RchiOBHm_Chr2g0109761

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
21095448 .. 21097050
1603 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48355

Sequence Viewer

Length: 1188 bp
ATGGCAACAATGAACGAACACCTCCCCGAAGAAATCACGACACAAATCCTTTATAGGTTACCCCTGAAACAAGTAATCCGTTTCAGCTGCACTTCAAAGAGATGGAGATCAATTGTCTCAGATCCCCAATTCGCCAAATCGCATTTCACATTCGCTTCTGAGCGGAGAACCCTCAGTCACAGACTCCTGCTCTCCACGCCCTCTCATATGGAATCCTTAGACTTGCAAACACCGTCGTTTGTGGAAGACTCTTGTATCAGAAAGCCTATCTGCCCATTCAAGCAACCAGGGCGCCCCGTCTTCACACTCGGTTCCTGCAATGGTATGGTGTTTGTATCTCTTGATTTCCATGATGGATTTTATATCTGGAACCCATCAACTGGGTTGTTCCTCAAATTGCCCAACCCGGGTTTTGCCTCGGAAGAAAATAAAACGATTTCATGTCTCCACCATTGTGGTTTTGGGTATGTTTCGGCCACTGACGATTACAAAGTTGTTGTGGCTGCTCCATCTGAGGTGAATCCAGCCATGCCTATACAAGTGTTCTCCTCTAAATCCACCTCTTGGAAAAGGTTTGAATCCCCTCCCCACTTCTCCTTGATGCGTTGGTTCGATACAATTAGGGGCAGTCTTACTAATGAGGCACTACATTGGCTCGACGAATTGCGTGAGCCGGAGCTAGACACTTCCAGATACACCATCACTGCTTTTGATTTAGACAGAGAAGAATTTCGGGAAATGCCGCTTCCTATTTCGGGTGAGACACTTTCAGATAGATCGTTTTTAAGAGGCGTAGGGGTTGTTTTTGGAGGGTGCTTGTGCGTATCTAGTTTTGATGGTGAGTATTTTCAATTATGGGTGATGATGGAATATGATGTTGGTGAATCTTGGACCAAGCTGTTTAAGTTTAAGAATGCGGGGATTCATCTTGTGCTACCTGTCTTCTACACGGAAAGAAGGGTTGTTATGTGGGGATGCAGATTTTGGGATGGGGAGGTGGACGACCTCTTGATAAGGTTTGATCATAACGAAGAAGAGAAGCTTGACAGGGTTGCGGTTTGTAGTGCGACATATTGGCTTGGTCGAAACGGGTATGGTCCATATAGGTTTGAGCCAGGTCACTGTCATATGATCCAATATGATGAAAGTCTACTTTGGCTTCATGATTCTAGGGCTGAGGGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

395

Amino Acids

45.68

Weight (kDa)

