Rroxscaffold_2G00135850

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
73365760 .. 73366690
931 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00135850.1

Sequence Viewer

Length: 828 bp
ATGGCAGAAACGGAGGACCTACCGGAAGAGATTATAGTGAATATCCTTACTTGGTTGCCCCTCAAGTCCCTAATCCGATTCACCTCCGTTTCGAAACGACTGCGTTCCATTATTTTGTCCGATCCCAAATTCGCTCTATCCCAACTTAAAGCAGCTCGTCAGCAGAAAACCCTCAGCCGCAGACTCCTCGTCTCCACCGACGCCCCTCCACTCGAGCTCGACTCCCTAGACTTGGATACGCCGTCGTTTGGAGAGCCTTCCTCCGTTAGAAAGCTCAGCTTCCCTTTCCCGCCACGACCGGGCGATTATGTCACGCTACTGGGCTCCTGCAATGGTCTGGTATTTGTAGCTGTTGATGATAAATTGTTTTATATCTGGAACCCATTCATTGGATTCTTGAAGCAATTACCTGATCCAGGTTTTCCCTTGGATAAAAATGTGCTATGCTATTATGGTGTTGGCTATTTGTCCGCCACCGATGACTACAAAGTTTTGGTAGCCTCCTATAGCTATTATGGTGAATGGGAGATAGAGGTCGAGATGTTCTCATCGAGAACTCACATATGGCAGAGGATTGAATCCCCCTCGCAGGAGGTGTTCCGGAGAATGCCACTGCCTAATTTCGAGCATGATGGTAAGACTTTCGGCAAGCTTGGGGTTTGTGGAGGGTGCCTGTGTGTATCGCGTTATCCGGATGGTGCTCTTGACTCTATTGATTTCTGGGTCATGAGAGAATATGGCGTCAGTGCCTCATGGATTATGCTCTTGAGCTTAAAGCCGCCTGAGTTGCCCTTGTATTCCAGAGAATTCTTGGTTGTGGGAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

275

Amino Acids

31.21

Weight (kDa)

5.39

Isoelectric Point (pI)

