Prupe.6G214600_v2.0.a1

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000082
Physical Location & Seq
Reverse (-)
22249416 .. 22252307
2892 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G214600.1

Sequence Viewer

Length: 1110 bp
GTCCAACAAAACCTAATTAAAAAAGCAATGGCAATGGAGAAGACGACCCTCCCTGATGATATTATTGTGGAAATTCTCTTGAAGCTACCCATGGAATCTTTAATCCGATTCAGTTGCGTTTCGAAAAGGTGGCGTTATTTAGTAATCTCTGACCCGGAATTCGCACAACACCATTTTAAATTAGGTTCCAAGCATAAAACCCTCAAGCGCAGACTCCTCTTCTCATCAACTTCCTCTAAATATCCATATGAATTAAACTGGCCAGAGCACTTGTTTGGATCCGTAGACTTGGAAGGCGATTCTCCAGTGATCAGTAAGCTCGTCAGCCCATTTAAGCAGGGCAATGGTGCCATTATACTGGGATCCTGCAACGGCTTGGTATGTGCACAATTTCAAGAAAAGTTTTACATCTGTAACCCATCAACCGGATTGTCCAACACATTATGTAACAGTGGTTTTTTAGAATATTTTCGGTCAAAAGCTAATGGGAGGAGGCGTCGTGTTGAAATGTCTCCTATTTATCATGGTTTCGGTTATGTGTCGGCTACTGATGACTACAAACTTGTGGTAGCCATTGCCAACTCGTGGAAAACGATTCAAGCTCCATTCTTATCCATTCAGGCTCATGTAATATACATTAAGCAGAAACGGGGGACTCTTTCAAACGAGGCACTCCATTGGCTGCCTTGGGGTGGCGGACCAGTTGTAATTGCTTTTGATTTGGCAGTGGAGTTCCGAGACGTAATGTTGCCAATTAAGAATGTATTCGCTACTAGGGATACTAGGATGCCCGATTTTCAATATATGGAAGTCTGGGTAATGAGAGAATATGATGTGTGTGAATCTTGGACTGTGCTCTTTAAGTGTAGCATTGACTATGAGCTGCCACGGCCTTCCAGTTCTATCTTCATTAGGGAAAGTGGTACAACTTTGATCCGGTATTGTAGTGGCAAGAAGGTGGAGTTGATATGGTTTGATAAAAATGAAGACAAGTTTGACAACGATGTGGTTTGCAGTCGATGTATGCTTGAGGGACTTTACTATGCGGATGACAGGATTGAATATGTTGAGAGTCTGCTTTGTTTGCCTGACATTTCCTGTAAGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

370

Amino Acids

42.43

Weight (kDa)

