RchiOBHm_Chr2g0107841

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
19440692 .. 19444754
4063 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48183

Sequence Viewer

Length: 1191 bp
ATGGCGGAAACAGAAGAGCTACCGGAAGAGATTATAGTGAATATCCTTACTTGGTTGCCCCTCAAGTCCTTAATCCGATTCACCTCCGTTTCCAAACGCCTGCATTCCATTATATTGTCCGATCCCAAATTCGCCCAATCCCAACTCAAAGCAGCTCGTCAGCAGAAAACCCTCAGCCGCAGACTTCTCGTCTCCACCGACTACTTTCCCTACAACTGTGGACCTCAATTCGAATCCCTACGCTTAGATCATACGTCGTCGTTTGGAGACCCTTCCTCCGTTACAAAGCTCAGTCTCCCTTTCCCACCACCACGGTTCTGTCATATCAAGCTACTGGGTTCCTGCAATGGTCTGGTATTTCTTGTAATTTTTTCTTTTGGTGAGAAACTGTTTTACATCTGGAACCCAGCCATTGGATTGTTCAAGCAATTACCTGACCCAGGTTTTCCATGTACTGGAAGTTTGCCACCAGTGACCGCAAGTTTTTATGGTGTGGGCTACTTGTCGGCCACTGATGACTACAAAGTTTTGGCAGCCTGCAGGGATGGCTTTCATGAAACGGAGAAAGAGGTCCGGATATTCTCAGTGAGAACTCATCTTTGGGAGAGCATTGAATCCCTCAGCGATGTTAGACTCGGTAGTCGAGGGACTCTTTCGAATAATGCACTTCATTGGCTAAATCACCAGAACGAGCATGAAATGGTCTCTTTTGACTTGGCTGTGCAGGAGTTCCGGAGAATGGCACTGCCTACTTTCGACCATGATGGTGAGAGTTTGAGCCGTCTTGGGGTTTATGGAGGGTGCCTGTGTGTGTCGCGTATTCCGGAGGGTGCTTGTGACTCTATTGATCTCTGGGTCATGAAAGAATATGACGTGTGTGACTCGTGGTCTATGCTCTTTAGCTTAAAGCTCTCCCACCCGCTTGAGTTGCACTGTTTTCACTCATATATTGCAGAGTTCTTGATTGTGGAGAGTAGTACAGTTGCCGCGAGTGTATCTGGCCCCGGGATCACGTTGATAAATATTGATCATAATGGAGACGATAAGCTTGGCCAGTATATGGTTGAAGGTCATGTGATTTCTATGATTGAATATGAAGAGAGTCTACTTTGGATTGGTGGTTATCATCCAGTTGAAGAGAAAGAGCAGGTCCAGATACTCGAAATCCATCAGAAGGCCTCACAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

396

Amino Acids

44.61

Weight (kDa)

5.43

Isoelectric Point (pI)