5.8

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 6 - 46 3.1e-09 F-box-like
F-box PF00646 7 - 44 8.7e-11 F-box domain
FBA_3 PF08268 98 - 299 1.3e-10 F-box associated beta propeller domain
FBA_1 PF07734 100 - 343 8.1e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 291
AccB7I CCANNNNNTGG 2 cut(s) 380, 564
AccBSI CCGCTC 1 cut(s) 163
AccI GTMKAC 1 cut(s) 1150
AciI CCGC 4 cut(s) 163, 743, 917, 1055
AclWI GGATC 2 cut(s) 116, 1126
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 1 cut(s) 728
AcyI GRCGYC 1 cut(s) 292
AfiI CCNNNNNNNGG 4 cut(s) 380, 407, 564, 755
AgsI TTSAA 4 cut(s) 96, 280, 578, 851
AjnI CCWGG 2 cut(s) 286, 1114
AjuI GAANNNNNNNTTGG 4 cut(s) 128, 160, 861, 893
AleI CACNNNNGTG 1 cut(s) 453
AluBI AGCT 4 cut(s) 87, 679, 898, 1042
AluI AGCT 4 cut(s) 87, 679, 898, 1042
Alw26I GTCTC 3 cut(s) 121, 449, 755
AlwI GGATC 2 cut(s) 116, 1126
Ama87I CYCGRG 1 cut(s) 406
AoxI GGCC 1 cut(s) 474
ApeKI GCWGC 2 cut(s) 87, 503
ApoI RAATTY 1 cut(s) 728
Asp700I GAANNNNTTC 1 cut(s) 729
AspLEI GCGC 1 cut(s) 294
AspS9I GGNCC 2 cut(s) 891, 1097
AsuC2I CCSGG 2 cut(s) 407, 408
AsuHPI GGTGA 5 cut(s) 529, 770, 851, 871, 893
AvaI CYCGRG 1 cut(s) 406
AvaII GGWCC 2 cut(s) 891, 1097
BaeI ACNNNNGTAYC 2 cut(s) 238, 271
BanI GGYRCC 1 cut(s) 291
BbsI GAAGAC 3 cut(s) 252, 292, 934
BbvCI CCTCAGC 1 cut(s) 1176
BbvI GCAGC 2 cut(s) 74, 490
BccI CCATC 8 cut(s) 96, 347, 382, 517, 707, 830, 859, 983
BciT130I CCWGG 2 cut(s) 288, 1116
BclI TGATCA 1 cut(s) 1021
BcnI CCSGG 2 cut(s) 407, 408
BcoDI GTCTC 3 cut(s) 121, 449, 755
BfaI CTAG 3 cut(s) 680, 828, 1170
BfoI RGCGCY 1 cut(s) 295
BisI GCNGC 3 cut(s) 88, 504, 743
BlsI GCNGC 3 cut(s) 89, 505, 744
Bme1390I CCNGG 4 cut(s) 288, 407, 408, 1116
Bme18I GGWCC 2 cut(s) 891, 1097
BmeT110I CYCGRG 1 cut(s) 406
BmgT120I GGNCC 2 cut(s) 891, 1097
BmiI GGNNCC 3 cut(s) 293, 313, 371
BmrFI CCNGG 4 cut(s) 288, 407, 408, 1116
BmrI ACTGGG 1 cut(s) 390
BmsI GCATC 2 cut(s) 591, 965
BmuI ACTGGG 1 cut(s) 390
BpiI GAAGAC 3 cut(s) 252, 292, 934
Bpu10I CCTNAGC 1 cut(s) 1176
BpuMI CCSGG 2 cut(s) 407, 408
BsaBI GATNNNNATC 1 cut(s) 106
BsaHI GRCGYC 1 cut(s) 292
BsaJI CCNNGG 3 cut(s) 287, 406, 417
Bsc4I CCNNNNNNNGG 4 cut(s) 380, 407, 564, 755
Bse1I ACTGG 1 cut(s) 385
Bse3DI GCAATG 1 cut(s) 325
Bse8I GATNNNNATC 1 cut(s) 106
BseBI CCWGG 2 cut(s) 288, 1116
