FvH4_1g18480

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000082
Physical Location & Seq
Reverse (-)
10794737 .. 10798278
3542 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g18480.t2

Sequence Viewer

Length: 1230 bp
ATGGCTTCTTCTTCAAAGGCAATTGCAACGACGGGTGAACGCCTCCCGAGTGATGTTACTCCGGAAATCCTTTATGGTCTGCCAGTGAAATCATTGATCAGATTCCGCTGCACCTCAACGGAATGGAATTCAGTTATCTCAGATCCCCAATTCGCCATATCCCATTTCAAGTTGGCTTCTCAGCGTAAGACCCTTACTCGAAGGCTCCTGCTCTCCACTTCCTCTCAGGTGCAATCCTTAGACGTCCAAACGTCGTCCTTTGGTGACGATTCTTCGGTGGCCAACCTCACCTGCCCATTCAAGCAACCAGGTCGTATCATGTACATGCTGGGCTCGTGCAATGGTATGGTCTTCGTATCTCTCCGTGATGATGATGGGATTGTTGGCTATTATATTTGGAACCCGTGTACTGCTCGGTTTCTGAAATTGCCTGACGTGGGTATTGACGAATCTGAACCAAGAGTTGGTTTCGGCTATGTATCTGCCACCGACGAGTACAAAGTTGTTGTCACCGCTTGTTCTAAGGGATACCGGTCTCTACATGTTTTCTCGTCGAGAGCCAACTCTTGGAAAATGATTGAAGCCCCTAGCCATTTAAATTGGATCCATCGGGTTACTACGGGGGTTCTTTCAAATGAGTCACTTCATTGGATCGGATATTTCGATTACGACGATGGTGAGGAGGATGAATATGGGAAGCAGATCATTGCTTTTGATTTAGCAGAAGAAGAATTTGTGGAAATAGCTTTGCCTTTGATTGATGTAGTGGGAGATAGCTTTAACCCAATTCAATTCTTCATAGATGATTTGGGAGGGTGTCTGTGTGTGTCTGCTTGTTATACAGAAAGGAATTTTGATCAATTTCAGTTCTGGGTGATGATGGAGTATGGCGTTTCTGAATCTTGGACTAAGGTGTTCCAGGTTAGCATGGTACTTGATAGGCTTTCAATTGAGCGACCGGTCTTCCATACAGAAAGTAGCATGGTTGTGTGGAGGTTTGAAGAAGATTGGTGTCCACAAGAGGGTGCGAATGCGGTGGTAAGGTTTGATCTTCTTAGTCTTCTACACAAGGATGTTGCGGGTTGTAGTGGTCAATATATGGTTGAGGCGGGTGAGTGTGATATGATACACTATGAAGAGACTCTTCTATGGCTTAATGACCCTCTTGGTGTGGAAGAAAATGTCAGGGTACTTGGAACCCAACAAGCAGGACTGAGAAGGAATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

410

Amino Acids

46.19

Weight (kDa)

4.7

Isoelectric Point (pI)

