FvH4_1g17550

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000082
Physical Location & Seq
Reverse (-)
10215640 .. 10216809
1170 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g17550.t1

Sequence Viewer

Length: 1170 bp
ATGGCGGAAACAGAAGACCTACCCGAAGAGATCATACTAAACATCTTTTCCAGACTCCCCGTCAAGTCCTTGATCCGATTCACCTCCGTTTCTAAACGTCTGCATTTCATTATACTCTCCGATCCCAAATTCGCCCAATCACAACTCAAAGCAGCTCCTCGTCTCAGCCGCAGACTCCTGGTCTCCACCGACGCCCCACAACTGGAATCGCTACCCCTGGATGCTGATACGCCGTCGTTTGGAGACCCTTACTCCGTTAGAAAGCTCACTCTCCCTTTCCTGCACCAACCGGGCGGTTATGTCCAATTACTGGGCTCCTGCAATGGTCTGGTATTTCTATCTGTTGATAAGAAATTCTATTATGTCTGGAACCCATCACTTGGATTCGTCAAGAAATTACCCGAATCATATGTTTCCTTATCAAATAGAGAGTCAGAGTCAAATGTCTTTTATGGTGTGGGCTATTTATCCGCCACCGATGACTACACAGTGTTGGTAGCCTCCTACGACTTTACGGAGTTACAGCTAGATATCACTGAGGACATGTCTAGTATAGTCGAGATGTTCTCATTGAGAACTCACACTTGGGAGAGGATCGAGTCTTCTGTTGGCTTCAATGTTGAACCCTATTGTCAGGGGACTCTTGTGAACGATGCCCTTCATTGGCTAAATTTTTACGACGACGAGCAAGAAATAGTTTGTTTTGACTTGGCAGCAAAGGAGTTTCGGGGAATGTGGCTGCCCGATTTCAACAATGATGGTAAGAGTATCCGCAGTCTTGGGGTGTGTGAAGGGTGCCTGTTTGTGTCGCGTTATGCGGAGGGTGTTTGTGACTCTGTTGATTTGTGGGTCATGAGGGAATATGGTGTGAGTGACTCGTGGACTATGCTCTTTTGCTTAAAGGTACCTGATCCGCCTGTGTGGCGCGCGTTTGGGAGGAAATTATTGGTTGTGGAAAGTAGTACATTTGCTGTGAATTGGAGTGTCGAGGGGTGCCAGTTGATAAGGATTGATCATAAAGAAAACCGGAAGGTTGACCAGTATATGCTTAAGGGGATTTTGATGTGTATGGTTGAATATGAAGAGAGTCTACTTTGGATCAGTTGTTATCATCCAGTAGAACATACAGAGCAGGTACTTGAAACCCATCACAAGGCCTCACAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

390

Amino Acids

44.53

Weight (kDa)

4.95

Isoelectric Point (pI)

