Rorug02G0148100

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000082
Physical Location & Seq
Reverse (-)
12984429 .. 12985776
1348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0148100.1

Sequence Viewer

Length: 1044 bp
ATGGCTGAATCAATAGACGCCGTCTCCGTTGACATGGAGAAGATCTATCTCGGCGGAAAGGAACATTTTATTCGAACTGGCTGTGGTTCTGTGTCCGTTATAGTCTGTGGGGACCAAGATAAGCCTGCACTTATCACGTATCCTGATTTAGCTCTAAATCATATGTCTTGTTTCCAAGGGTTATTCTCTTGTCCTGAAGCAGCTTCTTTCCTGCTCCACAACTTCTGCATATACCATATTGGTCCTCCTGGTCATGAGTTAGGAGCTGCTTCGATTAGTCCTGATGATCCTGTGCCTTCTGCTGACGACTTGGCAGATCAGATCCTTGAAGTTCTAAATTTTTTCGGGCTTGGTGCAGTTATGTGCATGGGAGTGACAGCGGGTGCTTATATCCTTTCCTTATTTGCTACGAAATATAGGAAACGCGTTCTTGGTTTGATACTTGTATCTCCATTATGCAGAGCACCATCTTGGACCGAATGGTTTTATAATAAGGTGATATCAAATATGCTATATTTCTATGGGATGTGTGGTTTGCTAAAGGAGCGTTTGCTTCAGCGTTACTTTAGTAAGGAGGTTCGTGGTAGTGCTGAAGTTCCGGAGTCGGATATAGTTCAAGCATGCAGAAAGTTGTTGGAAGAGAGGCAGAGCTCAAATGTTTGGAGATTTCTTAAAGCAATTAATCGGAGACCTGACATAACTGAAGGCTTGAAGTCACTAAGGTGTCGCACTCTCATTTTTGTTGGGGATAGCTCTCCTTTCCACCGTGAGGCTCTCCACATGATCTCAAAGTTGGATAGAAGAAATAGTGCCTTAGTAGAGGTCCAGGCTTGTGGATCGATGGTGACAGAGGAGCAGCCACATGCAATGTTGATACCCATGGAGTACTTCTTCGTGGGGTATGGTTTTTACAGACCGTGTCATTTCAGAGAGAGCCCTAGGAGCCCACTCATCCCATCTTGCATCTCCCCGGAGCTTCTCTCCCCGGAAAGCATGGGTCTGAAGCTAAAACCAATCAAGACCCGTGTGTCGCTCAGATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

347

Amino Acids

38.87

Weight (kDa)

7.52

Isoelectric Point (pI)

