FvH4_1g18430

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000082
Physical Location & Seq
Forward (+)
10740802 .. 10742201
1400 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g18430.t1

Sequence Viewer

Length: 1173 bp
ATGAGCAAGAGGAGGAAATTAGGAATGACAGAAAATTACCTACCAGAAGACATCATTGTGAAAATCCTCCACAGGGTTCCCCTAAAACCCCTAATACGATTCAGCACTGTTTCGAAAGGCTGGCATTCCATTATATTTGCCGACCCTCAATTCAAGAAATCCCATACGAAATTTGCTTCTGCGCAGCAAACCCTCAGTCGAAGACTCCTCTATTCCACGGCCTCTCAAGTTGAATCCTTAGACTTGGAGGCGCCGTCGTTTGGAGACACTTCTTCCGTCAGAAAGCTCAGCTGCCCCTTCAATAAACACGGGAATCGTATCAAGCTACTAGGCTCCTGTAATGGCTTGGTATGTGTAGCTCTTGAGTCTACGCGAAACTTGTATATTTGGAACCCAACAAACGGATTCTTCCAAAAGTTACCCGACCCTGGTTTCTCCCAAGAAGATAATATTGTGGTTTACTCTGGTTTAGGGCATTTGTCAGCCACAGACGACTACAAAGTTATAGTTGCCGCCGGTAGAGCTAGAAGCAGAGATCGCCGCAAACTCTATTTGCAGCGGGACGAGATCAAGGAGGTGAAGATATTCTCATTAAGGTCTAAGTTATGGATTGAACTGATCCCTCCACGCTTGACCCTTGAGCGTCAGGGGACTTTGTGCAATGAGGCACTTCATTGGTTGCATTGCAAAAGTATCGTTGTTTTTGATTTGGCCAAGGAAGAGTTCAGGCTAATGCCGCTGCCTGATTGTCTCGTTCGTAGACAGTTTTATATCCGTCTTGGCGTTTCATCTGGAGGATGCCTGTGTGTGACGCATATCTTCAATTCTGAAAACTCTATTGAGTTGTGGGTGATGAGAAAATATGGCGTGCGTGAATCTTGGACTAAGCTCTTTAACTGTAACATTGCCGAACGGCCGCGTGGGACGTATGTCAGTCGACCAATCCTGGTTACGGAGAGTATACTTTTTATGTTTATATGGGATTGGGATAACAGGTTGGTCTTGAAGATCGATCATGAACAAGGGATAGTAGGCCAATATATGTTTCCTAAGGTTGACATGATTGAAAGAATTGTGCCTAATGTGATCCAATATATGATTGGATACGAAGAGAGTTCAGTTTGGCTTAGTGATTACCATGCATGTAGTGAAAGAGAAGAAGAAGGTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

391

Amino Acids

45.16

Weight (kDa)

9.05

Isoelectric Point (pI)

