RchiOBHm_Chr2g0107891

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
19483987 .. 19485153
1167 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48188

Sequence Viewer

Length: 1167 bp
ATGGCGGAAACAGAAGAGCTATCTGAAGATATTATAGTGAACATCCTTACTCGGTTGCCCGTCAAGTCCTTAATCCGATTCACCTCCGTTTCCAAACGCCTGCATTCCATTATATTGTCCGATCCCAAATTCGCCCTATCCCAACTTACAGCAGCTCGTCAGCAGAAAACCCTCAGCCGCAGACTCCTCGTCTCCACCGAGACTCTTCCACTCGAATCCCTACACTTGGGTGATACGGCGTCGTTTGGAGAGCCTTTGTCCGTTAGAAAGCTCAGCTTCCCTTTCCAGCCACAACCGGGCGGTTCTGTCAAGCTGCTGGGCTCCTGCAATGGTCTGGTATTTGTAGCTGTTGATAATAAATCCCTTCATATCTGGAACCCGTCGATTGGGTTCTTGAAGCAATTACCTGATCCAGGTTTTCCCTTGGATGATAATGTGCTACCCTATTATGCTGTTGGCTATTTATCCGCCGCTGATGACTACAAAGTTTTGGTAGCCTCCTGTGACTTTTGGTTAGGGGAGATAGAGGTCAAGATGTTCTCATCGAGAACTCACATTTGGCAGAGGATTGAATCCCCTTGCCGCTCCGACTTTCGACTCTTTCGTGGTCAGGGGACTCTTTCGAATGATGCATTTCATTGGCTAAGCTACCGCGACGATGACGAGGAAGAGGAGCATGAAATAGTTTCTTTTGACTTGCAAGAGGAGGTGTTCCAGAGAATGCCACTGCCTAATTTCGACCATGATGGTAAGACTTACACCAGTCTTGGGGTTTGTGGAGGGTGCCTGTGTGTATCGCGTTATCCCAAGGGTGCTTGGGACTCTATCGATTTATGGGTCATGAGAGAATATGGCGTCAATGGCTCATGGATTATGCTTTTTATCTTAAAGCTCTCTGATCCGCCTGAGCTGCCCTCGTTTTCCAGACAATTCTTGGGTGTGGAAAGTAGTACATTTGCCGCGAGTTGGACTGACGAGGGGTCCCAGTTGATAAGGATTGATCATAAAGAAGACGACAAGCTTGGGCGGTATATGCTGAAGTACCGGTACCGGATTTCTATGATTGAATATGAAGAAAGTCTACTTTGGATTAGTAGTTATCATCCGGTAGAAGAGAAAGAGCAGGTCCAGATGTTCGAAACCCAACAGAAGTCATCAGGAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

388

Amino Acids

44.33

Weight (kDa)