50.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 6.6e-09 F-box-like
F-box PF00646 6 - 43 6.8e-10 F-box domain
FBA_3 PF08268 93 - 294 6.1e-12 F-box associated beta propeller domain
FBA_1 PF07734 105 - 326 6.3e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1123
Acc65I GGTACC 1 cut(s) 904
AccB1I GGYRCC 3 cut(s) 795, 904, 993
AccB7I CCANNNNNTGG 2 cut(s) 310, 380
AccI GTMKAC 1 cut(s) 1090
AccII CGCG 3 cut(s) 811, 927, 929
AciI CCGC 7 cut(s) 5, 169, 294, 471, 772, 818, 914
AclWI GGATC 5 cut(s) 67, 116, 602, 905, 1106
AcsI RAATTY 3 cut(s) 128, 353, 670
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 3 cut(s) 906, 964, 1137
AfiI CCNNNNNNNGG 6 cut(s) 202, 239, 310, 380, 663, 1153
AflII CTTAAG 1 cut(s) 1049
AflIII ACRYGT 1 cut(s) 543
AgsI TTSAA 5 cut(s) 616, 623, 751, 1076, 1142
AhdI GACNNNNNGTC 2 cut(s) 59, 179
AjnI CCWGG 2 cut(s) 177, 216
AjuI GAANNNNNNNTTGG 2 cut(s) 568, 600
AluBI AGCT 4 cut(s) 155, 265, 526, 1167
AluI AGCT 4 cut(s) 155, 265, 526, 1167
Alw26I GTCTC 3 cut(s) 167, 187, 237
AlwI GGATC 5 cut(s) 67, 116, 602, 905, 1106
AoxI GGCC 1 cut(s) 1155
ApeKI GCWGC 3 cut(s) 152, 713, 739
ApoI RAATTY 3 cut(s) 128, 353, 670
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
Asp718I GGTACC 1 cut(s) 904
AspLEI GCGC 2 cut(s) 927, 929
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 1 cut(s) 73
BanI GGYRCC 3 cut(s) 795, 904, 993
BanII GRGCYC 1 cut(s) 317
BarI GAAGNNNNNNTAC 4 cut(s) 18, 50, 1074, 1106
BauI CACGAG 1 cut(s) 877
BbsI GAAGAC 2 cut(s) 21, 594
BbvI GCAGC 3 cut(s) 164, 725, 726
BccI CCATC 3 cut(s) 382, 752, 1155
BceAI ACGGC 1 cut(s) 217
BciT130I CCWGG 2 cut(s) 179, 218
BciVI GTATCC 1 cut(s) 779
BclI TGATCA 1 cut(s) 1012
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 3 cut(s) 167, 187, 237
BfaI CTAG 2 cut(s) 527, 549
BfrI CTTAAG 1 cut(s) 1049
BfuAI ACCTGC 1 cut(s) 1123
BfuI GTATCC 1 cut(s) 779
BglI GCCNNNNNGGC 1 cut(s) 922
BisI GCNGC 4 cut(s) 153, 169, 714, 740
BlsI GCNGC 4 cut(s) 154, 170, 715, 741
Bme1390I CCNGG 3 cut(s) 179, 218, 291
BmeRI GACNNNNNGTC 2 cut(s) 59, 179
BmiI GGNNCC 5 cut(s) 316, 371, 797, 906, 995
BmrFI CCNGG 3 cut(s) 179, 218, 291
BmrI ACTGGG 1 cut(s) 320
BmsI GCATC 2 cut(s) 211, 643
BmuI ACTGGG 1 cut(s) 320
BpiI GAAGAC 2 cut(s) 21, 594
BplI GAGNNNNNCTC 2 cut(s) 551, 583
BpuMI CCSGG 1 cut(s) 291
BsaHI GRCGYC 1 cut(s) 192
BsaI GGTCTC 2 cut(s) 187, 237
BsaJI CCNNGG 1 cut(s) 216
BsaWI WCCGGW 1 cut(s) 1026
BsaXI ACNNNNNCTCC 2 cut(s) 236, 266