BseDI CCNNGG 3 cut(s) 287, 406, 417
BseGI GGATG 2 cut(s) 980, 994
BseJI GATNNNNATC 1 cut(s) 106
BseLI CCNNNNNNNGG 4 cut(s) 380, 407, 564, 755
BseMI GCAATG 1 cut(s) 325
BseMII CTCAG 5 cut(s) 132, 150, 187, 504, 1167
BseNI ACTGG 1 cut(s) 385
BseRI GAGGAG 1 cut(s) 538
BseXI GCAGC 2 cut(s) 74, 490
BsgI GTGCAG 1 cut(s) 73
BshFI GGCC 1 cut(s) 476
BshNI GGYRCC 1 cut(s) 291
BsiHKCI CYCGRG 1 cut(s) 406
BsiSI CCGG 2 cut(s) 407, 674
BslI CCNNNNNNNGG 4 cut(s) 380, 407, 564, 755
BsmAI GTCTC 3 cut(s) 121, 449, 755
BsmI GAATGC 1 cut(s) 919
BsnI GGCC 1 cut(s) 476
BsoBI CYCGRG 1 cut(s) 406
Bsp143I GATC 5 cut(s) 107, 121, 776, 1021, 1131
BspACI CCGC 4 cut(s) 163, 743, 917, 1055
BspANI GGCC 1 cut(s) 476
BspCNI CTCAG 5 cut(s) 131, 151, 186, 505, 1168
BspHI TCATGA 1 cut(s) 1162
BspLI GGNNCC 3 cut(s) 293, 313, 371
BspPI GGATC 2 cut(s) 116, 1126
BspT107I GGYRCC 1 cut(s) 291
BsrBI CCGCTC 1 cut(s) 163
BsrDI GCAATG 1 cut(s) 325
BsrI ACTGG 1 cut(s) 385
BssECI CCNNGG 3 cut(s) 287, 406, 417
BssMI GATC 5 cut(s) 107, 121, 776, 1021, 1131
BssNI GRCGYC 1 cut(s) 292
Bst2UI CCWGG 2 cut(s) 288, 1116
Bst4CI ACNGT 2 cut(s) 234, 1124
Bst6I CTCTTC 1 cut(s) 1029
BstACI GRCGYC 1 cut(s) 292
BstDEI CTNAG 6 cut(s) 118, 159, 173, 217, 513, 1176
BstEII GGTNACC 1 cut(s) 57
BstF5I GGATG 2 cut(s) 980, 994
BstH2I RGCGCY 1 cut(s) 295
BstHHI GCGC 1 cut(s) 294
BstKTI GATC 5 cut(s) 110, 124, 779, 1024, 1134
BstMAI GTCTC 3 cut(s) 121, 449, 755
BstMBI GATC 5 cut(s) 107, 121, 776, 1021, 1131
BstMWI GCNNNNNNNGC 2 cut(s) 196, 289
BstNI CCWGG 2 cut(s) 288, 1116
BstPI GGTNACC 1 cut(s) 57
BstSCI CCNGG 4 cut(s) 286, 405, 406, 1114
BstV1I GCAGC 2 cut(s) 74, 490
BstV2I GAAGAC 3 cut(s) 252, 292, 934
BstX2I RGATCY 1 cut(s) 121
BstXI CCANNNNNNTGG 1 cut(s) 455
BstYI RGATCY 1 cut(s) 121
BsuRI GGCC 1 cut(s) 476
BtsCI GGATG 2 cut(s) 980, 994
BtsI GCAGTG 1 cut(s) 702
BtsIMutI CAGTG 3 cut(s) 477, 702, 1120
CciI TCATGA 1 cut(s) 1162
CfoI GCGC 1 cut(s) 294
Cfr13I GGNCC 2 cut(s) 891, 1097
Cfr9I CCCGGG 1 cut(s) 406
CviAII CATG 4 cut(s) 350, 441, 529, 1163
DdeI CTNAG 6 cut(s) 118, 159, 173, 217, 513, 1176
DinI GGCGCC 1 cut(s) 293
DpnI GATC 5 cut(s) 109, 123, 778, 1023, 1133
DpnII GATC 5 cut(s) 107, 121, 776, 1021, 1131
EaeI YGGCCR 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 1029
EarI CTCTTC 1 cut(s) 1029
