Rw0G010830

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00466
OG0000082
Physical Location & Seq
Forward (+)
2158 .. 3316
1159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G010830.1

Sequence Viewer

Length: 1122 bp
ATGGCAGAAACAGAAGAGCTACCGGAAGAGATTATAGTGAATATCTTTACTTGGTTACCCCTCAAGTCCTTGATCCGATTCACCTCCGTTTCGAAACGTCTGCGTTCCATTATATTGTCCGATCCCAAATTCGCCCAATCCCAACTTAAAGCAGCTCGTCAGCGGAAAACCCTCAACCGCAGACTCCTCGTCTCCACCAACGCCTCTCGACTCGAGCTCGACTCCCTAGACTTGGAAACGCCGTCGTTTGGAGAGCCCTCCTCCGTTAGAAAGCTCAGCTTCCCTTTCCCGCCACGACCGGGCGGTTATGTCACGCTACTGGGCTCCTGCAATGGTCTGGTATTTGTAGCTGTTGATAAAATTCAATTACCCGATCCAGGTTTTCCCTTAGATGAAAGTTGGCTAGCCTATTATGGCGTTGGCTATTTATCTGCCACCGATGACTACAAAGTTTTGGTAGCGTCCTATCGCATTGTTGAATGGGAGATAGAGGTCGAGATGTTCTCATCGTCAACTCACATATGGCAGAGGATTGAATCCCCTCGCCCGCGCATCACTGTTGAACCCGATCTTCAGGGTACTCTTTCGAATGATGCACTTCATTGGCTAAAATACGATGAGGAGGAGGAGCATGAGATAGTTTCTTTTGACTTGGAAGAGGAGGTGTTCCGGAGAATGCCGCTGCCTAATTTCGAACATGATGGTAAGACTTTCTGCAAGCTTGGGGTTTATGGAGGGTGCCTGTGTGTATCGCGTTATCCGGATGGTGCTTTTGACTTTATTGACTTCTGGGTCATGAGAGAATATGGCGTCAGTGGCTCATGGATTATGCTCTTTAGCTTAAAGCCGCCTGAGTTGCCCTTGTATTCCAGAGAATTCTTGGTTGTGGAAAGTTGTACAGTTGCCGCCGATTGGACTGGCGAGGGGTTCAAGTTGATAAGGATTGATCATAAAGAAGACGAGAAGCTTGGGCGGTATATGGTTAAGGGGGTTCGCATTTGTATGGTTGAATACGAAGATAGTCTACTTTGGATTAGTGGTTATCATTCAGGAAAAAGAGATAGAGCAGGTCAAGATACTCGAAACCCATCAGAAGGCCTCAGGAAGCTGAAATGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

373

Amino Acids

42.93

Weight (kDa)

5.33

Isoelectric Point (pI)

