FvH4_3g14941

Peptidase, trypsin-like serine and cysteine proteases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000082
Physical Location & Seq
Forward (+)
9246667 .. 9248056
1390 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14941.t1

Sequence Viewer

Length: 966 bp
ATGGCGGAAAGTGACCTCCCTGAAGATGTTATAGTGAATATTCTGTGTTGGCTGCCCGTGAAATCCTTGATCCGATTCACCTCCGTCTCGAAACGATGGCGTTTCATCATATTATCCGATCCCAAATTCGCCGCCTCTCAACTCAACAGAGCTCGTCAGCTGAAAGCCCTCGGTCCCCGACTCCTCTTCTGCACCGGCACCCCTCAGCTCGAATCCCTGGACTTGGCTGATATGGCGTCGTTTGGACACCCTTCCTCCGTCAGACACCTGAGCCTCCCTCCCGAGCGACCGGGCGGTGCCGTCACCCTAGTGGGCTCCTGCAACGGTTTGGTGTTTCTAGCCTTTGATACTTGCTACTTTTACACGTGGAACCCAGCAACCCGGTTGTTCGTGGAGTTGCCCGACCCAGGTTTTCCCGACGTCTGTCAATGGGTTACTTATCGCGGTGCTGGCTACTTGTCTGCCACCGACGACTACAGAGTTTTCGCAACCTGCTATGGGGTGTATTTTAATGAAGATGACGAGAGTTATATAGAGACGAAGATGTTCTCCTCCAGAGCTCAAGTTTGGAAAACAATCCGAGGCTCAGGTCACAAGTCCTCTCCTGATCAGGGGATTCTTTTGAATGAGGCACTCCATTGGGTCAATTTTGATGAAATCCTTGCCTTTGATTTTGCACCGGAGAAGTTCAGGACAATGCGTCTGCCTGATATAGACGACCAGTATGGTGTTGATTTTCGCTATGTTGGGGTTTCTGAGGGATGCCTGTGTGTTTGTGGTTATCTGAGCGGCCGTGATGACTCTGTCGATTTTTGGGTCATGAGAGAATATGGTGTGGAAAACTCGTGGACTAAGCTCTTTAACTTTTCCCATGGCGATCCTGGCCGGTACATAGAGTGGTGGGTTATGGAAAGTTGTACAGTTGCCGTAAAATGTGCTATTGTCCTGACTCCTGAGTACTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

322

Amino Acids

36.54

Weight (kDa)

4.97

Isoelectric Point (pI)

