A Receptor for Ubiquitination Targets
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HMA | PF00403 | 224 - 276 | 4.5e-13 | Heavy-metal-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 75, 478, 521 |
| AcoI | YGGCCR | 1 cut(s) | 848 |
| AcuI | CTGAAG | 2 cut(s) | 381, 594 |
| AfaI | GTAC | 3 cut(s) | 169, 175, 346 |
| AgsI | TTSAA | 4 cut(s) | 45, 147, 270, 751 |
| AhlI | ACTAGT | 2 cut(s) | 161, 170 |
| AjnI | CCWGG | 2 cut(s) | 466, 657 |
| AluBI | AGCT | 5 cut(s) | 7, 41, 309, 429, 618 |
| AluI | AGCT | 5 cut(s) | 7, 41, 309, 429, 618 |
| Alw21I | GWGCWC | 1 cut(s) | 431 |
| Alw26I | GTCTC | 2 cut(s) | 549, 826 |
| AlwI | GGATC | 3 cut(s) | 75, 478, 521 |
| AoxI | GGCC | 2 cut(s) | 848, 906 |
| ApeKI | GCWGC | 1 cut(s) | 764 |
| AseI | ATTAAT | 1 cut(s) | 186 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 257 |
| AsuHPI | GGTGA | 3 cut(s) | 787, 841, 870 |
| BalI | TGGCCA | 1 cut(s) | 850 |
| BanII | GRGCYC | 1 cut(s) | 431 |
| Bbv12I | GWGCWC | 1 cut(s) | 431 |
| BbvI | GCAGC | 1 cut(s) | 776 |
| BccI | CCATC | 5 cut(s) | 122, 221, 240, 503, 877 |
| BciT130I | CCWGG | 2 cut(s) | 468, 659 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BcoDI | GTCTC | 2 cut(s) | 549, 826 |
| BcuI | ACTAGT | 2 cut(s) | 161, 170 |
| BfaI | CTAG | 3 cut(s) | 162, 171, 177 |
| BisI | GCNGC | 1 cut(s) | 765 |
| BlpI | GCTNAGC | 1 cut(s) | 435 |
| BlsI | GCNGC | 1 cut(s) | 766 |
| BmcAI | AGTACT | 3 cut(s) | 169, 175, 346 |
| Bme1390I | CCNGG | 2 cut(s) | 468, 659 |
| BmiI | GGNNCC | 1 cut(s) | 546 |
| BmrFI | CCNGG | 2 cut(s) | 468, 659 |
| BmrI | ACTGGG | 1 cut(s) | 794 |
| BmsI | GCATC | 3 cut(s) | 41, 727, 884 |
| BmuI | ACTGGG | 1 cut(s) | 794 |
| BpmI | CTGGAG | 1 cut(s) | 224 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 435 |
| Bsa29I | ATCGAT | 1 cut(s) | 117 |
| BsaBI | GATNNNNATC | 1 cut(s) | 525 |
| BsaWI | WCCGGW | 1 cut(s) | 529 |
| Bse1I | ACTGG | 3 cut(s) | 440, 548, 800 |
| Bse8I | GATNNNNATC | 1 cut(s) | 525 |
| BseBI | CCWGG | 2 cut(s) | 468, 659 |
| BseCI | ATCGAT | 1 cut(s) | 117 |
| BseGI | GGATG | 3 cut(s) | 32, 77, 473 |
| BseJI | GATNNNNATC | 1 cut(s) | 525 |
| BseMII | CTCAG | 3 cut(s) | 426, 701, 854 |
| BseNI | ACTGG | 3 cut(s) | 440, 548, 800 |
| BseRI | GAGGAG | 3 cut(s) | 73, 453, 636 |
| BseXI | GCAGC | 1 cut(s) | 776 |
| BsgI | GTGCAG | 1 cut(s) | 668 |
| Bsh1285I | CGRYCG | 1 cut(s) | 121 |