Bsc4I CCNNNNNNNGG 6 cut(s) 202, 239, 310, 380, 663, 1153
Bse1I ACTGG 5 cut(s) 207, 315, 997, 1039, 1115
Bse3DI GCAATG 1 cut(s) 328
BseBI CCWGG 2 cut(s) 179, 218
BseDI CCNNGG 1 cut(s) 216
BseGI GGATG 2 cut(s) 226, 1111
BseLI CCNNNNNNNGG 6 cut(s) 202, 239, 310, 380, 663, 1153
BseMI GCAATG 1 cut(s) 328
BseMII CTCAG 2 cut(s) 178, 528
BseNI ACTGG 5 cut(s) 207, 315, 997, 1039, 1115
BsePI GCGCGC 1 cut(s) 925
BseRI GAGGAG 1 cut(s) 147
BseXI GCAGC 3 cut(s) 164, 725, 726
BsgI GTGCAG 1 cut(s) 266
Bsh1236I CGCG 3 cut(s) 811, 927, 929
BshFI GGCC 1 cut(s) 1157
BshNI GGYRCC 3 cut(s) 795, 904, 993
BsiSI CCGG 2 cut(s) 290, 1027
BslFI GGGAC 1 cut(s) 652
BslI CCNNNNNNNGG 6 cut(s) 202, 239, 310, 380, 663, 1153
BsmAI GTCTC 3 cut(s) 167, 187, 237
BsmBI CGTCTC 1 cut(s) 167
BsmFI GGGAC 1 cut(s) 652
BsnI GGCC 1 cut(s) 1157
Bso31I GGTCTC 2 cut(s) 187, 237
Bsp1286I GDGCHC 1 cut(s) 317
Bsp143I GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
BspACI CCGC 7 cut(s) 5, 169, 294, 471, 772, 818, 914
BspANI GGCC 1 cut(s) 1157
BspCNI CTCAG 2 cut(s) 177, 529
BspFNI CGCG 3 cut(s) 811, 927, 929
BspHI TCATGA 1 cut(s) 852
BspLI GGNNCC 5 cut(s) 316, 371, 797, 906, 995
BspMI ACCTGC 1 cut(s) 1123
BspPI GGATC 5 cut(s) 67, 116, 602, 905, 1106
BspT107I GGYRCC 3 cut(s) 795, 904, 993
BspTI CTTAAG 1 cut(s) 1049
BspTNI GGTCTC 2 cut(s) 187, 237
BsrDI GCAATG 1 cut(s) 328
BsrI ACTGG 5 cut(s) 207, 315, 997, 1039, 1115
BssECI CCNNGG 1 cut(s) 216
BssHII GCGCGC 1 cut(s) 925
BssMI GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
BssNI GRCGYC 1 cut(s) 192
BssSI CACGAG 1 cut(s) 877
Bst2BI CACGAG 1 cut(s) 877
Bst2UI CCWGG 2 cut(s) 179, 218
Bst4CI ACNGT 1 cut(s) 490
Bst6I CTCTTC 2 cut(s) 21, 1077
BstACI GRCGYC 1 cut(s) 192
BstAFI CTTAAG 1 cut(s) 1049
BstC8I GCNNGC 1 cut(s) 927
BstDEI CTNAG 2 cut(s) 164, 537
BstF5I GGATG 2 cut(s) 226, 1111
BstFNI CGCG 3 cut(s) 811, 927, 929
BstHHI GCGC 2 cut(s) 927, 929
BstKTI GATC 7 cut(s) 33, 75, 124, 597, 913, 1015, 1101
BstMAI GTCTC 3 cut(s) 167, 187, 237
BstMBI GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
BstMWI GCNNNNNNNGC 1 cut(s) 922
BstNI CCWGG 2 cut(s) 179, 218
BstNSI RCATGY 1 cut(s) 547
BstSCI CCNGG 3 cut(s) 177, 216, 289
BstUI CGCG 3 cut(s) 811, 927, 929
BstV1I GCAGC 3 cut(s) 164, 725, 726
BstV2I GAAGAC 2 cut(s) 21, 594
BsuI GTATCC 1 cut(s) 779
BsuRI GGCC 1 cut(s) 1157
BtsCI GGATG 2 cut(s) 226, 1111
BtsIMutI CAGTG 2 cut(s) 495, 534
BveI ACCTGC 1 cut(s) 1123
Cac8I GCNNGC 1 cut(s) 927
CciI TCATGA 1 cut(s) 852
CfoI GCGC 2 cut(s) 927, 929