49.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 3.9e-08 F-box-like
F-box PF00646 6 - 43 1.2e-09 F-box domain
FBA_3 PF08268 135 - 276 2.3e-08 F-box associated beta propeller domain
FBA_1 PF07734 137 - 302 5.9e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 791
Acc36I ACCTGC 1 cut(s) 1058
AccB1I GGYRCC 1 cut(s) 738
AccI GTMKAC 1 cut(s) 1024
AccII CGCG 2 cut(s) 550, 754
AccIII TCCGGA 2 cut(s) 669, 760
AciI CCGC 9 cut(s) 163, 178, 290, 303, 548, 680, 848, 906, 973
AclWI GGATC 3 cut(s) 67, 116, 368
AcsI RAATTY 3 cut(s) 128, 360, 875
AcuI CTGAAG 1 cut(s) 557
AcyI GRCGYC 1 cut(s) 810
AfaI GTAC 2 cut(s) 580, 898
AfiI CCNNNNNNNGG 6 cut(s) 232, 248, 299, 377, 912, 1094
AgsI TTSAA 6 cut(s) 365, 479, 536, 563, 931, 1010
AhdI GACNNNNNGTC 1 cut(s) 188
AjnI CCWGG 1 cut(s) 376
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 1 cut(s) 196
AlwI GGATC 3 cut(s) 67, 116, 368
Ama87I CYCGRG 1 cut(s) 212
Aor13HI TCCGGA 2 cut(s) 669, 760
AoxI GGCC 1 cut(s) 1096
ApeKI GCWGC 2 cut(s) 152, 682
ApoI RAATTY 3 cut(s) 128, 360, 875
AspLEI GCGC 1 cut(s) 552
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 1 cut(s) 73
AsuII TTCGAA 3 cut(s) 92, 587, 693
AsuNHI GCTAGC 1 cut(s) 403
AvaI CYCGRG 1 cut(s) 212
AxyI CCTNAGG 1 cut(s) 1100
BanI GGYRCC 1 cut(s) 738
BanII GRGCYC 3 cut(s) 219, 258, 326
BarI GAAGNNNNNNTAC 2 cut(s) 1008, 1040
BbsI GAAGAC 1 cut(s) 963
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 2 cut(s) 164, 669
BccI CCATC 3 cut(s) 695, 758, 1096
BceAI ACGGC 1 cut(s) 226
BcgI CGANNNNNNTGC 4 cut(s) 82, 116, 169, 203
BciT130I CCWGG 1 cut(s) 378
BclI TGATCA 1 cut(s) 946
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 1 cut(s) 196
BfaI CTAG 2 cut(s) 227, 404
BfuAI ACCTGC 1 cut(s) 1058
BisI GCNGC 5 cut(s) 153, 680, 683, 848, 906
BlpI GCTNAGC 1 cut(s) 275
BlsI GCNGC 5 cut(s) 154, 681, 684, 849, 907
Bme1390I CCNGG 2 cut(s) 300, 378
BmeRI GACNNNNNGTC 1 cut(s) 188
BmeT110I CYCGRG 1 cut(s) 212
BmiI GGNNCC 2 cut(s) 325, 740
BmrFI CCNGG 2 cut(s) 300, 378
BmrI ACTGGG 1 cut(s) 329
BmsI GCATC 2 cut(s) 561, 583
BmtI GCTAGC 1 cut(s) 407
BmuI ACTGGG 1 cut(s) 329
BpiI GAAGAC 1 cut(s) 963
BplI GAGNNNNNCTC 6 cut(s) 206, 238, 245, 277, 488, 520
Bpu1102I GCTNAGC 1 cut(s) 275
Bpu14I TTCGAA 3 cut(s) 92, 587, 693
BpuEI CTTGAG 1 cut(s) 47
BpuMI CCSGG 1 cut(s) 300
BsaHI GRCGYC 1 cut(s) 810
BsaWI WCCGGW 3 cut(s) 22, 669, 760
Bsc4I CCNNNNNNNGG 6 cut(s) 232, 248, 299, 377, 912, 1094
Bse1I ACTGG 2 cut(s) 324, 922
Bse21I CCTNAGG 1 cut(s) 1100
Bse3DI GCAATG 1 cut(s) 337
BseAI TCCGGA 2 cut(s) 669, 760
BseBI CCWGG 1 cut(s) 378
BseGI GGATG 1 cut(s) 769