51.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 13 - 48 5.5e-06 F-box-like
F-box PF00646 14 - 45 4.7e-08 F-box domain
FBA_3 PF08268 84 - 296 1.1e-14 F-box associated beta propeller domain
FBA_1 PF07734 95 - 354 6.6e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 250
AccI GTMKAC 4 cut(s) 368, 760, 937, 961
AccII CGCG 2 cut(s) 373, 919
AciI CCGC 5 cut(s) 513, 541, 559, 737, 917
AclWI GGATC 2 cut(s) 613, 1081
AcoI YGGCCR 2 cut(s) 711, 914
AcsI RAATTY 1 cut(s) 170
AcyI GRCGYC 1 cut(s) 251
AfiI CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 952
AgsI TTSAA 7 cut(s) 154, 233, 301, 614, 823, 1006, 1067
AjnI CCWGG 2 cut(s) 427, 945
AjuI GAANNNNNNNTTGG 4 cut(s) 707, 739, 1029, 1061
AluBI AGCT 6 cut(s) 286, 291, 325, 359, 524, 889
AluI AGCT 6 cut(s) 286, 291, 325, 359, 524, 889
Alw26I GTCTC 2 cut(s) 258, 755
AlwI GGATC 2 cut(s) 613, 1081
AoxI GGCC 4 cut(s) 219, 711, 914, 1033
ApeKI GCWGC 4 cut(s) 184, 291, 556, 739
ApoI RAATTY 1 cut(s) 170
ArsI GACNNNNNNTTYG 2 cut(s) 181, 213
Asp700I GAANNNNTTC 1 cut(s) 584
AspLEI GCGC 2 cut(s) 184, 253
AsuHPI GGTGA 2 cut(s) 589, 862
AsuII TTCGAA 1 cut(s) 113
AxyI CCTNAGG 1 cut(s) 1050
BalI TGGCCA 1 cut(s) 713
BanI GGYRCC 1 cut(s) 250
BbsI GAAGAC 2 cut(s) 54, 208
BbvI GCAGC 4 cut(s) 196, 278, 568, 726
BceAI ACGGC 3 cut(s) 234, 238, 929
BcgI CGANNNNNNTGC 2 cut(s) 676, 710
BciT130I CCWGG 2 cut(s) 429, 947
BciVI GTATCC 1 cut(s) 1097
BcoDI GTCTC 2 cut(s) 258, 755
BfaI CTAG 2 cut(s) 329, 525
BfoI RGCGCY 1 cut(s) 254
BfuI GTATCC 1 cut(s) 1097
BisI GCNGC 8 cut(s) 185, 292, 513, 541, 557, 737, 740, 917
BlpI GCTNAGC 1 cut(s) 287
BlsI GCNGC 8 cut(s) 186, 293, 514, 542, 558, 738, 741, 918
Bme1390I CCNGG 2 cut(s) 429, 947
BmiI GGNNCC 4 cut(s) 78, 252, 334, 392
BmrFI CCNGG 2 cut(s) 429, 947
BmsI GCATC 1 cut(s) 788
BoxI GACNNNNGTC 1 cut(s) 929
BpiI GAAGAC 2 cut(s) 54, 208
BpmI CTGGAG 1 cut(s) 813
Bpu1102I GCTNAGC 1 cut(s) 287
Bpu14I TTCGAA 1 cut(s) 113
BpuEI CTTGAG 3 cut(s) 210, 383, 659
Bsa29I ATCGAT 1 cut(s) 1011
BsaHI GRCGYC 1 cut(s) 251
BsaJI CCNNGG 3 cut(s) 216, 427, 714
BsaXI ACNNNNNCTCC 2 cut(s) 239, 269
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 952
Bse118I RCCGGY 1 cut(s) 515
Bse21I CCTNAGG 1 cut(s) 1050
Bse3DI GCAATG 3 cut(s) 667, 682, 903
BseBI CCWGG 2 cut(s) 429, 947
BseCI ATCGAT 1 cut(s) 1011
BseDI CCNNGG 3 cut(s) 216, 427, 714
BseGI GGATG 1 cut(s) 803
BseLI CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 952
BseMI GCAATG 3 cut(s) 667, 682, 903
BseMII CTCAG 2 cut(s) 208, 301
BseRI GAGGAG 2 cut(s) 25, 197
BseX3I CGGCCG 1 cut(s) 914
BseXI GCAGC 4 cut(s) 196, 278, 568, 726