| BshFI | GGCC | 2 cut(s) | 850, 908 |
| BshVI | ATCGAT | 1 cut(s) | 117 |
| BsiEI | CGRYCG | 1 cut(s) | 121 |
| BsiHKAI | GWGCWC | 1 cut(s) | 431 |
| BsiSI | CCGG | 1 cut(s) | 530 |
| BslFI | GGGAC | 1 cut(s) | 386 |
| BsmAI | GTCTC | 2 cut(s) | 549, 826 |
| BsmFI | GGGAC | 1 cut(s) | 386 |
| BsmI | GAATGC | 1 cut(s) | 841 |
| BsnI | GGCC | 2 cut(s) | 850, 908 |
| Bsp1286I | GDGCHC | 1 cut(s) | 431 |
| Bsp143I | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 435 |
| BspANI | GGCC | 2 cut(s) | 850, 908 |
| BspCNI | CTCAG | 3 cut(s) | 427, 702, 853 |
| BspDI | ATCGAT | 1 cut(s) | 117 |
| BspLI | GGNNCC | 1 cut(s) | 546 |
| BspPI | GGATC | 3 cut(s) | 75, 478, 521 |
| BspQI | GCTCTTC | 3 cut(s) | 239, 419, 625 |
| BsrI | ACTGG | 3 cut(s) | 440, 548, 800 |
| BssMI | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| Bst2UI | CCWGG | 2 cut(s) | 468, 659 |
| Bst4CI | ACNGT | 4 cut(s) | 359, 369, 781, 856 |
| Bst6I | CTCTTC | 5 cut(s) | 239, 335, 400, 419, 625 |
| BstC8I | GCNNGC | 2 cut(s) | 616, 813 |
| BstDEI | CTNAG | 3 cut(s) | 435, 710, 840 |
| BstF5I | GGATG | 3 cut(s) | 32, 77, 473 |
| BstKTI | GATC | 7 cut(s) | 70, 121, 155, 286, 448, 473, 529 |
| BstMAI | GTCTC | 2 cut(s) | 549, 826 |
| BstMBI | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| BstMCI | CGRYCG | 1 cut(s) | 121 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 38, 47, 611, 881 |
| BstNI | CCWGG | 2 cut(s) | 468, 659 |
| BstSCI | CCNGG | 2 cut(s) | 466, 657 |
| BstV1I | GCAGC | 1 cut(s) | 776 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 104 |
| Bsu15I | ATCGAT | 1 cut(s) | 117 |
| BsuRI | GGCC | 2 cut(s) | 850, 908 |
| BsuTUI | ATCGAT | 1 cut(s) | 117 |
| BtsCI | GGATG | 3 cut(s) | 32, 77, 473 |
| BtsI | GCAGTG | 2 cut(s) | 680, 685 |
| BtsIMutI | CAGTG | 3 cut(s) | 680, 685, 807 |
| Cac8I | GCNNGC | 2 cut(s) | 616, 813 |
| ClaI | ATCGAT | 1 cut(s) | 117 |
| CsiI | ACCWGGT | 1 cut(s) | 657 |
| Csp6I | GTAC | 3 cut(s) | 168, 174, 345 |
| CviQI | GTAC | 3 cut(s) | 168, 174, 345 |
| DdeI | CTNAG | 3 cut(s) | 435, 710, 840 |
| DpnI | GATC | 7 cut(s) | 69, 120, 154, 285, 447, 472, 528 |
| DpnII | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| EaeI | YGGCCR | 1 cut(s) | 848 |
| Eam1104I | CTCTTC | 5 cut(s) | 239, 335, 400, 419, 625 |
| EarI | CTCTTC | 5 cut(s) | 239, 335, 400, 419, 625 |
| Ecl136II | GAGCTC | 1 cut(s) | 429 |