50.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 6.8e-08 F-box-like
F-box PF00646 6 - 43 5.7e-10 F-box domain
FBA_1 PF07734 107 - 194 2e-07 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 669
AccB7I CCANNNNNTGG 1 cut(s) 389
AccII CGCG 1 cut(s) 685
AccIII TCCGGA 2 cut(s) 600, 691
AciI CCGC 4 cut(s) 178, 290, 471, 779
AclWI GGATC 2 cut(s) 116, 407
AcsI RAATTY 2 cut(s) 128, 806
AcyI GRCGYC 2 cut(s) 201, 741
AfiI CCNNNNNNNGG 6 cut(s) 232, 248, 299, 389, 416, 589
AgsI TTSAA 2 cut(s) 400, 578
AhdI GACNNNNNGTC 1 cut(s) 188
AjnI CCWGG 1 cut(s) 415
AluBI AGCT 8 cut(s) 155, 217, 274, 279, 350, 510, 652, 771
AluI AGCT 8 cut(s) 155, 217, 274, 279, 350, 510, 652, 771
Alw21I GWGCWC 2 cut(s) 219, 703
Alw26I GTCTC 1 cut(s) 196
AlwI GGATC 2 cut(s) 116, 407
Ama87I CYCGRG 1 cut(s) 212
Aor13HI TCCGGA 2 cut(s) 600, 691
ApeKI GCWGC 1 cut(s) 152
ApoI RAATTY 2 cut(s) 128, 806
Asp700I GAANNNNTTC 1 cut(s) 383
AspS9I GGNCC 1 cut(s) 16
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 2 cut(s) 73, 530
AsuII TTCGAA 1 cut(s) 92
AvaI CYCGRG 1 cut(s) 212
AvaII GGWCC 1 cut(s) 16
BanI GGYRCC 1 cut(s) 669
BanII GRGCYC 2 cut(s) 219, 326
Bbv12I GWGCWC 2 cut(s) 219, 703
BbvCI CCTCAGC 1 cut(s) 173
BbvI GCAGC 1 cut(s) 164
BccI CCATC 2 cut(s) 626, 689
BceAI ACGGC 1 cut(s) 226
BcgI CGANNNNNNTGC 4 cut(s) 82, 116, 169, 203
BciT130I CCWGG 1 cut(s) 417
BciVI GTATCC 1 cut(s) 229
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 1 cut(s) 196
BfaI CTAG 1 cut(s) 227
BfmI CTRYAG 1 cut(s) 505
BfuI GTATCC 1 cut(s) 229
BisI GCNGC 3 cut(s) 153, 178, 779
BlpI GCTNAGC 1 cut(s) 275
BlsI GCNGC 3 cut(s) 154, 179, 780
Bme1390I CCNGG 2 cut(s) 300, 417
Bme18I GGWCC 1 cut(s) 16
BmeRI GACNNNNNGTC 1 cut(s) 188
BmeT110I CYCGRG 1 cut(s) 212
BmgT120I GGNCC 1 cut(s) 16
BmiI GGNNCC 3 cut(s) 325, 380, 671
BmrFI CCNGG 2 cut(s) 300, 417
BmrI ACTGGG 1 cut(s) 329
BmuI ACTGGG 1 cut(s) 329
BplI GAGNNNNNCTC 6 cut(s) 206, 238, 245, 277, 530, 562
Bpu10I CCTNAGC 1 cut(s) 173
Bpu1102I GCTNAGC 1 cut(s) 275
Bpu14I TTCGAA 1 cut(s) 92
BpuEI CTTGAG 2 cut(s) 47, 787
BpuMI CCSGG 1 cut(s) 300
BsaHI GRCGYC 2 cut(s) 201, 741
BsaJI CCNNGG 1 cut(s) 426
BsaWI WCCGGW 3 cut(s) 22, 600, 691
Bsc4I CCNNNNNNNGG 6 cut(s) 232, 248, 299, 389, 416, 589
Bse1I ACTGG 1 cut(s) 324
Bse3DI GCAATG 1 cut(s) 337
BseAI TCCGGA 2 cut(s) 600, 691
BseBI CCWGG 1 cut(s) 417
BseDI CCNNGG 1 cut(s) 426
BseGI GGATG 1 cut(s) 700
BseLI CCNNNNNNNGG 6 cut(s) 232, 248, 299, 389, 416, 589
BseMI GCAATG 1 cut(s) 337
BseMII CTCAG 3 cut(s) 187, 289, 774
BseNI ACTGG 1 cut(s) 324
BseRI GAGGAG 1 cut(s) 176
BseXI GCAGC 1 cut(s) 164
Bsh1236I CGCG 1 cut(s) 685
Bsh1285I CGRYCG 1 cut(s) 299
BshNI GGYRCC 1 cut(s) 669
BsiEI CGRYCG 1 cut(s) 299
BsiHKAI GWGCWC 2 cut(s) 219, 703
BsiHKCI CYCGRG 1 cut(s) 212
BsiSI CCGG 4 cut(s) 23, 299, 601, 692
BslFI GGGAC 1 cut(s) 52
BslI CCNNNNNNNGG 6 cut(s) 232, 248, 299, 389, 416, 589
BsmAI GTCTC 1 cut(s) 196
BsmBI CGTCTC 1 cut(s) 196