BseLI CCNNNNNNNGG 6 cut(s) 232, 248, 299, 377, 912, 1094
BseMI GCAATG 1 cut(s) 337
BseMII CTCAG 3 cut(s) 289, 843, 1114
BseNI ACTGG 2 cut(s) 324, 922
BseRI GAGGAG 6 cut(s) 176, 250, 635, 638, 641, 674
BseXI GCAGC 2 cut(s) 164, 669
Bsh1236I CGCG 2 cut(s) 550, 754
Bsh1285I CGRYCG 1 cut(s) 299
BshFI GGCC 1 cut(s) 1098
BshNI GGYRCC 1 cut(s) 738
BsiEI CGRYCG 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 219
BsiHKCI CYCGRG 1 cut(s) 212
BsiSI CCGG 4 cut(s) 23, 299, 670, 761
BslI CCNNNNNNNGG 6 cut(s) 232, 248, 299, 377, 912, 1094
BsmAI GTCTC 1 cut(s) 196
BsmBI CGTCTC 1 cut(s) 196
BsmI GAATGC 1 cut(s) 681
BsnI GGCC 1 cut(s) 1098
BsoBI CYCGRG 1 cut(s) 212
Bsp119I TTCGAA 3 cut(s) 92, 587, 693
Bsp1286I GDGCHC 3 cut(s) 219, 258, 326
Bsp13I TCCGGA 2 cut(s) 669, 760
Bsp1407I TGTACA 1 cut(s) 896
Bsp143I GATC 5 cut(s) 72, 121, 373, 568, 946
Bsp1720I GCTNAGC 1 cut(s) 275
BspACI CCGC 9 cut(s) 163, 178, 290, 303, 548, 680, 848, 906, 973
BspANI GGCC 1 cut(s) 1098
BspCNI CTCAG 3 cut(s) 288, 844, 1113
BspEI TCCGGA 2 cut(s) 669, 760
BspFNI CGCG 2 cut(s) 550, 754
BspHI TCATGA 1 cut(s) 795
BspLI GGNNCC 2 cut(s) 325, 740
BspMI ACCTGC 1 cut(s) 1058
BspOI GCTAGC 1 cut(s) 407
BspPI GGATC 3 cut(s) 67, 116, 368
BspQI GCTCTTC 1 cut(s) 9
BspT104I TTCGAA 3 cut(s) 92, 587, 693
BspT107I GGYRCC 1 cut(s) 738
BsrDI GCAATG 1 cut(s) 337
BsrGI TGTACA 1 cut(s) 896
BsrI ACTGG 2 cut(s) 324, 922
BssMI GATC 5 cut(s) 72, 121, 373, 568, 946
BssNI GRCGYC 1 cut(s) 810
Bst2UI CCWGG 1 cut(s) 378
Bst4CI ACNGT 2 cut(s) 559, 901
Bst6I CTCTTC 3 cut(s) 9, 21, 651
BstACI GRCGYC 1 cut(s) 810
BstAUI TGTACA 1 cut(s) 896
BstBI TTCGAA 3 cut(s) 92, 587, 693
BstC8I GCNNGC 3 cut(s) 405, 548, 719
BstDEI CTNAG 4 cut(s) 275, 388, 852, 1100
BstEII GGTNACC 1 cut(s) 54
BstF5I GGATG 1 cut(s) 769
BstFNI CGCG 2 cut(s) 550, 754
BstHHI GCGC 1 cut(s) 552
BstKTI GATC 5 cut(s) 75, 124, 376, 571, 949
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 5 cut(s) 72, 121, 373, 568, 946
BstMCI CGRYCG 1 cut(s) 299
BstMWI GCNNNNNNNGC 2 cut(s) 816, 856
BstNI CCWGG 1 cut(s) 378
BstPI GGTNACC 1 cut(s) 54
BstSCI CCNGG 2 cut(s) 298, 376
BstUI CGCG 2 cut(s) 550, 754
BstV1I GCAGC 2 cut(s) 164, 669
BstV2I GAAGAC 1 cut(s) 963
Bsu36I CCTNAGG 1 cut(s) 1100
BsuRI GGCC 1 cut(s) 1098
BtsCI GGATG 1 cut(s) 769
BtsIMutI CAGTG 2 cut(s) 555, 820
BveI ACCTGC 1 cut(s) 1058
Cac8I GCNNGC 3 cut(s) 405, 548, 719
CciI TCATGA 1 cut(s) 795
CfoI GCGC 1 cut(s) 552
CseI GACGC 2 cut(s) 450, 799
Csp6I GTAC 2 cut(s) 579, 897
CviAII CATG 4 cut(s) 632, 698, 796, 822
CviQI GTAC 2 cut(s) 579, 897
DdeI CTNAG 4 cut(s) 275, 388, 852, 1100
DpnI GATC 5 cut(s) 74, 123, 375, 570, 948