8.18

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 347
AccB7I CCANNNNNTGG 1 cut(s) 585
AccI GTMKAC 1 cut(s) 285
AciI CCGC 2 cut(s) 696, 1046
AclWI GGATC 5 cut(s) 273, 286, 357, 370, 928
AcoI YGGCCR 1 cut(s) 260
AcsI RAATTY 2 cut(s) 72, 158
AcyI GRCGYC 1 cut(s) 496
AfaI GTAC 1 cut(s) 925
AfiI CCNNNNNNNGG 3 cut(s) 425, 585, 692
AgsI TTSAA 7 cut(s) 82, 395, 506, 599, 663, 800, 1061
AluBI AGCT 6 cut(s) 85, 319, 482, 602, 883, 1105
AluI AGCT 6 cut(s) 85, 319, 482, 602, 883, 1105
Alw21I GWGCWC 3 cut(s) 270, 388, 858
Alw26I GTCTC 2 cut(s) 516, 732
Alw44I GTGCAC 1 cut(s) 384
AlwI GGATC 5 cut(s) 273, 286, 357, 370, 928
AoxI GGCC 2 cut(s) 260, 890
ApaLI GTGCAC 1 cut(s) 384
ApeKI GCWGC 2 cut(s) 682, 883
ApoI RAATTY 2 cut(s) 72, 158
ArsI GACNNNNNNTTYG 2 cut(s) 143, 175
Asp700I GAANNNNTTC 2 cut(s) 468, 764
AspLEI GCGC 1 cut(s) 210
AspS9I GGNCC 1 cut(s) 698
AsuC2I CCSGG 1 cut(s) 155
AsuII TTCGAA 1 cut(s) 122
AvaII GGWCC 1 cut(s) 698
BaeGI GKGCMC 1 cut(s) 388
BalI TGGCCA 1 cut(s) 262
BamHI GGATCC 2 cut(s) 278, 362
BanI GGYRCC 1 cut(s) 347
BauI CACGAG 1 cut(s) 583
BbsI GAAGAC 2 cut(s) 47, 993
Bbv12I GWGCWC 3 cut(s) 270, 388, 858
BbvI GCAGC 2 cut(s) 669, 870
BccI CCATC 1 cut(s) 427
BceAI ACGGC 2 cut(s) 388, 905
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciVI GTATCC 1 cut(s) 772
BclI TGATCA 1 cut(s) 309
BcnI CCSGG 1 cut(s) 155
BcoDI GTCTC 2 cut(s) 516, 732
BfaI CTAG 2 cut(s) 774, 783
BfuI GTATCC 1 cut(s) 772
BisI GCNGC 2 cut(s) 683, 884
BlsI GCNGC 2 cut(s) 684, 885
Bme1390I CCNGG 1 cut(s) 155
Bme18I GGWCC 1 cut(s) 698
BmgT120I GGNCC 1 cut(s) 698
BmiI GGNNCC 4 cut(s) 187, 280, 349, 364
BmrFI CCNGG 1 cut(s) 155
BmrI ACTGGG 1 cut(s) 368
BmsI GCATC 1 cut(s) 777
BmuI ACTGGG 1 cut(s) 368
BpiI GAAGAC 2 cut(s) 47, 993
BpmI CTGGAG 1 cut(s) 288
Bpu14I TTCGAA 1 cut(s) 122
BpuEI CTTGAG 2 cut(s) 188, 1049
BpuMI CCSGG 1 cut(s) 155
BsaHI GRCGYC 1 cut(s) 496
BsaJI CCNNGG 3 cut(s) 90, 686, 887
BsaWI WCCGGW 2 cut(s) 425, 936
BsaXI ACNNNNNCTCC 4 cut(s) 481, 484, 511, 514
Bsc4I CCNNNNNNNGG 3 cut(s) 425, 585, 692
Bse1I ACTGG 5 cut(s) 263, 305, 363, 701, 897
Bse3DI GCAATG 4 cut(s) 33, 39, 349, 573
BseDI CCNNGG 3 cut(s) 90, 686, 887
BseGI GGATG 2 cut(s) 792, 1054
BseLI CCNNNNNNNGG 3 cut(s) 425, 585, 692
BseMI GCAATG 4 cut(s) 33, 39, 349, 573
BseNI ACTGG 5 cut(s) 263, 305, 363, 701, 897
BseRI GAGGAG 2 cut(s) 206, 505
BseSI GKGCMC 1 cut(s) 388
BseXI GCAGC 2 cut(s) 669, 870
BshFI GGCC 2 cut(s) 262, 892
BshNI GGYRCC 1 cut(s) 347
BsiHKAI GWGCWC 3 cut(s) 270, 388, 858
BsiSI CCGG 3 cut(s) 155, 426, 937
BslFI GGGAC 2 cut(s) 667, 1047
BslI CCNNNNNNNGG 3 cut(s) 425, 585, 692
BsmAI GTCTC 2 cut(s) 516, 732
BsmBI CGTCTC 1 cut(s) 732
BsmFI GGGAC 2 cut(s) 667, 1047
BsnI GGCC 2 cut(s) 262, 892
Bsp119I TTCGAA 1 cut(s) 122
Bsp1286I GDGCHC 3 cut(s) 270, 388, 858
Bsp143I GATC 4 cut(s) 278, 309, 362, 933
Bsp19I CCATGG 1 cut(s) 90
BspACI CCGC 2 cut(s) 696, 1046