BsmFI GGGAC 1 cut(s) 52
BsmI GAATGC 1 cut(s) 612
BsoBI CYCGRG 1 cut(s) 212
Bsp119I TTCGAA 1 cut(s) 92
Bsp1286I GDGCHC 3 cut(s) 219, 326, 703
Bsp13I TCCGGA 2 cut(s) 600, 691
Bsp143I GATC 2 cut(s) 121, 412
Bsp1720I GCTNAGC 1 cut(s) 275
BspACI CCGC 4 cut(s) 178, 290, 471, 779
BspCNI CTCAG 3 cut(s) 186, 288, 775
BspEI TCCGGA 2 cut(s) 600, 691
BspFNI CGCG 1 cut(s) 685
BspHI TCATGA 1 cut(s) 726
BspLI GGNNCC 3 cut(s) 325, 380, 671
BspPI GGATC 2 cut(s) 116, 407
BspT104I TTCGAA 1 cut(s) 92
BspT107I GGYRCC 1 cut(s) 669
BsrDI GCAATG 1 cut(s) 337
BsrI ACTGG 1 cut(s) 324
BssECI CCNNGG 1 cut(s) 426
BssMI GATC 2 cut(s) 121, 412
BssNI GRCGYC 2 cut(s) 201, 741
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 1 cut(s) 417
Bst6I CTCTTC 1 cut(s) 21
BstACI GRCGYC 2 cut(s) 201, 741
BstBI TTCGAA 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 650
BstDEI CTNAG 3 cut(s) 173, 275, 783
BstENI CCTNNNNNAGG 1 cut(s) 414
BstF5I GGATG 1 cut(s) 700
BstFNI CGCG 1 cut(s) 685
BstKTI GATC 2 cut(s) 124, 415
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 2 cut(s) 121, 412
BstMCI CGRYCG 1 cut(s) 299
BstMWI GCNNNNNNNGC 1 cut(s) 787
BstNI CCWGG 1 cut(s) 417
BstSCI CCNGG 2 cut(s) 298, 415
BstSFI CTRYAG 1 cut(s) 505
BstUI CGCG 1 cut(s) 685
BstV1I GCAGC 1 cut(s) 164
BsuI GTATCC 1 cut(s) 229
BtsCI GGATG 1 cut(s) 700
BtsI GCAGTG 1 cut(s) 611
BtsIMutI CAGTG 2 cut(s) 611, 751
Cac8I GCNNGC 1 cut(s) 650
CciI TCATGA 1 cut(s) 726
Cfr13I GGNCC 1 cut(s) 16
CseI GACGC 2 cut(s) 209, 730
CviAII CATG 3 cut(s) 629, 727, 753
DdeI CTNAG 3 cut(s) 173, 275, 783
DpnI GATC 2 cut(s) 123, 414
DpnII GATC 2 cut(s) 121, 412
DriI GACNNNNNGTC 1 cut(s) 188
Eam1104I CTCTTC 1 cut(s) 21
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 21
EciI GGCGGA 1 cut(s) 460
Ecl136II GAGCTC 1 cut(s) 217
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 2 cut(s) 219, 326
Eco47I GGWCC 1 cut(s) 16
Eco53kI GAGCTC 1 cut(s) 217
Eco88I CYCGRG 1 cut(s) 212
EcoICRI GAGCTC 1 cut(s) 217
EcoNI CCTNNNNNAGG 1 cut(s) 414
EcoO109I RGGNCCY 1 cut(s) 16
EcoRI GAATTC 1 cut(s) 806
EcoRII CCWGG 1 cut(s) 415
EcoT14I CCWWGG 1 cut(s) 426
EcoT38I GRGCYC 2 cut(s) 219, 326
ErhI CCWWGG 1 cut(s) 426
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 3 cut(s) 632, 730, 756
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 1 cut(s) 52
FatI CATG 3 cut(s) 628, 726, 752
FauI CCCGC 1 cut(s) 297
FauNDI CATATG 1 cut(s) 563
Fnu4HI GCNGC 3 cut(s) 153, 178, 779
FokI GGATG 1 cut(s) 707
FriOI GRGCYC 2 cut(s) 219, 326
Fsp4HI GCNGC 3 cut(s) 153, 178, 779
FspBI CTAG 1 cut(s) 227
GluI GCNGC 3 cut(s) 153, 178, 779
HapII CCGG 4 cut(s) 23, 299, 601, 692
HgaI GACGC 2 cut(s) 209, 730
Hin1I GRCGYC 2 cut(s) 201, 741
Hin1II CATG 3 cut(s) 632, 730, 756
HindIII AAGCTT 1 cut(s) 650
HinfI GANTC 6 cut(s) 78, 183, 221, 393, 578, 707
HpaII CCGG 4 cut(s) 23, 299, 601, 692
HphI GGTGA 2 cut(s) 73, 530
Hpy188I TCNGA 2 cut(s) 77, 121
Hpy99I CGWCG 2 cut(s) 203, 247
