RchiOBHm_Chr5g0059551

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000082
Physical Location & Seq
Reverse (-)
64548132 .. 64549220
1089 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33615

Sequence Viewer

Length: 1089 bp
ATGGGCTCGTTCGCCACGGTGAATACCGATATGCGATTGTGCATCTTCGTGGGCTTACCGGAAGATTTGGTAGTGTTAATCTTGAAGAGGCTGCCGATCAAATCCCTAATTCGCTTCACCTGCGTTTCGAAACGCTGGCGCCTCATGATATTGTCCGACCCAAATTTCGCCAAATCCCAATTCCAGATAGCTTCCGAGCAGCAAACCCTGAGTCGCAGAGCCATCCATGAATCTGACTGTGAATCCCTAGACTTTGAGAAACCGATGGATTTCAGAAAGGTTCGGTGCCCATTCAAGCAACCGGGCCTTCATGTCAGAATACTGTGCTCCTGCAATGGTTTGGTATTTGCAGCTTCTAGCAATTCAGATATGTATATCTGGAACCCATCAACTGGCTTCTTCAAAAAATTACCTGACCCAGGTGCTCTTCCCTCTGCAATTCTATGGTTTTATGGTTTTGGCTATGTGTCCACCATTGACGACTACAAAGTTATTATCAGTTTTGATGTCTCTGGGAAGAAGATAGCAAAGGCTATGGTCTTCTCATCCAGAGCTAAGAGTTGGAAAACTATTGAAGTCCCTTACCATCCCGTCTTTTACCTGGGGAATCTTTTTAATGAGGCACTTCATTGGCGGATCTATCTTCATGGAGATATTGTTGCATTTGACTTGGCAAAGGAGCAGTTCCGAACAATGTCGCTGCCTGCTTCTCTTAACTACCACCATGGTGGTGTCCATATATCAAGTCTCGGTTCTGTTGGAGGATGCCTGTGTGTAATTATTCAAAAGAATGCTAATGATAGTTGCATTGATTTGTGGGTCATGAGAGAGTATGAGGTCGCAGACTCTTGGACTAAGCTCTATAACTTGAAGTTTTCGGATCAGCGTGAGTGGATAGCTGATTTGAGGCCGGTCTTGGCTACGGAAACTAGTACTTTTCTGGAGAAATGGAGTCATAGTTATAGGGGGTGTAAGTGCGAGTTGATAAGGATTGGCCTTAAGGAAGAGAAGATTGAAACATATATGGTTAGAAAGGAGCCTTTTTACGTGATTGCATATGAAGAGAGTCTACTTTGGCTAAATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

362

Amino Acids

41.66

Weight (kDa)

