FvH4_3g14940

Peptidase, trypsin-like serine and cysteine proteases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000082
Physical Location & Seq
Forward (+)
9239647 .. 9244149
4503 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14940.t1

Sequence Viewer

Length: 1071 bp
ATGGCGGAAACTGAACTACCTGAAGATGTGACGGTGAATATTCTGTGTTGGCTGCCCGTAAAATCCTTGATCCGGTTCACCTCCGTCTCGAAACGATGGCGTTTCATCATCTTGTCCGACCCCAAATTCGCATCATCTCAATTCAACGCAGCTCGTCAGCGGCGAACCTTCTGCACCGGCGCCCCTCAGCTCGAATCCCTAGACGTGGATGGCACGGCGTCGTTTGGACACCCTTCCTCCGTCAGAAAGCTAAGCCTCCCTCTCGAGCGACGGGGAAGCCGTGACGTCACCCTACTGGGCTCCTGCAACGGTTTGGTGTTTCTAGCCTTTGATTCTTGTTACTTTTACATCTGGAACCCGGCAACCCGATTCTTCAGGGAGTTGCCCGACCCAGGTTTTCCCGACCACGTCTGTCAAGTGCTGACGTATGGTGGTGTTGGGTACTTGTCTGCCACCGAAGACTACAAAGTTTTCGCAACCTCATATGGGTTGTATCCAGATGGAGACTCGTATGTAGACACAGCACAGACTAAGATGTTCTCCTACAGAGCTCACTTTTGGAAAACAGTACGAGGCTCAGCTCATTACAAGTGCTTTGCTAAGGGGATTCTTTTGAATGAGGCACTTCATTGGGCCAAGTCGAATGAAATCATTGCTTTCGATTTCGCACCTGAGAAGTTCAGGACAATGCGTATGCCTGATGTAGACGACCAAAATGATGTTGCCTTTGGCTATGTTGGGGTCTCTGAGGGATGCCTGTGTGTATGTGGTTATCTGCGCGGCGGTCATGACTCTGTTGATTACTGGGTCATGAGAGAATATGGCGTGGATAGCTCGTGGACTAAGCTCTTTAACATTTCCTCTGCCGGTCCTGGCCGGTACGGAGATTGGTTGGTTATGGAAAGCTGTACAGTTGCAGTAAAAGGGGCTATTGGTTTCCACCACTGGTTGTTGGTAGAGATTGATCATCAACAAAAAGCGGCGAATGGCGTCTACACGGTTCCAGGCATCATTAACTGCTACCCTAGCATGATTCCATATGAGGACACTCTACTTCGGATTAATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

357

Amino Acids

40.12

Weight (kDa)

