F-box kelch-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Bromodomain | PF00439 | 137 - 216 | 8.1e-21 | Bromodomain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 346, 1882 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 257, 1322 |
| AciI | CCGC | 1 cut(s) | 452 |
| AclWI | GGATC | 4 cut(s) | 843, 1002, 1423, 1803 |
| AcsI | RAATTY | 4 cut(s) | 253, 716, 1349, 1664 |
| AcuI | CTGAAG | 2 cut(s) | 545, 1512 |
| AfaI | GTAC | 3 cut(s) | 910, 1219, 1872 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 257, 472, 760, 1265, 1322, 1412, 1619 |
| AgsI | TTSAA | 4 cut(s) | 332, 613, 688, 1402 |
| AhlI | ACTAGT | 2 cut(s) | 293, 1214 |
| AjnI | CCWGG | 4 cut(s) | 306, 875, 1083, 1557 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 134, 166 |
| Alw21I | GWGCWC | 2 cut(s) | 1231, 1765 |
| Alw26I | GTCTC | 3 cut(s) | 1181, 1539, 1851 |
| AlwI | GGATC | 4 cut(s) | 843, 1002, 1423, 1803 |
| AoxI | GGCC | 1 cut(s) | 1651 |
| ApeKI | GCWGC | 5 cut(s) | 224, 1250, 1253, 1312, 1587 |
| ApoI | RAATTY | 4 cut(s) | 253, 716, 1349, 1664 |
| AspLEI | GCGC | 1 cut(s) | 1612 |
| AspS9I | GGNCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| AsuHPI | GGTGA | 5 cut(s) | 240, 296, 1337, 1515, 1835 |
| AsuII | TTCGAA | 1 cut(s) | 972 |
| AvaII | GGWCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| BanII | GRGCYC | 2 cut(s) | 59, 1765 |
| BbsI | GAAGAC | 3 cut(s) | 84, 203, 1295 |
| Bbv12I | GWGCWC | 2 cut(s) | 1231, 1765 |
| BbvCI | CCTCAGC | 1 cut(s) | 619 |
| BbvI | GCAGC | 5 cut(s) | 211, 1237, 1265, 1299, 1574 |
| BccI | CCATC | 2 cut(s) | 947, 1324 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1061, 1095 |
| BciT130I | CCWGG | 4 cut(s) | 308, 877, 1085, 1559 |
| BclI | TGATCA | 3 cut(s) | 160, 301, 349 |
| BcoDI | GTCTC | 3 cut(s) | 1181, 1539, 1851 |
| BcuI | ACTAGT | 2 cut(s) | 293, 1214 |
| BfaI | CTAG | 9 cut(s) | 99, 126, 177, 294, 729, 887, 1155, 1215, 1686 |
| BfmI | CTRYAG | 4 cut(s) | 422, 1096, 1251, 1423 |
| BfoI | RGCGCY | 1 cut(s) | 1613 |
| BfuAI | ACCTGC | 2 cut(s) | 346, 1882 |
| BglII | AGATCT | 1 cut(s) | 959 |
| BisI | GCNGC | 5 cut(s) | 225, 1251, 1254, 1313, 1588 |
| BlsI | GCNGC | 5 cut(s) | 226, 1252, 1255, 1314, 1589 |
| Bme1390I | CCNGG | 4 cut(s) | 308, 877, 1085, 1559 |
| Bme18I | GGWCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| BmgT120I | GGNCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| BmiI | GGNNCC | 4 cut(s) | 456, 520, 752, 1445 |
| BmrFI | CCNGG | 4 cut(s) | 308, 877, 1085, 1559 |
| BmsI | GCATC | 3 cut(s) | 568, 890, 1282 |
| BpiI | GAAGAC | 3 cut(s) | 84, 203, 1295 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1752, 1784 |
| BpmI | CTGGAG | 1 cut(s) | 1590 |
| Bpu10I | CCTNAGC | 1 cut(s) | 619 |
