RchiOBHm_Chr2g0107801

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
19395295 .. 19397806
2512 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48180

Sequence Viewer

Length: 1158 bp
ATGGCAGAAACAGAAGACCTACCAGAAGAGATTATAGTGAATATCTTTACTTGGTTGCCCGTCAAGTCCTTGATCCGATTCACCTCCGTTTCGAAACGCTTGCACTCCATTATATTGTCCGATCCCAAATTCGCCCAATCCCAATTCGATGCAGCTCGGCAGCAGAAGACCCTCAATCGCAGACTCCTCGTCTCCACCGACGCCCCTCGACTCGAGCTCGACTCCCTAGACTTGGATACTCCGTCGTTTGGAGAGCCTTCCTCCGTTAGAAAGCTCAGCTTCCCTTTCCCGCCACGACCGGGCGGTTGTGTCAAGCTGCTGGGCTCCTGCAATGGTCTGGTATTTGTGGCTGTTGATGAGAAATTGTTTTATATCTGGAACCCATCTATTGGATTCTTGAAGCAATTACCTGATCCAGGTTTTCCCTTAGCTGAAAATGTGATACTCTTTTATGGTGTTGGCTATTTGTCCGCCACCCATGATTACAAAGTTTTGGTTGCCTCCTATGACTTTCGTGAAGAGGAGATAGAGGTCGAGATGTTCTCATTGAGAACTCACATTTGGCTGAAGATTGAAACCCCTTGCCTAAACATCCCTTTTCTACTCGATCTTCGGGGAACTCTTTCGAATGATGCACTTCATTGGCTAAACTACGTCGATGACAACAAGGATGAAATAGTTTCTTTTGACTTGGAAGACGGGGTGTTCCGGAGAATGCCACCGCCTAATTTCGAGCATGATGGTAAGACTTTCAGCAAGCTCGGGGTTTGTGGAGGGTGCCTGTGTGTATCGCGTTATCCGGATGGGCCTTTTGACTCTATTGATTTCTGGGTCATGAGAGAATATGCCGTCAGTGGCTCATGGATTATGCTCTTTACCTTAAAGCTCTCCCATCCGCCTGAGTTGCCCTCGCGTTTCGGCCAAATCTTGGTTCTGGAAAGTAGTACAGTTGCCGCGAGATGGACTGACGGGGGATCCAAGTTGATAAAGATTGATCATAAAGAAGACGAGAAGCTTGGGCGGTATATGCTTAAGGGGGTTCGCGTGTGTATGATTGAATATGAAGAGAGTCTACTTTGGATTGGTAGTTATCATCCAGTTGAAAAGAAAGAGCAGGTCCAGATATTCGAAACCCATCAGAAGGCCTCAGGAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

385

Amino Acids

43.84

Weight (kDa)

5.32

Isoelectric Point (pI)