Bsh1236I CGCG 2 cut(s) 373, 919
Bsh1285I CGRYCG 1 cut(s) 917
BshFI GGCC 4 cut(s) 221, 713, 916, 1035
BshNI GGYRCC 1 cut(s) 250
BshVI ATCGAT 1 cut(s) 1011
BsiEI CGRYCG 1 cut(s) 917
BsiSI CCGG 1 cut(s) 516
BslFI GGGAC 3 cut(s) 575, 664, 937
BslI CCNNNNNNNGG 5 cut(s) 73, 260, 401, 428, 952
BsmAI GTCTC 2 cut(s) 258, 755
BsmFI GGGAC 3 cut(s) 575, 664, 937
BsmI GAATGC 1 cut(s) 124
BsnI GGCC 4 cut(s) 221, 713, 916, 1035
Bsp119I TTCGAA 1 cut(s) 113
Bsp143I GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
Bsp1720I GCTNAGC 1 cut(s) 287
BspACI CCGC 5 cut(s) 513, 541, 559, 737, 917
BspANI GGCC 4 cut(s) 221, 713, 916, 1035
BspCNI CTCAG 2 cut(s) 207, 300
BspDI ATCGAT 1 cut(s) 1011
BspFNI CGCG 2 cut(s) 373, 919
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 4 cut(s) 78, 252, 334, 392
BspPI GGATC 2 cut(s) 613, 1081
BspT104I TTCGAA 1 cut(s) 113
BspT107I GGYRCC 1 cut(s) 250
BsrDI GCAATG 3 cut(s) 667, 682, 903
BsrFI RCCGGY 1 cut(s) 515
BssAI RCCGGY 1 cut(s) 515
BssECI CCNNGG 3 cut(s) 216, 427, 714
BssMI GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
BssNAI GTATAC 1 cut(s) 962
BssNI GRCGYC 1 cut(s) 251
BssT1I CCWWGG 1 cut(s) 714
Bst1107I GTATAC 1 cut(s) 962
Bst2UI CCWGG 2 cut(s) 429, 947
Bst4CI ACNGT 3 cut(s) 109, 765, 899
Bst6I CTCTTC 2 cut(s) 714, 1104
BstACI GRCGYC 1 cut(s) 251
BstBI TTCGAA 1 cut(s) 113
BstC8I GCNNGC 2 cut(s) 122, 869
BstDEI CTNAG 7 cut(s) 194, 238, 287, 600, 885, 1050, 1127
BstDSI CCRYGG 1 cut(s) 216
BstF5I GGATG 1 cut(s) 803
BstFNI CGCG 2 cut(s) 373, 919
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 2 cut(s) 184, 253
BstKTI GATC 6 cut(s) 538, 570, 621, 1011, 1015, 1089
BstMAI GTCTC 2 cut(s) 258, 755
BstMBI GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
BstMCI CGRYCG 1 cut(s) 917
BstMWI GCNNNNNNNGC 3 cut(s) 521, 537, 736
BstNI CCWGG 2 cut(s) 429, 947
BstNSI RCATGY 1 cut(s) 1146
BstPAI GACNNNNGTC 1 cut(s) 929
BstSCI CCNGG 2 cut(s) 427, 945
BstUI CGCG 2 cut(s) 373, 919
BstV1I GCAGC 4 cut(s) 196, 278, 568, 726
BstV2I GAAGAC 2 cut(s) 54, 208
BstZ17I GTATAC 1 cut(s) 962
BstZI CGGCCG 1 cut(s) 914
Bsu15I ATCGAT 1 cut(s) 1011
Bsu36I CCTNAGG 1 cut(s) 1050
BsuI GTATCC 1 cut(s) 1097
BsuRI GGCC 4 cut(s) 221, 713, 916, 1035
BsuTUI ATCGAT 1 cut(s) 1011
BtgI CCRYGG 1 cut(s) 216
BtsCI GGATG 1 cut(s) 803
BtsIMutI CAGTG 1 cut(s) 105
Cac8I GCNNGC 2 cut(s) 122, 869
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 2 cut(s) 184, 253
Cfr10I RCCGGY 1 cut(s) 515
ClaI ATCGAT 1 cut(s) 1011
CseI GACGC 2 cut(s) 632, 820
CviAII CATG 4 cut(s) 1016, 1060, 1139, 1143
DdeI CTNAG 7 cut(s) 194, 238, 287, 600, 885, 1050, 1127
DinI GGCGCC 1 cut(s) 252