8.39

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 56 1.2e-09 F-box domain
F-box-like PF12937 18 - 53 4.4e-07 F-box-like
FBA_3 PF08268 94 - 287 4.9e-17 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 96 - 290 2.3e-06 KIB1-4 beta-propeller
FBA_1 PF07734 102 - 295 7e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 128
Acc36I ACCTGC 1 cut(s) 128
AccB1I GGYRCC 2 cut(s) 138, 285
AccB7I CCANNNNNTGG 1 cut(s) 392
AccI GTMKAC 1 cut(s) 1069
AciI CCGC 1 cut(s) 634
AclWI GGATC 2 cut(s) 644, 888
AcsI RAATTY 1 cut(s) 163
AcyI GRCGYC 1 cut(s) 139
AfaI GTAC 1 cut(s) 934
AfiI CCNNNNNNNGG 2 cut(s) 392, 419
AflII CTTAAG 1 cut(s) 998
AgsI TTSAA 7 cut(s) 85, 295, 403, 575, 785, 871, 1016
AhlI ACTAGT 1 cut(s) 929
AjnI CCWGG 2 cut(s) 418, 600
AjuI GAANNNNNNNTTGG 2 cut(s) 164, 196
AleI CACNNNNGTG 1 cut(s) 726
AluBI AGCT 5 cut(s) 191, 353, 554, 859, 899
AluI AGCT 5 cut(s) 191, 353, 554, 859, 899
Alw21I GWGCWC 2 cut(s) 329, 427
Alw26I GTCTC 2 cut(s) 514, 752
AlwI GGATC 2 cut(s) 644, 888
AoxI GGCC 3 cut(s) 304, 908, 994
ApeKI GCWGC 4 cut(s) 91, 199, 350, 700
ApoI RAATTY 1 cut(s) 163
ArsI GACNNNNNNTTYG 4 cut(s) 149, 181, 196, 228
AspLEI GCGC 1 cut(s) 141
AspS9I GGNCC 1 cut(s) 304
AsuC2I CCSGG 1 cut(s) 303
AsuHPI GGTGA 2 cut(s) 31, 109
AsuII TTCGAA 1 cut(s) 128
BaeGI GKGCMC 1 cut(s) 290
BanI GGYRCC 2 cut(s) 138, 285
BanII GRGCYC 1 cut(s) 8
BarI GAAGNNNNNNTAC 2 cut(s) 1053, 1085
BbsI GAAGAC 1 cut(s) 532
Bbv12I GWGCWC 2 cut(s) 329, 427
BbvI GCAGC 4 cut(s) 78, 211, 362, 687
BccI CCATC 4 cut(s) 230, 259, 394, 594
BciT130I CCWGG 2 cut(s) 420, 602
BcnI CCSGG 1 cut(s) 303
BcoDI GTCTC 2 cut(s) 514, 752
BcuI ACTAGT 1 cut(s) 929
BfaI CTAG 3 cut(s) 248, 357, 930
BfoI RGCGCY 1 cut(s) 142
BfrI CTTAAG 1 cut(s) 998
BfuAI ACCTGC 1 cut(s) 128
BisI GCNGC 4 cut(s) 92, 200, 351, 701
BlsI GCNGC 4 cut(s) 93, 201, 352, 702
BmcAI AGTACT 1 cut(s) 934
Bme1390I CCNGG 3 cut(s) 303, 420, 602
BmgT120I GGNCC 1 cut(s) 304
BmiI GGNNCC 4 cut(s) 140, 287, 383, 1038
BmrFI CCNGG 3 cut(s) 303, 420, 602
BmsI GCATC 2 cut(s) 51, 755
BpiI GAAGAC 1 cut(s) 532
BpmI CTGGAG 1 cut(s) 962
Bpu14I TTCGAA 1 cut(s) 128
BpuMI CCSGG 1 cut(s) 303
BsaAI YACGTR 1 cut(s) 1048
BsaHI GRCGYC 1 cut(s) 139
BsaJI CCNNGG 4 cut(s) 15, 418, 601, 724
BsaWI WCCGGW 1 cut(s) 58
BsaXI ACNNNNNCTCC 4 cut(s) 642, 672, 943, 973
Bsc4I CCNNNNNNNGG 2 cut(s) 392, 419
Bse118I RCCGGY 1 cut(s) 910
Bse1I ACTGG 1 cut(s) 397
Bse3DI GCAATG 1 cut(s) 340
BseBI CCWGG 2 cut(s) 420, 602