5.12

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 43 7.7e-08 F-box domain
FBA_3 PF08268 102 - 285 5.3e-13 F-box associated beta propeller domain
FBA_1 PF07734 106 - 347 1.2e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1114
Acc65I GGTACC 1 cut(s) 1047
AccB1I GGYRCC 2 cut(s) 783, 1047
AccBSI CCGCTC 1 cut(s) 585
AccI GTMKAC 1 cut(s) 1081
AccII CGCG 3 cut(s) 654, 799, 962
AclWI GGATC 3 cut(s) 116, 404, 893
AcsI RAATTY 1 cut(s) 128
AcuI CTGAAG 2 cut(s) 45, 1058
AcyI GRCGYC 2 cut(s) 239, 855
AfaI GTAC 3 cut(s) 952, 1043, 1049
AfiI CCNNNNNNNGG 6 cut(s) 226, 296, 386, 413, 768, 966
AgeI ACCGGT 1 cut(s) 1044
AgsI TTSAA 3 cut(s) 397, 572, 1067
AhdI GACNNNNNGTC 2 cut(s) 188, 979
AjnI CCWGG 1 cut(s) 412
AjuI GAANNNNNNNTTGG 2 cut(s) 541, 573
AleI CACNNNNGTG 1 cut(s) 228
Alw26I GTCTC 2 cut(s) 194, 196
AlwI GGATC 3 cut(s) 116, 404, 893
ApeKI GCWGC 3 cut(s) 152, 313, 910
ApoI RAATTY 1 cut(s) 128
AsiGI ACCGGT 1 cut(s) 1044
Asp718I GGTACC 1 cut(s) 1047
AspS9I GGNCC 2 cut(s) 981, 1126
AsuC2I CCSGG 1 cut(s) 297
AsuHPI GGTGA 2 cut(s) 73, 242
AsuII TTCGAA 2 cut(s) 623, 1137
AvaII GGWCC 2 cut(s) 981, 1126
BanI GGYRCC 2 cut(s) 783, 1047
BanII GRGCYC 1 cut(s) 323
BarI GAAGNNNNNNTAC 4 cut(s) 1031, 1063, 1065, 1097
BbsI GAAGAC 1 cut(s) 1017
BbvCI CCTCAGC 1 cut(s) 173
BbvI GCAGC 3 cut(s) 164, 300, 897
BccI CCATC 1 cut(s) 740
BceAI ACGGC 1 cut(s) 252
BcgI CGANNNNNNTGC 2 cut(s) 169, 203
BciT130I CCWGG 1 cut(s) 414
BclI TGATCA 1 cut(s) 1000
BcnI CCSGG 1 cut(s) 297
BcoDI GTCTC 2 cut(s) 194, 196
BfuAI ACCTGC 1 cut(s) 1114
BisI GCNGC 7 cut(s) 153, 178, 314, 471, 583, 911, 960
BlpI GCTNAGC 2 cut(s) 272, 644
BlsI GCNGC 7 cut(s) 154, 179, 315, 472, 584, 912, 961
Bme1390I CCNGG 2 cut(s) 297, 414
Bme18I GGWCC 2 cut(s) 981, 1126
BmeRI GACNNNNNGTC 2 cut(s) 188, 979
BmgT120I GGNCC 2 cut(s) 981, 1126
BmiI GGNNCC 6 cut(s) 322, 377, 785, 982, 983, 1049
BmrFI CCNGG 2 cut(s) 297, 414
BmrI ACTGGG 1 cut(s) 979
BmsI GCATC 1 cut(s) 619
BmuI ACTGGG 1 cut(s) 979
BpiI GAAGAC 1 cut(s) 1017
BplI GAGNNNNNCTC 2 cut(s) 899, 931
Bpu10I CCTNAGC 2 cut(s) 173, 906
Bpu1102I GCTNAGC 2 cut(s) 272, 644
Bpu14I TTCGAA 2 cut(s) 623, 1137
BpuMI CCSGG 1 cut(s) 297
Bsa29I ATCGAT 1 cut(s) 828
BsaHI GRCGYC 2 cut(s) 239, 855
BsaJI CCNNGG 2 cut(s) 423, 807
BsaWI WCCGGW 3 cut(s) 1044, 1050, 1105
Bsc4I CCNNNNNNNGG 6 cut(s) 226, 296, 386, 413, 768, 966
Bse118I RCCGGY 1 cut(s) 1044
Bse1I ACTGG 2 cut(s) 762, 985
Bse3DI GCAATG 1 cut(s) 334
BseBI CCWGG 1 cut(s) 414
BseCI ATCGAT 1 cut(s) 828