49.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 51 4.6e-07 F-box domain
FBA_1 PF07734 75 - 315 2.4e-17 F-box associated beta propeller domain
FBA_3 PF08268 83 - 305 9.3e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 299
AatII GACGTC 1 cut(s) 246
Acc36I ACCTGC 1 cut(s) 299
AccB7I CCANNNNNTGG 2 cut(s) 464, 567
AccIII TCCGGA 1 cut(s) 61
AciI CCGC 5 cut(s) 106, 513, 1034, 1079, 1109
AclWI GGATC 4 cut(s) 137, 598, 611, 659
AcoI YGGCCR 1 cut(s) 279
AcsI RAATTY 3 cut(s) 127, 731, 850
AcyI GRCGYC 1 cut(s) 243
AfaI GTAC 5 cut(s) 323, 409, 497, 933, 1191
AfiI CCNNNNNNNGG 4 cut(s) 437, 464, 567, 1022
AflIII ACRYGT 1 cut(s) 541
AgeI ACCGGT 2 cut(s) 531, 958
AgsI TTSAA 8 cut(s) 15, 169, 301, 581, 633, 791, 948, 1001
AjiI CACGTC 1 cut(s) 436
AjnI CCWGG 2 cut(s) 307, 918
AjuI GAANNNNNNNTTGG 2 cut(s) 447, 479
AluBI AGCT 2 cut(s) 746, 777
AluI AGCT 2 cut(s) 746, 777
Alw26I GTCTC 2 cut(s) 540, 1133
AlwI GGATC 4 cut(s) 137, 598, 611, 659
Ama87I CYCGRG 1 cut(s) 46
Aor13HI TCCGGA 1 cut(s) 61
AoxI GGCC 1 cut(s) 279
ApeKI GCWGC 1 cut(s) 108
ApoI RAATTY 3 cut(s) 127, 731, 850
ArsI GACNNNNNNTTYG 2 cut(s) 492, 524
AsiGI ACCGGT 2 cut(s) 531, 958
AsuHPI GGTGA 7 cut(s) 47, 275, 280, 502, 689, 886, 1124
AvaI CYCGRG 1 cut(s) 46
BalI TGGCCA 1 cut(s) 281
BamHI GGATCC 1 cut(s) 603
BanII GRGCYC 1 cut(s) 335
BauI CACGAG 1 cut(s) 334
BbsI GAAGAC 3 cut(s) 343, 955, 1052
BbvI GCAGC 1 cut(s) 95
BccI CCATC 4 cut(s) 368, 615, 668, 874
BcgI CGANNNNNNTGC 2 cut(s) 293, 327
BciT130I CCWGG 2 cut(s) 309, 920
BciVI GTATCC 1 cut(s) 521
BclI TGATCA 2 cut(s) 96, 856
BcoDI GTCTC 2 cut(s) 540, 1133
BfaI CTAG 1 cut(s) 588
BfuAI ACCTGC 1 cut(s) 299
BfuI GTATCC 1 cut(s) 521
BisI GCNGC 1 cut(s) 109
BlsI GCNGC 1 cut(s) 110
Bme1390I CCNGG 2 cut(s) 309, 920
BmeT110I CYCGRG 1 cut(s) 46
BmgBI CACGTC 1 cut(s) 436
BmiI GGNNCC 4 cut(s) 206, 401, 605, 1198
BmrFI CCNGG 2 cut(s) 309, 920
BpiI GAAGAC 3 cut(s) 343, 955, 1052
BsaHI GRCGYC 1 cut(s) 243
BsaI GGTCTC 1 cut(s) 540
BsaWI WCCGGW 3 cut(s) 61, 531, 958
Bsc4I CCNNNNNNNGG 4 cut(s) 437, 464, 567, 1022
Bse118I RCCGGY 2 cut(s) 531, 958
Bse1I ACTGG 1 cut(s) 83
Bse3DI GCAATG 2 cut(s) 346, 705
BseAI TCCGGA 1 cut(s) 61
BseBI CCWGG 2 cut(s) 309, 920
BseGI GGATG 2 cut(s) 691, 1078
BseLI CCNNNNNNNGG 4 cut(s) 437, 464, 567, 1022
BseMI GCAATG 2 cut(s) 346, 705
BseMII CTCAG 4 cut(s) 153, 194, 239, 1205
BseNI ACTGG 1 cut(s) 83
BseRI GAGGAG 1 cut(s) 695
BseXI GCAGC 1 cut(s) 95
BseYI CCCAGC 1 cut(s) 328
BsgI GTGCAG 1 cut(s) 94
Bsh1285I CGRYCG 1 cut(s) 959
BshFI GGCC 1 cut(s) 281
BshTI ACCGGT 2 cut(s) 531, 958
BsiEI CGRYCG 1 cut(s) 959
BsiHKCI CYCGRG 1 cut(s) 46
BsiSI CCGG 3 cut(s) 62, 532, 959
BslI CCNNNNNNNGG 4 cut(s) 437, 464, 567, 1022
BsmAI GTCTC 2 cut(s) 540, 1133
BsmI GAATGC 1 cut(s) 1036
BsnI GGCC 1 cut(s) 281
Bso31I GGTCTC 1 cut(s) 540
BsoBI CYCGRG 1 cut(s) 46
Bsp1286I GDGCHC 1 cut(s) 335
Bsp13I TCCGGA 1 cut(s) 61
Bsp1407I TGTACA 1 cut(s) 321
Bsp143I GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
