RchiOBHm_Chr2g0107821

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
19427088 .. 19430013
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48182

Sequence Viewer

Length: 1152 bp
ATGGCAGAAACAGAAGACCTACCGGAAGAGATTATAGTGAATATCTTTACTTGGTTACCCCTCAAGTCCTTGATCCGATTCACCTCCGTTTCGAAACGTCTGCGTTCCGTTATATTGTCCGATCCCAAATTCGCCCAATCCCAACTTAAAGCAGCTCGTCAGCAGAAAACCCTCAGCCGCAGACTCCTCGTCTCCACCAGCGCCCCTCGACTCGAGCTCGACTCCCTAGACTTGGATACGCCGTCGTTTGGAGAGCCTTCCTCCGTTAGAAAGCTCAGCTTCCCTTTCCCGCCACGACCGGGCGGTTATGTCACGCTACTGGGCTCCTGCAATGGTCTGGTATTTGTAGCTGTTGATGATAAATTGTTTTATATCTGGAACCCGTTCATTGGATTCTTGAAGCAATTACCCGATCCAGGTTTTCCCTTAGATGAACATTGGCTAGCCTATTATGGCGTTGGCTATTTATCTGCCACCGATGACTACAAAGTTTTGGTAGCCTCCTATCGCATTCGTGATTGGGAGATAGAGGTCGAGATGTTCTCATCGAGAACTCACATATGGCAGAGGATTGAATCCCCTCGCTTGCGCATCACTCCTGAACTCGATCTACTGGGTACTCCTTCGAATGATGCACTTCATTGGCTAAAATACGAGGACGACGAAATAGTTTCTTTTGACTTGCAAGAGGAGGTGTTCAGGAGAATGCCACTGCCTAATTTCGAGCATGATGGTAAGACCTTCGGCAAGCTTGGGGTTTGTGGAGGGTGCCTATGTGTATCGCGTTATCCGGATGGTGCTTTTGACTCTATTGATTTCTGGGTCATGAGAGAATATGCCGTCAGTGGCTCATGGATTATGCTCTTTACCTTAAAGCCGCCTGAGTTGCCCTTGTATTCCAGAGAATTCTTGGTTGTGGAAAGTTGTACGGTTGCCGCGGATTGGACTGGCGAGGGGTTCAAGTTGATGAGGATTGATCATAAAGAAGACAAGAAGCTTGGGCGGTATGTGGTTAAGGGGCTTCGCATTTGTATGGTTGAATACGAAGATAGTCTACTTTGGATTAGTGGTTGTCATTCAGGAATAAGAGATAGAGCAGGTCAAGATACTCGAAATCCATCAGAAGGCCTCAGGAAGCTGAAATGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

383

Amino Acids

44.0

Weight (kDa)

5.82

Isoelectric Point (pI)

