
ApoI RAATTY 1 cut(s) 260
Asp700I GAANNNNTTC 1 cut(s) 707
AspLEI GCGC 2 cut(s) 37, 352
AspS9I GGNCC 3 cut(s) 106, 301, 1091
AsuC2I CCSGG 4 cut(s) 123, 277, 713, 1060
AsuHPI GGTGA 7 cut(s) 103, 403, 566, 683, 688, 1250, 1370
AsuII TTCGAA 1 cut(s) 1406
AvaI CYCGRG 1 cut(s) 199
AvaII GGWCC 2 cut(s) 301, 1091
BaeGI GKGCMC 1 cut(s) 591
BalI TGGCCA 1 cut(s) 1011
BbsI GAAGAC 4 cut(s) 119, 1146, 1296, 1395
BbvCI CCTCAGC 1 cut(s) 1182
BbvI GCAGC 2 cut(s) 364, 1324
BccI CCATC 8 cut(s) 77, 454, 545, 860, 1001, 1025, 1115, 1229
BceAI ACGGC 1 cut(s) 58
BciT130I CCWGG 4 cut(s) 104, 188, 299, 534
BcnI CCSGG 4 cut(s) 123, 277, 713, 1060
BcoDI GTCTC 5 cut(s) 23, 41, 288, 650, 1049
BfaI CTAG 6 cut(s) 80, 131, 338, 417, 570, 672
BfmI CTRYAG 2 cut(s) 783, 1338
BfoI RGCGCY 1 cut(s) 38
BglI GCCNNNNNGGC 1 cut(s) 347
BglII AGATCT 2 cut(s) 9, 334
BisI GCNGC 4 cut(s) 353, 482, 600, 1338
BlpI GCTNAGC 1 cut(s) 960
BlsI GCNGC 4 cut(s) 354, 483, 601, 1339
Bme1390I CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 713, 1060
Bme18I GGWCC 2 cut(s) 301, 1091
BmeT110I CYCGRG 1 cut(s) 199
BmgT120I GGNCC 3 cut(s) 106, 301, 1091
BmiI GGNNCC 2 cut(s) 206, 1092
BmrFI CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 713, 1060
BmsI GCATC 3 cut(s) 163, 454, 1183
BoxI GACNNNNGTC 1 cut(s) 398
BpiI GAAGAC 4 cut(s) 119, 1146, 1296, 1395
BplI GAGNNNNNCTC 2 cut(s) 764, 796
BpmI CTGGAG 1 cut(s) 209
Bpu10I CCTNAGC 1 cut(s) 1182
Bpu1102I GCTNAGC 1 cut(s) 960
Bpu14I TTCGAA 1 cut(s) 1406
BpuMI CCSGG 4 cut(s) 123, 277, 713, 1060
Bsa29I ATCGAT 1 cut(s) 549
BsaHI GRCGYC 2 cut(s) 642, 1200
BsaI GGTCTC 2 cut(s) 288, 1049
BsaJI CCNNGG 7 cut(s) 103, 186, 200, 532, 533, 723, 1059
BsaWI WCCGGW 2 cut(s) 315, 388
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 728
Bse118I RCCGGY 1 cut(s) 108
Bse1I ACTGG 1 cut(s) 1169
BseBI CCWGG 4 cut(s) 104, 188, 299, 534
BseCI ATCGAT 1 cut(s) 549
BseDI CCNNGG 7 cut(s) 103, 186, 200, 532, 533, 723, 1059
BseLI CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 728
BseMII CTCAG 4 cut(s) 281, 585, 951, 1173
BseNI ACTGG 1 cut(s) 1169
BseSI GKGCMC 1 cut(s) 591
BseXI GCAGC 2 cut(s) 364, 1324
BseYI CCCAGC 1 cut(s) 1072
Bsh1236I CGCG 1 cut(s) 397
BshFI GGCC 5 cut(s) 108, 275, 565, 728, 1011
BshVI ATCGAT 1 cut(s) 549
BsiHKCI CYCGRG 1 cut(s) 199
BsiSI CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 712, 729, 1059
BslFI GGGAC 2 cut(s) 169, 1104
BslI CCNNNNNNNGG 6 cut(s) 61, 122, 315, 418, 539, 728
BsmAI GTCTC 5 cut(s) 23, 41, 288, 650, 1049
BsmFI GGGAC 2 cut(s) 169, 1104
BsnI GGCC 5 cut(s) 108, 275, 565, 728, 1011
Bso31I GGTCTC 2 cut(s) 288, 1049