BspACI CCGC 5 cut(s) 106, 513, 1034, 1079, 1109
BspANI GGCC 1 cut(s) 281
BspCNI CTCAG 4 cut(s) 152, 193, 238, 1206
BspEI TCCGGA 1 cut(s) 61
BspLI GGNNCC 4 cut(s) 206, 401, 605, 1198
BspMI ACCTGC 1 cut(s) 299
BspPI GGATC 4 cut(s) 137, 598, 611, 659
BspTNI GGTCTC 1 cut(s) 540
BsrDI GCAATG 2 cut(s) 346, 705
BsrFI RCCGGY 2 cut(s) 531, 958
BsrGI TGTACA 1 cut(s) 321
BsrI ACTGG 1 cut(s) 83
BssAI RCCGGY 2 cut(s) 531, 958
BssMI GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
BssNI GRCGYC 1 cut(s) 243
BssSI CACGAG 1 cut(s) 334
Bst2BI CACGAG 1 cut(s) 334
Bst2UI CCWGG 2 cut(s) 309, 920
Bst6I CTCTTC 2 cut(s) 1131, 1149
BstACI GRCGYC 1 cut(s) 243
BstAUI TGTACA 1 cut(s) 321
BstDEI CTNAG 8 cut(s) 139, 180, 225, 238, 522, 909, 1055, 1214
BstF5I GGATG 2 cut(s) 691, 1078
BstKTI GATC 7 cut(s) 99, 145, 606, 654, 705, 859, 1051
BstMAI GTCTC 2 cut(s) 540, 1133
BstMBI GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
BstMCI CGRYCG 1 cut(s) 959
BstNI CCWGG 2 cut(s) 309, 920
BstNSI RCATGY 2 cut(s) 328, 545
BstSCI CCNGG 2 cut(s) 307, 918
BstV1I GCAGC 1 cut(s) 95
BstV2I GAAGAC 3 cut(s) 343, 955, 1052
BstX2I RGATCY 2 cut(s) 142, 603
BstYI RGATCY 2 cut(s) 142, 603
BsuI GTATCC 1 cut(s) 521
BsuRI GGCC 1 cut(s) 281
BtrI CACGTC 1 cut(s) 436
BtsCI GGATG 2 cut(s) 691, 1078
BtsIMutI CAGTG 1 cut(s) 90
BveI ACCTGC 1 cut(s) 299
Cfr10I RCCGGY 2 cut(s) 531, 958
CsiI ACCWGGT 1 cut(s) 307
Csp6I GTAC 5 cut(s) 322, 408, 496, 932, 1190
CspAI ACCGGT 2 cut(s) 531, 958
CviAII CATG 5 cut(s) 319, 325, 542, 928, 982
CviQI GTAC 5 cut(s) 322, 408, 496, 932, 1190
DdeI CTNAG 8 cut(s) 139, 180, 225, 238, 522, 909, 1055, 1214
DpnI GATC 7 cut(s) 98, 144, 605, 653, 704, 858, 1050
DpnII GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
DraI TTTAAA 1 cut(s) 597
EaeI YGGCCR 1 cut(s) 279
Eam1104I CTCTTC 2 cut(s) 1131, 1149
EarI CTCTTC 2 cut(s) 1131, 1149
Eco24I GRGCYC 1 cut(s) 335
Eco31I GGTCTC 1 cut(s) 540
Eco88I CYCGRG 1 cut(s) 46
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 2 cut(s) 307, 918
EcoT38I GRGCYC 1 cut(s) 335
FaeI CATG 5 cut(s) 322, 328, 545, 931, 985
FalI AAGNNNNNCTT 2 cut(s) 1128, 1160
FatI CATG 5 cut(s) 318, 324, 541, 927, 981
FauI CCCGC 2 cut(s) 1072, 1102
FbaI TGATCA 2 cut(s) 96, 856
Fnu4HI GCNGC 1 cut(s) 109
FokI GGATG 2 cut(s) 698, 1085
FriOI GRGCYC 1 cut(s) 335
Fsp4HI GCNGC 1 cut(s) 109
FspBI CTAG 1 cut(s) 588
GluI GCNGC 1 cut(s) 109
GsaI CCCAGC 1 cut(s) 332
HaeIII GGCC 1 cut(s) 281
HapII CCGG 3 cut(s) 62, 532, 959
Hin1I GRCGYC 1 cut(s) 243
Hin1II CATG 5 cut(s) 322, 328, 545, 931, 985
HinfI GANTC 6 cut(s) 102, 269, 449, 638, 899, 1141
HpaII CCGG 3 cut(s) 62, 532, 959
HphI GGTGA 7 cut(s) 47, 275, 280, 502, 689, 886, 1124
Hpy166II GTNNAC 3 cut(s) 38, 408, 1016
Hpy188I TCNGA 6 cut(s) 101, 142, 423, 454, 656, 898
Hpy188III TCNNGA 3 cut(s) 46, 62, 555
Hpy8I GTNNAC 3 cut(s) 38, 408, 1016
Hpy99I CGWCG 5 cut(s) 34, 256, 494, 556, 674
HpyAV CCTTC 2 cut(s) 195, 1212
HpyCH4IV ACGT 3 cut(s) 243, 251, 435
HpyCH4V TGCA 4 cut(s) 26, 111, 232, 339