| Eco24I | GRGCYC | 1 cut(s) | 431 |
| Eco32I | GATATC | 1 cut(s) | 22 |
| Eco53kI | GAGCTC | 1 cut(s) | 429 |
| Eco57I | CTGAAG | 2 cut(s) | 381, 594 |
| EcoICRI | GAGCTC | 1 cut(s) | 429 |
| EcoRII | CCWGG | 2 cut(s) | 466, 657 |
| EcoRV | GATATC | 1 cut(s) | 22 |
| EcoT38I | GRGCYC | 1 cut(s) | 431 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 242, 274, 488, 520 |
| FaqI | GGGAC | 1 cut(s) | 386 |
| FauNDI | CATATG | 1 cut(s) | 53 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| Fnu4HI | GCNGC | 1 cut(s) | 765 |
| FokI | GGATG | 3 cut(s) | 19, 64, 460 |
| FriOI | GRGCYC | 1 cut(s) | 431 |
| Fsp4HI | GCNGC | 1 cut(s) | 765 |
| FspBI | CTAG | 3 cut(s) | 162, 171, 177 |
| GluI | GCNGC | 1 cut(s) | 765 |
| GsuI | CTGGAG | 1 cut(s) | 224 |
| HaeIII | GGCC | 2 cut(s) | 850, 908 |
| HapII | CCGG | 1 cut(s) | 530 |
| HindIII | AAGCTT | 2 cut(s) | 39, 307 |
| HinfI | GANTC | 2 cut(s) | 143, 599 |
| HpaII | CCGG | 1 cut(s) | 530 |
| HphI | GGTGA | 3 cut(s) | 787, 841, 870 |
| Hpy188I | TCNGA | 3 cut(s) | 288, 373, 520 |
| Hpy188III | TCNNGA | 4 cut(s) | 147, 241, 477, 726 |
| HpyAV | CCTTC | 4 cut(s) | 660, 695, 728, 766 |
| HpyCH4III | ACNGT | 4 cut(s) | 359, 369, 781, 856 |
| HpyCH4V | TGCA | 7 cut(s) | 32, 685, 690, 764, 815, 863, 875 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 38, 47, 611, 881 |
| HpyF3I | CTNAG | 3 cut(s) | 435, 710, 840 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| Kzo9I | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| LguI | GCTCTTC | 3 cut(s) | 239, 419, 625 |
| Lsp1109I | GCAGC | 1 cut(s) | 776 |
| LweI | GCATC | 3 cut(s) | 41, 727, 884 |
| MabI | ACCWGGT | 1 cut(s) | 657 |
| MaeI | CTAG | 3 cut(s) | 162, 171, 177 |
| MaeIII | GTNAC | 5 cut(s) | 491, 678, 739, 775, 793 |
| MalI | GATC | 7 cut(s) | 69, 120, 154, 285, 447, 472, 528 |
| MboI | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| MhlI | GDGCHC | 1 cut(s) | 431 |
| MlsI | TGGCCA | 1 cut(s) | 850 |
| MluCI | AATT | 2 cut(s) | 90, 913 |
| MluNI | TGGCCA | 1 cut(s) | 850 |
| MmeI | TCCRAC | 3 cut(s) | 121, 532, 678 |
| Mox20I | TGGCCA | 1 cut(s) | 850 |
| MroXI | GAANNNNTTC | 1 cut(s) | 257 |
| MscI | TGGCCA | 1 cut(s) | 850 |
| MseI | TTAA | 3 cut(s) | 186, 384, 916 |
| MslI | CAYNNNNRTG | 1 cut(s) | 578 |
| Msp20I | TGGCCA | 1 cut(s) | 850 |
| MspI | CCGG | 1 cut(s) | 530 |
| MspR9I | CCNGG | 2 cut(s) | 468, 659 |