BsoBI CYCGRG 1 cut(s) 199
Bsp119I TTCGAA 1 cut(s) 1406
Bsp1286I GDGCHC 1 cut(s) 591
Bsp143I GATC 5 cut(s) 9, 334, 373, 413, 559
Bsp1720I GCTNAGC 1 cut(s) 960
BspACI CCGC 8 cut(s) 89, 344, 467, 482, 540, 599, 1094, 1149
BspANI GGCC 5 cut(s) 108, 275, 565, 728, 1011
BspCNI CTCAG 4 cut(s) 282, 586, 952, 1174
BspDI ATCGAT 1 cut(s) 549
BspFNI CGCG 1 cut(s) 397
BspLI GGNNCC 2 cut(s) 206, 1092
BspMAI CTGCAG 2 cut(s) 787, 1342
BspPI GGATC 1 cut(s) 567
BspT104I TTCGAA 1 cut(s) 1406
BspTNI GGTCTC 2 cut(s) 288, 1049
BsrBI CCGCTC 1 cut(s) 540
BsrFI RCCGGY 1 cut(s) 108
BsrI ACTGG 1 cut(s) 1169
BssAI RCCGGY 1 cut(s) 108
BssECI CCNNGG 7 cut(s) 103, 186, 200, 532, 533, 723, 1059
BssMI GATC 5 cut(s) 9, 334, 373, 413, 559
BssNI GRCGYC 2 cut(s) 642, 1200
Bst2UI CCWGG 4 cut(s) 104, 188, 299, 534
Bst4CI ACNGT 2 cut(s) 707, 1418
Bst6I CTCTTC 4 cut(s) 1080, 1125, 1257, 1313
BstACI GRCGYC 2 cut(s) 642, 1200
BstBI TTCGAA 1 cut(s) 1406
BstC8I GCNNGC 4 cut(s) 21, 110, 348, 1198
BstDEI CTNAG 5 cut(s) 290, 594, 960, 1159, 1182
BstDSI CCRYGG 1 cut(s) 723
BstFNI CGCG 1 cut(s) 397
BstH2I RGCGCY 1 cut(s) 38
BstHHI GCGC 2 cut(s) 37, 352
BstKTI GATC 5 cut(s) 12, 337, 376, 416, 562
BstMAI GTCTC 5 cut(s) 23, 41, 288, 650, 1049
BstMBI GATC 5 cut(s) 9, 334, 373, 413, 559
BstMWI GCNNNNNNNGC 7 cut(s) 105, 286, 347, 352, 358, 367, 725
BstNI CCWGG 4 cut(s) 104, 188, 299, 534
BstPAI GACNNNNGTC 1 cut(s) 398
BstSCI CCNGG 8 cut(s) 102, 121, 186, 275, 297, 532, 711, 1058
BstSFI CTRYAG 2 cut(s) 783, 1338
BstSLI GKGCMC 1 cut(s) 591
BstUI CGCG 1 cut(s) 397
BstV1I GCAGC 2 cut(s) 364, 1324
BstV2I GAAGAC 4 cut(s) 119, 1146, 1296, 1395
BstX2I RGATCY 2 cut(s) 9, 334
BstYI RGATCY 2 cut(s) 9, 334
Bsu15I ATCGAT 1 cut(s) 549
BsuRI GGCC 5 cut(s) 108, 275, 565, 728, 1011
BsuTUI ATCGAT 1 cut(s) 549
BtgI CCRYGG 1 cut(s) 723
BtsIMutI CAGTG 3 cut(s) 591, 1176, 1210
Cac8I GCNNGC 4 cut(s) 21, 110, 348, 1198
CaiI CAGNNNCTG 1 cut(s) 1291
CfoI GCGC 2 cut(s) 37, 352
Cfr10I RCCGGY 1 cut(s) 108
Cfr13I GGNCC 3 cut(s) 106, 301, 1091
ClaI ATCGAT 1 cut(s) 549
CseI GACGC 5 cut(s) 88, 403, 650, 1189, 1223
Csp6I GTAC 2 cut(s) 972, 1393
CviAII CATG 3 cut(s) 836, 1013, 1210
CviQI GTAC 2 cut(s) 972, 1393
DdeI CTNAG 5 cut(s) 290, 594, 960, 1159, 1182
DpnI GATC 5 cut(s) 11, 336, 375, 415, 561
DpnII GATC 5 cut(s) 9, 334, 373, 413, 559
EaeI YGGCCR 2 cut(s) 726, 1009
Eam1104I CTCTTC 4 cut(s) 1080, 1125, 1257, 1313
EarI CTCTTC 4 cut(s) 1080, 1125, 1257, 1313
EciI GGCGGA 1 cut(s) 1164
Eco31I GGTCTC 2 cut(s) 288, 1049
Eco47I GGWCC 2 cut(s) 301, 1091
Eco47III AGCGCT 1 cut(s) 36
Eco57I CTGAAG 3 cut(s) 134, 377, 624
Eco88I CYCGRG 1 cut(s) 199