DpnII GATC 5 cut(s) 72, 121, 373, 568, 946
DrdI GACNNNNNNGTC 1 cut(s) 791
DriI GACNNNNNGTC 1 cut(s) 188
DseDI GACNNNNNNGTC 1 cut(s) 791
Eam1104I CTCTTC 3 cut(s) 9, 21, 651
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 3 cut(s) 9, 21, 651
Ecl136II GAGCTC 1 cut(s) 217
Eco147I AGGCCT 1 cut(s) 1098
Eco24I GRGCYC 3 cut(s) 219, 258, 326
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 557
Eco81I CCTNAGG 1 cut(s) 1100
Eco88I CYCGRG 1 cut(s) 212
Eco91I GGTNACC 1 cut(s) 54
EcoICRI GAGCTC 1 cut(s) 217
EcoO65I GGTNACC 1 cut(s) 54
EcoRI GAATTC 1 cut(s) 875
EcoRII CCWGG 1 cut(s) 376
EcoT38I GRGCYC 3 cut(s) 219, 258, 326
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 4 cut(s) 635, 701, 799, 825
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FatI CATG 4 cut(s) 631, 697, 795, 821
FauI CCCGC 2 cut(s) 297, 555
FauNDI CATATG 1 cut(s) 521
FbaI TGATCA 1 cut(s) 946
FblI GTMKAC 1 cut(s) 1024
Fnu4HI GCNGC 5 cut(s) 153, 680, 683, 848, 906
FokI GGATG 1 cut(s) 776
FriOI GRGCYC 3 cut(s) 219, 258, 326
Fsp4HI GCNGC 5 cut(s) 153, 680, 683, 848, 906
FspBI CTAG 2 cut(s) 227, 404
GlaI GCGC 1 cut(s) 551
GluI GCNGC 5 cut(s) 153, 680, 683, 848, 906
HaeIII GGCC 1 cut(s) 1098
HapII CCGG 4 cut(s) 23, 299, 670, 761
HgaI GACGC 2 cut(s) 450, 799
HhaI GCGC 1 cut(s) 552
Hin1I GRCGYC 1 cut(s) 810
Hin1II CATG 4 cut(s) 635, 701, 799, 825
Hin6I GCGC 1 cut(s) 550
HinP1I GCGC 1 cut(s) 550
HincII GTYRAC 1 cut(s) 513
HindII GTYRAC 1 cut(s) 513
HindIII AAGCTT 2 cut(s) 719, 965
HinfI GANTC 5 cut(s) 78, 183, 210, 221, 536
HpaII CCGG 4 cut(s) 23, 299, 670, 761
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 2 cut(s) 513, 1025
Hpy188I TCNGA 3 cut(s) 77, 121, 1093
Hpy188III TCNNGA 9 cut(s) 207, 496, 670, 761, 796, 870, 1050, 1073, 1102
Hpy8I GTNNAC 2 cut(s) 513, 1025
Hpy99I CGWCG 1 cut(s) 247
HpyAV CCTTC 1 cut(s) 1088
HpyCH4III ACNGT 2 cut(s) 559, 901
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 3 cut(s) 330, 596, 717
HpyF10VI GCNNNNNNNGC 2 cut(s) 816, 856
HpyF3I CTNAG 4 cut(s) 275, 388, 852, 1100
HpySE526I ACGT 1 cut(s) 97
Hsp92I GRCGYC 1 cut(s) 810
Hsp92II CATG 4 cut(s) 635, 701, 799, 825
HspAI GCGC 1 cut(s) 550
Kpn2I TCCGGA 2 cut(s) 669, 760
Ksp22I TGATCA 1 cut(s) 946
Kzo9I GATC 5 cut(s) 72, 121, 373, 568, 946
LguI GCTCTTC 1 cut(s) 9
LmnI GCTCC 2 cut(s) 329, 628
Lsp1109I GCAGC 2 cut(s) 164, 669
LweI GCATC 2 cut(s) 561, 583
MaeI CTAG 2 cut(s) 227, 404
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 2 cut(s) 54, 310
MalI GATC 5 cut(s) 74, 123, 375, 570, 948
MboI GATC 5 cut(s) 72, 121, 373, 568, 946
MboII GAAGA 6 cut(s) 26, 38, 563, 668, 968, 1028
MhlI GDGCHC 3 cut(s) 219, 258, 326