34.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 42 8.2e-11 F-box domain
F-box-like PF12937 4 - 40 7.9e-08 F-box-like
FBA_3 PF08268 100 - 285 7.8e-06 F-box associated beta propeller domain
FBA_1 PF07734 101 - 288 2.1e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 423
Acc36I ACCTGC 1 cut(s) 500
AccB1I GGYRCC 2 cut(s) 197, 296
AccBSI CCGCTC 1 cut(s) 789
AccII CGCG 1 cut(s) 444
AciI CCGC 5 cut(s) 5, 132, 294, 444, 789
AclWI GGATC 3 cut(s) 64, 113, 872
AcoI YGGCCR 2 cut(s) 790, 883
AcsI RAATTY 1 cut(s) 125
AcuI CTGAAG 1 cut(s) 42
AcvI CACGTG 1 cut(s) 366
AcyI GRCGYC 2 cut(s) 236, 420
AfaI GTAC 3 cut(s) 890, 919, 959
AfiI CCNNNNNNNGG 4 cut(s) 223, 407, 498, 611
AflIII ACRYGT 1 cut(s) 363
AgsI TTSAA 1 cut(s) 625
AhdI GACNNNNNGTC 1 cut(s) 699
AjnI CCWGG 3 cut(s) 216, 406, 880
AleI CACNNNNGTG 1 cut(s) 308
AluBI AGCT 5 cut(s) 152, 160, 208, 560, 856
AluI AGCT 5 cut(s) 152, 160, 208, 560, 856
Alw21I GWGCWC 2 cut(s) 154, 562
Alw26I GTCTC 2 cut(s) 91, 530
AlwI GGATC 3 cut(s) 64, 113, 872
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 2 cut(s) 790, 883
ApeKI GCWGC 1 cut(s) 52
ApoI RAATTY 1 cut(s) 125
Asp700I GAANNNNTTC 1 cut(s) 545
AspS9I GGNCC 1 cut(s) 173
AsuC2I CCSGG 2 cut(s) 291, 382
AsuHPI GGTGA 2 cut(s) 70, 295
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 1 cut(s) 173
BanI GGYRCC 2 cut(s) 197, 296
BanII GRGCYC 3 cut(s) 154, 317, 562
BauI CACGAG 1 cut(s) 844
BbrPI CACGTG 1 cut(s) 366
Bbv12I GWGCWC 2 cut(s) 154, 562
BbvCI CCTCAGC 1 cut(s) 204
BbvI GCAGC 1 cut(s) 39
BccI CCATC 1 cut(s) 90
BceAI ACGGC 3 cut(s) 284, 777, 911
BciT130I CCWGG 3 cut(s) 218, 408, 882
BclI TGATCA 1 cut(s) 607
BcnI CCSGG 2 cut(s) 291, 382
BcoDI GTCTC 2 cut(s) 91, 530
BfaI CTAG 2 cut(s) 308, 338
BfmI CTRYAG 1 cut(s) 475
BfuAI ACCTGC 1 cut(s) 500
BisI GCNGC 3 cut(s) 53, 132, 790
BlsI GCNGC 3 cut(s) 54, 133, 791
BmcAI AGTACT 1 cut(s) 959
Bme1390I CCNGG 5 cut(s) 218, 291, 382, 408, 882
Bme18I GGWCC 1 cut(s) 173
BmeRI GACNNNNNGTC 1 cut(s) 699
BmeT110I CYCGRG 1 cut(s) 281
BmgT120I GGNCC 1 cut(s) 173
BmiI GGNNCC 5 cut(s) 175, 199, 298, 316, 371
BmrFI CCNGG 5 cut(s) 218, 291, 382, 408, 882
BmsI GCATC 1 cut(s) 752
BoxI GACNNNNGTC 1 cut(s) 423
BplI GAGNNNNNCTC 2 cut(s) 262, 294
BpmI CTGGAG 1 cut(s) 538
Bpu10I CCTNAGC 3 cut(s) 204, 269, 586
BpuEI CTTGAG 1 cut(s) 546
BpuMI CCSGG 2 cut(s) 291, 382
BsaAI YACGTR 1 cut(s) 366
BsaHI GRCGYC 2 cut(s) 236, 420
BsaJI CCNNGG 5 cut(s) 169, 216, 406, 580, 871
BsaWI WCCGGW 1 cut(s) 679
BsaXI ACNNNNNCTCC 2 cut(s) 239, 269
Bsc4I CCNNNNNNNGG 4 cut(s) 223, 407, 498, 611
Bse118I RCCGGY 2 cut(s) 194, 885
Bse1I ACTGG 2 cut(s) 721, 965