49.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 3.9e-08 F-box-like
F-box PF00646 6 - 43 1.4e-09 F-box domain
FBA_3 PF08268 87 - 299 5.3e-11 F-box associated beta propeller domain
FBA_1 PF07734 108 - 312 1.4e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 590
Acc36I ACCTGC 1 cut(s) 1088
AccB1I GGYRCC 1 cut(s) 768
AccI GTMKAC 1 cut(s) 1054
AccII CGCG 2 cut(s) 784, 938
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 7 cut(s) 178, 290, 303, 878, 936, 938, 1003
AclWI GGATC 3 cut(s) 67, 116, 407
AcsI RAATTY 2 cut(s) 128, 905
AfaI GTAC 2 cut(s) 619, 928
AfiI CCNNNNNNNGG 7 cut(s) 232, 248, 299, 389, 416, 942, 1124
AgsI TTSAA 4 cut(s) 400, 575, 961, 1040
AhdI GACNNNNNGTC 1 cut(s) 188
AjnI CCWGG 1 cut(s) 415
AluBI AGCT 8 cut(s) 155, 217, 274, 279, 350, 751, 997, 1138
AluI AGCT 8 cut(s) 155, 217, 274, 279, 350, 751, 997, 1138
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 1 cut(s) 196
AlwI GGATC 3 cut(s) 67, 116, 407
Ama87I CYCGRG 1 cut(s) 212
Aor13HI TCCGGA 1 cut(s) 790
AoxI GGCC 1 cut(s) 1126
ApeKI GCWGC 1 cut(s) 152
ApoI RAATTY 2 cut(s) 128, 905
Asp700I GAANNNNTTC 1 cut(s) 383
AspLEI GCGC 2 cut(s) 203, 591
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 1 cut(s) 73
AsuII TTCGAA 2 cut(s) 92, 626
AsuNHI GCTAGC 1 cut(s) 442
AvaI CYCGRG 1 cut(s) 212
AxyI CCTNAGG 1 cut(s) 1130
BanI GGYRCC 1 cut(s) 768
BanII GRGCYC 2 cut(s) 219, 326
BarI GAAGNNNNNNTAC 2 cut(s) 1038, 1070
BbsI GAAGAC 2 cut(s) 21, 993
Bbv12I GWGCWC 1 cut(s) 219
BbvCI CCTCAGC 1 cut(s) 173
BbvI GCAGC 1 cut(s) 164
BccI CCATC 3 cut(s) 725, 788, 1126
BceAI ACGGC 2 cut(s) 226, 824
BcgI CGANNNNNNTGC 4 cut(s) 82, 116, 169, 203
BciT130I CCWGG 1 cut(s) 417
BciVI GTATCC 1 cut(s) 229
BclI TGATCA 1 cut(s) 976
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 1 cut(s) 196
BfaI CTAG 2 cut(s) 227, 443
BfoI RGCGCY 1 cut(s) 204
BfuAI ACCTGC 1 cut(s) 1088
BfuI GTATCC 1 cut(s) 229
BisI GCNGC 4 cut(s) 153, 178, 878, 936
BlpI GCTNAGC 1 cut(s) 275
BlsI GCNGC 4 cut(s) 154, 179, 879, 937
Bme1390I CCNGG 2 cut(s) 300, 417
BmeRI GACNNNNNGTC 1 cut(s) 188
BmeT110I CYCGRG 1 cut(s) 212
BmiI GGNNCC 3 cut(s) 325, 380, 770
BmrFI CCNGG 2 cut(s) 300, 417
BmrI ACTGGG 2 cut(s) 329, 623
BmsI GCATC 2 cut(s) 600, 622
BmtI GCTAGC 1 cut(s) 446
BmuI ACTGGG 2 cut(s) 329, 623
BpiI GAAGAC 2 cut(s) 21, 993
BplI GAGNNNNNCTC 6 cut(s) 206, 238, 245, 277, 527, 559
Bpu10I CCTNAGC 1 cut(s) 173
Bpu1102I GCTNAGC 1 cut(s) 275
Bpu14I TTCGAA 2 cut(s) 92, 626
BpuEI CTTGAG 1 cut(s) 47
BpuMI CCSGG 1 cut(s) 300
BsaJI CCNNGG 1 cut(s) 936
BsaWI WCCGGW 2 cut(s) 22, 790
Bsc4I CCNNNNNNNGG 7 cut(s) 232, 248, 299, 389, 416, 942, 1124