6.0

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 42 2.5e-09 F-box domain
F-box-like PF12937 5 - 40 3.6e-07 F-box-like
FBA_1 PF07734 93 - 285 1.8e-13 F-box associated beta propeller domain
FBA_3 PF08268 95 - 283 5.2e-07 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 288
AccB1I GGYRCC 1 cut(s) 179
AccI GTMKAC 3 cut(s) 516, 705, 993
AccII CGCG 1 cut(s) 780
AciI CCGC 5 cut(s) 5, 160, 780, 783, 980
AclWI GGATC 1 cut(s) 64
AcoI YGGCCR 1 cut(s) 874
AcsI RAATTY 1 cut(s) 125
AcuI CTGAAG 2 cut(s) 42, 358
AcyI GRCGYC 4 cut(s) 180, 218, 285, 990
AfaI GTAC 4 cut(s) 443, 570, 881, 910
AfiI CCNNNNNNNGG 4 cut(s) 72, 205, 392, 486
AgsI TTSAA 2 cut(s) 145, 616
AjiI CACGTC 2 cut(s) 205, 409
AjnI CCWGG 3 cut(s) 391, 871, 1003
AluBI AGCT 8 cut(s) 152, 190, 250, 551, 581, 834, 847, 906
AluI AGCT 8 cut(s) 152, 190, 250, 551, 581, 834, 847, 906
Alw21I GWGCWC 1 cut(s) 553
Alw26I GTCTC 3 cut(s) 91, 498, 748
AlwI GGATC 1 cut(s) 64
Ama87I CYCGRG 1 cut(s) 263
AoxI GGCC 2 cut(s) 633, 874
ApeKI GCWGC 2 cut(s) 52, 149
ApoI RAATTY 1 cut(s) 125
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AseI ATTAAT 1 cut(s) 1062
AspLEI GCGC 2 cut(s) 182, 780
AspS9I GGNCC 2 cut(s) 633, 869
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 3 cut(s) 46, 70, 280
AvaI CYCGRG 1 cut(s) 263
AvaII GGWCC 1 cut(s) 869
BanI GGYRCC 1 cut(s) 179
BanII GRGCYC 2 cut(s) 302, 553
BauI CACGAG 1 cut(s) 835
BbsI GAAGAC 1 cut(s) 465
Bbv12I GWGCWC 1 cut(s) 553
BbvCI CCTCAGC 1 cut(s) 186
BbvI GCAGC 2 cut(s) 39, 161
BccI CCATC 3 cut(s) 90, 203, 494
BceAI ACGGC 2 cut(s) 231, 264
BcgI CGANNNNNNTGC 2 cut(s) 153, 187
BciT130I CCWGG 3 cut(s) 393, 873, 1005
BciVI GTATCC 1 cut(s) 504
BclI TGATCA 1 cut(s) 964
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 3 cut(s) 91, 498, 748
BfaI CTAG 3 cut(s) 200, 323, 1026
BfmI CTRYAG 1 cut(s) 544
BfoI RGCGCY 1 cut(s) 183
BfuI GTATCC 1 cut(s) 504
BisI GCNGC 5 cut(s) 53, 150, 161, 781, 981
BlpI GCTNAGC 2 cut(s) 251, 577
BlsI GCNGC 5 cut(s) 54, 151, 162, 782, 982
Bme1390I CCNGG 4 cut(s) 359, 393, 873, 1005
Bme18I GGWCC 1 cut(s) 869
BmeT110I CYCGRG 1 cut(s) 263
BmgBI CACGTC 2 cut(s) 205, 409
BmgT120I GGNCC 2 cut(s) 633, 869
BmiI GGNNCC 4 cut(s) 181, 301, 356, 1002
BmrFI CCNGG 4 cut(s) 359, 393, 873, 1005
BmrI ACTGGG 2 cut(s) 305, 814
BmsI GCATC 3 cut(s) 140, 743, 1017
BmuI ACTGGG 2 cut(s) 305, 814
BpiI GAAGAC 1 cut(s) 465
Bpu10I CCTNAGC 2 cut(s) 186, 600
Bpu1102I GCTNAGC 2 cut(s) 251, 577
BpuMI CCSGG 1 cut(s) 359
BsaHI GRCGYC 4 cut(s) 180, 218, 285, 990
BsaI GGTCTC 1 cut(s) 748
BsaJI CCNNGG 1 cut(s) 391
BsaWI WCCGGW 1 cut(s) 72
