Rroxscaffold_1G00021240

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000082
Physical Location & Seq
Reverse (-)
26070988 .. 26076009
5022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00021240.1

Sequence Viewer

Length: 1167 bp
ATGTCAGTAGTAGCCTTGAAGAGCGACGAAGCCAATTTTCAAATGGCGGAGGAGTGCTTACCCGAACATGTGATACTCAGAATCCTGGAGAGGTTGCCTATCAAATCCCTAATCCGCTTCACCTCCGTTTCAAAACGCTGGCGTTTCATCATCTCCTCCGACCCCAATTTCGCCAAATCCCACTTCCACATAGCTTCTCACCACCAAACCCTCACTCGCAGACTCCTCCTCTCCGACGGCCGTGGCTCTGAATTCGAATCCCGAGACCTGGAGACGCCCTCGTCGTTCCGAGACAAGTCCTCCATCAGAAACCTCAGCTACCGTGATAGGGTTATCATTGCTTTTGATTTGGCCAAAGAGGAGCTCCGAACAATGCCGCTGCCTGAACATGATAATGTAGAGTACTTCGGATATCTAGGGGCATTTGGAAGCTGCCTGTGTGTATATGATGAGGCCTATATTAAGTCGGGCTCTGTTGATTTGTGGGTCATGAGAGATTATGGTGTTGCTGACTCCTGGACTAAGATGTTTCGCTTGAAGGTTTCCGATCGGCCTGAGGATATTAATTATTTGAAGCCAATCTTGGTTACGGAAACTGGTACATTTCTGCTAAAAGGGACTTTTGATAGTGGTAGGAAGTTGGAGTGCAAGTTGATAAGGAGTGGTCATGAGAATGAGCAGCTTGAAACATATATGCTTAGCAAGCAAATTGACAACATGCTGGCATATGAAGAGAGTCTACTTCAGCCTGGTAACTACAACAAAAGGACTTGCCCAATTGAACTAGCCAAGAAAGCTAGAAATGCTTCAGAAGCTAGAGGCAGCAGCTCTATTGATGTCCAAGTGAAAACCAATGAAACTAGAGCAAAGGAGCAGGTCAAGAGAGCACCAAACAGATCAGGAAAGGATGGAGTGCTATCTGCTGTAGCTCAAACATCACTAACAGTTCAAGCAACCTTAAAGCCTGTTCAGTCATCATCCCAAACATCCCCTGAATCTTCGTCACAGCCAACTCAATCATCAAGGAACACTATGTATCCGAGCTCTCGTGTTGACCCAGTCACTGTGGCAAGAAAGTGTAACAAGACACTAGAGAAGCCAAATGGACCAAAACAACTAAGCAGGCCAATTTCTGATCTCAAGCAGCAGCCCAACAGAGACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

388

Amino Acids

43.93

Weight (kDa)

9.13

Isoelectric Point (pI)