54.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 2.2e-07 F-box-like
F-box PF00646 6 - 43 4e-09 F-box domain
FBA_3 PF08268 93 - 297 5.6e-13 F-box associated beta propeller domain
FBA_1 PF07734 106 - 333 2.5e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 639
Acc36I ACCTGC 1 cut(s) 1138
AccB1I GGYRCC 1 cut(s) 801
AccB7I CCANNNNNTGG 3 cut(s) 413, 455, 1060
AccI GTMKAC 1 cut(s) 1105
AccII CGCG 2 cut(s) 817, 989
AccIII TCCGGA 3 cut(s) 573, 732, 823
AciI CCGC 5 cut(s) 5, 178, 477, 920, 987
AclWI GGATC 2 cut(s) 116, 1016
AcoI YGGCCR 2 cut(s) 507, 1051
AcsI RAATTY 1 cut(s) 128
AfaI GTAC 2 cut(s) 454, 979
AfiI CCNNNNNNNGG 7 cut(s) 413, 440, 455, 739, 787, 1060, 1174
AflIII ACRYGT 1 cut(s) 873
AgsI TTSAA 5 cut(s) 424, 614, 1067, 1091, 1136
AhdI GACNNNNNGTC 2 cut(s) 188, 886
AjiI CACGTC 1 cut(s) 874
AjnI CCWGG 1 cut(s) 439
AjuI GAANNNNNNNTTGG 2 cut(s) 583, 615
AluBI AGCT 8 cut(s) 19, 155, 289, 331, 903, 910, 1048, 1188
AluI AGCT 8 cut(s) 19, 155, 289, 331, 903, 910, 1048, 1188
Alw26I GTCTC 5 cut(s) 196, 261, 299, 709, 1032
AlwI GGATC 2 cut(s) 116, 1016
Ama87I CYCGRG 1 cut(s) 1004
Aor13HI TCCGGA 3 cut(s) 573, 732, 823
AoxI GGCC 4 cut(s) 507, 1000, 1051, 1176
ApeKI GCWGC 2 cut(s) 152, 533
ApoI RAATTY 1 cut(s) 128
AspS9I GGNCC 4 cut(s) 221, 571, 1001, 1150
AsuC2I CCSGG 2 cut(s) 1005, 1006
AsuHPI GGTGA 4 cut(s) 73, 392, 674, 779
AsuII TTCGAA 2 cut(s) 231, 656
AvaI CYCGRG 1 cut(s) 1004
AvaII GGWCC 3 cut(s) 221, 571, 1150
BalI TGGCCA 1 cut(s) 1053
BanI GGYRCC 1 cut(s) 801
BarI GAAGNNNNNNTAC 2 cut(s) 1089, 1121
BauI CACGAG 1 cut(s) 883
BbvCI CCTCAGC 2 cut(s) 173, 620
BbvI GCAGC 2 cut(s) 164, 545
BccI CCATC 3 cut(s) 539, 758, 1176
BceAI ACGGC 1 cut(s) 765
BcgI CGANNNNNNTGC 2 cut(s) 169, 203
BciT130I CCWGG 1 cut(s) 441
BclI TGATCA 1 cut(s) 1027
BcnI CCSGG 2 cut(s) 1005, 1006
BcoDI GTCTC 5 cut(s) 196, 261, 299, 709, 1032
BfmI CTRYAG 1 cut(s) 538
BfuAI ACCTGC 1 cut(s) 1138
BisI GCNGC 4 cut(s) 153, 178, 534, 987
BlsI GCNGC 4 cut(s) 154, 179, 535, 988
Bme1390I CCNGG 3 cut(s) 441, 1005, 1006
Bme18I GGWCC 3 cut(s) 221, 571, 1150
BmeRI GACNNNNNGTC 2 cut(s) 188, 886
BmeT110I CYCGRG 1 cut(s) 1004
BmgBI CACGTC 1 cut(s) 874
BmgT120I GGNCC 4 cut(s) 221, 571, 1001, 1150
BmiI GGNNCC 4 cut(s) 340, 404, 803, 1003
BmrFI CCNGG 3 cut(s) 441, 1005, 1006
BmrI ACTGGG 1 cut(s) 344
BmuI ACTGGG 1 cut(s) 344
Bpu10I CCTNAGC 2 cut(s) 173, 620
Bpu14I TTCGAA 2 cut(s) 231, 656
BpuEI CTTGAG 2 cut(s) 47, 944
BpuMI CCSGG 2 cut(s) 1005, 1006
BsaI GGTCTC 2 cut(s) 261, 709
BsaJI CCNNGG 4 cut(s) 311, 439, 1003, 1004
BsaWI WCCGGW 4 cut(s) 22, 573, 732, 823
BsaXI ACNNNNNCTCC 2 cut(s) 260, 290
Bsc4I CCNNNNNNNGG 7 cut(s) 413, 440, 455, 739, 787, 1060, 1174
Bse1I ACTGG 5 cut(s) 339, 460, 470, 1054, 1130