50.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ndr PF03096 21 - 305 8.7e-113 Ndr family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 489, 1042
AasI GACNNNNNNGTC 1 cut(s) 1027
AccII CGCG 1 cut(s) 426
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 2 cut(s) 54, 380
AclWI GGATC 3 cut(s) 281, 316, 844
AcsI RAATTY 1 cut(s) 337
AcuI CTGAAG 5 cut(s) 216, 539, 612, 723, 1022
AcyI GRCGYC 1 cut(s) 18
AfaI GTAC 1 cut(s) 887
AfiI CCNNNNNNNGG 1 cut(s) 769
AflIII ACRYGT 1 cut(s) 424
AgsI TTSAA 3 cut(s) 329, 617, 712
AjnI CCWGG 2 cut(s) 247, 825
AleI CACNNNNGTG 1 cut(s) 721
AluBI AGCT 7 cut(s) 152, 203, 266, 651, 753, 976, 1006
AluI AGCT 7 cut(s) 152, 203, 266, 651, 753, 976, 1006
Alw21I GWGCWC 2 cut(s) 466, 653
Alw26I GTCTC 2 cut(s) 28, 682
AlwI GGATC 3 cut(s) 281, 316, 844
Aor13HI TCCGGA 1 cut(s) 598
ApeKI GCWGC 3 cut(s) 200, 266, 856
ApoI RAATTY 1 cut(s) 337
AseI ATTAAT 1 cut(s) 681
AspA2I CCTAGG 1 cut(s) 938
AspS9I GGNCC 4 cut(s) 112, 242, 474, 823
AsuC2I CCSGG 2 cut(s) 971, 986
AsuHPI GGTGA 2 cut(s) 508, 856
AsuII TTCGAA 1 cut(s) 73
AvaII GGWCC 4 cut(s) 112, 242, 474, 823
AvrII CCTAGG 1 cut(s) 938
BanII GRGCYC 3 cut(s) 653, 938, 947
Bbv12I GWGCWC 2 cut(s) 466, 653
BbvI GCAGC 3 cut(s) 212, 253, 868
BccI CCATC 3 cut(s) 475, 835, 964
BceAI ACGGC 1 cut(s) 5
BciT130I CCWGG 2 cut(s) 249, 827
BciVI GTATCC 1 cut(s) 150
BcnI CCSGG 2 cut(s) 971, 986
BcoDI GTCTC 2 cut(s) 28, 682
BfaI CTAG 1 cut(s) 939
BfuI GTATCC 1 cut(s) 150
BglII AGATCT 1 cut(s) 42
BisI GCNGC 3 cut(s) 201, 267, 857
BlnI CCTAGG 1 cut(s) 938
BlsI GCNGC 3 cut(s) 202, 268, 858
BmcAI AGTACT 1 cut(s) 887
Bme1390I CCNGG 4 cut(s) 249, 827, 971, 986
Bme18I GGWCC 4 cut(s) 112, 242, 474, 823
BmgT120I GGNCC 4 cut(s) 112, 242, 474, 823
BmiI GGNNCC 2 cut(s) 113, 944
BmrFI CCNGG 4 cut(s) 249, 827, 971, 986
BmsI GCATC 1 cut(s) 972
BplI GAGNNNNNCTC 2 cut(s) 965, 997
Bpu14I TTCGAA 1 cut(s) 73
BpuMI CCSGG 2 cut(s) 971, 986
Bsa29I ATCGAT 1 cut(s) 839
BsaAI YACGTR 1 cut(s) 138
BsaHI GRCGYC 1 cut(s) 18
BsaI GGTCTC 1 cut(s) 682
BsaJI CCNNGG 5 cut(s) 175, 879, 938, 969, 984
BsaWI WCCGGW 1 cut(s) 598
BsaXI ACNNNNNCTCC 2 cut(s) 8, 38
Bsc4I CCNNNNNNNGG 1 cut(s) 769
Bse1I ACTGG 1 cut(s) 82
Bse3DI GCAATG 1 cut(s) 873
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 2 cut(s) 249, 827
BseCI ATCGAT 1 cut(s) 839
BseDI CCNNGG 5 cut(s) 175, 879, 938, 969, 984
BseGI GGATG 2 cut(s) 531, 951
BseLI CCNNNNNNNGG 1 cut(s) 769
BseMI GCAATG 1 cut(s) 873
BseNI ACTGG 1 cut(s) 82