BseDI CCNNGG 2 cut(s) 423, 807
BseGI GGATG 3 cut(s) 42, 433, 1102
BseLI CCNNNNNNNGG 6 cut(s) 226, 296, 386, 413, 768, 966
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 3 cut(s) 187, 286, 897
BseNI ACTGG 2 cut(s) 762, 985
BseRI GAGGAG 3 cut(s) 176, 686, 719
BseXI GCAGC 3 cut(s) 164, 300, 897
BseYI CCCAGC 1 cut(s) 316
Bsh1236I CGCG 3 cut(s) 654, 799, 962
BshNI GGYRCC 2 cut(s) 783, 1047
BshTI ACCGGT 1 cut(s) 1044
BshVI ATCGAT 1 cut(s) 828
BsiSI CCGG 4 cut(s) 296, 1045, 1051, 1106
BslFI GGGAC 3 cut(s) 628, 833, 967
BslI CCNNNNNNNGG 6 cut(s) 226, 296, 386, 413, 768, 966
BsmAI GTCTC 2 cut(s) 194, 196
BsmBI CGTCTC 1 cut(s) 196
BsmFI GGGAC 3 cut(s) 628, 833, 967
BsmI GAATGC 2 cut(s) 103, 726
Bsp119I TTCGAA 2 cut(s) 623, 1137
Bsp1286I GDGCHC 1 cut(s) 323
Bsp143I GATC 4 cut(s) 121, 409, 898, 1000
Bsp1720I GCTNAGC 2 cut(s) 272, 644
BspCNI CTCAG 3 cut(s) 186, 285, 898
BspDI ATCGAT 1 cut(s) 828
BspFNI CGCG 3 cut(s) 654, 799, 962
BspHI TCATGA 1 cut(s) 840
BspLI GGNNCC 6 cut(s) 322, 377, 785, 982, 983, 1049
BspMI ACCTGC 1 cut(s) 1114
BspPI GGATC 3 cut(s) 116, 404, 893
BspQI GCTCTTC 1 cut(s) 9
BspT104I TTCGAA 2 cut(s) 623, 1137
BspT107I GGYRCC 2 cut(s) 783, 1047
BsrBI CCGCTC 1 cut(s) 585
BsrDI GCAATG 1 cut(s) 334
BsrFI RCCGGY 1 cut(s) 1044
BsrI ACTGG 2 cut(s) 762, 985
BssAI RCCGGY 1 cut(s) 1044
BssECI CCNNGG 2 cut(s) 423, 807
BssMI GATC 4 cut(s) 121, 409, 898, 1000
BssNI GRCGYC 2 cut(s) 239, 855
BssT1I CCWWGG 2 cut(s) 423, 807
Bst2UI CCWGG 1 cut(s) 414
Bst6I CTCTTC 4 cut(s) 9, 210, 663, 1107
BstACI GRCGYC 2 cut(s) 239, 855
BstBI TTCGAA 2 cut(s) 623, 1137
BstC8I GCNNGC 1 cut(s) 101
BstDEI CTNAG 4 cut(s) 173, 272, 644, 906
BstENI CCTNNNNNAGG 1 cut(s) 411
BstF5I GGATG 3 cut(s) 42, 433, 1102
BstFNI CGCG 3 cut(s) 654, 799, 962
BstKTI GATC 4 cut(s) 124, 412, 901, 1003
BstMAI GTCTC 2 cut(s) 194, 196
BstMBI GATC 4 cut(s) 121, 409, 898, 1000
BstMWI GCNNNNNNNGC 3 cut(s) 861, 910, 1033
BstNI CCWGG 1 cut(s) 414
BstSCI CCNGG 2 cut(s) 295, 412
BstUI CGCG 3 cut(s) 654, 799, 962
BstV1I GCAGC 3 cut(s) 164, 300, 897
BstV2I GAAGAC 1 cut(s) 1017
Bsu15I ATCGAT 1 cut(s) 828
BsuTUI ATCGAT 1 cut(s) 828
BtsCI GGATG 3 cut(s) 42, 433, 1102
BtsI GCAGTG 1 cut(s) 725
BtsIMutI CAGTG 1 cut(s) 725
BveI ACCTGC 1 cut(s) 1114
Cac8I GCNNGC 1 cut(s) 101
CciI TCATGA 1 cut(s) 840
Cfr10I RCCGGY 1 cut(s) 1044
Cfr13I GGNCC 2 cut(s) 981, 1126
ClaI ATCGAT 1 cut(s) 828
CseI GACGC 2 cut(s) 228, 844
Csp6I GTAC 3 cut(s) 951, 1042, 1048
CspAI ACCGGT 1 cut(s) 1044