Bse1I ACTGG 3 cut(s) 324, 618, 952
Bse21I CCTNAGG 1 cut(s) 1130
Bse3DI GCAATG 1 cut(s) 337
BseAI TCCGGA 1 cut(s) 790
BseBI CCWGG 1 cut(s) 417
BseDI CCNNGG 1 cut(s) 936
BseGI GGATG 1 cut(s) 799
BseLI CCNNNNNNNGG 7 cut(s) 232, 248, 299, 389, 416, 942, 1124
BseMI GCAATG 1 cut(s) 337
BseMII CTCAG 4 cut(s) 187, 289, 873, 1144
BseNI ACTGG 3 cut(s) 324, 618, 952
BseRI GAGGAG 2 cut(s) 176, 704
BseXI GCAGC 1 cut(s) 164
Bsh1236I CGCG 2 cut(s) 784, 938
Bsh1285I CGRYCG 1 cut(s) 299
BshFI GGCC 1 cut(s) 1128
BshNI GGYRCC 1 cut(s) 768
BsiEI CGRYCG 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 219
BsiHKCI CYCGRG 1 cut(s) 212
BsiSI CCGG 3 cut(s) 23, 299, 791
BslI CCNNNNNNNGG 7 cut(s) 232, 248, 299, 389, 416, 942, 1124
BsmAI GTCTC 1 cut(s) 196
BsmBI CGTCTC 1 cut(s) 196
BsmI GAATGC 2 cut(s) 510, 711
BsnI GGCC 1 cut(s) 1128
BsoBI CYCGRG 1 cut(s) 212
Bsp119I TTCGAA 2 cut(s) 92, 626
Bsp1286I GDGCHC 2 cut(s) 219, 326
Bsp13I TCCGGA 1 cut(s) 790
Bsp143I GATC 5 cut(s) 72, 121, 412, 607, 976
Bsp1720I GCTNAGC 1 cut(s) 275
BspACI CCGC 7 cut(s) 178, 290, 303, 878, 936, 938, 1003
BspANI GGCC 1 cut(s) 1128
BspCNI CTCAG 4 cut(s) 186, 288, 874, 1143
BspEI TCCGGA 1 cut(s) 790
BspFNI CGCG 2 cut(s) 784, 938
BspHI TCATGA 1 cut(s) 825
BspLI GGNNCC 3 cut(s) 325, 380, 770
BspMI ACCTGC 1 cut(s) 1088
BspOI GCTAGC 1 cut(s) 446
BspPI GGATC 3 cut(s) 67, 116, 407
BspT104I TTCGAA 2 cut(s) 92, 626
BspT107I GGYRCC 1 cut(s) 768
BsrDI GCAATG 1 cut(s) 337
BsrI ACTGG 3 cut(s) 324, 618, 952
BssECI CCNNGG 1 cut(s) 936
BssMI GATC 5 cut(s) 72, 121, 412, 607, 976
Bst2UI CCWGG 1 cut(s) 417
Bst4CI ACNGT 1 cut(s) 931
Bst6I CTCTTC 1 cut(s) 21
BstBI TTCGAA 2 cut(s) 92, 626
BstC8I GCNNGC 3 cut(s) 444, 587, 749
BstDEI CTNAG 5 cut(s) 173, 275, 427, 882, 1130
BstDSI CCRYGG 1 cut(s) 936
BstEII GGTNACC 1 cut(s) 54
BstF5I GGATG 1 cut(s) 799
BstFNI CGCG 2 cut(s) 784, 938
BstH2I RGCGCY 1 cut(s) 204
BstHHI GCGC 2 cut(s) 203, 591
BstKTI GATC 5 cut(s) 75, 124, 415, 610, 979
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 5 cut(s) 72, 121, 412, 607, 976
BstMCI CGRYCG 1 cut(s) 299
BstMWI GCNNNNNNNGC 1 cut(s) 886
BstNI CCWGG 1 cut(s) 417
BstPI GGTNACC 1 cut(s) 54
BstSCI CCNGG 2 cut(s) 298, 415
BstUI CGCG 2 cut(s) 784, 938
BstV1I GCAGC 1 cut(s) 164
BstV2I GAAGAC 2 cut(s) 21, 993
Bsu36I CCTNAGG 1 cut(s) 1130
BsuI GTATCC 1 cut(s) 229
BsuRI GGCC 1 cut(s) 1128
BtgI CCRYGG 1 cut(s) 936
BtsCI GGATG 1 cut(s) 799
BtsI GCAGTG 1 cut(s) 710
BtsIMutI CAGTG 2 cut(s) 710, 850
BveI ACCTGC 1 cut(s) 1088
Cac8I GCNNGC 3 cut(s) 444, 587, 749
CciI TCATGA 1 cut(s) 825
CfoI GCGC 2 cut(s) 203, 591
Cfr42I CCGCGG 1 cut(s) 939