| Bpu14I | TTCGAA | 1 cut(s) | 972 |
| BpuEI | CTTGAG | 3 cut(s) | 422, 1088, 1632 |
| Bsa29I | ATCGAT | 1 cut(s) | 1798 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1392 |
| BsaJI | CCNNGG | 3 cut(s) | 811, 1001, 1486 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 257, 472, 760, 1265, 1322, 1412, 1619 |
| Bse3DI | GCAATG | 2 cut(s) | 609, 1479 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1392 |
| BseBI | CCWGG | 4 cut(s) | 308, 877, 1085, 1559 |
| BseCI | ATCGAT | 1 cut(s) | 1798 |
| BseDI | CCNNGG | 3 cut(s) | 811, 1001, 1486 |
| BseGI | GGATG | 4 cut(s) | 905, 1178, 1273, 1316 |
| BseJI | GATNNNNATC | 1 cut(s) | 1392 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 257, 472, 760, 1265, 1322, 1412, 1619 |
| BseMI | GCAATG | 2 cut(s) | 609, 1479 |
| BseMII | CTCAG | 5 cut(s) | 633, 690, 735, 1030, 1550 |
| BseRI | GAGGAG | 2 cut(s) | 442, 1635 |
| BseXI | GCAGC | 5 cut(s) | 211, 1237, 1265, 1299, 1574 |
| BsgI | GTGCAG | 1 cut(s) | 1573 |
| BshFI | GGCC | 1 cut(s) | 1653 |
| BshVI | ATCGAT | 1 cut(s) | 1798 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1231, 1765 |
| BslFI | GGGAC | 3 cut(s) | 532, 736, 955 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 257, 472, 760, 1265, 1322, 1412, 1619 |
| BsmAI | GTCTC | 3 cut(s) | 1181, 1539, 1851 |
| BsmFI | GGGAC | 3 cut(s) | 532, 736, 955 |
| BsmI | GAATGC | 2 cut(s) | 604, 1739 |
| BsnI | GGCC | 1 cut(s) | 1653 |
| Bsp119I | TTCGAA | 1 cut(s) | 972 |
| Bsp1286I | GDGCHC | 3 cut(s) | 59, 1231, 1765 |
| BspACI | CCGC | 1 cut(s) | 452 |
| BspANI | GGCC | 1 cut(s) | 1653 |
| BspCNI | CTCAG | 5 cut(s) | 632, 691, 734, 1029, 1549 |
| BspDI | ATCGAT | 1 cut(s) | 1798 |
| BspHI | TCATGA | 2 cut(s) | 1284, 1660 |
| BspLI | GGNNCC | 4 cut(s) | 456, 520, 752, 1445 |
| BspMAI | CTGCAG | 2 cut(s) | 1255, 1427 |
| BspMI | ACCTGC | 2 cut(s) | 346, 1882 |
| BspPI | GGATC | 4 cut(s) | 843, 1002, 1423, 1803 |
| BspQI | GCTCTTC | 3 cut(s) | 47, 137, 495 |
| BspT104I | TTCGAA | 1 cut(s) | 972 |
| BsrDI | GCAATG | 2 cut(s) | 609, 1479 |
| BssECI | CCNNGG | 3 cut(s) | 811, 1001, 1486 |
| BssT1I | CCWWGG | 3 cut(s) | 811, 1001, 1486 |
| Bst2UI | CCWGG | 4 cut(s) | 308, 877, 1085, 1559 |
| Bst4CI | ACNGT | 3 cut(s) | 913, 1512, 1734 |
| Bst6I | CTCTTC | 3 cut(s) | 47, 137, 495 |
| BstBI | TTCGAA | 1 cut(s) | 972 |
| BstC8I | GCNNGC | 2 cut(s) | 646, 1271 |
| BstEII | GGTNACC | 1 cut(s) | 1325 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1617 |
| BstF5I | GGATG | 4 cut(s) | 905, 1178, 1273, 1316 |
| BstH2I | RGCGCY | 1 cut(s) | 1613 |
| BstHHI | GCGC | 1 cut(s) | 1612 |
| BstMAI | GTCTC | 3 cut(s) | 1181, 1539, 1851 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 233, 242, 371, 391, 571, 853, 1250 |
| BstNI | CCWGG | 4 cut(s) | 308, 877, 1085, 1559 |
