Rroxscaffold_2G00133980

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000082
Physical Location & Seq
Forward (+)
71479254 .. 71480462
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00133980.1

Sequence Viewer

Length: 1209 bp
ATGGAAGACCTCCCCATAGATATTTTGATGCAAATATTCGATAGGTTATCCCTGAAACTATTAATCCAATTCAGCTGCGCTTCAAAGCGATGGAGGTCCCTTGTCGTCTCAAATCCCCAGTTCGCCAAATCGTACTTCAAGCTGAAAAAACTCTTGCTCGCCACCTCTTCTCAATTCGAATCCCTAAACTTGGAAAAGTCGTCGTTTGGGGACTATTCTTCTGTCCGAAAGCTCAGCTGCCCATTCAAGCAACCGGCCTATGCCGTCAACATACTGGGCTCATGCAATGGTATGGTGTTTGTTGCAGTCAATTTTCATGATAGTTTTTATATCTGGAACCCCTCAACTGGGTTGTGCCGCAAATTGCCCAACCCAGGTTTTGCCTTGATTAATACAGACTTGGACTTATCAAAAACCATTATATGTCTCCACCATTGTGGTTTTGGCTATGTTTCTGCCACTGACGACTACAAAGTTGTTGTAGCCGCTCACATTATGAATTCAACCATGCCTCTAGAGATCTTTTCATCCAGAGCTGGCTCTTGGAGAAGGATTGAATGCCCTCCCCACTTTTCCCCATTGGCCTATATGAGTGGAACCAGGGGGACTTTTACTAATGAGGCGCTCCATTGGCTCCAAAAACTGCGTGAGCCAGAGCTAGACACTCCCGGAAACACCATCACTGCTTTTGATTTAGCCAAAGAAGAGTTTTGGCAAATGCCGCTGCCTTTTTTGGGAGAGACGAGTTCAGATAGGGATTGTTTTTTCAGTGATATAGGGGTTGTTTTTGGAGGGTGCCTGTGTGTATCGAGTTTTAAGAAGCAGAGATGCGGGGCCGGGCATGGTAATCAGTATGTTCAATTATGGGTCATGATGAAGTATGGTGTTTGTGATTCTTGGACCAAGCTGTTTAGGTTTGAGATGGACGATTTTAACCTTAGCCTACCAATCTGCTGCACAGAAAGAATGATAGTTATGTCGAGATACAGACGTCGGGATCTGGAGTTGATCAGGTTTGATCATGATGAAGAGAAGAAGCTTGACAATGTTGCGGTTTGCAGTAGTGGTCGATATACGCTTAAGATGGGTATCTGTGAAATGATAGATTATGATGAGACGCTACTTTGGCTTCCTGATTCTAGGGCTGAGGGAGGTGATCGAAAAGACACAAACCCAACAGAAGCAGAAATATTGAAGAGGAATAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

402

Amino Acids

45.92

Weight (kDa)