EcoRII CCWGG 4 cut(s) 102, 186, 297, 532
FaeI CATG 3 cut(s) 839, 1016, 1213
FaiI YATR 7 cut(s) 327, 381, 837, 879, 1014, 1146, 1211
FaqI GGGAC 2 cut(s) 169, 1104
FatI CATG 3 cut(s) 835, 1012, 1209
FauI CCCGC 2 cut(s) 351, 533
Fnu4HI GCNGC 4 cut(s) 353, 482, 600, 1338
Fsp4HI GCNGC 4 cut(s) 353, 482, 600, 1338
FspBI CTAG 6 cut(s) 80, 131, 338, 417, 570, 672
GlaI GCGC 2 cut(s) 36, 351
GluI GCNGC 4 cut(s) 353, 482, 600, 1338
GsaI CCCAGC 1 cut(s) 1076
GsuI CTGGAG 1 cut(s) 209
HaeII RGCGCY 1 cut(s) 38
HaeIII GGCC 5 cut(s) 108, 275, 565, 728, 1011
HapII CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 712, 729, 1059
HgaI GACGC 5 cut(s) 88, 403, 650, 1189, 1223
HhaI GCGC 2 cut(s) 37, 352
Hin1I GRCGYC 2 cut(s) 642, 1200
Hin1II CATG 3 cut(s) 839, 1016, 1213
Hin6I GCGC 2 cut(s) 35, 350
HinP1I GCGC 2 cut(s) 35, 350
HincII GTYRAC 1 cut(s) 984
HindII GTYRAC 1 cut(s) 984
HinfI GANTC 7 cut(s) 76, 226, 243, 284, 319, 688, 1343
HpaI GTTAAC 1 cut(s) 984
HpaII CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 712, 729, 1059
HphI GGTGA 7 cut(s) 103, 403, 566, 683, 688, 1250, 1370
Hpy166II GTNNAC 2 cut(s) 937, 984
Hpy188I TCNGA 3 cut(s) 209, 235, 1348
Hpy188III TCNNGA 5 cut(s) 80, 131, 142, 160, 199
Hpy8I GTNNAC 2 cut(s) 937, 984
Hpy99I CGWCG 5 cut(s) 700, 908, 911, 914, 1370
HpyAV CCTTC 6 cut(s) 158, 576, 599, 972, 989, 1223
HpyCH4III ACNGT 2 cut(s) 707, 1418
HpyCH4IV ACGT 1 cut(s) 171
HpyCH4V TGCA 5 cut(s) 167, 785, 835, 1165, 1340
HpyF10VI GCNNNNNNNGC 7 cut(s) 105, 286, 347, 352, 358, 367, 725
HpyF3I CTNAG 5 cut(s) 290, 594, 960, 1159, 1182
HpySE526I ACGT 1 cut(s) 171
Hsp92I GRCGYC 2 cut(s) 642, 1200
Hsp92II CATG 3 cut(s) 839, 1016, 1213
HspAI GCGC 2 cut(s) 35, 350
KroI GCCGGC 1 cut(s) 108
KroNI GCCGGC 1 cut(s) 110
KspAI GTTAAC 1 cut(s) 984
Kzo9I GATC 5 cut(s) 9, 334, 373, 413, 559
LmnI GCTCC 6 cut(s) 16, 190, 210, 537, 724, 1069
Lsp1109I GCAGC 2 cut(s) 364, 1324
LweI GCATC 3 cut(s) 163, 454, 1183
MaeI CTAG 6 cut(s) 80, 131, 338, 417, 570, 672
MaeII ACGT 1 cut(s) 171
MaeIII GTNAC 4 cut(s) 391, 638, 1154, 1205
MalI GATC 5 cut(s) 11, 336, 375, 415, 561
MbiI CCGCTC 1 cut(s) 540
MboI GATC 5 cut(s) 9, 334, 373, 413, 559
MflI RGATCY 2 cut(s) 9, 334
MhlI GDGCHC 1 cut(s) 591
MlsI TGGCCA 1 cut(s) 1011
MluCI AATT 1 cut(s) 260
MluI ACGCGT 1 cut(s) 395
MluNI TGGCCA 1 cut(s) 1011
MlyI GAGTC 2 cut(s) 70, 278
MmeI TCCRAC 2 cut(s) 258, 333
Mox20I TGGCCA 1 cut(s) 1011
MroNI GCCGGC 1 cut(s) 108
MroXI GAANNNNTTC 1 cut(s) 707
MscI TGGCCA 1 cut(s) 1011
MseI TTAA 1 cut(s) 983
MslI CAYNNNNRTG 1 cut(s) 674
Msp20I TGGCCA 1 cut(s) 1011
MspA1I CMGCKG 2 cut(s) 346, 355