DpnI GATC 6 cut(s) 537, 569, 620, 1010, 1014, 1088
DpnII GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
EaeI YGGCCR 2 cut(s) 711, 914
EagI CGGCCG 1 cut(s) 914
Eam1104I CTCTTC 2 cut(s) 714, 1104
EarI CTCTTC 2 cut(s) 714, 1104
EclXI CGGCCG 1 cut(s) 914
Eco130I CCWWGG 1 cut(s) 714
Eco52I CGGCCG 1 cut(s) 914
Eco81I CCTNAGG 1 cut(s) 1050
EcoRII CCWGG 2 cut(s) 427, 945
EcoT14I CCWWGG 1 cut(s) 714
EcoT22I ATGCAT 1 cut(s) 1144
EgeI GGCGCC 1 cut(s) 252
EheI GGCGCC 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 714
FaeI CATG 4 cut(s) 1019, 1063, 1142, 1146
FaqI GGGAC 3 cut(s) 575, 664, 937
FatI CATG 4 cut(s) 1015, 1059, 1138, 1142
FauI CCCGC 1 cut(s) 552
FblI GTMKAC 4 cut(s) 368, 760, 937, 961
Fnu4HI GCNGC 8 cut(s) 185, 292, 513, 541, 557, 737, 740, 917
FokI GGATG 1 cut(s) 810
Fsp4HI GCNGC 8 cut(s) 185, 292, 513, 541, 557, 737, 740, 917
FspBI CTAG 2 cut(s) 329, 525
FspI TGCGCA 1 cut(s) 183
GlaI GCGC 2 cut(s) 183, 252
GluI GCNGC 8 cut(s) 185, 292, 513, 541, 557, 737, 740, 917
GsuI CTGGAG 1 cut(s) 813
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 4 cut(s) 221, 713, 916, 1035
HapII CCGG 1 cut(s) 516
HgaI GACGC 2 cut(s) 632, 820
HhaI GCGC 2 cut(s) 184, 253
Hin1I GRCGYC 1 cut(s) 251
Hin1II CATG 4 cut(s) 1019, 1063, 1142, 1146
Hin6I GCGC 2 cut(s) 182, 251
HinP1I GCGC 2 cut(s) 182, 251
HincII GTYRAC 2 cut(s) 938, 1057
HindII GTYRAC 2 cut(s) 938, 1057
HinfI GANTC 7 cut(s) 99, 204, 233, 313, 365, 405, 875
HpaII CCGG 1 cut(s) 516
HphI GGTGA 2 cut(s) 589, 862
Hpy166II GTNNAC 6 cut(s) 369, 460, 761, 938, 962, 1057
Hpy188I TCNGA 2 cut(s) 281, 829
Hpy188III TCNNGA 5 cut(s) 154, 362, 792, 1003, 1016
Hpy8I GTNNAC 6 cut(s) 369, 460, 761, 938, 962, 1057
Hpy99I CGWCG 1 cut(s) 259
HpyAV CCTTC 2 cut(s) 307, 1157
HpyCH4III ACNGT 3 cut(s) 109, 765, 899
HpyCH4IV ACGT 1 cut(s) 926
HpyCH4V TGCA 5 cut(s) 556, 660, 682, 687, 1142
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 537, 736
HpyF3I CTNAG 7 cut(s) 194, 238, 287, 600, 885, 1050, 1127
HpySE526I ACGT 1 cut(s) 926
Hsp92I GRCGYC 1 cut(s) 251
Hsp92II CATG 4 cut(s) 1019, 1063, 1142, 1146
HspAI GCGC 2 cut(s) 182, 251
KasI GGCGCC 1 cut(s) 250
Kzo9I GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
LmnI GCTCC 1 cut(s) 338
Lsp1109I GCAGC 4 cut(s) 196, 278, 568, 726
LweI GCATC 1 cut(s) 788
MaeI CTAG 2 cut(s) 329, 525
MaeII ACGT 1 cut(s) 926
MaeIII GTNAC 4 cut(s) 417, 808, 899, 949
MalI GATC 6 cut(s) 537, 569, 620, 1010, 1014, 1088
MboI GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
MlsI TGGCCA 1 cut(s) 713
MluCI AATT 6 cut(s) 17, 34, 149, 170, 823, 1071
MluNI TGGCCA 1 cut(s) 713
Mly113I GGCGCC 1 cut(s) 251