HpyF3I CTNAG 8 cut(s) 139, 180, 225, 238, 522, 909, 1055, 1214
HpySE526I ACGT 3 cut(s) 243, 251, 435
Hsp92I GRCGYC 1 cut(s) 243
Hsp92II CATG 5 cut(s) 322, 328, 545, 931, 985
Kpn2I TCCGGA 1 cut(s) 61
Ksp22I TGATCA 2 cut(s) 96, 856
Kzo9I GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
LmnI GCTCC 1 cut(s) 210
Lsp1109I GCAGC 1 cut(s) 95
MabI ACCWGGT 1 cut(s) 307
MaeI CTAG 1 cut(s) 588
MaeII ACGT 3 cut(s) 243, 251, 435
MaeIII GTNAC 5 cut(s) 55, 263, 508, 613, 639
MalI GATC 7 cut(s) 98, 144, 605, 653, 704, 858, 1050
MboI GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
MfeI CAATTG 2 cut(s) 21, 948
MflI RGATCY 2 cut(s) 142, 603
MhlI GDGCHC 1 cut(s) 335
MlsI TGGCCA 1 cut(s) 281
MluNI TGGCCA 1 cut(s) 281
MlyI GAGTC 2 cut(s) 647, 1135
Mox20I TGGCCA 1 cut(s) 281
MroI TCCGGA 1 cut(s) 61
MscI TGGCCA 1 cut(s) 281
MseI TTAA 3 cut(s) 596, 780, 1155
MslI CAYNNNNRTG 3 cut(s) 323, 986, 1071
Msp20I TGGCCA 1 cut(s) 281
MspA1I CMGCKG 1 cut(s) 108
MspI CCGG 3 cut(s) 62, 532, 959
MspR9I CCNGG 2 cut(s) 309, 920
MunI CAATTG 2 cut(s) 21, 948
Mva1269I GAATGC 1 cut(s) 1036
MvaI CCWGG 2 cut(s) 309, 920
NdeII GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
NlaIII CATG 5 cut(s) 322, 328, 545, 931, 985
NlaIV GGNNCC 4 cut(s) 206, 401, 605, 1198
NmuCI GTSAC 3 cut(s) 263, 508, 639
NspI RCATGY 2 cut(s) 328, 545
PaqCI CACCTGC 1 cut(s) 299
PciI ACATGT 1 cut(s) 541
PcsI WCGNNNNNNNCGW 2 cut(s) 660, 669
PctI GAATGC 1 cut(s) 1036
PfeI GAWTC 4 cut(s) 102, 269, 449, 899
PflMI CCANNNNNTGG 2 cut(s) 464, 567
PinAI ACCGGT 2 cut(s) 531, 958
PkrI GCNGC 1 cut(s) 110
PleI GAGTC 2 cut(s) 646, 1135
PpsI GAGTC 2 cut(s) 646, 1135
PscI ACATGT 1 cut(s) 541
Psp6I CCWGG 2 cut(s) 307, 918
PspFI CCCAGC 1 cut(s) 328
PspGI CCWGG 2 cut(s) 307, 918
PspN4I GGNNCC 4 cut(s) 206, 401, 605, 1198
PsuI RGATCY 2 cut(s) 142, 603
RsaI GTAC 5 cut(s) 323, 409, 497, 933, 1191
RsaNI GTAC 5 cut(s) 322, 408, 496, 932, 1190
RseI CAYNNNNRTG 3 cut(s) 323, 986, 1071
SaqAI TTAA 3 cut(s) 596, 780, 1155
SatI GCNGC 1 cut(s) 109
Sau3AI GATC 7 cut(s) 96, 142, 603, 651, 702, 856, 1048
SchI GAGTC 2 cut(s) 647, 1135
ScrFI CCNGG 2 cut(s) 309, 920
SduI GDGCHC 1 cut(s) 335
SexAI ACCWGGT 1 cut(s) 307
SmiI ATTTAAAT 1 cut(s) 597
SmiMI CAYNNNNRTG 3 cut(s) 323, 986, 1071
SsiI CCGC 5 cut(s) 106, 513, 1034, 1079, 1109
SspMI CTAG 1 cut(s) 588
StyD4I CCNGG 2 cut(s) 307, 918
SwaI ATTTAAAT 1 cut(s) 597
TaiI ACGT 3 cut(s) 246, 254, 438
TaqI TCGA 3 cut(s) 199, 554, 663
TatI WGTACW 3 cut(s) 321, 407, 495
TfiI GAWTC 4 cut(s) 102, 269, 449, 899
Tru1I TTAA 3 cut(s) 596, 780, 1155
Tru9I TTAA 3 cut(s) 596, 780, 1155
TscAI CASTG 1 cut(s) 90
TseFI GTSAC 3 cut(s) 263, 508, 639
TseI GCWGC 1 cut(s) 108
Tsp45I GTSAC 3 cut(s) 263, 508, 639
TspDTI ATGAA 4 cut(s) 635, 702, 787, 1149
TspGWI ACGGA 2 cut(s) 134, 353
TspRI CASTG 1 cut(s) 90
Van91I CCANNNNNTGG 2 cut(s) 464, 567
XapI RAATTY 3 cut(s) 127, 731, 850
XceI RCATGY 2 cut(s) 328, 545
XspI CTAG 1 cut(s) 588
ZraI GACGTC 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.