BseDI CCNNGG 4 cut(s) 15, 418, 601, 724
BseGI GGATG 4 cut(s) 222, 545, 586, 770
BseLI CCNNNNNNNGG 2 cut(s) 392, 419
BseMI GCAATG 1 cut(s) 340
BseMII CTCAG 1 cut(s) 200
BseNI ACTGG 1 cut(s) 397
BseSI GKGCMC 1 cut(s) 290
BseXI GCAGC 4 cut(s) 78, 211, 362, 687
BshFI GGCC 3 cut(s) 306, 910, 996
BshNI GGYRCC 2 cut(s) 138, 285
BsiHKAI GWGCWC 2 cut(s) 329, 427
BsiSI CCGG 3 cut(s) 59, 302, 911
BslFI GGGAC 1 cut(s) 563
BslI CCNNNNNNNGG 2 cut(s) 392, 419
BsmAI GTCTC 2 cut(s) 514, 752
BsmFI GGGAC 1 cut(s) 563
BsmI GAATGC 1 cut(s) 796
BsnI GGCC 3 cut(s) 306, 910, 996
Bsp119I TTCGAA 1 cut(s) 128
Bsp1286I GDGCHC 4 cut(s) 8, 290, 329, 427
Bsp143I GATC 3 cut(s) 96, 636, 880
Bsp19I CCATGG 1 cut(s) 724
BspACI CCGC 1 cut(s) 634
BspANI GGCC 3 cut(s) 306, 910, 996
BspCNI CTCAG 1 cut(s) 201
BspHI TCATGA 2 cut(s) 144, 822
BspLI GGNNCC 4 cut(s) 140, 287, 383, 1038
BspMI ACCTGC 1 cut(s) 128
BspPI GGATC 2 cut(s) 644, 888
BspQI GCTCTTC 1 cut(s) 432
BspT104I TTCGAA 1 cut(s) 128
BspT107I GGYRCC 2 cut(s) 138, 285
BspTI CTTAAG 1 cut(s) 998
BsrDI GCAATG 1 cut(s) 340
BsrFI RCCGGY 1 cut(s) 910
BsrI ACTGG 1 cut(s) 397
BssAI RCCGGY 1 cut(s) 910
BssECI CCNNGG 4 cut(s) 15, 418, 601, 724
BssMI GATC 3 cut(s) 96, 636, 880
BssNI GRCGYC 1 cut(s) 139
BssT1I CCWWGG 1 cut(s) 724
Bst2UI CCWGG 2 cut(s) 420, 602
Bst4CI ACNGT 3 cut(s) 19, 239, 324
Bst6I CTCTTC 4 cut(s) 80, 432, 999, 1056
BstACI GRCGYC 1 cut(s) 139
BstAFI CTTAAG 1 cut(s) 998
BstBAI YACGTR 1 cut(s) 1048
BstBI TTCGAA 1 cut(s) 128
BstC8I GCNNGC 2 cut(s) 137, 705
BstDEI CTNAG 3 cut(s) 209, 555, 855
BstDSI CCRYGG 2 cut(s) 15, 724
BstENI CCTNNNNNAGG 1 cut(s) 417
BstF5I GGATG 4 cut(s) 222, 545, 586, 770
BstH2I RGCGCY 1 cut(s) 142
BstHHI GCGC 1 cut(s) 141
BstKTI GATC 3 cut(s) 99, 639, 883
BstMAI GTCTC 2 cut(s) 514, 752
BstMBI GATC 3 cut(s) 96, 636, 880
BstMWI GCNNNNNNNGC 1 cut(s) 120
BstNI CCWGG 2 cut(s) 420, 602
BstSCI CCNGG 3 cut(s) 301, 418, 600
BstSLI GKGCMC 1 cut(s) 290
BstV1I GCAGC 4 cut(s) 78, 211, 362, 687
BstV2I GAAGAC 1 cut(s) 532
BstX2I RGATCY 1 cut(s) 636
BstXI CCANNNNNNTGG 1 cut(s) 728
BstYI RGATCY 1 cut(s) 636
BsuRI GGCC 3 cut(s) 306, 910, 996
BtgI CCRYGG 2 cut(s) 15, 724
BtsCI GGATG 4 cut(s) 222, 545, 586, 770
BveI ACCTGC 1 cut(s) 128
Cac8I GCNNGC 2 cut(s) 137, 705
CciI TCATGA 2 cut(s) 144, 822
CfoI GCGC 1 cut(s) 141
Cfr10I RCCGGY 1 cut(s) 910
Cfr13I GGNCC 1 cut(s) 304
Csp6I GTAC 1 cut(s) 933
CviAII CATG 6 cut(s) 145, 227, 311, 647, 725, 823
CviQI GTAC 1 cut(s) 933