CseI GACGC 1 cut(s) 200
Csp6I GTAC 3 cut(s) 905, 963, 1136
CviAII CATG 2 cut(s) 544, 853
CviQI GTAC 3 cut(s) 905, 963, 1136
DdeI CTNAG 2 cut(s) 164, 537
DpnI GATC 7 cut(s) 32, 74, 123, 596, 912, 1014, 1100
DpnII GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
DriI GACNNNNNGTC 2 cut(s) 59, 179
Eam1104I CTCTTC 2 cut(s) 21, 1077
Eam1105I GACNNNNNGTC 2 cut(s) 59, 179
EarI CTCTTC 2 cut(s) 21, 1077
EciI GGCGGA 3 cut(s) 20, 460, 903
Eco147I AGGCCT 1 cut(s) 1157
Eco24I GRGCYC 1 cut(s) 317
Eco31I GGTCTC 2 cut(s) 187, 237
Eco32I GATATC 1 cut(s) 532
EcoRII CCWGG 2 cut(s) 177, 216
EcoRV GATATC 1 cut(s) 532
EcoT38I GRGCYC 1 cut(s) 317
Esp3I CGTCTC 1 cut(s) 167
FaeI CATG 2 cut(s) 547, 856
FaqI GGGAC 1 cut(s) 652
FatI CATG 2 cut(s) 543, 852
FauNDI CATATG 1 cut(s) 409
FbaI TGATCA 1 cut(s) 1012
FblI GTMKAC 1 cut(s) 1090
Fnu4HI GCNGC 4 cut(s) 153, 169, 714, 740
FokI GGATG 2 cut(s) 233, 1098
FriOI GRGCYC 1 cut(s) 317
Fsp4HI GCNGC 4 cut(s) 153, 169, 714, 740
FspBI CTAG 2 cut(s) 527, 549
GlaI GCGC 2 cut(s) 926, 928
GluI GCNGC 4 cut(s) 153, 169, 714, 740
HaeIII GGCC 1 cut(s) 1157
HapII CCGG 2 cut(s) 290, 1027
HgaI GACGC 1 cut(s) 200
HhaI GCGC 2 cut(s) 927, 929
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 2 cut(s) 547, 856
Hin6I GCGC 2 cut(s) 925, 927
HinP1I GCGC 2 cut(s) 925, 927
HincII GTYRAC 1 cut(s) 1036
HindII GTYRAC 1 cut(s) 1036
HpaII CCGG 2 cut(s) 290, 1027
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 4 cut(s) 649, 882, 1036, 1091
Hpy188I TCNGA 3 cut(s) 77, 121, 436
Hpy188III TCNNGA 5 cut(s) 51, 367, 391, 559, 853
Hpy8I GTNNAC 4 cut(s) 649, 882, 1036, 1091
Hpy99I CGWCG 4 cut(s) 194, 238, 683, 686
HpyAV CCTTC 3 cut(s) 668, 785, 1024
HpyCH4III ACNGT 1 cut(s) 490
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 3 cut(s) 103, 283, 321
HpyF10VI GCNNNNNNNGC 1 cut(s) 922
HpyF3I CTNAG 2 cut(s) 164, 537
HpySE526I ACGT 1 cut(s) 97
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 2 cut(s) 547, 856
HspAI GCGC 2 cut(s) 925, 927
KpnI GGTACC 1 cut(s) 908
Ksp22I TGATCA 1 cut(s) 1012
Kzo9I GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
LmnI GCTCC 2 cut(s) 160, 320
Lsp1109I GCAGC 3 cut(s) 164, 725, 726
LweI GCATC 2 cut(s) 211, 643
MaeI CTAG 2 cut(s) 527, 549
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 3 cut(s) 519, 830, 872
MalI GATC 7 cut(s) 32, 74, 123, 596, 912, 1014, 1100
MboI GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
MboII GAAGA 4 cut(s) 26, 38, 594, 1094