| Mva1269I | GAATGC | 1 cut(s) | 841 |
| MvaI | CCWGG | 2 cut(s) | 468, 659 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 38, 47, 611, 881 |
| NdeI | CATATG | 1 cut(s) | 53 |
| NdeII | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| NlaIV | GGNNCC | 1 cut(s) | 546 |
| NmuCI | GTSAC | 4 cut(s) | 491, 678, 739, 775 |
| PciSI | GCTCTTC | 3 cut(s) | 239, 419, 625 |
| PctI | GAATGC | 1 cut(s) | 841 |
| PdmI | GAANNNNTTC | 1 cut(s) | 257 |
| PfeI | GAWTC | 2 cut(s) | 143, 599 |
| PfoI | TCCNGGA | 1 cut(s) | 466 |
| PkrI | GCNGC | 1 cut(s) | 766 |
| Ple19I | CGATCG | 1 cut(s) | 121 |
| PshBI | ATTAAT | 1 cut(s) | 186 |
| Psp124BI | GAGCTC | 1 cut(s) | 431 |
| Psp6I | CCWGG | 2 cut(s) | 466, 657 |
| PspGI | CCWGG | 2 cut(s) | 466, 657 |
| PspN4I | GGNNCC | 1 cut(s) | 546 |
| PvuI | CGATCG | 1 cut(s) | 121 |
| RsaI | GTAC | 3 cut(s) | 169, 175, 346 |
| RsaNI | GTAC | 3 cut(s) | 168, 174, 345 |
| RseI | CAYNNNNRTG | 1 cut(s) | 578 |
| SacI | GAGCTC | 1 cut(s) | 431 |
| SapI | GCTCTTC | 3 cut(s) | 239, 419, 625 |
| SaqAI | TTAA | 3 cut(s) | 186, 384, 916 |
| SatI | GCNGC | 1 cut(s) | 765 |
| Sau3AI | GATC | 7 cut(s) | 67, 118, 152, 283, 445, 470, 526 |
| ScaI | AGTACT | 3 cut(s) | 169, 175, 346 |
| ScrFI | CCNGG | 2 cut(s) | 468, 659 |
| SduI | GDGCHC | 1 cut(s) | 431 |
| SexAI | ACCWGGT | 1 cut(s) | 657 |
| SfaNI | GCATC | 3 cut(s) | 41, 727, 884 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 578 |
| SpeI | ACTAGT | 2 cut(s) | 161, 170 |
| Sse9I | AATT | 2 cut(s) | 90, 913 |
| SspMI | CTAG | 3 cut(s) | 162, 171, 177 |
| SstI | GAGCTC | 1 cut(s) | 431 |
| StyD4I | CCNGG | 2 cut(s) | 466, 657 |
| TaaI | ACNGT | 4 cut(s) | 359, 369, 781, 856 |
| TaqI | TCGA | 3 cut(s) | 109, 117, 507 |
| TasI | AATT | 2 cut(s) | 90, 913 |
| TatI | WGTACW | 3 cut(s) | 167, 173, 344 |
| TfiI | GAWTC | 2 cut(s) | 143, 599 |
| Tru1I | TTAA | 3 cut(s) | 186, 384, 916 |
| Tru9I | TTAA | 3 cut(s) | 186, 384, 916 |
| TscAI | CASTG | 3 cut(s) | 687, 692, 807 |
| TseFI | GTSAC | 4 cut(s) | 491, 678, 739, 775 |
| TseI | GCWGC | 1 cut(s) | 764 |
| Tsp45I | GTSAC | 4 cut(s) | 491, 678, 739, 775 |
| TspDTI | ATGAA | 3 cut(s) | 17, 596, 612 |
| TspRI | CASTG | 3 cut(s) | 687, 692, 807 |
| VspI | ATTAAT | 1 cut(s) | 186 |
| XmnI | GAANNNNTTC | 1 cut(s) | 257 |
| XspI | CTAG | 3 cut(s) | 162, 171, 177 |
| ZrmI | AGTACT | 3 cut(s) | 169, 175, 346 |