| BstNSI | RCATGY | 2 cut(s) | 1076, 1346 |
| BstPI | GGTNACC | 1 cut(s) | 1325 |
| BstSCI | CCNGG | 4 cut(s) | 306, 875, 1083, 1557 |
| BstSFI | CTRYAG | 4 cut(s) | 422, 1096, 1251, 1423 |
| BstV1I | GCAGC | 5 cut(s) | 211, 1237, 1265, 1299, 1574 |
| BstV2I | GAAGAC | 3 cut(s) | 84, 203, 1295 |
| BstX2I | RGATCY | 2 cut(s) | 959, 1007 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1091 |
| BstYI | RGATCY | 2 cut(s) | 959, 1007 |
| Bsu15I | ATCGAT | 1 cut(s) | 1798 |
| BsuRI | GGCC | 1 cut(s) | 1653 |
| BsuTUI | ATCGAT | 1 cut(s) | 1798 |
| BtsCI | GGATG | 4 cut(s) | 905, 1178, 1273, 1316 |
| BtsIMutI | CAGTG | 4 cut(s) | 1024, 1050, 1327, 1410 |
| BveI | ACCTGC | 2 cut(s) | 346, 1882 |
| Cac8I | GCNNGC | 2 cut(s) | 646, 1271 |
| CciI | TCATGA | 2 cut(s) | 1284, 1660 |
| CfoI | GCGC | 1 cut(s) | 1612 |
| Cfr13I | GGNCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| ClaI | ATCGAT | 1 cut(s) | 1798 |
| CseI | GACGC | 1 cut(s) | 993 |
| CsiI | ACCWGGT | 1 cut(s) | 306 |
| Csp6I | GTAC | 3 cut(s) | 909, 1218, 1871 |
| CviQI | GTAC | 3 cut(s) | 909, 1218, 1871 |
| Eam1104I | CTCTTC | 3 cut(s) | 47, 137, 495 |
| EarI | CTCTTC | 3 cut(s) | 47, 137, 495 |
| Ecl136II | GAGCTC | 1 cut(s) | 1763 |
| Eco130I | CCWWGG | 3 cut(s) | 811, 1001, 1486 |
| Eco24I | GRGCYC | 2 cut(s) | 59, 1765 |
| Eco47I | GGWCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| Eco53kI | GAGCTC | 1 cut(s) | 1763 |
| Eco57I | CTGAAG | 2 cut(s) | 545, 1512 |
| Eco91I | GGTNACC | 1 cut(s) | 1325 |
| EcoICRI | GAGCTC | 1 cut(s) | 1763 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1617 |
| EcoO109I | RGGNCCY | 1 cut(s) | 750 |
| EcoO65I | GGTNACC | 1 cut(s) | 1325 |
| EcoRI | GAATTC | 1 cut(s) | 716 |
| EcoRII | CCWGG | 4 cut(s) | 306, 875, 1083, 1557 |
| EcoT14I | CCWWGG | 3 cut(s) | 811, 1001, 1486 |
| EcoT22I | ATGCAT | 2 cut(s) | 583, 609 |
| EcoT38I | GRGCYC | 2 cut(s) | 59, 1765 |
| ErhI | CCWWGG | 3 cut(s) | 811, 1001, 1486 |
| FaqI | GGGAC | 3 cut(s) | 532, 736, 955 |
| FbaI | TGATCA | 3 cut(s) | 160, 301, 349 |
| Fnu4HI | GCNGC | 5 cut(s) | 225, 1251, 1254, 1313, 1588 |
| FokI | GGATG | 4 cut(s) | 912, 1185, 1260, 1303 |
| FriOI | GRGCYC | 2 cut(s) | 59, 1765 |
| Fsp4HI | GCNGC | 5 cut(s) | 225, 1251, 1254, 1313, 1588 |
| FspBI | CTAG | 9 cut(s) | 99, 126, 177, 294, 729, 887, 1155, 1215, 1686 |
| GlaI | GCGC | 1 cut(s) | 1611 |
| GluI | GCNGC | 5 cut(s) | 225, 1251, 1254, 1313, 1588 |
| GsuI | CTGGAG | 1 cut(s) | 1590 |
| HaeII | RGCGCY | 1 cut(s) | 1613 |
| HaeIII | GGCC | 1 cut(s) | 1653 |
| HgaI | GACGC | 1 cut(s) | 993 |
| HhaI | GCGC | 1 cut(s) | 1612 |
| Hin6I | GCGC | 1 cut(s) | 1610 |
| HinP1I | GCGC | 1 cut(s) | 1610 |
| HincII | GTYRAC | 2 cut(s) | 463, 1467 |