MhlI GDGCHC 1 cut(s) 317
MluCI AATT 7 cut(s) 128, 305, 353, 395, 670, 941, 976
MlyI GAGTC 9 cut(s) 48, 168, 440, 446, 608, 634, 827, 869, 1096
MseI TTAA 2 cut(s) 899, 1050
MspCI CTTAAG 1 cut(s) 1049
MspI CCGG 2 cut(s) 290, 1027
MspR9I CCNGG 3 cut(s) 179, 218, 291
MvaI CCWGG 2 cut(s) 179, 218
MvnI CGCG 3 cut(s) 811, 927, 929
MwoI GCNNNNNNNGC 1 cut(s) 922
NciI CCSGG 1 cut(s) 291
NdeI CATATG 1 cut(s) 409
NdeII GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
NlaIII CATG 2 cut(s) 547, 856
NlaIV GGNNCC 5 cut(s) 316, 371, 797, 906, 995
NmuCI GTSAC 2 cut(s) 830, 872
NspI RCATGY 1 cut(s) 547
PagI TCATGA 1 cut(s) 852
PauI GCGCGC 1 cut(s) 925
PceI AGGCCT 1 cut(s) 1157
PciI ACATGT 1 cut(s) 543
PfeI GAWTC 4 cut(s) 78, 206, 384, 404
PflMI CCANNNNNTGG 2 cut(s) 310, 380
PkrI GCNGC 4 cut(s) 154, 170, 715, 741
PleI GAGTC 9 cut(s) 48, 168, 439, 445, 607, 634, 827, 869, 1095
PpsI GAGTC 9 cut(s) 48, 168, 439, 445, 607, 634, 827, 869, 1095
PscI ACATGT 1 cut(s) 543
Psp6I CCWGG 2 cut(s) 177, 216
PspGI CCWGG 2 cut(s) 177, 216
PspN4I GGNNCC 5 cut(s) 316, 371, 797, 906, 995
PteI GCGCGC 1 cut(s) 925
RsaI GTAC 3 cut(s) 906, 964, 1137
RsaNI GTAC 3 cut(s) 905, 963, 1136
SaqAI TTAA 2 cut(s) 899, 1050
SatI GCNGC 4 cut(s) 153, 169, 714, 740
Sau3AI GATC 7 cut(s) 30, 72, 121, 594, 910, 1012, 1098
SchI GAGTC 9 cut(s) 48, 168, 440, 446, 608, 634, 827, 869, 1096
ScrFI CCNGG 3 cut(s) 179, 218, 291
SduI GDGCHC 1 cut(s) 317
SfaNI GCATC 2 cut(s) 211, 643
SmlI CTYRAG 1 cut(s) 1049
SmoI CTYRAG 1 cut(s) 1049
Sse9I AATT 7 cut(s) 128, 305, 353, 395, 670, 941, 976
SseBI AGGCCT 1 cut(s) 1157
SsiI CCGC 7 cut(s) 5, 169, 294, 471, 772, 818, 914
SspMI CTAG 2 cut(s) 527, 549
StuI AGGCCT 1 cut(s) 1157
StyD4I CCNGG 3 cut(s) 177, 216, 289
TaaI ACNGT 1 cut(s) 490
TaiI ACGT 1 cut(s) 100
TaqI TCGA 3 cut(s) 558, 597, 987
TasI AATT 7 cut(s) 128, 305, 353, 395, 670, 941, 976
TatI WGTACW 1 cut(s) 962
TauI GCSGC 1 cut(s) 171
TfiI GAWTC 4 cut(s) 78, 206, 384, 404
Tru1I TTAA 2 cut(s) 899, 1050
Tru9I TTAA 2 cut(s) 899, 1050
TscAI CASTG 2 cut(s) 495, 541
TseFI GTSAC 2 cut(s) 830, 872
TseI GCWGC 3 cut(s) 152, 713, 739
Tsp45I GTSAC 2 cut(s) 830, 872
TspDTI ATGAA 3 cut(s) 97, 650, 1095
TspGWI ACGGA 3 cut(s) 76, 244, 530
TspRI CASTG 2 cut(s) 495, 541
Van91I CCANNNNNTGG 2 cut(s) 310, 380
Vha464I CTTAAG 1 cut(s) 1049
XapI RAATTY 3 cut(s) 128, 353, 670
XceI RCATGY 1 cut(s) 547
XmiI GTMKAC 1 cut(s) 1090
XspI CTAG 2 cut(s) 527, 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.