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 205, 392, 486
Bse118I RCCGGY 3 cut(s) 176, 866, 876
Bse1I ACTGG 3 cut(s) 300, 809, 950
Bse3DI GCAATG 1 cut(s) 651
BseBI CCWGG 3 cut(s) 393, 873, 1005
BseDI CCNNGG 1 cut(s) 391
BseGI GGATG 2 cut(s) 214, 758
BseLI CCNNNNNNNGG 4 cut(s) 72, 205, 392, 486
BseMI GCAATG 1 cut(s) 651
BseMII CTCAG 4 cut(s) 200, 591, 663, 738
BseNI ACTGG 3 cut(s) 300, 809, 950
BseXI GCAGC 2 cut(s) 39, 161
BsgI GTGCAG 1 cut(s) 157
Bsh1236I CGCG 1 cut(s) 780
BshFI GGCC 2 cut(s) 635, 876
BshNI GGYRCC 1 cut(s) 179
BsiHKAI GWGCWC 1 cut(s) 553
BsiHKCI CYCGRG 1 cut(s) 263
BsiSI CCGG 5 cut(s) 73, 177, 359, 867, 877
BslI CCNNNNNNNGG 4 cut(s) 72, 205, 392, 486
BsmAI GTCTC 3 cut(s) 91, 498, 748
BsmBI CGTCTC 1 cut(s) 91
BsnI GGCC 2 cut(s) 635, 876
Bso31I GGTCTC 1 cut(s) 748
BsoBI CYCGRG 1 cut(s) 263
Bsp1286I GDGCHC 2 cut(s) 302, 553
Bsp1407I TGTACA 1 cut(s) 908
Bsp143I GATC 2 cut(s) 69, 964
Bsp1720I GCTNAGC 2 cut(s) 251, 577
BspACI CCGC 5 cut(s) 5, 160, 780, 783, 980
BspANI GGCC 2 cut(s) 635, 876
BspCNI CTCAG 4 cut(s) 199, 590, 664, 739
BspFNI CGCG 1 cut(s) 780
BspHI TCATGA 2 cut(s) 787, 810
BspLI GGNNCC 4 cut(s) 181, 301, 356, 1002
BspPI GGATC 1 cut(s) 64
BspT107I GGYRCC 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 748
BsrDI GCAATG 1 cut(s) 651
BsrFI RCCGGY 3 cut(s) 176, 866, 876
BsrGI TGTACA 1 cut(s) 908
BsrI ACTGG 3 cut(s) 300, 809, 950
BssAI RCCGGY 3 cut(s) 176, 866, 876
BssECI CCNNGG 1 cut(s) 391
BssMI GATC 2 cut(s) 69, 964
BssNI GRCGYC 4 cut(s) 180, 218, 285, 990
BssSI CACGAG 1 cut(s) 835
Bst2BI CACGAG 1 cut(s) 835
Bst2UI CCWGG 3 cut(s) 393, 873, 1005
Bst4CI ACNGT 5 cut(s) 34, 311, 568, 913, 1000
BstACI GRCGYC 4 cut(s) 180, 218, 285, 990
BstAUI TGTACA 1 cut(s) 908
BstDEI CTNAG 8 cut(s) 186, 251, 531, 577, 600, 672, 747, 843
BstF5I GGATG 2 cut(s) 214, 758
BstFNI CGCG 1 cut(s) 780
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 2 cut(s) 182, 780
BstKTI GATC 2 cut(s) 72, 967
BstMAI GTCTC 3 cut(s) 91, 498, 748
BstMBI GATC 2 cut(s) 69, 964
BstMWI GCNNNNNNNGC 2 cut(s) 831, 1026
BstNI CCWGG 3 cut(s) 393, 873, 1005
BstSCI CCNGG 4 cut(s) 357, 391, 871, 1003
BstSFI CTRYAG 1 cut(s) 544
BstUI CGCG 1 cut(s) 780
BstV1I GCAGC 2 cut(s) 39, 161
BstV2I GAAGAC 1 cut(s) 465
BsuI GTATCC 1 cut(s) 504
BsuRI GGCC 2 cut(s) 635, 876
BtrI CACGTC 2 cut(s) 205, 409
BtsCI GGATG 2 cut(s) 214, 758
BtsIMutI CAGTG 1 cut(s) 943
CciI TCATGA 2 cut(s) 787, 810
CfoI GCGC 2 cut(s) 182, 780
Cfr10I RCCGGY 3 cut(s) 176, 866, 876
Cfr13I GGNCC 2 cut(s) 633, 869
CseI GACGC 2 cut(s) 207, 979
Csp6I GTAC 4 cut(s) 442, 569, 880, 909
CviAII CATG 3 cut(s) 788, 811, 1030
CviQI GTAC 4 cut(s) 442, 569, 880, 909