56.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 57 1.2e-10 F-box domain
F-box-like PF12937 19 - 54 6.1e-08 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 280
Acc36I ACCTGC 1 cut(s) 865
AccI GTMKAC 1 cut(s) 739
AciI CCGC 3 cut(s) 47, 115, 377
AcoI YGGCCR 2 cut(s) 238, 351
AcsI RAATTY 1 cut(s) 251
AcuI CTGAAG 2 cut(s) 728, 792
AcyI GRCGYC 1 cut(s) 275
AfaI GTAC 2 cut(s) 404, 601
AfiI CCNNNNNNNGG 2 cut(s) 268, 328
AflIII ACRYGT 1 cut(s) 67
AgsI TTSAA 8 cut(s) 19, 41, 132, 538, 574, 686, 782, 950
AjnI CCWGG 4 cut(s) 84, 267, 515, 748
AjuI GAANNNNNNNTTGG 4 cut(s) 167, 199, 566, 598
Alw21I GWGCWC 3 cut(s) 366, 889, 1046
Alw26I GTCTC 4 cut(s) 258, 266, 285, 1152
AlwNI CAGNNNCTG 1 cut(s) 1064
Ama87I CYCGRG 1 cut(s) 261
AoxI GGCC 5 cut(s) 238, 351, 453, 551, 1124
ApeKI GCWGC 7 cut(s) 379, 432, 679, 822, 825, 1144, 1147
ApoI RAATTY 1 cut(s) 251
ArsI GACNNNNNNTTYG 2 cut(s) 152, 184
AseI ATTAAT 1 cut(s) 564
Asp700I GAANNNNTTC 1 cut(s) 805
AspS9I GGNCC 1 cut(s) 1106
AsuHPI GGTGA 2 cut(s) 112, 191
AsuII TTCGAA 1 cut(s) 255
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 1 cut(s) 1106
AxyI CCTNAGG 1 cut(s) 555
BalI TGGCCA 1 cut(s) 353
BanII GRGCYC 3 cut(s) 366, 473, 1046
BarI GAAGNNNNNNTAC 2 cut(s) 723, 755
BauI CACGAG 1 cut(s) 1047
Bbv12I GWGCWC 3 cut(s) 366, 889, 1046
BbvCI CCTCAGC 1 cut(s) 314
BbvI GCAGC 7 cut(s) 366, 419, 691, 834, 837, 1156, 1159
BccI CCATC 2 cut(s) 311, 902
BceAI ACGGC 2 cut(s) 225, 253
BciT130I CCWGG 4 cut(s) 86, 269, 517, 750
BciVI GTATCC 1 cut(s) 1047
BcoDI GTCTC 4 cut(s) 258, 266, 285, 1152
BfaI CTAG 6 cut(s) 416, 785, 798, 816, 861, 1091
BfmI CTRYAG 1 cut(s) 924
BfuAI ACCTGC 1 cut(s) 865
BfuI GTATCC 1 cut(s) 1047
BisI GCNGC 8 cut(s) 377, 380, 433, 680, 823, 826, 1145, 1148
BlpI GCTNAGC 1 cut(s) 698
BlsI GCNGC 8 cut(s) 378, 381, 434, 681, 824, 827, 1146, 1149
BmcAI AGTACT 1 cut(s) 404
Bme1390I CCNGG 4 cut(s) 86, 269, 517, 750
Bme18I GGWCC 1 cut(s) 1106
BmeT110I CYCGRG 1 cut(s) 261
BmgT120I GGNCC 1 cut(s) 1106
BmrFI CCNGG 4 cut(s) 86, 269, 517, 750
BmrI ACTGGG 1 cut(s) 1052
BmuI ACTGGG 1 cut(s) 1052
BplI GAGNNNNNCTC 2 cut(s) 263, 295
BpmI CTGGAG 2 cut(s) 107, 290
Bpu10I CCTNAGC 1 cut(s) 314
Bpu1102I GCTNAGC 1 cut(s) 698
Bpu14I TTCGAA 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 1124
BsaHI GRCGYC 1 cut(s) 275
BsaI GGTCTC 1 cut(s) 258
BsaJI CCNNGG 1 cut(s) 241
BsaXI ACNNNNNCTCC 4 cut(s) 284, 314, 635, 665
Bsc4I CCNNNNNNNGG 2 cut(s) 268, 328
Bse1I ACTGG 2 cut(s) 601, 1058
Bse21I CCTNAGG 1 cut(s) 555
Bse3DI GCAATG 1 cut(s) 336
BseBI CCWGG 4 cut(s) 86, 269, 517, 750
BseDI CCNNGG 1 cut(s) 241
BseGI GGATG 3 cut(s) 913, 977, 986
BseLI CCNNNNNNNGG 2 cut(s) 268, 328
BseMI GCAATG 1 cut(s) 336
BseMII CTCAG 3 cut(s) 91, 328, 546