Eco47I GGWCC 2 cut(s) 891, 1097
Eco88I CYCGRG 1 cut(s) 406
Eco91I GGTNACC 1 cut(s) 57
EcoO65I GGTNACC 1 cut(s) 57
EcoRII CCWGG 2 cut(s) 286, 1114
EgeI GGCGCC 1 cut(s) 293
EheI GGCGCC 1 cut(s) 293
FaeI CATG 4 cut(s) 353, 444, 532, 1166
FalI AAGNNNNNCTT 2 cut(s) 1026, 1058
FatI CATG 4 cut(s) 349, 440, 528, 1162
FauI CCCGC 1 cut(s) 910
FauNDI CATATG 2 cut(s) 207, 1128
FbaI TGATCA 1 cut(s) 1021
FblI GTMKAC 1 cut(s) 1150
Fnu4HI GCNGC 3 cut(s) 88, 504, 743
FokI GGATG 2 cut(s) 987, 1001
Fsp4HI GCNGC 3 cut(s) 88, 504, 743
FspBI CTAG 3 cut(s) 680, 828, 1170
GlaI GCGC 1 cut(s) 293
GluI GCNGC 3 cut(s) 88, 504, 743
HaeII RGCGCY 1 cut(s) 295
HaeIII GGCC 1 cut(s) 476
HapII CCGG 2 cut(s) 407, 674
HhaI GCGC 1 cut(s) 294
Hin1I GRCGYC 1 cut(s) 292
Hin1II CATG 4 cut(s) 353, 444, 532, 1166
Hin6I GCGC 1 cut(s) 292
HinP1I GCGC 1 cut(s) 292
HindIII AAGCTT 1 cut(s) 1040
HinfI GANTC 8 cut(s) 183, 212, 248, 520, 578, 884, 922, 1166
HpaII CCGG 2 cut(s) 407, 674
HphI GGTGA 5 cut(s) 529, 770, 851, 871, 893
Hpy166II GTNNAC 2 cut(s) 1000, 1151
Hpy188I TCNGA 6 cut(s) 121, 160, 260, 421, 514, 772
Hpy188III TCNNGA 7 cut(s) 37, 341, 367, 690, 734, 1009, 1163
Hpy8I GTNNAC 2 cut(s) 1000, 1151
Hpy99I CGWCG 2 cut(s) 238, 662
HpyAV CCTTC 1 cut(s) 951
HpyCH4III ACNGT 2 cut(s) 234, 1124
HpyCH4V TGCA 4 cut(s) 90, 226, 318, 978
HpyF10VI GCNNNNNNNGC 2 cut(s) 196, 289
HpyF3I CTNAG 6 cut(s) 118, 159, 173, 217, 513, 1176
Hsp92I GRCGYC 1 cut(s) 292
Hsp92II CATG 4 cut(s) 353, 444, 532, 1166
HspAI GCGC 1 cut(s) 292
KasI GGCGCC 1 cut(s) 291
Ksp22I TGATCA 1 cut(s) 1021
Kzo9I GATC 5 cut(s) 107, 121, 776, 1021, 1131
LmnI GCTCC 2 cut(s) 511, 676
Lsp1109I GCAGC 2 cut(s) 74, 490
LweI GCATC 2 cut(s) 591, 965
MaeI CTAG 3 cut(s) 680, 828, 1170
MaeIII GTNAC 3 cut(s) 57, 176, 1118
MalI GATC 5 cut(s) 109, 123, 778, 1023, 1133
MbiI CCGCTC 1 cut(s) 163
MboI GATC 5 cut(s) 107, 121, 776, 1021, 1131
MboII GAAGA 8 cut(s) 41, 257, 292, 434, 737, 934, 1043, 1046
MfeI CAATTG 1 cut(s) 111
MflI RGATCY 1 cut(s) 121
MluCI AATT 7 cut(s) 111, 128, 395, 618, 662, 728, 851
Mly113I GGCGCC 1 cut(s) 292
MlyI GAGTC 2 cut(s) 177, 242
MroXI GAANNNNTTC 1 cut(s) 729
MseI TTAA 3 cut(s) 785, 903, 909
MslI CAYNNNNRTG 1 cut(s) 453
MspA1I CMGCKG 1 cut(s) 87
MspI CCGG 2 cut(s) 407, 674
MspR9I CCNGG 4 cut(s) 288, 407, 408, 1116