6.71

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 2 - 39 1.2e-09 F-box domain
F-box-like PF12937 2 - 38 7.8e-08 F-box-like
FBA_3 PF08268 61 - 293 3.1e-12 F-box associated beta propeller domain
FBA_1 PF07734 75 - 319 2.9e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 994
AccB1I GGYRCC 1 cut(s) 795
AccBSI CCGCTC 1 cut(s) 488
AciI CCGC 5 cut(s) 358, 486, 722, 831, 1052
AclWI GGATC 1 cut(s) 1005
AcsI RAATTY 1 cut(s) 499
AcyI GRCGYC 1 cut(s) 991
AfaI GTAC 1 cut(s) 134
AfiI CCNNNNNNNGG 5 cut(s) 190, 347, 348, 374, 734
AflII CTTAAG 1 cut(s) 1079
AgsI TTSAA 7 cut(s) 84, 139, 247, 504, 557, 860, 1195
AjnI CCWGG 2 cut(s) 373, 599
AjuI GAANNNNNNNTTGG 2 cut(s) 119, 151
AleI CACNNNNGTG 1 cut(s) 435
AluBI AGCT 8 cut(s) 75, 142, 232, 237, 536, 658, 907, 1039
AluI AGCT 8 cut(s) 75, 142, 232, 237, 536, 658, 907, 1039
Alw26I GTCTC 4 cut(s) 112, 431, 734, 1109
AlwI GGATC 1 cut(s) 1005
AoxI GGCC 3 cut(s) 255, 582, 834
ApeKI GCWGC 4 cut(s) 75, 237, 724, 954
ApoI RAATTY 1 cut(s) 499
AseI ATTAAT 2 cut(s) 62, 390
AspLEI GCGC 2 cut(s) 80, 625
AspS9I GGNCC 3 cut(s) 96, 834, 900
AsuC2I CCSGG 2 cut(s) 669, 838
AsuHPI GGTGA 1 cut(s) 1166
AsuII TTCGAA 1 cut(s) 177
AvaII GGWCC 2 cut(s) 96, 900
BaeI ACNNNNGTAYC 2 cut(s) 976, 1009
BanI GGYRCC 1 cut(s) 795
BanII GRGCYC 1 cut(s) 281
BbsI GAAGAC 1 cut(s) 12
BbvCI CCTCAGC 1 cut(s) 1146
BbvI GCAGC 4 cut(s) 62, 224, 711, 941
BccI CCATC 4 cut(s) 84, 686, 916, 1078
BceAI ACGGC 1 cut(s) 248
BciT130I CCWGG 2 cut(s) 375, 601
BclI TGATCA 2 cut(s) 1008, 1018
BcnI CCSGG 2 cut(s) 669, 838
BcoDI GTCTC 4 cut(s) 112, 431, 734, 1109
BfaI CTAG 3 cut(s) 515, 659, 1140
BfoI RGCGCY 1 cut(s) 626
BfrI CTTAAG 1 cut(s) 1079
BglII AGATCT 1 cut(s) 519
BisI GCNGC 7 cut(s) 76, 238, 358, 486, 722, 725, 955
BlpI GCTNAGC 1 cut(s) 233
BlsI GCNGC 7 cut(s) 77, 239, 359, 487, 723, 726, 956
Bme1390I CCNGG 4 cut(s) 375, 601, 669, 838
Bme18I GGWCC 2 cut(s) 96, 900
BmgT120I GGNCC 3 cut(s) 96, 834, 900
BmiI GGNNCC 6 cut(s) 98, 338, 598, 635, 797, 835
BmrFI CCNGG 4 cut(s) 375, 601, 669, 838
BmrI ACTGGG 3 cut(s) 112, 284, 357
BmsI GCATC 2 cut(s) 18, 818
BmuI ACTGGG 3 cut(s) 112, 284, 357
BpiI GAAGAC 1 cut(s) 12
BpmI CTGGAG 1 cut(s) 1022
Bpu10I CCTNAGC 2 cut(s) 938, 1146
Bpu1102I GCTNAGC 1 cut(s) 233
Bpu14I TTCGAA 1 cut(s) 177
BpuMI CCSGG 2 cut(s) 669, 838
BsaBI GATNNNNATC 1 cut(s) 1088
BsaHI GRCGYC 1 cut(s) 991
BsaJI CCNNGG 2 cut(s) 373, 600
Bsc4I CCNNNNNNNGG 5 cut(s) 190, 347, 348, 374, 734
Bse118I RCCGGY 1 cut(s) 253
Bse1I ACTGG 3 cut(s) 118, 279, 352