BseNI ACTGG 2 cut(s) 601, 1058
BseRI GAGGAG 5 cut(s) 65, 145, 215, 218, 374
BseX3I CGGCCG 1 cut(s) 238
BseXI GCAGC 7 cut(s) 366, 419, 691, 834, 837, 1156, 1159
Bsh1285I CGRYCG 2 cut(s) 241, 550
BshFI GGCC 5 cut(s) 240, 353, 455, 553, 1126
BsiEI CGRYCG 2 cut(s) 241, 550
BsiHKAI GWGCWC 3 cut(s) 366, 889, 1046
BsiHKCI CYCGRG 1 cut(s) 261
BslFI GGGAC 1 cut(s) 631
BslI CCNNNNNNNGG 2 cut(s) 268, 328
BsmAI GTCTC 4 cut(s) 258, 266, 285, 1152
BsmBI CGTCTC 1 cut(s) 266
BsmFI GGGAC 1 cut(s) 631
BsnI GGCC 5 cut(s) 240, 353, 455, 553, 1126
Bso31I GGTCTC 1 cut(s) 258
BsoBI CYCGRG 1 cut(s) 261
Bsp119I TTCGAA 1 cut(s) 255
Bsp1286I GDGCHC 4 cut(s) 366, 473, 889, 1046
Bsp143I GATC 3 cut(s) 547, 896, 1135
Bsp1720I GCTNAGC 1 cut(s) 698
BspACI CCGC 3 cut(s) 47, 115, 377
BspANI GGCC 5 cut(s) 240, 353, 455, 553, 1126
BspCNI CTCAG 3 cut(s) 90, 327, 547
BspHI TCATGA 2 cut(s) 489, 667
BspMI ACCTGC 1 cut(s) 865
BspQI GCTCTTC 1 cut(s) 14
BspT104I TTCGAA 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 258
BsrDI GCAATG 1 cut(s) 336
BsrI ACTGG 2 cut(s) 601, 1058
BssECI CCNNGG 1 cut(s) 241
BssMI GATC 3 cut(s) 547, 896, 1135
BssNI GRCGYC 1 cut(s) 275
BssSI CACGAG 1 cut(s) 1047
Bst2BI CACGAG 1 cut(s) 1047
Bst2UI CCWGG 4 cut(s) 86, 269, 517, 750
Bst4CI ACNGT 3 cut(s) 323, 946, 1066
Bst6I CTCTTC 2 cut(s) 14, 726
BstACI GRCGYC 1 cut(s) 275
BstBI TTCGAA 1 cut(s) 255
BstC8I GCNNGC 4 cut(s) 140, 704, 723, 1124
BstDEI CTNAG 6 cut(s) 77, 314, 522, 555, 698, 1118
BstDSI CCRYGG 1 cut(s) 241
BstF5I GGATG 3 cut(s) 913, 977, 986
BstKTI GATC 3 cut(s) 550, 899, 1138
BstMAI GTCTC 4 cut(s) 258, 266, 285, 1152
BstMBI GATC 3 cut(s) 547, 896, 1135
BstMCI CGRYCG 2 cut(s) 241, 550
BstMWI GCNNNNNNNGC 4 cut(s) 703, 794, 803, 812
BstNI CCWGG 4 cut(s) 86, 269, 517, 750
BstNSI RCATGY 2 cut(s) 71, 721
BstSCI CCNGG 4 cut(s) 84, 267, 515, 748
BstSFI CTRYAG 1 cut(s) 924
BstV1I GCAGC 7 cut(s) 366, 419, 691, 834, 837, 1156, 1159
BstZI CGGCCG 1 cut(s) 238
Bsu36I CCTNAGG 1 cut(s) 555
BsuI GTATCC 1 cut(s) 1047
BsuRI GGCC 5 cut(s) 240, 353, 455, 553, 1126
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 3 cut(s) 913, 977, 986
BtsIMutI CAGTG 1 cut(s) 1062
BveI ACCTGC 1 cut(s) 865
Cac8I GCNNGC 4 cut(s) 140, 704, 723, 1124
CaiI CAGNNNCTG 1 cut(s) 1064
CciI TCATGA 2 cut(s) 489, 667
Cfr13I GGNCC 1 cut(s) 1106
CseI GACGC 1 cut(s) 283
Csp6I GTAC 2 cut(s) 403, 600
CviAII CATG 5 cut(s) 68, 389, 490, 668, 718
CviQI GTAC 2 cut(s) 403, 600
DdeI CTNAG 6 cut(s) 77, 314, 522, 555, 698, 1118
DpnI GATC 3 cut(s) 549, 898, 1137
DpnII GATC 3 cut(s) 547, 896, 1135
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 2 cut(s) 238, 351
EagI CGGCCG 1 cut(s) 238
Eam1104I CTCTTC 2 cut(s) 14, 726
EarI CTCTTC 2 cut(s) 14, 726