MunI CAATTG 1 cut(s) 111
Mva1269I GAATGC 1 cut(s) 919
MvaI CCWGG 2 cut(s) 288, 1116
MwoI GCNNNNNNNGC 2 cut(s) 196, 289
NarI GGCGCC 1 cut(s) 292
NciI CCSGG 2 cut(s) 407, 408
NdeI CATATG 2 cut(s) 207, 1128
NdeII GATC 5 cut(s) 107, 121, 776, 1021, 1131
NlaIII CATG 4 cut(s) 353, 444, 532, 1166
NlaIV GGNNCC 3 cut(s) 293, 313, 371
NmuCI GTSAC 2 cut(s) 176, 1118
OliI CACNNNNGTG 1 cut(s) 453
PagI TCATGA 1 cut(s) 1162
PctI GAATGC 1 cut(s) 919
PdmI GAANNNNTTC 1 cut(s) 729
PfeI GAWTC 6 cut(s) 212, 520, 578, 884, 922, 1166
PflMI CCANNNNNTGG 2 cut(s) 380, 564
PkrI GCNGC 3 cut(s) 89, 505, 744
PleI GAGTC 2 cut(s) 177, 242
PluTI GGCGCC 1 cut(s) 295
PpsI GAGTC 2 cut(s) 177, 242
Psp6I CCWGG 2 cut(s) 286, 1114
PspEI GGTNACC 1 cut(s) 57
PspGI CCWGG 2 cut(s) 286, 1114
PspN4I GGNNCC 3 cut(s) 293, 313, 371
PspPI GGNCC 2 cut(s) 891, 1097
PsuI RGATCY 1 cut(s) 121
PvuII CAGCTG 1 cut(s) 87
RseI CAYNNNNRTG 1 cut(s) 453
SaqAI TTAA 3 cut(s) 785, 903, 909
SatI GCNGC 3 cut(s) 88, 504, 743
Sau3AI GATC 5 cut(s) 107, 121, 776, 1021, 1131
Sau96I GGNCC 2 cut(s) 891, 1097
SchI GAGTC 2 cut(s) 177, 242
ScrFI CCNGG 4 cut(s) 288, 407, 408, 1116
SfaNI GCATC 2 cut(s) 591, 965
SfoI GGCGCC 1 cut(s) 293
SinI GGWCC 2 cut(s) 891, 1097
SmaI CCCGGG 1 cut(s) 408
SmiMI CAYNNNNRTG 1 cut(s) 453
Sse9I AATT 7 cut(s) 111, 128, 395, 618, 662, 728, 851
SsiI CCGC 4 cut(s) 163, 743, 917, 1055
SspDI GGCGCC 1 cut(s) 291
SspMI CTAG 3 cut(s) 680, 828, 1170
StyD4I CCNGG 4 cut(s) 286, 405, 406, 1114
TaaI ACNGT 2 cut(s) 234, 1124
TaqI TCGA 3 cut(s) 612, 657, 1084
TasI AATT 7 cut(s) 111, 128, 395, 618, 662, 728, 851
TauI GCSGC 1 cut(s) 745
TfiI GAWTC 6 cut(s) 212, 520, 578, 884, 922, 1166
Tru1I TTAA 3 cut(s) 785, 903, 909
Tru9I TTAA 3 cut(s) 785, 903, 909
TscAI CASTG 3 cut(s) 484, 709, 1127
TseFI GTSAC 2 cut(s) 176, 1118
TseI GCWGC 2 cut(s) 87, 503
Tsp45I GTSAC 2 cut(s) 176, 1118
TspDTI ATGAA 5 cut(s) 26, 429, 914, 1151, 1158
TspGWI ACGGA 2 cut(s) 68, 965
TspMI CCCGGG 1 cut(s) 406
TspRI CASTG 3 cut(s) 484, 709, 1127
Van91I CCANNNNNTGG 2 cut(s) 380, 564
VpaK11BI GGWCC 2 cut(s) 891, 1097
XapI RAATTY 1 cut(s) 728
XcmI CCANNNNNNNNNTGG 1 cut(s) 458
XmaI CCCGGG 1 cut(s) 406
XmiI GTMKAC 1 cut(s) 1150
XmnI GAANNNNTTC 1 cut(s) 729
XspI CTAG 3 cut(s) 680, 828, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.