BseRI GAGGAG 1 cut(s) 866
BseXI GCAGC 3 cut(s) 212, 253, 868
BsgI GTGCAG 2 cut(s) 111, 375
Bsh1236I CGCG 1 cut(s) 426
BshVI ATCGAT 1 cut(s) 839
BsiHKAI GWGCWC 2 cut(s) 466, 653
BsiSI CCGG 3 cut(s) 599, 971, 986
BslFI GGGAC 1 cut(s) 125
BslI CCNNNNNNNGG 1 cut(s) 769
BsmAI GTCTC 2 cut(s) 28, 682
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 1 cut(s) 125
Bso31I GGTCTC 1 cut(s) 682
Bsp119I TTCGAA 1 cut(s) 73
Bsp1286I GDGCHC 4 cut(s) 466, 653, 938, 947
Bsp13I TCCGGA 1 cut(s) 598
Bsp143I GATC 6 cut(s) 42, 286, 316, 321, 783, 836
Bsp19I CCATGG 1 cut(s) 879
BspACI CCGC 2 cut(s) 54, 380
BspDI ATCGAT 1 cut(s) 839
BspEI TCCGGA 1 cut(s) 598
BspFNI CGCG 1 cut(s) 426
BspHI TCATGA 1 cut(s) 253
BspLI GGNNCC 2 cut(s) 113, 944
BspPI GGATC 3 cut(s) 281, 316, 844
BspT104I TTCGAA 1 cut(s) 73
BspTNI GGTCTC 1 cut(s) 682
BsrDI GCAATG 1 cut(s) 873
BsrI ACTGG 1 cut(s) 82
BssECI CCNNGG 5 cut(s) 175, 879, 938, 969, 984
BssMI GATC 6 cut(s) 42, 286, 316, 321, 783, 836
BssNI GRCGYC 1 cut(s) 18
BssT1I CCWWGG 3 cut(s) 175, 879, 938
Bst2UI CCWGG 2 cut(s) 249, 827
Bst4CI ACNGT 2 cut(s) 767, 918
Bst6I CTCTTC 1 cut(s) 633
BstACI GRCGYC 1 cut(s) 18
BstBAI YACGTR 1 cut(s) 138
BstBI TTCGAA 1 cut(s) 73
BstC8I GCNNGC 2 cut(s) 126, 622
BstDEI CTNAG 3 cut(s) 719, 814, 1034
BstDSI CCRYGG 1 cut(s) 879
BstF5I GGATG 2 cut(s) 531, 951
BstFNI CGCG 1 cut(s) 426
BstKTI GATC 6 cut(s) 45, 289, 319, 324, 786, 839
BstMAI GTCTC 2 cut(s) 28, 682
BstMBI GATC 6 cut(s) 42, 286, 316, 321, 783, 836
BstMWI GCNNNNNNNGC 2 cut(s) 544, 942
BstNI CCWGG 2 cut(s) 249, 827
BstNSI RCATGY 2 cut(s) 624, 866
BstSCI CCNGG 4 cut(s) 247, 825, 969, 984
BstUI CGCG 1 cut(s) 426
BstV1I GCAGC 3 cut(s) 212, 253, 868
BstX2I RGATCY 2 cut(s) 42, 321
BstXI CCANNNNNNTGG 1 cut(s) 833
BstYI RGATCY 2 cut(s) 42, 321
Bsu15I ATCGAT 1 cut(s) 839
BsuI GTATCC 1 cut(s) 150
BsuTUI ATCGAT 1 cut(s) 839
BtgI CCRYGG 1 cut(s) 879
BtsCI GGATG 2 cut(s) 531, 951
Cac8I GCNNGC 2 cut(s) 126, 622
CciI TCATGA 1 cut(s) 253
Cfr13I GGNCC 4 cut(s) 112, 242, 474, 823
ClaI ATCGAT 1 cut(s) 839
CseI GACGC 1 cut(s) 26
Csp6I GTAC 1 cut(s) 886
CviAII CATG 8 cut(s) 34, 254, 367, 621, 781, 863, 880, 994
CviQI GTAC 1 cut(s) 886
DdeI CTNAG 3 cut(s) 719, 814, 1034
DpnI GATC 6 cut(s) 44, 288, 318, 323, 785, 838
DpnII GATC 6 cut(s) 42, 286, 316, 321, 783, 836
DrdI GACNNNNNNGTC 1 cut(s) 1027
DseDI GACNNNNNNGTC 1 cut(s) 1027
Eam1104I CTCTTC 1 cut(s) 633
EarI CTCTTC 1 cut(s) 633
EciI GGCGGA 1 cut(s) 69