Bse3DI GCAATG 1 cut(s) 292
Bse8I GATNNNNATC 1 cut(s) 1088
BseBI CCWGG 2 cut(s) 375, 601
BseDI CCNNGG 2 cut(s) 373, 600
BseGI GGATG 1 cut(s) 527
BseJI GATNNNNATC 1 cut(s) 1088
BseLI CCNNNNNNNGG 5 cut(s) 190, 347, 348, 374, 734
BseMI GCAATG 1 cut(s) 292
BseMII CTCAG 2 cut(s) 247, 1137
BseNI ACTGG 3 cut(s) 118, 279, 352
BseXI GCAGC 4 cut(s) 62, 224, 711, 941
BsgI GTGCAG 1 cut(s) 940
BshFI GGCC 3 cut(s) 257, 584, 836
BshNI GGYRCC 1 cut(s) 795
BsiSI CCGG 3 cut(s) 254, 669, 837
BslFI GGGAC 3 cut(s) 82, 224, 619
BslI CCNNNNNNNGG 5 cut(s) 190, 347, 348, 374, 734
BsmAI GTCTC 4 cut(s) 112, 431, 734, 1109
BsmBI CGTCTC 3 cut(s) 112, 734, 1109
BsmFI GGGAC 3 cut(s) 82, 224, 619
BsmI GAATGC 1 cut(s) 563
BsnI GGCC 3 cut(s) 257, 584, 836
Bsp119I TTCGAA 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 281
Bsp143I GATC 5 cut(s) 519, 997, 1008, 1018, 1156
Bsp1720I GCTNAGC 1 cut(s) 233
BspACI CCGC 5 cut(s) 358, 486, 722, 831, 1052
BspANI GGCC 3 cut(s) 257, 584, 836
BspCNI CTCAG 2 cut(s) 246, 1138
BspHI TCATGA 3 cut(s) 316, 870, 1021
BspLI GGNNCC 6 cut(s) 98, 338, 598, 635, 797, 835
BspPI GGATC 1 cut(s) 1005
BspT104I TTCGAA 1 cut(s) 177
BspT107I GGYRCC 1 cut(s) 795
BspTI CTTAAG 1 cut(s) 1079
BsrBI CCGCTC 1 cut(s) 488
BsrDI GCAATG 1 cut(s) 292
BsrFI RCCGGY 1 cut(s) 253
BsrI ACTGG 3 cut(s) 118, 279, 352
BssAI RCCGGY 1 cut(s) 253
BssECI CCNNGG 2 cut(s) 373, 600
BssMI GATC 5 cut(s) 519, 997, 1008, 1018, 1156
BssNI GRCGYC 1 cut(s) 991
Bst2UI CCWGG 2 cut(s) 375, 601
Bst6I CTCTTC 4 cut(s) 172, 699, 1023, 1190
BstACI GRCGYC 1 cut(s) 991
BstAFI CTTAAG 1 cut(s) 1079
BstBI TTCGAA 1 cut(s) 177
BstC8I GCNNGC 2 cut(s) 159, 538
BstDEI CTNAG 3 cut(s) 233, 938, 1146
BstF5I GGATG 1 cut(s) 527
BstH2I RGCGCY 1 cut(s) 626
BstHHI GCGC 2 cut(s) 80, 625
BstKTI GATC 5 cut(s) 522, 1000, 1011, 1021, 1159
BstMAI GTCTC 4 cut(s) 112, 431, 734, 1109
BstMBI GATC 5 cut(s) 519, 997, 1008, 1018, 1156
BstMWI GCNNNNNNNGC 3 cut(s) 631, 721, 1126
BstNI CCWGG 2 cut(s) 375, 601
BstSCI CCNGG 4 cut(s) 373, 599, 667, 836
BstV1I GCAGC 4 cut(s) 62, 224, 711, 941
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 2 cut(s) 519, 997
BstXI CCANNNNNNTGG 1 cut(s) 437
BstYI RGATCY 2 cut(s) 519, 997
BsuRI GGCC 3 cut(s) 257, 584, 836
BtgZI GCGATG 1 cut(s) 103
BtsCI GGATG 1 cut(s) 527
BtsI GCAGTG 1 cut(s) 681
BtsIMutI CAGTG 3 cut(s) 459, 681, 775
Cac8I GCNNGC 2 cut(s) 159, 538
CciI TCATGA 3 cut(s) 316, 870, 1021
CfoI GCGC 2 cut(s) 80, 625
Cfr10I RCCGGY 1 cut(s) 253
Cfr13I GGNCC 3 cut(s) 96, 834, 900