CviAII CATG 4 cut(s) 677, 743, 841, 867
CviQI GTAC 3 cut(s) 951, 1042, 1048
DdeI CTNAG 4 cut(s) 173, 272, 644, 906
DpnI GATC 4 cut(s) 123, 411, 900, 1002
DpnII GATC 4 cut(s) 121, 409, 898, 1000
DriI GACNNNNNGTC 2 cut(s) 188, 979
Eam1104I CTCTTC 4 cut(s) 9, 210, 663, 1107
Eam1105I GACNNNNNGTC 2 cut(s) 188, 979
EarI CTCTTC 4 cut(s) 9, 210, 663, 1107
EciI GGCGGA 3 cut(s) 20, 457, 891
Eco130I CCWWGG 2 cut(s) 423, 807
Eco24I GRGCYC 1 cut(s) 323
Eco47I GGWCC 2 cut(s) 981, 1126
Eco57I CTGAAG 2 cut(s) 45, 1058
EcoNI CCTNNNNNAGG 1 cut(s) 411
EcoO109I RGGNCCY 1 cut(s) 981
EcoRII CCWGG 1 cut(s) 412
EcoT14I CCWWGG 2 cut(s) 423, 807
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 1 cut(s) 323
ErhI CCWWGG 2 cut(s) 423, 807
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 4 cut(s) 680, 746, 844, 870
FalI AAGNNNNNCTT 2 cut(s) 260, 292
FaqI GGGAC 3 cut(s) 628, 833, 967
FatI CATG 4 cut(s) 676, 742, 840, 866
FbaI TGATCA 1 cut(s) 1000
FblI GTMKAC 1 cut(s) 1081
Fnu4HI GCNGC 7 cut(s) 153, 178, 314, 471, 583, 911, 960
FokI GGATG 3 cut(s) 29, 440, 1089
FriOI GRGCYC 1 cut(s) 323
Fsp4HI GCNGC 7 cut(s) 153, 178, 314, 471, 583, 911, 960
GluI GCNGC 7 cut(s) 153, 178, 314, 471, 583, 911, 960
GsaI CCCAGC 1 cut(s) 320
HapII CCGG 4 cut(s) 296, 1045, 1051, 1106
HgaI GACGC 2 cut(s) 228, 844
Hin1I GRCGYC 2 cut(s) 239, 855
Hin1II CATG 4 cut(s) 680, 746, 844, 870
HindIII AAGCTT 1 cut(s) 1019
HinfI GANTC 8 cut(s) 78, 183, 202, 215, 572, 597, 616, 821
HpaII CCGG 4 cut(s) 296, 1045, 1051, 1106
HphI GGTGA 2 cut(s) 73, 242
Hpy166II GTNNAC 2 cut(s) 40, 1082
Hpy188I TCNGA 5 cut(s) 25, 77, 121, 589, 898
Hpy188III TCNNGA 9 cut(s) 373, 394, 532, 546, 715, 841, 924, 1129, 1158
Hpy8I GTNNAC 2 cut(s) 40, 1082
Hpy99I CGWCG 3 cut(s) 244, 385, 659
HpyAV CCTTC 1 cut(s) 374
HpyCH4V TGCA 4 cut(s) 103, 327, 632, 700
HpyF10VI GCNNNNNNNGC 3 cut(s) 861, 910, 1033
HpyF3I CTNAG 4 cut(s) 173, 272, 644, 906
Hsp92I GRCGYC 2 cut(s) 239, 855
Hsp92II CATG 4 cut(s) 680, 746, 844, 870
KflI GGGWCCC 1 cut(s) 981
KpnI GGTACC 1 cut(s) 1051
Ksp22I TGATCA 1 cut(s) 1000
Kzo9I GATC 4 cut(s) 121, 409, 898, 1000
LguI GCTCTTC 1 cut(s) 9
LmnI GCTCC 3 cut(s) 326, 590, 673
Lsp1109I GCAGC 3 cut(s) 164, 300, 897
LweI GCATC 1 cut(s) 619
MaeIII GTNAC 1 cut(s) 503
MalI GATC 4 cut(s) 123, 411, 900, 1002
MbiI CCGCTC 1 cut(s) 585
MboI GATC 4 cut(s) 121, 409, 898, 1000
MboII GAAGA 7 cut(s) 26, 38, 197, 680, 1022, 1085, 1124
MhlI GDGCHC 1 cut(s) 323
MluCI AATT 4 cut(s) 128, 401, 733, 929