Bse3DI GCAATG 1 cut(s) 352
BseAI TCCGGA 3 cut(s) 573, 732, 823
BseBI CCWGG 1 cut(s) 441
BseDI CCNNGG 4 cut(s) 311, 439, 1003, 1004
BseGI GGATG 2 cut(s) 550, 1126
BseLI CCNNNNNNNGG 7 cut(s) 413, 440, 455, 739, 787, 1060, 1174
BseMI GCAATG 1 cut(s) 352
BseMII CTCAG 4 cut(s) 187, 304, 597, 634
BseNI ACTGG 5 cut(s) 339, 460, 470, 1054, 1130
BseXI GCAGC 2 cut(s) 164, 545
BseYI CCCAGC 1 cut(s) 406
BsgI GTGCAG 1 cut(s) 743
Bsh1236I CGCG 2 cut(s) 817, 989
BshFI GGCC 4 cut(s) 509, 1002, 1053, 1178
BshNI GGYRCC 1 cut(s) 801
BsiHKCI CYCGRG 1 cut(s) 1004
BsiSI CCGG 5 cut(s) 23, 574, 733, 824, 1005
BslFI GGGAC 1 cut(s) 661
BslI CCNNNNNNNGG 7 cut(s) 413, 440, 455, 739, 787, 1060, 1174
BsmAI GTCTC 5 cut(s) 196, 261, 299, 709, 1032
BsmBI CGTCTC 2 cut(s) 196, 1032
BsmFI GGGAC 1 cut(s) 661
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 4 cut(s) 509, 1002, 1053, 1178
Bso31I GGTCTC 2 cut(s) 261, 709
BsoBI CYCGRG 1 cut(s) 1004
Bsp119I TTCGAA 2 cut(s) 231, 656
Bsp13I TCCGGA 3 cut(s) 573, 732, 823
Bsp143I GATC 5 cut(s) 121, 247, 847, 1008, 1027
BspACI CCGC 5 cut(s) 5, 178, 477, 920, 987
BspANI GGCC 4 cut(s) 509, 1002, 1053, 1178
BspCNI CTCAG 4 cut(s) 186, 303, 596, 633
BspEI TCCGGA 3 cut(s) 573, 732, 823
BspFNI CGCG 2 cut(s) 817, 989
BspHI TCATGA 2 cut(s) 553, 858
BspLI GGNNCC 4 cut(s) 340, 404, 803, 1003
BspMAI CTGCAG 1 cut(s) 542
BspMI ACCTGC 1 cut(s) 1138
BspPI GGATC 2 cut(s) 116, 1016
BspQI GCTCTTC 1 cut(s) 9
BspT104I TTCGAA 2 cut(s) 231, 656
BspT107I GGYRCC 1 cut(s) 801
BspTNI GGTCTC 2 cut(s) 261, 709
BsrDI GCAATG 1 cut(s) 352
BsrI ACTGG 5 cut(s) 339, 460, 470, 1054, 1130
BssECI CCNNGG 4 cut(s) 311, 439, 1003, 1004
BssMI GATC 5 cut(s) 121, 247, 847, 1008, 1027
BssSI CACGAG 1 cut(s) 883
Bst2BI CACGAG 1 cut(s) 883
Bst2UI CCWGG 1 cut(s) 441
Bst4CI ACNGT 5 cut(s) 218, 315, 390, 935, 982
Bst6I CTCTTC 4 cut(s) 9, 21, 1092, 1131
BstBI TTCGAA 2 cut(s) 231, 656
BstC8I GCNNGC 2 cut(s) 101, 538
BstDEI CTNAG 5 cut(s) 173, 244, 290, 583, 620
BstDSI CCRYGG 1 cut(s) 311
BstENI CCTNNNNNAGG 1 cut(s) 438
BstF5I GGATG 2 cut(s) 550, 1126
BstFNI CGCG 2 cut(s) 817, 989
BstKTI GATC 5 cut(s) 124, 250, 850, 1011, 1030
BstMAI GTCTC 5 cut(s) 196, 261, 299, 709, 1032
BstMBI GATC 5 cut(s) 121, 247, 847, 1008, 1027
BstMWI GCNNNNNNNGC 2 cut(s) 546, 928
BstNI CCWGG 1 cut(s) 441
BstSCI CCNGG 3 cut(s) 439, 1003, 1004
BstSFI CTRYAG 1 cut(s) 538
BstUI CGCG 2 cut(s) 817, 989
BstV1I GCAGC 2 cut(s) 164, 545
BsuRI GGCC 4 cut(s) 509, 1002, 1053, 1178
BtgI CCRYGG 1 cut(s) 311
BtgZI GCGATG 1 cut(s) 639
BtrI CACGTC 1 cut(s) 874
BtsCI GGATG 2 cut(s) 550, 1126
BtsI GCAGTG 1 cut(s) 743
BtsIMutI CAGTG 5 cut(s) 477, 510, 591, 743, 931
BveI ACCTGC 1 cut(s) 1138
Cac8I GCNNGC 2 cut(s) 101, 538
CciI TCATGA 2 cut(s) 553, 858