MluCI AATT 5 cut(s) 128, 360, 365, 688, 875
MlyI GAGTC 3 cut(s) 177, 204, 215
MroI TCCGGA 2 cut(s) 669, 760
MseI TTAA 3 cut(s) 147, 842, 984
MslI CAYNNNNRTG 1 cut(s) 1001
MspA1I CMGCKG 2 cut(s) 163, 682
MspI CCGG 4 cut(s) 23, 299, 670, 761
MspR9I CCNGG 2 cut(s) 300, 378
Mva1269I GAATGC 1 cut(s) 681
MvaI CCWGG 1 cut(s) 378
MvnI CGCG 2 cut(s) 550, 754
MwoI GCNNNNNNNGC 2 cut(s) 816, 856
NciI CCSGG 1 cut(s) 300
NdeI CATATG 1 cut(s) 521
NdeII GATC 5 cut(s) 72, 121, 373, 568, 946
NheI GCTAGC 1 cut(s) 403
NlaIII CATG 4 cut(s) 635, 701, 799, 825
NlaIV GGNNCC 2 cut(s) 325, 740
NmuCI GTSAC 1 cut(s) 310
NspV TTCGAA 3 cut(s) 92, 587, 693
PaeR7I CTCGAG 1 cut(s) 212
PagI TCATGA 1 cut(s) 795
PceI AGGCCT 1 cut(s) 1098
PciSI GCTCTTC 1 cut(s) 9
PctI GAATGC 1 cut(s) 681
PfeI GAWTC 2 cut(s) 78, 536
PkrI GCNGC 5 cut(s) 154, 681, 684, 849, 907
PleI GAGTC 3 cut(s) 177, 204, 215
PpsI GAGTC 3 cut(s) 177, 204, 215
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 1 cut(s) 376
PspEI GGTNACC 1 cut(s) 54
PspGI CCWGG 1 cut(s) 376
PspN4I GGNNCC 2 cut(s) 325, 740
PspXI VCTCGAGB 1 cut(s) 212
RsaI GTAC 2 cut(s) 580, 898
RsaNI GTAC 2 cut(s) 579, 897
RseI CAYNNNNRTG 1 cut(s) 1001
SacI GAGCTC 1 cut(s) 219
SapI GCTCTTC 1 cut(s) 9
SaqAI TTAA 3 cut(s) 147, 842, 984
SatI GCNGC 5 cut(s) 153, 680, 683, 848, 906
Sau3AI GATC 5 cut(s) 72, 121, 373, 568, 946
SchI GAGTC 3 cut(s) 177, 204, 215
ScrFI CCNGG 2 cut(s) 300, 378
SduI GDGCHC 3 cut(s) 219, 258, 326
SfaNI GCATC 2 cut(s) 561, 583
Sfr274I CTCGAG 1 cut(s) 212
SfuI TTCGAA 3 cut(s) 92, 587, 693
SlaI CTCGAG 1 cut(s) 212
SmiMI CAYNNNNRTG 1 cut(s) 1001
SmlI CTYRAG 2 cut(s) 62, 212
SmoI CTYRAG 2 cut(s) 62, 212
Sse9I AATT 5 cut(s) 128, 360, 365, 688, 875
SseBI AGGCCT 1 cut(s) 1098
SsiI CCGC 9 cut(s) 163, 178, 290, 303, 548, 680, 848, 906, 973
SspMI CTAG 2 cut(s) 227, 404
SstI GAGCTC 1 cut(s) 219
StuI AGGCCT 1 cut(s) 1098
StyD4I CCNGG 2 cut(s) 298, 376
TaaI ACNGT 2 cut(s) 559, 901
TaiI ACGT 1 cut(s) 100
TaqI TCGA 8 cut(s) 92, 208, 213, 219, 495, 587, 693, 1081
TasI AATT 5 cut(s) 128, 360, 365, 688, 875
TatI WGTACW 1 cut(s) 896
TauI GCSGC 3 cut(s) 682, 850, 908
TfiI GAWTC 2 cut(s) 78, 536
Tru1I TTAA 3 cut(s) 147, 842, 984
Tru9I TTAA 3 cut(s) 147, 842, 984
TscAI CASTG 2 cut(s) 562, 820
TseFI GTSAC 1 cut(s) 310
TseI GCWGC 2 cut(s) 152, 682
Tsp45I GTSAC 1 cut(s) 310
TspDTI ATGAA 2 cut(s) 408, 590
TspGWI ACGGA 2 cut(s) 76, 253
TspRI CASTG 2 cut(s) 562, 820
XapI RAATTY 3 cut(s) 128, 360, 875
XcmI CCANNNNNNNNNTGG 1 cut(s) 877
XhoI CTCGAG 1 cut(s) 212
XmiI GTMKAC 1 cut(s) 1024
XspI CTAG 2 cut(s) 227, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.