CseI GACGC 1 cut(s) 1126
Csp6I GTAC 1 cut(s) 133
CviAII CATG 6 cut(s) 282, 317, 508, 842, 871, 1022
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 3 cut(s) 233, 938, 1146
DpnI GATC 5 cut(s) 521, 999, 1010, 1020, 1158
DpnII GATC 5 cut(s) 519, 997, 1008, 1018, 1156
Eam1104I CTCTTC 4 cut(s) 172, 699, 1023, 1190
EarI CTCTTC 4 cut(s) 172, 699, 1023, 1190
Eco24I GRGCYC 1 cut(s) 281
Eco47I GGWCC 2 cut(s) 96, 900
EcoO109I RGGNCCY 1 cut(s) 96
EcoRI GAATTC 1 cut(s) 499
EcoRII CCWGG 2 cut(s) 373, 599
EcoT38I GRGCYC 1 cut(s) 281
Esp3I CGTCTC 3 cut(s) 112, 734, 1109
FaeI CATG 6 cut(s) 285, 320, 511, 845, 874, 1025
FaqI GGGAC 3 cut(s) 82, 224, 619
FatI CATG 6 cut(s) 281, 316, 507, 841, 870, 1021
FauI CCCGC 1 cut(s) 824
FbaI TGATCA 2 cut(s) 1008, 1018
Fnu4HI GCNGC 7 cut(s) 76, 238, 358, 486, 722, 725, 955
FokI GGATG 1 cut(s) 514
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 7 cut(s) 76, 238, 358, 486, 722, 725, 955
FspBI CTAG 3 cut(s) 515, 659, 1140
GlaI GCGC 2 cut(s) 79, 624
GluI GCNGC 7 cut(s) 76, 238, 358, 486, 722, 725, 955
GsuI CTGGAG 1 cut(s) 1022
HaeII RGCGCY 1 cut(s) 626
HaeIII GGCC 3 cut(s) 257, 584, 836
HapII CCGG 3 cut(s) 254, 669, 837
HgaI GACGC 1 cut(s) 1126
HhaI GCGC 2 cut(s) 80, 625
Hin1I GRCGYC 1 cut(s) 991
Hin1II CATG 6 cut(s) 285, 320, 511, 845, 874, 1025
Hin6I GCGC 2 cut(s) 78, 623
HinP1I GCGC 2 cut(s) 78, 623
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HindIII AAGCTT 1 cut(s) 1037
HinfI GANTC 3 cut(s) 179, 893, 1136
HpaII CCGG 3 cut(s) 254, 669, 837
HphI GGTGA 1 cut(s) 1166
Hpy166II GTNNAC 1 cut(s) 268
Hpy188I TCNGA 2 cut(s) 227, 751
Hpy8I GTNNAC 1 cut(s) 268
Hpy99I CGWCG 2 cut(s) 205, 996
HpyAV CCTTC 1 cut(s) 543
HpyCH4IV ACGT 1 cut(s) 991
HpyCH4V TGCA 5 cut(s) 31, 285, 305, 957, 1059
HpyF10VI GCNNNNNNNGC 3 cut(s) 631, 721, 1126
HpyF3I CTNAG 3 cut(s) 233, 938, 1146
HpySE526I ACGT 1 cut(s) 991
Hsp92I GRCGYC 1 cut(s) 991
Hsp92II CATG 6 cut(s) 285, 320, 511, 845, 874, 1025
HspAI GCGC 2 cut(s) 78, 623
Ksp22I TGATCA 2 cut(s) 1008, 1018
Kzo9I GATC 5 cut(s) 519, 997, 1008, 1018, 1156
LmnI GCTCC 2 cut(s) 630, 639
Lsp1109I GCAGC 4 cut(s) 62, 224, 711, 941
LweI GCATC 2 cut(s) 18, 818
MaeI CTAG 3 cut(s) 515, 659, 1140
MaeII ACGT 1 cut(s) 991
MalI GATC 5 cut(s) 521, 999, 1010, 1020, 1158
MbiI CCGCTC 1 cut(s) 488
MboI GATC 5 cut(s) 519, 997, 1008, 1018, 1156
MboII GAAGA 7 cut(s) 17, 159, 210, 716, 1040, 1045, 1207
MflI RGATCY 2 cut(s) 519, 997
MhlI GDGCHC 1 cut(s) 281
MluCI AATT 7 cut(s) 68, 173, 310, 362, 499, 860, 1204