Cfr13I GGNCC 4 cut(s) 221, 571, 1001, 1150
Cfr9I CCCGGG 1 cut(s) 1004
Csp6I GTAC 2 cut(s) 453, 978
CviAII CATG 6 cut(s) 450, 554, 695, 761, 859, 1073
CviQI GTAC 2 cut(s) 453, 978
DdeI CTNAG 5 cut(s) 173, 244, 290, 583, 620
DpnI GATC 5 cut(s) 123, 249, 849, 1010, 1029
DpnII GATC 5 cut(s) 121, 247, 847, 1008, 1027
DrdI GACNNNNNNGTC 1 cut(s) 639
DriI GACNNNNNGTC 2 cut(s) 188, 886
DseDI GACNNNNNNGTC 1 cut(s) 639
EaeI YGGCCR 2 cut(s) 507, 1051
Eam1104I CTCTTC 4 cut(s) 9, 21, 1092, 1131
Eam1105I GACNNNNNGTC 2 cut(s) 188, 886
EarI CTCTTC 4 cut(s) 9, 21, 1092, 1131
EciI GGCGGA 1 cut(s) 20
Eco147I AGGCCT 1 cut(s) 1178
Eco31I GGTCTC 2 cut(s) 261, 709
Eco47I GGWCC 3 cut(s) 221, 571, 1150
Eco88I CYCGRG 1 cut(s) 1004
EcoNI CCTNNNNNAGG 1 cut(s) 438
EcoRII CCWGG 1 cut(s) 439
Esp3I CGTCTC 2 cut(s) 196, 1032
FaeI CATG 6 cut(s) 453, 557, 698, 764, 862, 1076
FaqI GGGAC 1 cut(s) 661
FatI CATG 6 cut(s) 449, 553, 694, 760, 858, 1072
FauI CCCGC 1 cut(s) 927
FbaI TGATCA 1 cut(s) 1027
FblI GTMKAC 1 cut(s) 1105
Fnu4HI GCNGC 4 cut(s) 153, 178, 534, 987
FokI GGATG 2 cut(s) 557, 1113
Fsp4HI GCNGC 4 cut(s) 153, 178, 534, 987
GluI GCNGC 4 cut(s) 153, 178, 534, 987
GsaI CCCAGC 1 cut(s) 410
HaeIII GGCC 4 cut(s) 509, 1002, 1053, 1178
HapII CCGG 5 cut(s) 23, 574, 733, 824, 1005
Hin1II CATG 6 cut(s) 453, 557, 698, 764, 862, 1076
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 8 cut(s) 78, 233, 614, 633, 649, 839, 881, 1102
HpaII CCGG 5 cut(s) 23, 574, 733, 824, 1005
HphI GGTGA 4 cut(s) 73, 392, 674, 779
Hpy166II GTNNAC 2 cut(s) 221, 1106
Hpy188I TCNGA 3 cut(s) 77, 121, 1173
Hpy188III TCNNGA 8 cut(s) 400, 554, 574, 733, 824, 859, 961, 1153
Hpy8I GTNNAC 2 cut(s) 221, 1106
Hpy99I CGWCG 2 cut(s) 259, 262
HpyAV CCTTC 3 cut(s) 282, 1061, 1168
HpyCH4III ACNGT 5 cut(s) 218, 315, 390, 935, 982
HpyCH4IV ACGT 3 cut(s) 254, 873, 1013
HpyCH4V TGCA 7 cut(s) 103, 345, 540, 665, 724, 931, 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 546, 928
HpyF3I CTNAG 5 cut(s) 173, 244, 290, 583, 620
HpySE526I ACGT 3 cut(s) 254, 873, 1013
Hsp92II CATG 6 cut(s) 453, 557, 698, 764, 862, 1076
Kpn2I TCCGGA 3 cut(s) 573, 732, 823
Ksp22I TGATCA 1 cut(s) 1027
Kzo9I GATC 5 cut(s) 121, 247, 847, 1008, 1027
LguI GCTCTTC 1 cut(s) 9
Lsp1109I GCAGC 2 cut(s) 164, 545
MaeII ACGT 3 cut(s) 254, 873, 1013
MaeIII GTNAC 4 cut(s) 280, 472, 836, 878
MalI GATC 5 cut(s) 123, 249, 849, 1010, 1029
MboI GATC 5 cut(s) 121, 247, 847, 1008, 1027
MboII GAAGA 4 cut(s) 26, 38, 1109, 1148
MlsI TGGCCA 1 cut(s) 1053
MluCI AATT 4 cut(s) 128, 227, 366, 428
MluNI TGGCCA 1 cut(s) 1053
MlyI GAGTC 5 cut(s) 627, 643, 833, 875, 1111
Mox20I TGGCCA 1 cut(s) 1053
MroI TCCGGA 3 cut(s) 573, 732, 823
MscI TGGCCA 1 cut(s) 1053
MseI TTAA 2 cut(s) 71, 905