Ecl136II GAGCTC 1 cut(s) 651
Eco130I CCWWGG 3 cut(s) 175, 879, 938
Eco24I GRGCYC 3 cut(s) 653, 938, 947
Eco31I GGTCTC 1 cut(s) 682
Eco32I GATATC 1 cut(s) 501
Eco47I GGWCC 4 cut(s) 112, 242, 474, 823
Eco53kI GAGCTC 1 cut(s) 651
Eco57I CTGAAG 5 cut(s) 216, 539, 612, 723, 1022
EcoICRI GAGCTC 1 cut(s) 651
EcoRII CCWGG 2 cut(s) 247, 825
EcoRV GATATC 1 cut(s) 501
EcoT14I CCWWGG 3 cut(s) 175, 879, 938
EcoT38I GRGCYC 3 cut(s) 653, 938, 947
ErhI CCWWGG 3 cut(s) 175, 879, 938
Esp3I CGTCTC 1 cut(s) 28
FaeI CATG 8 cut(s) 37, 257, 370, 624, 784, 866, 883, 997
FaqI GGGAC 1 cut(s) 125
FatI CATG 8 cut(s) 33, 253, 366, 620, 780, 862, 879, 993
FauI CCCGC 1 cut(s) 373
FauNDI CATATG 1 cut(s) 162
Fnu4HI GCNGC 3 cut(s) 201, 267, 857
FokI GGATG 2 cut(s) 538, 938
FriOI GRGCYC 3 cut(s) 653, 938, 947
Fsp4HI GCNGC 3 cut(s) 201, 267, 857
FspBI CTAG 1 cut(s) 939
GluI GCNGC 3 cut(s) 201, 267, 857
HapII CCGG 3 cut(s) 599, 971, 986
HgaI GACGC 1 cut(s) 26
Hin1I GRCGYC 1 cut(s) 18
Hin1II CATG 8 cut(s) 37, 257, 370, 624, 784, 866, 883, 997
HincII GTYRAC 1 cut(s) 31
HindII GTYRAC 1 cut(s) 31
HinfI GANTC 2 cut(s) 8, 602
HpaII CCGG 3 cut(s) 599, 971, 986
HphI GGTGA 2 cut(s) 508, 856
Hpy166II GTNNAC 1 cut(s) 31
Hpy188I TCNGA 6 cut(s) 321, 607, 687, 929, 1002, 1037
Hpy188III TCNNGA 6 cut(s) 143, 194, 254, 281, 599, 1018
Hpy8I GTNNAC 1 cut(s) 31
HpyAV CCTTC 2 cut(s) 306, 698
HpyCH4III ACNGT 2 cut(s) 767, 918
HpyCH4IV ACGT 1 cut(s) 137
HpyCH4V TGCA 8 cut(s) 128, 228, 356, 366, 459, 624, 866, 963
HpyF10VI GCNNNNNNNGC 2 cut(s) 544, 942
HpyF3I CTNAG 3 cut(s) 719, 814, 1034
HpySE526I ACGT 1 cut(s) 137
Hsp92I GRCGYC 1 cut(s) 18
Hsp92II CATG 8 cut(s) 37, 257, 370, 624, 784, 866, 883, 997
Kpn2I TCCGGA 1 cut(s) 598
Kzo9I GATC 6 cut(s) 42, 286, 316, 321, 783, 836
LmnI GCTCC 6 cut(s) 219, 263, 544, 853, 942, 973
Lsp1109I GCAGC 3 cut(s) 212, 253, 868
LweI GCATC 1 cut(s) 972
MaeI CTAG 1 cut(s) 939
MaeII ACGT 1 cut(s) 137
MaeIII GTNAC 4 cut(s) 373, 560, 714, 844
MalI GATC 6 cut(s) 44, 288, 318, 323, 785, 838
MboI GATC 6 cut(s) 42, 286, 316, 321, 783, 836
MboII GAAGA 4 cut(s) 52, 650, 813, 883
MflI RGATCY 2 cut(s) 42, 321
MhlI GDGCHC 4 cut(s) 466, 653, 938, 947
MluCI AATT 2 cut(s) 337, 678
MluI ACGCGT 1 cut(s) 424
MlyI GAGTC 1 cut(s) 611
MmeI TCCRAC 3 cut(s) 585, 615, 774
MnlI CCTC 6 cut(s) 255, 568, 636, 763, 814, 844
MroI TCCGGA 1 cut(s) 598
MseI TTAA 2 cut(s) 672, 681
MslI CAYNNNNRTG 2 cut(s) 371, 721
MspA1I CMGCKG 1 cut(s) 380
MspI CCGG 3 cut(s) 599, 971, 986