BseBI CCWGG 3 cut(s) 218, 408, 882
BseDI CCNNGG 5 cut(s) 169, 216, 406, 580, 871
BseGI GGATG 1 cut(s) 767
BseLI CCNNNNNNNGG 4 cut(s) 223, 407, 498, 611
BseMII CTCAG 6 cut(s) 218, 260, 600, 747, 776, 945
BseNI ACTGG 2 cut(s) 721, 965
BseRI GAGGAG 2 cut(s) 173, 541
BseX3I CGGCCG 1 cut(s) 790
BseXI GCAGC 1 cut(s) 39
BseYI CCCAGC 1 cut(s) 373
BsgI GTGCAG 1 cut(s) 175
Bsh1236I CGCG 1 cut(s) 444
Bsh1285I CGRYCG 2 cut(s) 290, 793
BshFI GGCC 2 cut(s) 792, 885
BshNI GGYRCC 2 cut(s) 197, 296
BsiEI CGRYCG 2 cut(s) 290, 793
BsiHKAI GWGCWC 2 cut(s) 154, 562
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 5 cut(s) 195, 290, 382, 680, 886
BslFI GGGAC 1 cut(s) 159
BslI CCNNNNNNNGG 4 cut(s) 223, 407, 498, 611
BsmAI GTCTC 2 cut(s) 91, 530
BsmBI CGTCTC 2 cut(s) 91, 530
BsmFI GGGAC 1 cut(s) 159
BsnI GGCC 2 cut(s) 792, 885
BsoBI CYCGRG 1 cut(s) 281
Bsp1286I GDGCHC 3 cut(s) 154, 317, 562
Bsp1407I TGTACA 1 cut(s) 917
Bsp143I GATC 4 cut(s) 69, 118, 607, 877
Bsp19I CCATGG 1 cut(s) 871
BspACI CCGC 5 cut(s) 5, 132, 294, 444, 789
BspANI GGCC 2 cut(s) 792, 885
BspCNI CTCAG 6 cut(s) 217, 261, 599, 748, 777, 946
BspFNI CGCG 1 cut(s) 444
BspHI TCATGA 1 cut(s) 819
BspLI GGNNCC 5 cut(s) 175, 199, 298, 316, 371
BspMI ACCTGC 1 cut(s) 500
BspPI GGATC 3 cut(s) 64, 113, 872
BspT107I GGYRCC 2 cut(s) 197, 296
BsrBI CCGCTC 1 cut(s) 789
BsrFI RCCGGY 2 cut(s) 194, 885
BsrGI TGTACA 1 cut(s) 917
BsrI ACTGG 2 cut(s) 721, 965
BssAI RCCGGY 2 cut(s) 194, 885
BssECI CCNNGG 5 cut(s) 169, 216, 406, 580, 871
BssMI GATC 4 cut(s) 69, 118, 607, 877
BssNI GRCGYC 2 cut(s) 236, 420
BssSI CACGAG 1 cut(s) 844
BssT1I CCWWGG 1 cut(s) 871
Bst2BI CACGAG 1 cut(s) 844
Bst2UI CCWGG 3 cut(s) 218, 408, 882
Bst4CI ACNGT 2 cut(s) 326, 922
Bst6I CTCTTC 1 cut(s) 191
BstACI GRCGYC 2 cut(s) 236, 420
BstAUI TGTACA 1 cut(s) 917
BstBAI YACGTR 1 cut(s) 366
BstC8I GCNNGC 1 cut(s) 451
BstDEI CTNAG 7 cut(s) 204, 269, 586, 756, 785, 852, 954
BstDSI CCRYGG 1 cut(s) 871
BstF5I GGATG 1 cut(s) 767
BstFNI CGCG 1 cut(s) 444
BstKTI GATC 4 cut(s) 72, 121, 610, 880
BstMAI GTCTC 2 cut(s) 91, 530
BstMBI GATC 4 cut(s) 69, 118, 607, 877
BstMCI CGRYCG 2 cut(s) 290, 793
BstMWI GCNNNNNNNGC 3 cut(s) 233, 450, 882
BstNI CCWGG 3 cut(s) 218, 408, 882
BstPAI GACNNNNGTC 1 cut(s) 423
BstSCI CCNGG 5 cut(s) 216, 289, 380, 406, 880
BstSFI CTRYAG 1 cut(s) 475
BstUI CGCG 1 cut(s) 444
BstV1I GCAGC 1 cut(s) 39
BstZI CGGCCG 1 cut(s) 790
BsuRI GGCC 2 cut(s) 792, 885
BtgI CCRYGG 1 cut(s) 871
BtsCI GGATG 1 cut(s) 767
BveI ACCTGC 1 cut(s) 500
Cac8I GCNNGC 1 cut(s) 451
CciI TCATGA 1 cut(s) 819
Cfr10I RCCGGY 2 cut(s) 194, 885
Cfr13I GGNCC 1 cut(s) 173
CseI GACGC 2 cut(s) 225, 689