HpyAV CCTTC 1 cut(s) 267
HpyCH4V TGCA 1 cut(s) 330
HpyF10VI GCNNNNNNNGC 1 cut(s) 787
HpyF3I CTNAG 3 cut(s) 173, 275, 783
Hsp92I GRCGYC 2 cut(s) 201, 741
Hsp92II CATG 3 cut(s) 632, 730, 756
Kpn2I TCCGGA 2 cut(s) 600, 691
Kzo9I GATC 2 cut(s) 121, 412
LmnI GCTCC 1 cut(s) 329
Lsp1109I GCAGC 1 cut(s) 164
MaeI CTAG 1 cut(s) 227
MaeIII GTNAC 1 cut(s) 310
MalI GATC 2 cut(s) 123, 414
MboI GATC 2 cut(s) 121, 412
MboII GAAGA 1 cut(s) 38
MhlI GDGCHC 3 cut(s) 219, 326, 703
MluCI AATT 5 cut(s) 128, 362, 404, 619, 806
MlyI GAGTC 3 cut(s) 177, 215, 701
MroI TCCGGA 2 cut(s) 600, 691
MroXI GAANNNNTTC 1 cut(s) 383
MseI TTAA 2 cut(s) 147, 773
MspI CCGG 4 cut(s) 23, 299, 601, 692
MspR9I CCNGG 2 cut(s) 300, 417
Mva1269I GAATGC 1 cut(s) 612
MvaI CCWGG 1 cut(s) 417
MvnI CGCG 1 cut(s) 685
MwoI GCNNNNNNNGC 1 cut(s) 787
NciI CCSGG 1 cut(s) 300
NdeI CATATG 1 cut(s) 563
NdeII GATC 2 cut(s) 121, 412
NlaIII CATG 3 cut(s) 632, 730, 756
NlaIV GGNNCC 3 cut(s) 325, 380, 671
NmuCI GTSAC 1 cut(s) 310
NspV TTCGAA 1 cut(s) 92
PaeR7I CTCGAG 1 cut(s) 212
PagI TCATGA 1 cut(s) 726
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PctI GAATGC 1 cut(s) 612
PdmI GAANNNNTTC 1 cut(s) 383
PfeI GAWTC 3 cut(s) 78, 393, 578
PflMI CCANNNNNTGG 1 cut(s) 389
PkrI GCNGC 3 cut(s) 154, 179, 780
PleI GAGTC 3 cut(s) 177, 215, 701
PpsI GAGTC 3 cut(s) 177, 215, 701
PpuMI RGGWCCY 1 cut(s) 16
Psp124BI GAGCTC 1 cut(s) 219
Psp5II RGGWCCY 1 cut(s) 16
Psp6I CCWGG 1 cut(s) 415
PspGI CCWGG 1 cut(s) 415
PspN4I GGNNCC 3 cut(s) 325, 380, 671
PspPI GGNCC 1 cut(s) 16
PspPPI RGGWCCY 1 cut(s) 16
PspXI VCTCGAGB 1 cut(s) 212
SacI GAGCTC 1 cut(s) 219
SaqAI TTAA 2 cut(s) 147, 773
SatI GCNGC 3 cut(s) 153, 178, 779
Sau3AI GATC 2 cut(s) 121, 412
Sau96I GGNCC 1 cut(s) 16
SchI GAGTC 3 cut(s) 177, 215, 701
ScrFI CCNGG 2 cut(s) 300, 417
SduI GDGCHC 3 cut(s) 219, 326, 703
SfcI CTRYAG 1 cut(s) 505
Sfr274I CTCGAG 1 cut(s) 212
SfuI TTCGAA 1 cut(s) 92
SinI GGWCC 1 cut(s) 16
SlaI CTCGAG 1 cut(s) 212
SmlI CTYRAG 3 cut(s) 62, 212, 766
SmoI CTYRAG 3 cut(s) 62, 212, 766
Sse9I AATT 5 cut(s) 128, 362, 404, 619, 806
SsiI CCGC 4 cut(s) 178, 290, 471, 779
SspMI CTAG 1 cut(s) 227
SstI GAGCTC 1 cut(s) 219
StyD4I CCNGG 2 cut(s) 298, 415
StyI CCWWGG 1 cut(s) 426
TaqI TCGA 6 cut(s) 92, 213, 219, 537, 551, 624
TasI AATT 5 cut(s) 128, 362, 404, 619, 806
TauI GCSGC 2 cut(s) 180, 781
TfiI GAWTC 3 cut(s) 78, 393, 578
Tru1I TTAA 2 cut(s) 147, 773
Tru9I TTAA 2 cut(s) 147, 773
TscAI CASTG 2 cut(s) 618, 751
TseFI GTSAC 1 cut(s) 310
TseI GCWGC 1 cut(s) 152
Tsp45I GTSAC 1 cut(s) 310
TspDTI ATGAA 1 cut(s) 376
TspGWI ACGGA 3 cut(s) 26, 76, 253
TspRI CASTG 2 cut(s) 618, 751
Van91I CCANNNNNTGG 1 cut(s) 389
VpaK11BI GGWCC 1 cut(s) 16
XagI CCTNNNNNAGG 1 cut(s) 414
XapI RAATTY 2 cut(s) 128, 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 808
XhoI CTCGAG 1 cut(s) 212
XmnI GAANNNNTTC 1 cut(s) 383
XspI CTAG 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.