MseI TTAA 6 cut(s) 62, 390, 816, 933, 1080, 1207
MslI CAYNNNNRTG 1 cut(s) 435
MspA1I CMGCKG 3 cut(s) 75, 237, 724
MspCI CTTAAG 1 cut(s) 1079
MspI CCGG 3 cut(s) 254, 669, 837
MspR9I CCNGG 4 cut(s) 375, 601, 669, 838
Mva1269I GAATGC 1 cut(s) 563
MvaI CCWGG 2 cut(s) 375, 601
MwoI GCNNNNNNNGC 3 cut(s) 631, 721, 1126
NciI CCSGG 2 cut(s) 669, 838
NdeII GATC 5 cut(s) 519, 997, 1008, 1018, 1156
NlaIII CATG 6 cut(s) 285, 320, 511, 845, 874, 1025
NlaIV GGNNCC 6 cut(s) 98, 338, 598, 635, 797, 835
NspV TTCGAA 1 cut(s) 177
OliI CACNNNNGTG 1 cut(s) 435
PagI TCATGA 3 cut(s) 316, 870, 1021
PctI GAATGC 1 cut(s) 563
PfeI GAWTC 3 cut(s) 179, 893, 1136
PfoI TCCNGGA 1 cut(s) 667
PkrI GCNGC 7 cut(s) 77, 239, 359, 487, 723, 726, 956
PpuMI RGGWCCY 1 cut(s) 96
PshBI ATTAAT 2 cut(s) 62, 390
Psp5II RGGWCCY 1 cut(s) 96
Psp6I CCWGG 2 cut(s) 373, 599
PspGI CCWGG 2 cut(s) 373, 599
PspN4I GGNNCC 6 cut(s) 98, 338, 598, 635, 797, 835
PspPI GGNCC 3 cut(s) 96, 834, 900
PspPPI RGGWCCY 1 cut(s) 96
PsuI RGATCY 2 cut(s) 519, 997
PvuII CAGCTG 2 cut(s) 75, 237
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
RseI CAYNNNNRTG 1 cut(s) 435
SaqAI TTAA 6 cut(s) 62, 390, 816, 933, 1080, 1207
SatI GCNGC 7 cut(s) 76, 238, 358, 486, 722, 725, 955
Sau3AI GATC 5 cut(s) 519, 997, 1008, 1018, 1156
Sau96I GGNCC 3 cut(s) 96, 834, 900
ScrFI CCNGG 4 cut(s) 375, 601, 669, 838
SduI GDGCHC 1 cut(s) 281
SfaNI GCATC 2 cut(s) 18, 818
SfuI TTCGAA 1 cut(s) 177
SinI GGWCC 2 cut(s) 96, 900
SmiMI CAYNNNNRTG 1 cut(s) 435
SmlI CTYRAG 1 cut(s) 1079
SmoI CTYRAG 1 cut(s) 1079
Sse9I AATT 7 cut(s) 68, 173, 310, 362, 499, 860, 1204
SsiI CCGC 5 cut(s) 358, 486, 722, 831, 1052
SspI AATATT 2 cut(s) 36, 1191
SspMI CTAG 3 cut(s) 515, 659, 1140
StyD4I CCNGG 4 cut(s) 373, 599, 667, 836
TaiI ACGT 1 cut(s) 994
TaqI TCGA 6 cut(s) 39, 177, 809, 980, 1069, 1159
TasI AATT 7 cut(s) 68, 173, 310, 362, 499, 860, 1204
TauI GCSGC 3 cut(s) 360, 488, 724
TfiI GAWTC 3 cut(s) 179, 893, 1136
Tru1I TTAA 6 cut(s) 62, 390, 816, 933, 1080, 1207
Tru9I TTAA 6 cut(s) 62, 390, 816, 933, 1080, 1207
TscAI CASTG 3 cut(s) 466, 688, 775
TseI GCWGC 4 cut(s) 75, 237, 724, 954
TspDTI ATGAA 5 cut(s) 305, 512, 516, 890, 1041
TspRI CASTG 3 cut(s) 466, 688, 775
Vha464I CTTAAG 1 cut(s) 1079
VpaK11BI GGWCC 2 cut(s) 96, 900
VspI ATTAAT 2 cut(s) 62, 390
XapI RAATTY 1 cut(s) 499
XbaI TCTAGA 1 cut(s) 514
XcmI CCANNNNNNNNNTGG 1 cut(s) 440
XspI CTAG 3 cut(s) 515, 659, 1140
ZraI GACGTC 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.