Csp6I GTAC 3 cut(s) 889, 918, 958
CviAII CATG 2 cut(s) 820, 872
CviQI GTAC 3 cut(s) 889, 918, 958
DdeI CTNAG 7 cut(s) 204, 269, 586, 756, 785, 852, 954
DpnI GATC 4 cut(s) 71, 120, 609, 879
DpnII GATC 4 cut(s) 69, 118, 607, 877
DriI GACNNNNNGTC 1 cut(s) 699
EaeI YGGCCR 2 cut(s) 790, 883
EagI CGGCCG 1 cut(s) 790
Eam1104I CTCTTC 1 cut(s) 191
Eam1105I GACNNNNNGTC 1 cut(s) 699
EarI CTCTTC 1 cut(s) 191
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 152, 560
EclXI CGGCCG 1 cut(s) 790
Eco130I CCWWGG 1 cut(s) 871
Eco24I GRGCYC 3 cut(s) 154, 317, 562
Eco47I GGWCC 1 cut(s) 173
Eco52I CGGCCG 1 cut(s) 790
Eco53kI GAGCTC 2 cut(s) 152, 560
Eco57I CTGAAG 1 cut(s) 42
Eco72I CACGTG 1 cut(s) 366
Eco88I CYCGRG 1 cut(s) 281
EcoICRI GAGCTC 2 cut(s) 152, 560
EcoRII CCWGG 3 cut(s) 216, 406, 880
EcoT14I CCWWGG 1 cut(s) 871
EcoT38I GRGCYC 3 cut(s) 154, 317, 562
ErhI CCWWGG 1 cut(s) 871
Esp3I CGTCTC 2 cut(s) 91, 530
FaeI CATG 2 cut(s) 823, 875
FaqI GGGAC 1 cut(s) 159
FatI CATG 2 cut(s) 819, 871
FbaI TGATCA 1 cut(s) 607
Fnu4HI GCNGC 3 cut(s) 53, 132, 790
FokI GGATG 1 cut(s) 774
FriOI GRGCYC 3 cut(s) 154, 317, 562
Fsp4HI GCNGC 3 cut(s) 53, 132, 790
FspBI CTAG 2 cut(s) 308, 338
GluI GCNGC 3 cut(s) 53, 132, 790
GsaI CCCAGC 1 cut(s) 377
GsuI CTGGAG 1 cut(s) 538
HaeIII GGCC 2 cut(s) 792, 885
HapII CCGG 5 cut(s) 195, 290, 382, 680, 886
HgaI GACGC 2 cut(s) 225, 689
Hin1I GRCGYC 2 cut(s) 236, 420
Hin1II CATG 2 cut(s) 823, 875
HinfI GANTC 6 cut(s) 75, 180, 212, 616, 800, 949
HpaII CCGG 5 cut(s) 195, 290, 382, 680, 886
HphI GGTGA 2 cut(s) 70, 295
Hpy166II GTNNAC 1 cut(s) 849
Hpy188I TCNGA 6 cut(s) 74, 118, 263, 581, 757, 786
Hpy188III TCNNGA 9 cut(s) 88, 281, 416, 555, 605, 691, 820, 946, 953
Hpy8I GTNNAC 1 cut(s) 849
Hpy99I CGWCG 3 cut(s) 241, 422, 473
HpyAV CCTTC 1 cut(s) 261
HpyCH4III ACNGT 2 cut(s) 326, 922
HpyCH4IV ACGT 2 cut(s) 365, 420
HpyCH4V TGCA 3 cut(s) 192, 321, 677
HpyF10VI GCNNNNNNNGC 3 cut(s) 233, 450, 882
HpyF3I CTNAG 7 cut(s) 204, 269, 586, 756, 785, 852, 954
HpySE526I ACGT 2 cut(s) 365, 420
Hsp92I GRCGYC 2 cut(s) 236, 420
Hsp92II CATG 2 cut(s) 823, 875
Ksp22I TGATCA 1 cut(s) 607
Kzo9I GATC 4 cut(s) 69, 118, 607, 877
LmnI GCTCC 1 cut(s) 320
Lsp1109I GCAGC 1 cut(s) 39
LweI GCATC 1 cut(s) 752
MaeI CTAG 2 cut(s) 308, 338
MaeII ACGT 2 cut(s) 365, 420
MaeIII GTNAC 4 cut(s) 11, 301, 433, 590
MalI GATC 4 cut(s) 71, 120, 609, 879
MbiI CCGCTC 1 cut(s) 789
MboI GATC 4 cut(s) 69, 118, 607, 877
MboII GAAGA 4 cut(s) 35, 178, 527, 553
MhlI GDGCHC 3 cut(s) 154, 317, 562
MluCI AATT 2 cut(s) 125, 646
MlyI GAGTC 3 cut(s) 174, 794, 943
MroXI GAANNNNTTC 1 cut(s) 545
MseI TTAA 2 cut(s) 510, 861