Csp6I GTAC 2 cut(s) 618, 927
CviAII CATG 3 cut(s) 728, 826, 852
CviQI GTAC 2 cut(s) 618, 927
DdeI CTNAG 5 cut(s) 173, 275, 427, 882, 1130
DpnI GATC 5 cut(s) 74, 123, 414, 609, 978
DpnII GATC 5 cut(s) 72, 121, 412, 607, 976
DriI GACNNNNNGTC 1 cut(s) 188
Eam1104I CTCTTC 1 cut(s) 21
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 21
Ecl136II GAGCTC 1 cut(s) 217
Eco147I AGGCCT 1 cut(s) 1128
Eco24I GRGCYC 2 cut(s) 219, 326
Eco53kI GAGCTC 1 cut(s) 217
Eco81I CCTNAGG 1 cut(s) 1130
Eco88I CYCGRG 1 cut(s) 212
Eco91I GGTNACC 1 cut(s) 54
EcoICRI GAGCTC 1 cut(s) 217
EcoO65I GGTNACC 1 cut(s) 54
EcoRI GAATTC 1 cut(s) 905
EcoRII CCWGG 1 cut(s) 415
EcoT38I GRGCYC 2 cut(s) 219, 326
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 3 cut(s) 731, 829, 855
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FatI CATG 3 cut(s) 727, 825, 851
FauI CCCGC 1 cut(s) 297
FauNDI CATATG 1 cut(s) 560
FbaI TGATCA 1 cut(s) 976
FblI GTMKAC 1 cut(s) 1054
Fnu4HI GCNGC 4 cut(s) 153, 178, 878, 936
FokI GGATG 1 cut(s) 806
FriOI GRGCYC 2 cut(s) 219, 326
Fsp4HI GCNGC 4 cut(s) 153, 178, 878, 936
FspBI CTAG 2 cut(s) 227, 443
FspI TGCGCA 1 cut(s) 590
GlaI GCGC 2 cut(s) 202, 590
GluI GCNGC 4 cut(s) 153, 178, 878, 936
HaeII RGCGCY 1 cut(s) 204
HaeIII GGCC 1 cut(s) 1128
HapII CCGG 3 cut(s) 23, 299, 791
HhaI GCGC 2 cut(s) 203, 591
Hin1II CATG 3 cut(s) 731, 829, 855
Hin6I GCGC 2 cut(s) 201, 589
HinP1I GCGC 2 cut(s) 201, 589
HindIII AAGCTT 2 cut(s) 749, 995
HinfI GANTC 7 cut(s) 78, 183, 210, 221, 393, 575, 806
HpaII CCGG 3 cut(s) 23, 299, 791
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 1055
Hpy188I TCNGA 3 cut(s) 77, 121, 1123
Hpy8I GTNNAC 1 cut(s) 1055
Hpy99I CGWCG 2 cut(s) 247, 665
HpyAV CCTTC 4 cut(s) 267, 633, 751, 1118
HpyCH4III ACNGT 1 cut(s) 931
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 3 cut(s) 330, 635, 685
HpyF10VI GCNNNNNNNGC 1 cut(s) 886
HpyF3I CTNAG 5 cut(s) 173, 275, 427, 882, 1130
HpySE526I ACGT 1 cut(s) 97
Hsp92II CATG 3 cut(s) 731, 829, 855
HspAI GCGC 2 cut(s) 201, 589
Kpn2I TCCGGA 1 cut(s) 790
Ksp22I TGATCA 1 cut(s) 976
KspI CCGCGG 1 cut(s) 939
Kzo9I GATC 5 cut(s) 72, 121, 412, 607, 976
LmnI GCTCC 1 cut(s) 329
Lsp1109I GCAGC 1 cut(s) 164
LweI GCATC 2 cut(s) 600, 622
MaeI CTAG 2 cut(s) 227, 443
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 2 cut(s) 54, 310
MalI GATC 5 cut(s) 74, 123, 414, 609, 978
MboI GATC 5 cut(s) 72, 121, 412, 607, 976
MboII GAAGA 4 cut(s) 26, 38, 998, 1058
MhlI GDGCHC 2 cut(s) 219, 326
MluCI AATT 5 cut(s) 128, 362, 404, 718, 905
MlyI GAGTC 4 cut(s) 177, 204, 215, 800
MroI TCCGGA 1 cut(s) 790
MroXI GAANNNNTTC 1 cut(s) 383