DdeI CTNAG 3 cut(s) 209, 555, 855
DinI GGCGCC 1 cut(s) 140
DpnI GATC 3 cut(s) 98, 638, 882
DpnII GATC 3 cut(s) 96, 636, 880
Eam1104I CTCTTC 4 cut(s) 80, 432, 999, 1056
EarI CTCTTC 4 cut(s) 80, 432, 999, 1056
EciI GGCGGA 1 cut(s) 649
Eco130I CCWWGG 1 cut(s) 724
Eco24I GRGCYC 1 cut(s) 8
EcoNI CCTNNNNNAGG 1 cut(s) 417
EcoRII CCWGG 2 cut(s) 418, 600
EcoT14I CCWWGG 1 cut(s) 724
EcoT38I GRGCYC 1 cut(s) 8
EgeI GGCGCC 1 cut(s) 140
EheI GGCGCC 1 cut(s) 140
ErhI CCWWGG 1 cut(s) 724
FaeI CATG 6 cut(s) 148, 230, 314, 650, 728, 826
FaqI GGGAC 1 cut(s) 563
FatI CATG 6 cut(s) 144, 226, 310, 646, 724, 822
FauNDI CATATG 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 1069
Fnu4HI GCNGC 4 cut(s) 92, 200, 351, 701
FokI GGATG 4 cut(s) 209, 532, 573, 777
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 4 cut(s) 92, 200, 351, 701
FspBI CTAG 3 cut(s) 248, 357, 930
GlaI GCGC 1 cut(s) 140
GluI GCNGC 4 cut(s) 92, 200, 351, 701
GsuI CTGGAG 1 cut(s) 962
HaeII RGCGCY 1 cut(s) 142
HaeIII GGCC 3 cut(s) 306, 910, 996
HapII CCGG 3 cut(s) 59, 302, 911
HhaI GCGC 1 cut(s) 141
Hin1I GRCGYC 1 cut(s) 139
Hin1II CATG 6 cut(s) 148, 230, 314, 650, 728, 826
Hin6I GCGC 1 cut(s) 139
HinP1I GCGC 1 cut(s) 139
HinfI GANTC 7 cut(s) 211, 230, 242, 607, 845, 952, 1066
HpaII CCGG 3 cut(s) 59, 302, 911
HphI GGTGA 2 cut(s) 31, 109
Hpy166II GTNNAC 2 cut(s) 471, 1070
Hpy188I TCNGA 8 cut(s) 157, 196, 235, 275, 317, 367, 689, 880
Hpy188III TCNNGA 7 cut(s) 82, 145, 184, 379, 549, 823, 941
Hpy8I GTNNAC 2 cut(s) 471, 1070
HpyAV CCTTC 1 cut(s) 317
HpyCH4III ACNGT 3 cut(s) 19, 239, 324
HpyCH4IV ACGT 1 cut(s) 1047
HpyCH4V TGCA 7 cut(s) 42, 333, 350, 437, 662, 807, 1055
HpyF10VI GCNNNNNNNGC 1 cut(s) 120
HpyF3I CTNAG 3 cut(s) 209, 555, 855
HpySE526I ACGT 1 cut(s) 1047
Hsp92I GRCGYC 1 cut(s) 139
Hsp92II CATG 6 cut(s) 148, 230, 314, 650, 728, 826
HspAI GCGC 1 cut(s) 139
KasI GGCGCC 1 cut(s) 138
Kzo9I GATC 3 cut(s) 96, 636, 880
LguI GCTCTTC 1 cut(s) 432
LmnI GCTCC 3 cut(s) 332, 679, 1036
Lsp1109I GCAGC 4 cut(s) 78, 211, 362, 687
LweI GCATC 2 cut(s) 51, 755
MaeI CTAG 3 cut(s) 248, 357, 930
MaeII ACGT 1 cut(s) 1047
MalI GATC 3 cut(s) 98, 638, 882
MboI GATC 3 cut(s) 96, 636, 880
MflI RGATCY 1 cut(s) 636
MhlI GDGCHC 4 cut(s) 8, 290, 329, 427
MluCI AATT 7 cut(s) 108, 163, 179, 361, 407, 438, 777
Mly113I GGCGCC 1 cut(s) 139
MlyI GAGTC 4 cut(s) 220, 839, 961, 1075
MmeI TCCRAC 3 cut(s) 180, 542, 739
MnlI CCTC 7 cut(s) 81, 152, 442, 613, 755, 829, 900