MslI CAYNNNNRTG 1 cut(s) 308
MspA1I CMGCKG 1 cut(s) 160
MspI CCGG 5 cut(s) 195, 290, 382, 680, 886
MspR9I CCNGG 5 cut(s) 218, 291, 382, 408, 882
MvaI CCWGG 3 cut(s) 218, 408, 882
MvnI CGCG 1 cut(s) 444
MwoI GCNNNNNNNGC 3 cut(s) 233, 450, 882
NciI CCSGG 2 cut(s) 291, 382
NcoI CCATGG 1 cut(s) 871
NdeII GATC 4 cut(s) 69, 118, 607, 877
NlaIII CATG 2 cut(s) 823, 875
NlaIV GGNNCC 5 cut(s) 175, 199, 298, 316, 371
NmuCI GTSAC 3 cut(s) 11, 301, 590
OliI CACNNNNGTG 1 cut(s) 308
PagI TCATGA 1 cut(s) 819
PdmI GAANNNNTTC 1 cut(s) 545
PfeI GAWTC 3 cut(s) 75, 212, 616
PflFI GACNNNGTC 1 cut(s) 803
PkrI GCNGC 3 cut(s) 54, 133, 791
PleI GAGTC 3 cut(s) 174, 794, 943
PmaCI CACGTG 1 cut(s) 366
PmlI CACGTG 1 cut(s) 366
PpsI GAGTC 3 cut(s) 174, 794, 943
Ppu21I YACGTR 1 cut(s) 366
PshAI GACNNNNGTC 1 cut(s) 423
Psp124BI GAGCTC 2 cut(s) 154, 562
Psp6I CCWGG 3 cut(s) 216, 406, 880
PspCI CACGTG 1 cut(s) 366
PspFI CCCAGC 1 cut(s) 373
PspGI CCWGG 3 cut(s) 216, 406, 880
PspN4I GGNNCC 5 cut(s) 175, 199, 298, 316, 371
PspPI GGNCC 1 cut(s) 173
PsyI GACNNNGTC 1 cut(s) 803
PvuII CAGCTG 1 cut(s) 160
RsaI GTAC 3 cut(s) 890, 919, 959
RsaNI GTAC 3 cut(s) 889, 918, 958
RseI CAYNNNNRTG 1 cut(s) 308
SacI GAGCTC 2 cut(s) 154, 562
SaqAI TTAA 2 cut(s) 510, 861
SatI GCNGC 3 cut(s) 53, 132, 790
Sau3AI GATC 4 cut(s) 69, 118, 607, 877
Sau96I GGNCC 1 cut(s) 173
ScaI AGTACT 1 cut(s) 959
SchI GAGTC 3 cut(s) 174, 794, 943
ScrFI CCNGG 5 cut(s) 218, 291, 382, 408, 882
SduI GDGCHC 3 cut(s) 154, 317, 562
SfaNI GCATC 1 cut(s) 752
SfcI CTRYAG 1 cut(s) 475
SinI GGWCC 1 cut(s) 173
SmiMI CAYNNNNRTG 1 cut(s) 308
SmlI CTYRAG 1 cut(s) 561
SmoI CTYRAG 1 cut(s) 561
Sse9I AATT 2 cut(s) 125, 646
SsiI CCGC 5 cut(s) 5, 132, 294, 444, 789
SspI AATATT 1 cut(s) 40
SspMI CTAG 2 cut(s) 308, 338
SstI GAGCTC 2 cut(s) 154, 562
StyD4I CCNGG 5 cut(s) 216, 289, 380, 406, 880
StyI CCWWGG 1 cut(s) 871
TaaI ACNGT 2 cut(s) 326, 922
TaiI ACGT 2 cut(s) 368, 423
TaqI TCGA 3 cut(s) 89, 210, 807
TaqII GACCGA 1 cut(s) 161
TasI AATT 2 cut(s) 125, 646
TatI WGTACW 2 cut(s) 917, 957
TauI GCSGC 2 cut(s) 134, 792
TfiI GAWTC 3 cut(s) 75, 212, 616
Tru1I TTAA 2 cut(s) 510, 861
Tru9I TTAA 2 cut(s) 510, 861
TseFI GTSAC 3 cut(s) 11, 301, 590
TseI GCWGC 1 cut(s) 52
Tsp45I GTSAC 3 cut(s) 11, 301, 590
TspDTI ATGAA 3 cut(s) 94, 528, 669
TspGWI ACGGA 2 cut(s) 73, 247
Tth111I GACNNNGTC 1 cut(s) 803
VpaK11BI GGWCC 1 cut(s) 173
XapI RAATTY 1 cut(s) 125
XcmI CCANNNNNNNNNTGG 1 cut(s) 878
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 2 cut(s) 308, 338
ZraI GACGTC 1 cut(s) 421
ZrmI AGTACT 1 cut(s) 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.