MlyI GAGTC 5 cut(s) 177, 196, 591, 610, 815
MmeI TCCRAC 2 cut(s) 612, 947
Mph1103I ATGCAT 1 cut(s) 634
MseI TTAA 2 cut(s) 71, 887
MslI CAYNNNNRTG 1 cut(s) 228
MspA1I CMGCKG 1 cut(s) 473
MspI CCGG 4 cut(s) 296, 1045, 1051, 1106
MspR9I CCNGG 2 cut(s) 297, 414
Mva1269I GAATGC 2 cut(s) 103, 726
MvaI CCWGG 1 cut(s) 414
MvnI CGCG 3 cut(s) 654, 799, 962
MwoI GCNNNNNNNGC 3 cut(s) 861, 910, 1033
NciI CCSGG 1 cut(s) 297
NdeII GATC 4 cut(s) 121, 409, 898, 1000
NlaIII CATG 4 cut(s) 680, 746, 844, 870
NlaIV GGNNCC 6 cut(s) 322, 377, 785, 982, 983, 1049
NmuCI GTSAC 1 cut(s) 503
NsiI ATGCAT 1 cut(s) 634
NspV TTCGAA 2 cut(s) 623, 1137
OliI CACNNNNGTG 1 cut(s) 228
PagI TCATGA 1 cut(s) 840
PciSI GCTCTTC 1 cut(s) 9
PcsI WCGNNNNNNNCGW 2 cut(s) 195, 601
PctI GAATGC 2 cut(s) 103, 726
PfeI GAWTC 3 cut(s) 78, 215, 572
PinAI ACCGGT 1 cut(s) 1044
PkrI GCNGC 7 cut(s) 154, 179, 315, 472, 584, 912, 961
PleI GAGTC 5 cut(s) 177, 196, 591, 610, 815
PpsI GAGTC 5 cut(s) 177, 196, 591, 610, 815
PpuMI RGGWCCY 1 cut(s) 981
Psp5II RGGWCCY 1 cut(s) 981
Psp6I CCWGG 1 cut(s) 412
PspFI CCCAGC 1 cut(s) 316
PspGI CCWGG 1 cut(s) 412
PspN4I GGNNCC 6 cut(s) 322, 377, 785, 982, 983, 1049
PspPI GGNCC 2 cut(s) 981, 1126
PspPPI RGGWCCY 1 cut(s) 981
RsaI GTAC 3 cut(s) 952, 1043, 1049
RsaNI GTAC 3 cut(s) 951, 1042, 1048
RseI CAYNNNNRTG 1 cut(s) 228
SapI GCTCTTC 1 cut(s) 9
SaqAI TTAA 2 cut(s) 71, 887
SatI GCNGC 7 cut(s) 153, 178, 314, 471, 583, 911, 960
Sau3AI GATC 4 cut(s) 121, 409, 898, 1000
Sau96I GGNCC 2 cut(s) 981, 1126
SchI GAGTC 5 cut(s) 177, 196, 591, 610, 815
ScrFI CCNGG 2 cut(s) 297, 414
SduI GDGCHC 1 cut(s) 323
SfaNI GCATC 1 cut(s) 619
SfuI TTCGAA 2 cut(s) 623, 1137
SinI GGWCC 2 cut(s) 981, 1126
SmiMI CAYNNNNRTG 1 cut(s) 228
Sse9I AATT 4 cut(s) 128, 401, 733, 929
StyD4I CCNGG 2 cut(s) 295, 412
StyI CCWWGG 2 cut(s) 423, 807
TaqI TCGA 8 cut(s) 213, 383, 545, 595, 623, 738, 828, 1137
TasI AATT 4 cut(s) 128, 401, 733, 929
TatI WGTACW 1 cut(s) 950
TauI GCSGC 4 cut(s) 180, 473, 585, 962
TfiI GAWTC 3 cut(s) 78, 215, 572
Tru1I TTAA 2 cut(s) 71, 887
Tru9I TTAA 2 cut(s) 71, 887
TscAI CASTG 1 cut(s) 732
TseFI GTSAC 1 cut(s) 503
TseI GCWGC 3 cut(s) 152, 313, 910
Tsp45I GTSAC 1 cut(s) 503
TspDTI ATGAA 4 cut(s) 356, 626, 693, 1086
TspGWI ACGGA 2 cut(s) 76, 250
TspRI CASTG 1 cut(s) 732
VpaK11BI GGWCC 2 cut(s) 981, 1126
XagI CCTNNNNNAGG 1 cut(s) 411
XapI RAATTY 1 cut(s) 128
XcmI CCANNNNNNNNNTGG 1 cut(s) 931
XmiI GTMKAC 1 cut(s) 1081
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.