MseI TTAA 4 cut(s) 77, 615, 714, 999
MslI CAYNNNNRTG 3 cut(s) 47, 726, 729
MspCI CTTAAG 1 cut(s) 998
MspI CCGG 3 cut(s) 59, 302, 911
MspR9I CCNGG 3 cut(s) 303, 420, 602
Mva1269I GAATGC 1 cut(s) 796
MvaI CCWGG 2 cut(s) 420, 602
MwoI GCNNNNNNNGC 1 cut(s) 120
NarI GGCGCC 1 cut(s) 139
NciI CCSGG 1 cut(s) 303
NcoI CCATGG 1 cut(s) 724
NdeI CATATG 1 cut(s) 1057
NdeII GATC 3 cut(s) 96, 636, 880
NlaIII CATG 6 cut(s) 148, 230, 314, 650, 728, 826
NlaIV GGNNCC 4 cut(s) 140, 287, 383, 1038
NspV TTCGAA 1 cut(s) 128
OliI CACNNNNGTG 1 cut(s) 726
PagI TCATGA 2 cut(s) 144, 822
PaqCI CACCTGC 1 cut(s) 128
PciSI GCTCTTC 1 cut(s) 432
PctI GAATGC 1 cut(s) 796
PfeI GAWTC 3 cut(s) 230, 242, 607
PflMI CCANNNNNTGG 1 cut(s) 392
PkrI GCNGC 4 cut(s) 93, 201, 352, 702
PleI GAGTC 4 cut(s) 219, 839, 960, 1074
PluTI GGCGCC 1 cut(s) 142
PpsI GAGTC 4 cut(s) 219, 839, 960, 1074
Ppu21I YACGTR 1 cut(s) 1048
Psp6I CCWGG 2 cut(s) 418, 600
PspGI CCWGG 2 cut(s) 418, 600
PspN4I GGNNCC 4 cut(s) 140, 287, 383, 1038
PspPI GGNCC 1 cut(s) 304
PsuI RGATCY 1 cut(s) 636
RsaI GTAC 1 cut(s) 934
RsaNI GTAC 1 cut(s) 933
RseI CAYNNNNRTG 3 cut(s) 47, 726, 729
SapI GCTCTTC 1 cut(s) 432
SaqAI TTAA 4 cut(s) 77, 615, 714, 999
SatI GCNGC 4 cut(s) 92, 200, 351, 701
Sau3AI GATC 3 cut(s) 96, 636, 880
Sau96I GGNCC 1 cut(s) 304
ScaI AGTACT 1 cut(s) 934
SchI GAGTC 4 cut(s) 220, 839, 961, 1075
ScrFI CCNGG 3 cut(s) 303, 420, 602
SduI GDGCHC 4 cut(s) 8, 290, 329, 427
SfaNI GCATC 2 cut(s) 51, 755
SfoI GGCGCC 1 cut(s) 140
SfuI TTCGAA 1 cut(s) 128
SmiMI CAYNNNNRTG 3 cut(s) 47, 726, 729
SmlI CTYRAG 1 cut(s) 998
SmoI CTYRAG 1 cut(s) 998
SpeI ACTAGT 1 cut(s) 929
Sse9I AATT 7 cut(s) 108, 163, 179, 361, 407, 438, 777
SsiI CCGC 1 cut(s) 634
SspDI GGCGCC 1 cut(s) 138
SspMI CTAG 3 cut(s) 248, 357, 930
StyD4I CCNGG 3 cut(s) 301, 418, 600
StyI CCWWGG 1 cut(s) 724
TaaI ACNGT 3 cut(s) 19, 239, 324
TaiI ACGT 1 cut(s) 1050
TaqI TCGA 1 cut(s) 128
TasI AATT 7 cut(s) 108, 163, 179, 361, 407, 438, 777
TatI WGTACW 1 cut(s) 932
TfiI GAWTC 3 cut(s) 230, 242, 607
Tru1I TTAA 4 cut(s) 77, 615, 714, 999
Tru9I TTAA 4 cut(s) 77, 615, 714, 999
TseI GCWGC 4 cut(s) 91, 199, 350, 700
TspDTI ATGAA 5 cut(s) 243, 299, 617, 635, 1074
TspGWI ACGGA 1 cut(s) 938
Van91I CCANNNNNTGG 1 cut(s) 392
Vha464I CTTAAG 1 cut(s) 998
XagI CCTNNNNNAGG 1 cut(s) 417
XapI RAATTY 1 cut(s) 163
XmiI GTMKAC 1 cut(s) 1069
XspI CTAG 3 cut(s) 248, 357, 930
ZrmI AGTACT 1 cut(s) 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.