DdeI CTNAG 8 cut(s) 186, 251, 531, 577, 600, 672, 747, 843
DinI GGCGCC 1 cut(s) 181
DpnI GATC 2 cut(s) 71, 966
DpnII GATC 2 cut(s) 69, 964
EaeI YGGCCR 1 cut(s) 874
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 551
Eco24I GRGCYC 2 cut(s) 302, 553
Eco31I GGTCTC 1 cut(s) 748
Eco47I GGWCC 1 cut(s) 869
Eco53kI GAGCTC 1 cut(s) 551
Eco57I CTGAAG 2 cut(s) 42, 358
Eco88I CYCGRG 1 cut(s) 263
EcoICRI GAGCTC 1 cut(s) 551
EcoRII CCWGG 3 cut(s) 391, 871, 1003
EcoT38I GRGCYC 2 cut(s) 302, 553
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
Esp3I CGTCTC 1 cut(s) 91
FaeI CATG 3 cut(s) 791, 814, 1033
FatI CATG 3 cut(s) 787, 810, 1029
FauNDI CATATG 2 cut(s) 484, 1039
FbaI TGATCA 1 cut(s) 964
FblI GTMKAC 3 cut(s) 516, 705, 993
Fnu4HI GCNGC 5 cut(s) 53, 150, 161, 781, 981
FokI GGATG 2 cut(s) 221, 765
FriOI GRGCYC 2 cut(s) 302, 553
Fsp4HI GCNGC 5 cut(s) 53, 150, 161, 781, 981
FspBI CTAG 3 cut(s) 200, 323, 1026
GlaI GCGC 2 cut(s) 181, 779
GluI GCNGC 5 cut(s) 53, 150, 161, 781, 981
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 2 cut(s) 635, 876
HapII CCGG 5 cut(s) 73, 177, 359, 867, 877
HgaI GACGC 2 cut(s) 207, 979
HhaI GCGC 2 cut(s) 182, 780
Hin1I GRCGYC 4 cut(s) 180, 218, 285, 990
Hin1II CATG 3 cut(s) 791, 814, 1033
Hin6I GCGC 2 cut(s) 180, 778
HinP1I GCGC 2 cut(s) 180, 778
HinfI GANTC 7 cut(s) 194, 332, 369, 506, 607, 791, 1033
HpaII CCGG 5 cut(s) 73, 177, 359, 867, 877
HphI GGTGA 3 cut(s) 46, 70, 280
Hpy166II GTNNAC 5 cut(s) 78, 517, 706, 840, 994
Hpy188I TCNGA 4 cut(s) 118, 245, 748, 1059
Hpy188III TCNNGA 8 cut(s) 88, 263, 352, 401, 497, 682, 788, 811
Hpy8I GTNNAC 5 cut(s) 78, 517, 706, 840, 994
Hpy99I CGWCG 2 cut(s) 223, 273
HpyAV CCTTC 2 cut(s) 178, 243
HpyCH4III ACNGT 5 cut(s) 34, 311, 568, 913, 1000
HpyCH4IV ACGT 4 cut(s) 204, 285, 408, 425
HpyCH4V TGCA 3 cut(s) 174, 306, 917
HpyF10VI GCNNNNNNNGC 2 cut(s) 831, 1026
HpyF3I CTNAG 8 cut(s) 186, 251, 531, 577, 600, 672, 747, 843
HpySE526I ACGT 4 cut(s) 204, 285, 408, 425
Hsp92I GRCGYC 4 cut(s) 180, 218, 285, 990
Hsp92II CATG 3 cut(s) 791, 814, 1033
HspAI GCGC 2 cut(s) 180, 778
KasI GGCGCC 1 cut(s) 179
Ksp22I TGATCA 1 cut(s) 964
Kzo9I GATC 2 cut(s) 69, 964
LmnI GCTCC 1 cut(s) 305
Lsp1109I GCAGC 2 cut(s) 39, 161
LweI GCATC 3 cut(s) 140, 743, 1017
MaeI CTAG 3 cut(s) 200, 323, 1026
MaeII ACGT 4 cut(s) 204, 285, 408, 425
MaeIII GTNAC 4 cut(s) 28, 281, 286, 338
MalI GATC 2 cut(s) 71, 966
MboI GATC 2 cut(s) 69, 964
MboII GAAGA 3 cut(s) 35, 364, 470
MhlI GDGCHC 2 cut(s) 302, 553
MluCI AATT 2 cut(s) 125, 140
Mly113I GGCGCC 1 cut(s) 180
MlyI GAGTC 2 cut(s) 500, 785
MmeI TCCRAC 1 cut(s) 141