| HindII | GTYRAC | 2 cut(s) | 463, 1467 |
| HindIII | AAGCTT | 2 cut(s) | 1105, 1672 |
| HinfI | GANTC | 8 cut(s) | 204, 710, 1028, 1375, 1388, 1532, 1603, 1800 |
| HpaI | GTTAAC | 1 cut(s) | 463 |
| HphI | GGTGA | 5 cut(s) | 240, 296, 1337, 1515, 1835 |
| Hpy166II | GTNNAC | 3 cut(s) | 463, 1467, 1826 |
| Hpy188I | TCNGA | 5 cut(s) | 715, 724, 1420, 1531, 1840 |
| Hpy188III | TCNNGA | 7 cut(s) | 278, 413, 479, 698, 1285, 1661, 1793 |
| Hpy8I | GTNNAC | 3 cut(s) | 463, 1467, 1826 |
| Hpy99I | CGWCG | 1 cut(s) | 987 |
| HpyAV | CCTTC | 5 cut(s) | 79, 536, 664, 1021, 1536 |
| HpyCH4III | ACNGT | 3 cut(s) | 913, 1512, 1734 |
| HpyCH4IV | ACGT | 1 cut(s) | 1043 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 233, 242, 371, 391, 571, 853, 1250 |
| HpySE526I | ACGT | 1 cut(s) | 1043 |
| HspAI | GCGC | 1 cut(s) | 1610 |
| Ksp22I | TGATCA | 3 cut(s) | 160, 301, 349 |
| KspAI | GTTAAC | 1 cut(s) | 463 |
| LguI | GCTCTTC | 3 cut(s) | 47, 137, 495 |
| LmnI | GCTCC | 2 cut(s) | 454, 653 |
| Lsp1109I | GCAGC | 5 cut(s) | 211, 1237, 1265, 1299, 1574 |
| LweI | GCATC | 3 cut(s) | 568, 890, 1282 |
| MabI | ACCWGGT | 1 cut(s) | 306 |
| MaeI | CTAG | 9 cut(s) | 99, 126, 177, 294, 729, 887, 1155, 1215, 1686 |
| MaeII | ACGT | 1 cut(s) | 1043 |
| MaeIII | GTNAC | 6 cut(s) | 589, 771, 913, 1193, 1325, 1849 |
| MflI | RGATCY | 2 cut(s) | 959, 1007 |
| MhlI | GDGCHC | 3 cut(s) | 59, 1231, 1765 |
| MlyI | GAGTC | 5 cut(s) | 198, 719, 1037, 1541, 1597 |
| MmeI | TCCRAC | 4 cut(s) | 687, 745, 1204, 1365 |
| Mph1103I | ATGCAT | 2 cut(s) | 583, 609 |
| MseI | TTAA | 3 cut(s) | 462, 869, 1817 |
| MslI | CAYNNNNRTG | 2 cut(s) | 778, 1368 |
| MspA1I | CMGCKG | 1 cut(s) | 1312 |
| MspR9I | CCNGG | 4 cut(s) | 308, 877, 1085, 1559 |
| Mva1269I | GAATGC | 2 cut(s) | 604, 1739 |
| MvaI | CCWGG | 4 cut(s) | 308, 877, 1085, 1559 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 233, 242, 371, 391, 571, 853, 1250 |
| NlaIV | GGNNCC | 4 cut(s) | 456, 520, 752, 1445 |
| NmuCI | GTSAC | 3 cut(s) | 771, 1193, 1325 |
| NsiI | ATGCAT | 2 cut(s) | 583, 609 |
| NspI | RCATGY | 2 cut(s) | 1076, 1346 |
| NspV | TTCGAA | 1 cut(s) | 972 |
| PagI | TCATGA | 2 cut(s) | 1284, 1660 |
| PciSI | GCTCTTC | 3 cut(s) | 47, 137, 495 |
| PctI | GAATGC | 2 cut(s) | 604, 1739 |
| PfeI | GAWTC | 3 cut(s) | 1375, 1388, 1800 |
| PflFI | GACNNNGTC | 1 cut(s) | 1709 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 257, 1322 |
| PkrI | GCNGC | 5 cut(s) | 226, 1252, 1255, 1314, 1589 |
| PleI | GAGTC | 5 cut(s) | 198, 718, 1036, 1540, 1597 |
| PpsI | GAGTC | 5 cut(s) | 198, 718, 1036, 1540, 1597 |
| PpuMI | RGGWCCY | 1 cut(s) | 750 |
| Psp124BI | GAGCTC | 1 cut(s) | 1765 |
| Psp5II | RGGWCCY | 1 cut(s) | 750 |
| Psp6I | CCWGG | 4 cut(s) | 306, 875, 1083, 1557 |