BspANI GGCC 2 cut(s) 262, 892
BspLI GGNNCC 4 cut(s) 187, 280, 349, 364
BspPI GGATC 5 cut(s) 273, 286, 357, 370, 928
BspT104I TTCGAA 1 cut(s) 122
BspT107I GGYRCC 1 cut(s) 347
BsrDI GCAATG 4 cut(s) 33, 39, 349, 573
BsrI ACTGG 5 cut(s) 263, 305, 363, 701, 897
BssECI CCNNGG 3 cut(s) 90, 686, 887
BssMI GATC 4 cut(s) 278, 309, 362, 933
BssNI GRCGYC 1 cut(s) 496
BssSI CACGAG 1 cut(s) 583
BssT1I CCWWGG 2 cut(s) 90, 686
Bst2BI CACGAG 1 cut(s) 583
Bst4CI ACNGT 2 cut(s) 452, 853
Bst6I CTCTTC 1 cut(s) 224
BstACI GRCGYC 1 cut(s) 496
BstBI TTCGAA 1 cut(s) 122
BstDSI CCRYGG 2 cut(s) 90, 887
BstF5I GGATG 2 cut(s) 792, 1054
BstHHI GCGC 1 cut(s) 210
BstKTI GATC 4 cut(s) 281, 312, 365, 936
BstMAI GTCTC 2 cut(s) 516, 732
BstMBI GATC 4 cut(s) 278, 309, 362, 933
BstMWI GCNNNNNNNGC 2 cut(s) 889, 1084
BstSCI CCNGG 1 cut(s) 153
BstSLI GKGCMC 1 cut(s) 388
BstV1I GCAGC 2 cut(s) 669, 870
BstV2I GAAGAC 2 cut(s) 47, 993
BstX2I RGATCY 2 cut(s) 278, 362
BstXI CCANNNNNNTGG 1 cut(s) 358
BstYI RGATCY 2 cut(s) 278, 362
BsuI GTATCC 1 cut(s) 772
BsuRI GGCC 2 cut(s) 262, 892
BtgI CCRYGG 2 cut(s) 90, 887
BtsCI GGATG 2 cut(s) 792, 1054
BtsI GCAGTG 1 cut(s) 732
BtsIMutI CAGTG 3 cut(s) 312, 457, 732
CfoI GCGC 1 cut(s) 210
Cfr13I GGNCC 1 cut(s) 698
CseI GACGC 1 cut(s) 485
Csp6I GTAC 1 cut(s) 924
CviAII CATG 3 cut(s) 91, 524, 626
CviQI GTAC 1 cut(s) 924
DpnI GATC 4 cut(s) 280, 311, 364, 935
DpnII GATC 4 cut(s) 278, 309, 362, 933
DraI TTTAAA 1 cut(s) 178
EaeI YGGCCR 1 cut(s) 260
Eam1104I CTCTTC 1 cut(s) 224
EarI CTCTTC 1 cut(s) 224
EciI GGCGGA 1 cut(s) 711
Eco130I CCWWGG 2 cut(s) 90, 686
Eco47I GGWCC 1 cut(s) 698
EcoRI GAATTC 1 cut(s) 158
EcoT14I CCWWGG 2 cut(s) 90, 686
ErhI CCWWGG 2 cut(s) 90, 686
Esp3I CGTCTC 1 cut(s) 732
FaeI CATG 3 cut(s) 94, 527, 629
FaqI GGGAC 2 cut(s) 667, 1047
FatI CATG 3 cut(s) 90, 523, 625
FauNDI CATATG 1 cut(s) 247
FbaI TGATCA 1 cut(s) 309
FblI GTMKAC 1 cut(s) 285
Fnu4HI GCNGC 2 cut(s) 683, 884
FokI GGATG 2 cut(s) 799, 1061
Fsp4HI GCNGC 2 cut(s) 683, 884
FspBI CTAG 2 cut(s) 774, 783
GlaI GCGC 1 cut(s) 209
GluI GCNGC 2 cut(s) 683, 884
GsuI CTGGAG 1 cut(s) 288
HaeIII GGCC 2 cut(s) 262, 892
HapII CCGG 3 cut(s) 155, 426, 937
HgaI GACGC 1 cut(s) 485
HhaI GCGC 1 cut(s) 210
Hin1I GRCGYC 1 cut(s) 496
Hin1II CATG 3 cut(s) 94, 527, 629
Hin6I GCGC 1 cut(s) 208
HinP1I GCGC 1 cut(s) 208
HindIII AAGCTT 1 cut(s) 1103
HinfI GANTC 8 cut(s) 95, 108, 213, 299, 595, 655, 842, 1072
HpaII CCGG 3 cut(s) 155, 426, 937
Hpy166II GTNNAC 2 cut(s) 286, 386
Hpy188I TCNGA 3 cut(s) 107, 151, 737
Hpy188III TCNNGA 2 cut(s) 79, 395
Hpy8I GTNNAC 2 cut(s) 286, 386
Hpy99I CGWCG 1 cut(s) 501
HpyAV CCTTC 3 cut(s) 287, 903, 949
HpyCH4III ACNGT 2 cut(s) 452, 853
HpyCH4IV ACGT 1 cut(s) 741
HpyCH4V TGCA 3 cut(s) 369, 386, 1014
HpyF10VI GCNNNNNNNGC 2 cut(s) 889, 1084
HpySE526I ACGT 1 cut(s) 741
Hsp92I GRCGYC 1 cut(s) 496
Hsp92II CATG 3 cut(s) 94, 527, 629