EciI GGCGGA 1 cut(s) 62
Ecl136II GAGCTC 2 cut(s) 364, 1044
EclXI CGGCCG 1 cut(s) 238
Eco147I AGGCCT 1 cut(s) 455
Eco24I GRGCYC 3 cut(s) 366, 473, 1046
Eco31I GGTCTC 1 cut(s) 258
Eco32I GATATC 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 1106
Eco52I CGGCCG 1 cut(s) 238
Eco53kI GAGCTC 2 cut(s) 364, 1044
Eco57I CTGAAG 2 cut(s) 728, 792
Eco81I CCTNAGG 1 cut(s) 555
Eco88I CYCGRG 1 cut(s) 261
EcoICRI GAGCTC 2 cut(s) 364, 1044
EcoRI GAATTC 1 cut(s) 251
EcoRII CCWGG 4 cut(s) 84, 267, 515, 748
EcoRV GATATC 1 cut(s) 413
EcoT38I GRGCYC 3 cut(s) 366, 473, 1046
Esp3I CGTCTC 1 cut(s) 266
FaeI CATG 5 cut(s) 71, 392, 493, 671, 721
FalI AAGNNNNNCTT 2 cut(s) 566, 598
FaqI GGGAC 1 cut(s) 631
FatI CATG 5 cut(s) 67, 388, 489, 667, 717
FauNDI CATATG 1 cut(s) 727
FblI GTMKAC 1 cut(s) 739
Fnu4HI GCNGC 8 cut(s) 377, 380, 433, 680, 823, 826, 1145, 1148
FokI GGATG 3 cut(s) 920, 964, 973
FriOI GRGCYC 3 cut(s) 366, 473, 1046
Fsp4HI GCNGC 8 cut(s) 377, 380, 433, 680, 823, 826, 1145, 1148
FspBI CTAG 6 cut(s) 416, 785, 798, 816, 861, 1091
GluI GCNGC 8 cut(s) 377, 380, 433, 680, 823, 826, 1145, 1148
GsuI CTGGAG 2 cut(s) 107, 290
HaeIII GGCC 5 cut(s) 240, 353, 455, 553, 1126
HgaI GACGC 1 cut(s) 283
Hin1I GRCGYC 1 cut(s) 275
Hin1II CATG 5 cut(s) 71, 392, 493, 671, 721
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HinfI GANTC 6 cut(s) 81, 222, 257, 512, 736, 995
HphI GGTGA 2 cut(s) 112, 191
Hpy166II GTNNAC 2 cut(s) 740, 1054
Hpy188III TCNNGA 5 cut(s) 261, 490, 668, 880, 900
Hpy8I GTNNAC 2 cut(s) 740, 1054
Hpy99I CGWCG 3 cut(s) 29, 239, 286
HpyAV CCTTC 1 cut(s) 532
HpyCH4III ACNGT 3 cut(s) 323, 946, 1066
HpyCH4V TGCA 1 cut(s) 648
HpyF10VI GCNNNNNNNGC 4 cut(s) 703, 794, 803, 812
HpyF3I CTNAG 6 cut(s) 77, 314, 522, 555, 698, 1118
Hsp92I GRCGYC 1 cut(s) 275
Hsp92II CATG 5 cut(s) 71, 392, 493, 671, 721
Kzo9I GATC 3 cut(s) 547, 896, 1135
LguI GCTCTTC 1 cut(s) 14
LmnI GCTCC 3 cut(s) 361, 369, 871
Lsp1109I GCAGC 7 cut(s) 366, 419, 691, 834, 837, 1156, 1159
MaeI CTAG 6 cut(s) 416, 785, 798, 816, 861, 1091
MaeIII GTNAC 5 cut(s) 586, 752, 1002, 1060, 1079
MalI GATC 3 cut(s) 549, 898, 1137
MboI GATC 3 cut(s) 547, 896, 1135
MboII GAAGA 3 cut(s) 31, 743, 990
MfeI CAATTG 1 cut(s) 777
MhlI GDGCHC 4 cut(s) 366, 473, 889, 1046
MlsI TGGCCA 1 cut(s) 353
MluCI AATT 7 cut(s) 34, 166, 251, 565, 708, 777, 1128
MluNI TGGCCA 1 cut(s) 353
MlyI GAGTC 3 cut(s) 216, 506, 745
MmeI TCCRAC 3 cut(s) 183, 258, 621
Mox20I TGGCCA 1 cut(s) 353
MroXI GAANNNNTTC 1 cut(s) 805
MscI TGGCCA 1 cut(s) 353
MseI TTAA 3 cut(s) 462, 564, 959
MslI CAYNNNNRTG 2 cut(s) 393, 672
Msp20I TGGCCA 1 cut(s) 353
MspA1I CMGCKG 1 cut(s) 379
MspR9I CCNGG 4 cut(s) 86, 269, 517, 750
MunI CAATTG 1 cut(s) 777