MlyI GAGTC 2 cut(s) 198, 374
Mox20I TGGCCA 1 cut(s) 713
Mph1103I ATGCAT 1 cut(s) 1144
MroXI GAANNNNTTC 1 cut(s) 584
MscI TGGCCA 1 cut(s) 713
MseI TTAA 2 cut(s) 593, 894
MslI CAYNNNNRTG 1 cut(s) 56
Msp20I TGGCCA 1 cut(s) 713
MspA1I CMGCKG 3 cut(s) 291, 559, 739
MspI CCGG 1 cut(s) 516
MspR9I CCNGG 2 cut(s) 429, 947
Mva1269I GAATGC 1 cut(s) 124
MvaI CCWGG 2 cut(s) 429, 947
MvnI CGCG 2 cut(s) 373, 919
MwoI GCNNNNNNNGC 3 cut(s) 521, 537, 736
NarI GGCGCC 1 cut(s) 251
NdeII GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
NlaIII CATG 4 cut(s) 1019, 1063, 1142, 1146
NlaIV GGNNCC 4 cut(s) 78, 252, 334, 392
NmuCI GTSAC 1 cut(s) 808
NsbI TGCGCA 1 cut(s) 183
NsiI ATGCAT 1 cut(s) 1144
NspI RCATGY 1 cut(s) 1146
NspV TTCGAA 1 cut(s) 113
PagI TCATGA 1 cut(s) 1015
PctI GAATGC 1 cut(s) 124
PdmI GAANNNNTTC 1 cut(s) 584
PfeI GAWTC 5 cut(s) 99, 233, 313, 405, 875
PkrI GCNGC 8 cut(s) 186, 293, 514, 542, 558, 738, 741, 918
PleI GAGTC 2 cut(s) 198, 373
PluTI GGCGCC 1 cut(s) 254
PpsI GAGTC 2 cut(s) 198, 373
PshAI GACNNNNGTC 1 cut(s) 929
Psp6I CCWGG 2 cut(s) 427, 945
PspGI CCWGG 2 cut(s) 427, 945
PspN4I GGNNCC 4 cut(s) 78, 252, 334, 392
PvuII CAGCTG 1 cut(s) 291
RseI CAYNNNNRTG 1 cut(s) 56
SalI GTCGAC 1 cut(s) 936
SaqAI TTAA 2 cut(s) 593, 894
SatI GCNGC 8 cut(s) 185, 292, 513, 541, 557, 737, 740, 917
Sau3AI GATC 6 cut(s) 535, 567, 618, 1008, 1012, 1086
SchI GAGTC 2 cut(s) 198, 374
ScrFI CCNGG 2 cut(s) 429, 947
SfaNI GCATC 1 cut(s) 788
SfoI GGCGCC 1 cut(s) 252
SfuI TTCGAA 1 cut(s) 113
SmiMI CAYNNNNRTG 1 cut(s) 56
SmlI CTYRAG 3 cut(s) 225, 362, 638
SmoI CTYRAG 3 cut(s) 225, 362, 638
Sse9I AATT 6 cut(s) 17, 34, 149, 170, 823, 1071
SsiI CCGC 5 cut(s) 513, 541, 559, 737, 917
SspDI GGCGCC 1 cut(s) 250
SspI AATATT 1 cut(s) 451
SspMI CTAG 2 cut(s) 329, 525
StyD4I CCNGG 2 cut(s) 427, 945
StyI CCWWGG 1 cut(s) 714
TaaI ACNGT 3 cut(s) 109, 765, 899
TaiI ACGT 1 cut(s) 929
TaqI TCGA 4 cut(s) 113, 199, 937, 1011
TasI AATT 6 cut(s) 17, 34, 149, 170, 823, 1071
TauI GCSGC 4 cut(s) 515, 543, 739, 919
TfiI GAWTC 5 cut(s) 99, 233, 313, 405, 875
Tru1I TTAA 2 cut(s) 593, 894
Tru9I TTAA 2 cut(s) 593, 894
TscAI CASTG 1 cut(s) 112
TseFI GTSAC 1 cut(s) 808
TseI GCWGC 4 cut(s) 184, 291, 556, 739
Tsp45I GTSAC 1 cut(s) 808
TspDTI ATGAA 3 cut(s) 662, 777, 1032
TspGWI ACGGA 4 cut(s) 265, 417, 764, 968
TspRI CASTG 1 cut(s) 112
XapI RAATTY 1 cut(s) 170
XceI RCATGY 1 cut(s) 1146
XcmI CCANNNNNNNNNTGG 1 cut(s) 1097
XmiI GTMKAC 4 cut(s) 368, 760, 937, 961
XmnI GAANNNNTTC 1 cut(s) 584
XspI CTAG 2 cut(s) 329, 525
Zsp2I ATGCAT 1 cut(s) 1144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.