MslI CAYNNNNRTG 1 cut(s) 765
Msp20I TGGCCA 1 cut(s) 1053
MspI CCGG 5 cut(s) 23, 574, 733, 824, 1005
MspR9I CCNGG 3 cut(s) 441, 1005, 1006
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 1 cut(s) 441
MvnI CGCG 2 cut(s) 817, 989
MwoI GCNNNNNNNGC 2 cut(s) 546, 928
NciI CCSGG 2 cut(s) 1005, 1006
NdeII GATC 5 cut(s) 121, 247, 847, 1008, 1027
NlaIII CATG 6 cut(s) 453, 557, 698, 764, 862, 1076
NlaIV GGNNCC 4 cut(s) 340, 404, 803, 1003
NmuCI GTSAC 3 cut(s) 472, 836, 878
NspV TTCGAA 2 cut(s) 231, 656
PagI TCATGA 2 cut(s) 553, 858
PceI AGGCCT 1 cut(s) 1178
PciSI GCTCTTC 1 cut(s) 9
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 3 cut(s) 78, 233, 614
PflMI CCANNNNNTGG 3 cut(s) 413, 455, 1060
PkrI GCNGC 4 cut(s) 154, 179, 535, 988
PleI GAGTC 5 cut(s) 627, 643, 833, 875, 1110
PpsI GAGTC 5 cut(s) 627, 643, 833, 875, 1110
Psp6I CCWGG 1 cut(s) 439
PspFI CCCAGC 1 cut(s) 406
PspGI CCWGG 1 cut(s) 439
PspN4I GGNNCC 4 cut(s) 340, 404, 803, 1003
PspPI GGNCC 4 cut(s) 221, 571, 1001, 1150
PstI CTGCAG 1 cut(s) 542
RsaI GTAC 2 cut(s) 454, 979
RsaNI GTAC 2 cut(s) 453, 978
RseI CAYNNNNRTG 1 cut(s) 765
SapI GCTCTTC 1 cut(s) 9
SaqAI TTAA 2 cut(s) 71, 905
SatI GCNGC 4 cut(s) 153, 178, 534, 987
Sau3AI GATC 5 cut(s) 121, 247, 847, 1008, 1027
Sau96I GGNCC 4 cut(s) 221, 571, 1001, 1150
SbfI CCTGCAGG 1 cut(s) 542
SchI GAGTC 5 cut(s) 627, 643, 833, 875, 1111
ScrFI CCNGG 3 cut(s) 441, 1005, 1006
SdaI CCTGCAGG 1 cut(s) 542
SfcI CTRYAG 1 cut(s) 538
SfuI TTCGAA 2 cut(s) 231, 656
SinI GGWCC 3 cut(s) 221, 571, 1150
SmaI CCCGGG 1 cut(s) 1006
SmiMI CAYNNNNRTG 1 cut(s) 765
SmlI CTYRAG 2 cut(s) 62, 923
SmoI CTYRAG 2 cut(s) 62, 923
Sse8387I CCTGCAGG 1 cut(s) 542
Sse9I AATT 4 cut(s) 128, 227, 366, 428
SseBI AGGCCT 1 cut(s) 1178
SsiI CCGC 5 cut(s) 5, 178, 477, 920, 987
SspI AATATT 1 cut(s) 1024
StuI AGGCCT 1 cut(s) 1178
StyD4I CCNGG 3 cut(s) 439, 1003, 1004
TaaI ACNGT 5 cut(s) 218, 315, 390, 935, 982
TaiI ACGT 3 cut(s) 257, 876, 1016
TaqI TCGA 5 cut(s) 231, 643, 656, 756, 1161
TasI AATT 4 cut(s) 128, 227, 366, 428
TatI WGTACW 2 cut(s) 452, 977
TauI GCSGC 2 cut(s) 180, 989
TfiI GAWTC 3 cut(s) 78, 233, 614
Tru1I TTAA 2 cut(s) 71, 905
Tru9I TTAA 2 cut(s) 71, 905
TscAI CASTG 5 cut(s) 477, 517, 591, 750, 938
TseFI GTSAC 3 cut(s) 472, 836, 878
TseI GCWGC 2 cut(s) 152, 533
Tsp45I GTSAC 3 cut(s) 472, 836, 878
TspDTI ATGAA 6 cut(s) 542, 570, 659, 711, 875, 1110
TspGWI ACGGA 3 cut(s) 76, 268, 575
TspMI CCCGGG 1 cut(s) 1004
TspRI CASTG 5 cut(s) 477, 517, 591, 750, 938
Van91I CCANNNNNTGG 3 cut(s) 413, 455, 1060
VpaK11BI GGWCC 3 cut(s) 221, 571, 1150
XagI CCTNNNNNAGG 1 cut(s) 438
XapI RAATTY 1 cut(s) 128
XmaI CCCGGG 1 cut(s) 1004
XmiI GTMKAC 1 cut(s) 1105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.