| PspEI | GGTNACC | 1 cut(s) | 1325 |
| PspGI | CCWGG | 4 cut(s) | 306, 875, 1083, 1557 |
| PspN4I | GGNNCC | 4 cut(s) | 456, 520, 752, 1445 |
| PspPI | GGNCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| PspPPI | RGGWCCY | 1 cut(s) | 750 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1765, 1797 |
| PstI | CTGCAG | 2 cut(s) | 1255, 1427 |
| PsuI | RGATCY | 2 cut(s) | 959, 1007 |
| PsyI | GACNNNGTC | 1 cut(s) | 1709 |
| PvuII | CAGCTG | 1 cut(s) | 1312 |
| RsaI | GTAC | 3 cut(s) | 910, 1219, 1872 |
| RsaNI | GTAC | 3 cut(s) | 909, 1218, 1871 |
| RseI | CAYNNNNRTG | 2 cut(s) | 778, 1368 |
| SacI | GAGCTC | 1 cut(s) | 1765 |
| SapI | GCTCTTC | 3 cut(s) | 47, 137, 495 |
| SaqAI | TTAA | 3 cut(s) | 462, 869, 1817 |
| SatI | GCNGC | 5 cut(s) | 225, 1251, 1254, 1313, 1588 |
| Sau96I | GGNCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| SchI | GAGTC | 5 cut(s) | 198, 719, 1037, 1541, 1597 |
| ScrFI | CCNGG | 4 cut(s) | 308, 877, 1085, 1559 |
| SduI | GDGCHC | 3 cut(s) | 59, 1231, 1765 |
| SexAI | ACCWGGT | 1 cut(s) | 306 |
| SfaNI | GCATC | 3 cut(s) | 568, 890, 1282 |
| SfcI | CTRYAG | 4 cut(s) | 422, 1096, 1251, 1423 |
| SfuI | TTCGAA | 1 cut(s) | 972 |
| SinI | GGWCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 778, 1368 |
| SmlI | CTYRAG | 3 cut(s) | 401, 1067, 1647 |
| SmoI | CTYRAG | 3 cut(s) | 401, 1067, 1647 |
| SpeI | ACTAGT | 2 cut(s) | 293, 1214 |
| SsiI | CCGC | 1 cut(s) | 452 |
| SspI | AATATT | 1 cut(s) | 447 |
| SspMI | CTAG | 9 cut(s) | 99, 126, 177, 294, 729, 887, 1155, 1215, 1686 |
| SstI | GAGCTC | 1 cut(s) | 1765 |
| StyD4I | CCNGG | 4 cut(s) | 306, 875, 1083, 1557 |
| StyI | CCWWGG | 3 cut(s) | 811, 1001, 1486 |
| TaaI | ACNGT | 3 cut(s) | 913, 1512, 1734 |
| TaiI | ACGT | 1 cut(s) | 1046 |
| TaqI | TCGA | 7 cut(s) | 498, 972, 982, 997, 1729, 1743, 1798 |
| TfiI | GAWTC | 3 cut(s) | 1375, 1388, 1800 |
| Tru1I | TTAA | 3 cut(s) | 462, 869, 1817 |
| Tru9I | TTAA | 3 cut(s) | 462, 869, 1817 |
| TscAI | CASTG | 4 cut(s) | 1024, 1057, 1327, 1417 |
| TseFI | GTSAC | 3 cut(s) | 771, 1193, 1325 |
| TseI | GCWGC | 5 cut(s) | 224, 1250, 1253, 1312, 1587 |
| Tsp45I | GTSAC | 3 cut(s) | 771, 1193, 1325 |
| TspRI | CASTG | 4 cut(s) | 1024, 1057, 1327, 1417 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1709 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 257, 1322 |
| VpaK11BI | GGWCC | 5 cut(s) | 167, 260, 519, 750, 1133 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1617 |
| XapI | RAATTY | 4 cut(s) | 253, 716, 1349, 1664 |
| XceI | RCATGY | 2 cut(s) | 1076, 1346 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 761 |
| XspI | CTAG | 9 cut(s) | 99, 126, 177, 294, 729, 887, 1155, 1215, 1686 |
| Zsp2I | ATGCAT | 2 cut(s) | 583, 609 |