MseI TTAA 3 cut(s) 852, 1014, 1062
MspA1I CMGCKG 1 cut(s) 160
MspI CCGG 5 cut(s) 73, 177, 359, 867, 877
MspR9I CCNGG 4 cut(s) 359, 393, 873, 1005
MvaI CCWGG 3 cut(s) 393, 873, 1005
MvnI CGCG 1 cut(s) 780
MwoI GCNNNNNNNGC 2 cut(s) 831, 1026
NarI GGCGCC 1 cut(s) 180
NciI CCSGG 1 cut(s) 359
NdeI CATATG 2 cut(s) 484, 1039
NdeII GATC 2 cut(s) 69, 964
NlaIII CATG 3 cut(s) 791, 814, 1033
NlaIV GGNNCC 4 cut(s) 181, 301, 356, 1002
NmuCI GTSAC 3 cut(s) 28, 281, 286
PaeR7I CTCGAG 1 cut(s) 263
PagI TCATGA 2 cut(s) 787, 810
PcsI WCGNNNNNNNCGW 2 cut(s) 160, 277
PfeI GAWTC 5 cut(s) 194, 332, 369, 607, 1033
PflFI GACNNNGTC 1 cut(s) 407
PkrI GCNGC 5 cut(s) 54, 151, 162, 782, 982
PleI GAGTC 2 cut(s) 500, 785
PluTI GGCGCC 1 cut(s) 183
PpsI GAGTC 2 cut(s) 500, 785
PshBI ATTAAT 1 cut(s) 1062
Psp124BI GAGCTC 1 cut(s) 553
Psp6I CCWGG 3 cut(s) 391, 871, 1003
PspGI CCWGG 3 cut(s) 391, 871, 1003
PspN4I GGNNCC 4 cut(s) 181, 301, 356, 1002
PspPI GGNCC 2 cut(s) 633, 869
PsyI GACNNNGTC 1 cut(s) 407
RsaI GTAC 4 cut(s) 443, 570, 881, 910
RsaNI GTAC 4 cut(s) 442, 569, 880, 909
SacI GAGCTC 1 cut(s) 553
SaqAI TTAA 3 cut(s) 852, 1014, 1062
SatI GCNGC 5 cut(s) 53, 150, 161, 781, 981
Sau3AI GATC 2 cut(s) 69, 964
Sau96I GGNCC 2 cut(s) 633, 869
SchI GAGTC 2 cut(s) 500, 785
ScrFI CCNGG 4 cut(s) 359, 393, 873, 1005
SduI GDGCHC 2 cut(s) 302, 553
SfaNI GCATC 3 cut(s) 140, 743, 1017
SfcI CTRYAG 1 cut(s) 544
SfoI GGCGCC 1 cut(s) 181
Sfr274I CTCGAG 1 cut(s) 263
SgrAI CRCCGGYG 1 cut(s) 176
SinI GGWCC 1 cut(s) 869
SlaI CTCGAG 1 cut(s) 263
SmlI CTYRAG 1 cut(s) 263
SmoI CTYRAG 1 cut(s) 263
Sse9I AATT 2 cut(s) 125, 140
SsiI CCGC 5 cut(s) 5, 160, 780, 783, 980
SspDI GGCGCC 1 cut(s) 179
SspI AATATT 1 cut(s) 40
SspMI CTAG 3 cut(s) 200, 323, 1026
SstI GAGCTC 1 cut(s) 553
StyD4I CCNGG 4 cut(s) 357, 391, 871, 1003
TaaI ACNGT 5 cut(s) 34, 311, 568, 913, 1000
TaiI ACGT 4 cut(s) 207, 288, 411, 428
TaqI TCGA 5 cut(s) 89, 192, 264, 641, 660
TasI AATT 2 cut(s) 125, 140
TatI WGTACW 1 cut(s) 908
TauI GCSGC 3 cut(s) 163, 783, 983
TfiI GAWTC 5 cut(s) 194, 332, 369, 607, 1033
Tru1I TTAA 3 cut(s) 852, 1014, 1062
Tru9I TTAA 3 cut(s) 852, 1014, 1062
TscAI CASTG 1 cut(s) 950
TseFI GTSAC 3 cut(s) 28, 281, 286
TseI GCWGC 2 cut(s) 52, 149
Tsp45I GTSAC 3 cut(s) 28, 281, 286
TspDTI ATGAA 3 cut(s) 94, 617, 660
TspGWI ACGGA 3 cut(s) 73, 229, 897
TspRI CASTG 1 cut(s) 950
Tth111I GACNNNGTC 1 cut(s) 407
VpaK11BI GGWCC 1 cut(s) 869
VspI ATTAAT 1 cut(s) 1062
XapI RAATTY 1 cut(s) 125
XhoI CTCGAG 1 cut(s) 263
XmiI GTMKAC 3 cut(s) 516, 705, 993
XspI CTAG 3 cut(s) 200, 323, 1026
ZraI GACGTC 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.