MspR9I CCNGG 4 cut(s) 249, 827, 971, 986
MvaI CCWGG 2 cut(s) 249, 827
MvnI CGCG 1 cut(s) 426
MwoI GCNNNNNNNGC 2 cut(s) 544, 942
NciI CCSGG 2 cut(s) 971, 986
NcoI CCATGG 1 cut(s) 879
NdeI CATATG 1 cut(s) 162
NdeII GATC 6 cut(s) 42, 286, 316, 321, 783, 836
NlaIII CATG 8 cut(s) 37, 257, 370, 624, 784, 866, 883, 997
NlaIV GGNNCC 2 cut(s) 113, 944
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 3 cut(s) 373, 714, 844
NspI RCATGY 2 cut(s) 624, 866
NspV TTCGAA 1 cut(s) 73
OliI CACNNNNGTG 1 cut(s) 721
PaeI GCATGC 1 cut(s) 624
PagI TCATGA 1 cut(s) 253
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PfeI GAWTC 1 cut(s) 8
PflFI GACNNNGTC 2 cut(s) 20, 918
PkrI GCNGC 3 cut(s) 202, 268, 858
PleI GAGTC 1 cut(s) 610
PpsI GAGTC 1 cut(s) 610
Ppu21I YACGTR 1 cut(s) 138
PshBI ATTAAT 1 cut(s) 681
PsiI TTATAA 2 cut(s) 489, 1042
Psp124BI GAGCTC 1 cut(s) 653
Psp6I CCWGG 2 cut(s) 247, 825
PspGI CCWGG 2 cut(s) 247, 825
PspN4I GGNNCC 2 cut(s) 113, 944
PspPI GGNCC 4 cut(s) 112, 242, 474, 823
PsuI RGATCY 2 cut(s) 42, 321
PsyI GACNNNGTC 2 cut(s) 20, 918
RsaI GTAC 1 cut(s) 887
RsaNI GTAC 1 cut(s) 886
RseI CAYNNNNRTG 2 cut(s) 371, 721
SacI GAGCTC 1 cut(s) 653
SaqAI TTAA 2 cut(s) 672, 681
SatI GCNGC 3 cut(s) 201, 267, 857
Sau3AI GATC 6 cut(s) 42, 286, 316, 321, 783, 836
Sau96I GGNCC 4 cut(s) 112, 242, 474, 823
ScaI AGTACT 1 cut(s) 887
SchI GAGTC 1 cut(s) 611
ScrFI CCNGG 4 cut(s) 249, 827, 971, 986
SduI GDGCHC 4 cut(s) 466, 653, 938, 947
SfaNI GCATC 1 cut(s) 972
SfuI TTCGAA 1 cut(s) 73
SinI GGWCC 4 cut(s) 112, 242, 474, 823
SmiMI CAYNNNNRTG 2 cut(s) 371, 721
SphI GCATGC 1 cut(s) 624
Sse9I AATT 2 cut(s) 337, 678
SsiI CCGC 2 cut(s) 54, 380
SspMI CTAG 1 cut(s) 939
SstI GAGCTC 1 cut(s) 653
StyD4I CCNGG 4 cut(s) 247, 825, 969, 984
StyI CCWWGG 3 cut(s) 175, 879, 938
TaaI ACNGT 2 cut(s) 767, 918
TaiI ACGT 1 cut(s) 140
TaqI TCGA 3 cut(s) 73, 272, 839
TaqII GACCGA 1 cut(s) 491
TasI AATT 2 cut(s) 337, 678
TatI WGTACW 1 cut(s) 885
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 2 cut(s) 672, 681
Tru9I TTAA 2 cut(s) 672, 681
TseFI GTSAC 3 cut(s) 373, 714, 844
TseI GCWGC 3 cut(s) 200, 266, 856
Tsp45I GTSAC 3 cut(s) 373, 714, 844
TspGWI ACGGA 2 cut(s) 16, 85
Tth111I GACNNNGTC 2 cut(s) 20, 918
VpaK11BI GGWCC 4 cut(s) 112, 242, 474, 823
VspI ATTAAT 1 cut(s) 681
XapI RAATTY 1 cut(s) 337
XceI RCATGY 2 cut(s) 624, 866
XmaJI CCTAGG 1 cut(s) 938
XspI CTAG 1 cut(s) 939
ZrmI AGTACT 1 cut(s) 887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.