HspAI GCGC 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 309
Kzo9I GATC 4 cut(s) 278, 309, 362, 933
LmnI GCTCC 1 cut(s) 607
Lsp1109I GCAGC 2 cut(s) 669, 870
LweI GCATC 1 cut(s) 777
MaeI CTAG 2 cut(s) 774, 783
MaeII ACGT 1 cut(s) 741
MaeIII GTNAC 2 cut(s) 413, 446
MalI GATC 4 cut(s) 280, 311, 364, 935
MboI GATC 4 cut(s) 278, 309, 362, 933
MboII GAAGA 4 cut(s) 52, 211, 898, 998
MflI RGATCY 2 cut(s) 278, 362
MhlI GDGCHC 3 cut(s) 270, 388, 858
MlsI TGGCCA 1 cut(s) 262
MluCI AATT 8 cut(s) 15, 72, 158, 179, 251, 389, 708, 753
MluNI TGGCCA 1 cut(s) 262
MlyI GAGTC 3 cut(s) 207, 649, 1081
MmeI TCCRAC 2 cut(s) 28, 459
MnlI CCTC 8 cut(s) 59, 212, 227, 244, 483, 486, 661, 1024
Mox20I TGGCCA 1 cut(s) 262
MroXI GAANNNNTTC 2 cut(s) 468, 764
MscI TGGCCA 1 cut(s) 262
MseI TTAA 8 cut(s) 18, 101, 177, 254, 333, 639, 756, 861
Msp20I TGGCCA 1 cut(s) 262
MspI CCGG 3 cut(s) 155, 426, 937
MspR9I CCNGG 1 cut(s) 155
MwoI GCNNNNNNNGC 2 cut(s) 889, 1084
NciI CCSGG 1 cut(s) 155
NcoI CCATGG 1 cut(s) 90
NdeI CATATG 1 cut(s) 247
NdeII GATC 4 cut(s) 278, 309, 362, 933
NlaIII CATG 3 cut(s) 94, 527, 629
NlaIV GGNNCC 4 cut(s) 187, 280, 349, 364
NspV TTCGAA 1 cut(s) 122
PcsI WCGNNNNNNNCGW 1 cut(s) 590
PdmI GAANNNNTTC 2 cut(s) 468, 764
PfeI GAWTC 5 cut(s) 95, 108, 299, 595, 842
PflMI CCANNNNNTGG 1 cut(s) 585
PkrI GCNGC 2 cut(s) 684, 885
PleI GAGTC 3 cut(s) 207, 649, 1080
PpsI GAGTC 3 cut(s) 207, 649, 1080
PspN4I GGNNCC 4 cut(s) 187, 280, 349, 364
PspPI GGNCC 1 cut(s) 698
PsuI RGATCY 2 cut(s) 278, 362
RsaI GTAC 1 cut(s) 925
RsaNI GTAC 1 cut(s) 924
SaqAI TTAA 8 cut(s) 18, 101, 177, 254, 333, 639, 756, 861
SatI GCNGC 2 cut(s) 683, 884
Sau3AI GATC 4 cut(s) 278, 309, 362, 933
Sau96I GGNCC 1 cut(s) 698
SchI GAGTC 3 cut(s) 207, 649, 1081
ScrFI CCNGG 1 cut(s) 155
SduI GDGCHC 3 cut(s) 270, 388, 858
SfaNI GCATC 1 cut(s) 777
SfuI TTCGAA 1 cut(s) 122
SinI GGWCC 1 cut(s) 698
SmlI CTYRAG 2 cut(s) 203, 1028
SmoI CTYRAG 2 cut(s) 203, 1028
Sse9I AATT 8 cut(s) 15, 72, 158, 179, 251, 389, 708, 753
SsiI CCGC 2 cut(s) 696, 1046
SspI AATATT 1 cut(s) 467
SspMI CTAG 2 cut(s) 774, 783
StyD4I CCNGG 1 cut(s) 153
StyI CCWWGG 2 cut(s) 90, 686
TaaI ACNGT 2 cut(s) 452, 853
TaiI ACGT 1 cut(s) 744
TaqI TCGA 2 cut(s) 122, 1018
TaqII GACCGA 1 cut(s) 462
TasI AATT 8 cut(s) 15, 72, 158, 179, 251, 389, 708, 753
TfiI GAWTC 5 cut(s) 95, 108, 299, 595, 842
Tru1I TTAA 8 cut(s) 18, 101, 177, 254, 333, 639, 756, 861
Tru9I TTAA 8 cut(s) 18, 101, 177, 254, 333, 639, 756, 861
TscAI CASTG 3 cut(s) 312, 457, 732
TseI GCWGC 2 cut(s) 682, 883
TspDTI ATGAA 3 cut(s) 264, 898, 999
TspGWI ACGGA 1 cut(s) 271
TspRI CASTG 3 cut(s) 312, 457, 732
Van91I CCANNNNNTGG 1 cut(s) 585
VneI GTGCAC 1 cut(s) 384
VpaK11BI GGWCC 1 cut(s) 698
XapI RAATTY 2 cut(s) 72, 158
XmiI GTMKAC 1 cut(s) 285
XmnI GAANNNNTTC 2 cut(s) 468, 764
XspI CTAG 2 cut(s) 774, 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.