MvaI CCWGG 4 cut(s) 86, 269, 517, 750
MwoI GCNNNNNNNGC 4 cut(s) 703, 794, 803, 812
NdeI CATATG 1 cut(s) 727
NdeII GATC 3 cut(s) 547, 896, 1135
NlaIII CATG 5 cut(s) 71, 392, 493, 671, 721
NmuCI GTSAC 2 cut(s) 1002, 1060
NspI RCATGY 2 cut(s) 71, 721
NspV TTCGAA 1 cut(s) 255
PagI TCATGA 2 cut(s) 489, 667
PceI AGGCCT 1 cut(s) 455
PciI ACATGT 1 cut(s) 67
PciSI GCTCTTC 1 cut(s) 14
PcsI WCGNNNNNNNCGW 1 cut(s) 281
PdmI GAANNNNTTC 1 cut(s) 805
PfeI GAWTC 3 cut(s) 81, 257, 995
PflFI GACNNNGTC 1 cut(s) 1058
PfoI TCCNGGA 2 cut(s) 84, 515
PkrI GCNGC 8 cut(s) 378, 381, 434, 681, 824, 827, 1146, 1149
Ple19I CGATCG 1 cut(s) 550
PleI GAGTC 3 cut(s) 216, 506, 744
PpsI GAGTC 3 cut(s) 216, 506, 744
PscI ACATGT 1 cut(s) 67
PshBI ATTAAT 1 cut(s) 564
Psp124BI GAGCTC 2 cut(s) 366, 1046
Psp6I CCWGG 4 cut(s) 84, 267, 515, 748
PspGI CCWGG 4 cut(s) 84, 267, 515, 748
PspPI GGNCC 1 cut(s) 1106
PsrI GAACNNNNNNTAC 2 cut(s) 57, 89
PstNI CAGNNNCTG 1 cut(s) 1064
PsyI GACNNNGTC 1 cut(s) 1058
PvuI CGATCG 1 cut(s) 550
RsaI GTAC 2 cut(s) 404, 601
RsaNI GTAC 2 cut(s) 403, 600
RseI CAYNNNNRTG 2 cut(s) 393, 672
SacI GAGCTC 2 cut(s) 366, 1046
SapI GCTCTTC 1 cut(s) 14
SaqAI TTAA 3 cut(s) 462, 564, 959
SatI GCNGC 8 cut(s) 377, 380, 433, 680, 823, 826, 1145, 1148
Sau3AI GATC 3 cut(s) 547, 896, 1135
Sau96I GGNCC 1 cut(s) 1106
ScaI AGTACT 1 cut(s) 404
SchI GAGTC 3 cut(s) 216, 506, 745
ScrFI CCNGG 4 cut(s) 86, 269, 517, 750
SduI GDGCHC 4 cut(s) 366, 473, 889, 1046
SfcI CTRYAG 1 cut(s) 924
SfuI TTCGAA 1 cut(s) 255
SinI GGWCC 1 cut(s) 1106
SmiMI CAYNNNNRTG 2 cut(s) 393, 672
SmlI CTYRAG 1 cut(s) 1139
SmoI CTYRAG 1 cut(s) 1139
Sse9I AATT 7 cut(s) 34, 166, 251, 565, 708, 777, 1128
SseBI AGGCCT 1 cut(s) 455
SsiI CCGC 3 cut(s) 47, 115, 377
SspMI CTAG 6 cut(s) 416, 785, 798, 816, 861, 1091
SstI GAGCTC 2 cut(s) 366, 1046
StuI AGGCCT 1 cut(s) 455
StyD4I CCNGG 4 cut(s) 84, 267, 515, 748
TaaI ACNGT 3 cut(s) 323, 946, 1066
TaqI TCGA 1 cut(s) 255
TasI AATT 7 cut(s) 34, 166, 251, 565, 708, 777, 1128
TatI WGTACW 1 cut(s) 402
TauI GCSGC 1 cut(s) 379
TfiI GAWTC 3 cut(s) 81, 257, 995
Tru1I TTAA 3 cut(s) 462, 564, 959
Tru9I TTAA 3 cut(s) 462, 564, 959
TscAI CASTG 1 cut(s) 1069
TseFI GTSAC 2 cut(s) 1002, 1060
TseI GCWGC 7 cut(s) 379, 432, 679, 822, 825, 1144, 1147
Tsp45I GTSAC 2 cut(s) 1002, 1060
TspDTI ATGAA 3 cut(s) 136, 744, 870
TspGWI ACGGA 2 cut(s) 115, 605
TspRI CASTG 1 cut(s) 1069
Tth111I GACNNNGTC 1 cut(s) 1058
VpaK11BI GGWCC 1 cut(s) 1106
VspI ATTAAT 1 cut(s) 564
XapI RAATTY 1 cut(s) 251
XceI RCATGY 2 cut(s) 71, 721
XcmI CCANNNNNNNNNTGG 1 cut(s) 40
XmiI GTMKAC 1 cut(s) 739
XmnI GAANNNNTTC 1 cut(s) 805
XspI CTAG 6 cut(s) 416, 785, 798, 816, 861, 1091
ZrmI AGTACT 1 cut(s) 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.