MspI CCGG 9 cut(s) 109, 122, 276, 316, 389, 485, 712, 729, 1059
MspR9I CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 713, 1060
MvaI CCWGG 4 cut(s) 104, 188, 299, 534
MvnI CGCG 1 cut(s) 397
MwoI GCNNNNNNNGC 7 cut(s) 105, 286, 347, 352, 358, 367, 725
NaeI GCCGGC 1 cut(s) 110
NciI CCSGG 4 cut(s) 123, 277, 713, 1060
NdeII GATC 5 cut(s) 9, 334, 373, 413, 559
NgoMIV GCCGGC 1 cut(s) 108
NlaIII CATG 3 cut(s) 839, 1016, 1213
NlaIV GGNNCC 2 cut(s) 206, 1092
NmuCI GTSAC 3 cut(s) 391, 638, 1205
NspV TTCGAA 1 cut(s) 1406
OliI CACNNNNGTG 1 cut(s) 674
PasI CCCWGGG 1 cut(s) 533
PcsI WCGNNNNNNNCGW 2 cut(s) 903, 909
PdiI GCCGGC 1 cut(s) 110
PdmI GAANNNNTTC 1 cut(s) 707
PfeI GAWTC 5 cut(s) 226, 243, 319, 688, 1343
PkrI GCNGC 4 cut(s) 354, 483, 601, 1339
PleI GAGTC 2 cut(s) 70, 278
PpsI GAGTC 2 cut(s) 70, 278
PshAI GACNNNNGTC 1 cut(s) 398
Psp6I CCWGG 4 cut(s) 102, 186, 297, 532
PspFI CCCAGC 1 cut(s) 1072
PspGI CCWGG 4 cut(s) 102, 186, 297, 532
PspN4I GGNNCC 2 cut(s) 206, 1092
PspPI GGNCC 3 cut(s) 106, 301, 1091
PstI CTGCAG 2 cut(s) 787, 1342
PstNI CAGNNNCTG 1 cut(s) 1291
PsuI RGATCY 2 cut(s) 9, 334
PvuII CAGCTG 1 cut(s) 355
RsaI GTAC 2 cut(s) 973, 1394
RsaNI GTAC 2 cut(s) 972, 1393
RseI CAYNNNNRTG 1 cut(s) 674
SaqAI TTAA 1 cut(s) 983
SatI GCNGC 4 cut(s) 353, 482, 600, 1338
Sau3AI GATC 5 cut(s) 9, 334, 373, 413, 559
Sau96I GGNCC 3 cut(s) 106, 301, 1091
SchI GAGTC 2 cut(s) 70, 278
ScrFI CCNGG 8 cut(s) 104, 123, 188, 277, 299, 534, 713, 1060
SduI GDGCHC 1 cut(s) 591
SfaNI GCATC 3 cut(s) 163, 454, 1183
SfcI CTRYAG 2 cut(s) 783, 1338
SfuI TTCGAA 1 cut(s) 1406
SinI GGWCC 2 cut(s) 301, 1091
SmiMI CAYNNNNRTG 1 cut(s) 674
Sse9I AATT 1 cut(s) 260
SsiI CCGC 8 cut(s) 89, 344, 467, 482, 540, 599, 1094, 1149
SspMI CTAG 6 cut(s) 80, 131, 338, 417, 570, 672
StyD4I CCNGG 8 cut(s) 102, 121, 186, 275, 297, 532, 711, 1058
TaaI ACNGT 2 cut(s) 707, 1418
TaiI ACGT 1 cut(s) 174
TaqI TCGA 6 cut(s) 67, 161, 241, 549, 1260, 1406
TasI AATT 1 cut(s) 260
TatI WGTACW 2 cut(s) 971, 1392
TauI GCSGC 2 cut(s) 484, 602
TfiI GAWTC 5 cut(s) 226, 243, 319, 688, 1343
Tru1I TTAA 1 cut(s) 983
Tru9I TTAA 1 cut(s) 983
TscAI CASTG 3 cut(s) 598, 1176, 1210
TseFI GTSAC 3 cut(s) 391, 638, 1205
TseI GCWGC 2 cut(s) 352, 1337
Tsp45I GTSAC 3 cut(s) 391, 638, 1205
TspDTI ATGAA 6 cut(s) 1053, 1131, 1239, 1293, 1331, 1347
TspGWI ACGGA 1 cut(s) 713
TspRI CASTG 3 cut(s) 598, 1176, 1210
VpaK11BI GGWCC 2 cut(s) 301, 1091
XapI RAATTY 1 cut(s) 260
XbaI TCTAGA 2 cut(s) 79, 130
XmnI GAANNNNTTC 1 cut(s) 707
XspI CTAG 6 cut(s) 80, 131, 338, 417, 570, 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.