MseI TTAA 3 cut(s) 147, 872, 1014
MslI CAYNNNNRTG 1 cut(s) 1031
MspA1I CMGCKG 1 cut(s) 938
MspI CCGG 3 cut(s) 23, 299, 791
MspR9I CCNGG 2 cut(s) 300, 417
Mva1269I GAATGC 2 cut(s) 510, 711
MvaI CCWGG 1 cut(s) 417
MvnI CGCG 2 cut(s) 784, 938
MwoI GCNNNNNNNGC 1 cut(s) 886
NciI CCSGG 1 cut(s) 300
NdeI CATATG 1 cut(s) 560
NdeII GATC 5 cut(s) 72, 121, 412, 607, 976
NheI GCTAGC 1 cut(s) 442
NlaIII CATG 3 cut(s) 731, 829, 855
NlaIV GGNNCC 3 cut(s) 325, 380, 770
NmuCI GTSAC 1 cut(s) 310
NsbI TGCGCA 1 cut(s) 590
NspV TTCGAA 2 cut(s) 92, 626
PaeR7I CTCGAG 1 cut(s) 212
PagI TCATGA 1 cut(s) 825
PceI AGGCCT 1 cut(s) 1128
PcsI WCGNNNNNNNCGW 1 cut(s) 660
PctI GAATGC 2 cut(s) 510, 711
PdmI GAANNNNTTC 1 cut(s) 383
PfeI GAWTC 3 cut(s) 78, 393, 575
PkrI GCNGC 4 cut(s) 154, 179, 879, 937
PleI GAGTC 4 cut(s) 177, 204, 215, 800
PpsI GAGTC 4 cut(s) 177, 204, 215, 800
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 1 cut(s) 415
PspEI GGTNACC 1 cut(s) 54
PspGI CCWGG 1 cut(s) 415
PspN4I GGNNCC 3 cut(s) 325, 380, 770
PspXI VCTCGAGB 1 cut(s) 212
PsrI GAACNNNNNNTAC 2 cut(s) 594, 626
RsaI GTAC 2 cut(s) 619, 928
RsaNI GTAC 2 cut(s) 618, 927
RseI CAYNNNNRTG 1 cut(s) 1031
SacI GAGCTC 1 cut(s) 219
SacII CCGCGG 1 cut(s) 939
SaqAI TTAA 3 cut(s) 147, 872, 1014
SatI GCNGC 4 cut(s) 153, 178, 878, 936
Sau3AI GATC 5 cut(s) 72, 121, 412, 607, 976
SchI GAGTC 4 cut(s) 177, 204, 215, 800
ScrFI CCNGG 2 cut(s) 300, 417
SduI GDGCHC 2 cut(s) 219, 326
SfaNI GCATC 2 cut(s) 600, 622
Sfr274I CTCGAG 1 cut(s) 212
Sfr303I CCGCGG 1 cut(s) 939
SfuI TTCGAA 2 cut(s) 92, 626
SgrBI CCGCGG 1 cut(s) 939
SlaI CTCGAG 1 cut(s) 212
SmiMI CAYNNNNRTG 1 cut(s) 1031
SmlI CTYRAG 2 cut(s) 62, 212
SmoI CTYRAG 2 cut(s) 62, 212
Sse9I AATT 5 cut(s) 128, 362, 404, 718, 905
SseBI AGGCCT 1 cut(s) 1128
SsiI CCGC 7 cut(s) 178, 290, 303, 878, 936, 938, 1003
SspMI CTAG 2 cut(s) 227, 443
SstI GAGCTC 1 cut(s) 219
StuI AGGCCT 1 cut(s) 1128
StyD4I CCNGG 2 cut(s) 298, 415
TaaI ACNGT 1 cut(s) 931
TaiI ACGT 1 cut(s) 100
TasI AATT 5 cut(s) 128, 362, 404, 718, 905
TauI GCSGC 3 cut(s) 180, 880, 938
TfiI GAWTC 3 cut(s) 78, 393, 575
Tru1I TTAA 3 cut(s) 147, 872, 1014
Tru9I TTAA 3 cut(s) 147, 872, 1014
TscAI CASTG 2 cut(s) 717, 850
TseFI GTSAC 1 cut(s) 310
TseI GCWGC 1 cut(s) 152
Tsp45I GTSAC 1 cut(s) 310
TspDTI ATGAA 3 cut(s) 376, 447, 629
TspGWI ACGGA 3 cut(s) 76, 97, 253
TspRI CASTG 2 cut(s) 717, 850
XapI RAATTY 2 cut(s) 128, 905
XcmI CCANNNNNNNNNTGG 1 cut(s) 907
XhoI CTCGAG 1 cut(s) 212
XmiI GTMKAC 1 cut(s) 1054
XmnI GAANNNNTTC 1 cut(s) 383
XspI CTAG 2 cut(s) 227, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.