53.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 2.1e-08 F-box-like
F-box PF00646 6 - 43 2e-09 F-box domain
FBA_3 PF08268 88 - 281 4.9e-13 F-box associated beta propeller domain
FBA_1 PF07734 109 - 322 9.2e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1105
AccB1I GGYRCC 1 cut(s) 777
AccB7I CCANNNNNTGG 2 cut(s) 389, 928
AccI GTMKAC 1 cut(s) 1072
AccII CGCG 4 cut(s) 793, 913, 956, 1044
AccIII TCCGGA 2 cut(s) 708, 799
AciI CCGC 7 cut(s) 290, 303, 471, 722, 896, 954, 1021
AclWI GGATC 5 cut(s) 67, 116, 407, 969, 982
AcoI YGGCCR 1 cut(s) 919
AcsI RAATTY 1 cut(s) 128
AcuI CTGAAG 1 cut(s) 587
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 1 cut(s) 946
AfiI CCNNNNNNNGG 8 cut(s) 232, 248, 299, 389, 416, 928, 960, 1141
AflII CTTAAG 1 cut(s) 1031
AgsI TTSAA 4 cut(s) 400, 575, 1058, 1103
AhdI GACNNNNNGTC 1 cut(s) 188
AjnI CCWGG 1 cut(s) 415
AjuI GAANNNNNNNTTGG 4 cut(s) 544, 576, 915, 947
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 1 cut(s) 196
AlwI GGATC 5 cut(s) 67, 116, 407, 969, 982
Ama87I CYCGRG 2 cut(s) 212, 761
Aor13HI TCCGGA 2 cut(s) 708, 799
AoxI GGCC 3 cut(s) 806, 919, 1143
ApeKI GCWGC 3 cut(s) 152, 160, 316
ApoI RAATTY 1 cut(s) 128
Asp700I GAANNNNTTC 1 cut(s) 622
AspS9I GGNCC 2 cut(s) 806, 1117
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 1 cut(s) 73
AsuII TTCGAA 3 cut(s) 92, 626, 1128
AvaI CYCGRG 2 cut(s) 212, 761
AvaII GGWCC 1 cut(s) 1117
AxyI CCTNAGG 1 cut(s) 1147
BamHI GGATCC 1 cut(s) 974
BanI GGYRCC 1 cut(s) 777
BanII GRGCYC 2 cut(s) 219, 326
BarI GAAGNNNNNNTAC 2 cut(s) 1056, 1088
BbsI GAAGAC 4 cut(s) 21, 173, 702, 1011
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 3 cut(s) 164, 172, 303
BccI CCATC 6 cut(s) 391, 734, 797, 900, 954, 1143
BceAI ACGGC 1 cut(s) 833
BcgI CGANNNNNNTGC 4 cut(s) 82, 116, 169, 203
BciT130I CCWGG 1 cut(s) 417
BciVI GTATCC 1 cut(s) 229
BclI TGATCA 1 cut(s) 994
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 1 cut(s) 196
BfaI CTAG 1 cut(s) 227
BfrI CTTAAG 1 cut(s) 1031
BfuAI ACCTGC 1 cut(s) 1105
BfuI GTATCC 1 cut(s) 229
BisI GCNGC 4 cut(s) 153, 161, 317, 954
BlpI GCTNAGC 1 cut(s) 275
BlsI GCNGC 4 cut(s) 154, 162, 318, 955
Bme1390I CCNGG 2 cut(s) 300, 417
Bme18I GGWCC 1 cut(s) 1117
BmeRI GACNNNNNGTC 1 cut(s) 188
BmeT110I CYCGRG 2 cut(s) 212, 761
BmgT120I GGNCC 2 cut(s) 806, 1117
BmiI GGNNCC 4 cut(s) 325, 380, 779, 976
BmrFI CCNGG 2 cut(s) 300, 417
BmsI GCATC 2 cut(s) 139, 622
BpiI GAAGAC 4 cut(s) 21, 173, 702, 1011
BplI GAGNNNNNCTC 8 cut(s) 206, 238, 245, 277, 527, 559, 893, 925
Bpu10I CCTNAGC 1 cut(s) 427
Bpu1102I GCTNAGC 1 cut(s) 275
Bpu14I TTCGAA 3 cut(s) 92, 626, 1128
BpuMI CCSGG 1 cut(s) 300
BsaHI GRCGYC 1 cut(s) 201
BsaWI WCCGGW 2 cut(s) 708, 799
Bsc4I CCNNNNNNNGG 8 cut(s) 232, 248, 299, 389, 416, 928, 960, 1141
Bse1I ACTGG 1 cut(s) 1097
Bse21I CCTNAGG 1 cut(s) 1147
Bse3DI GCAATG 1 cut(s) 337
BseAI TCCGGA 2 cut(s) 708, 799
BseBI CCWGG 1 cut(s) 417
BseGI GGATG 5 cut(s) 591, 676, 808, 892, 1093
BseLI CCNNNNNNNGG 8 cut(s) 232, 248, 299, 389, 416, 928, 960, 1141
BseMI GCAATG 1 cut(s) 337
BseMII CTCAG 2 cut(s) 289, 891
BseNI ACTGG 1 cut(s) 1097
BseRI GAGGAG 2 cut(s) 176, 536
BseXI GCAGC 3 cut(s) 164, 172, 303
BseYI CCCAGC 1 cut(s) 319
Bsh1236I CGCG 4 cut(s) 793, 913, 956, 1044
Bsh1285I CGRYCG 1 cut(s) 299
BshFI GGCC 3 cut(s) 808, 921, 1145
BshNI GGYRCC 1 cut(s) 777
BsiEI CGRYCG 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 219
BsiHKCI CYCGRG 2 cut(s) 212, 761
BsiSI CCGG 3 cut(s) 299, 709, 800
BslI CCNNNNNNNGG 8 cut(s) 232, 248, 299, 389, 416, 928, 960, 1141
BsmAI GTCTC 1 cut(s) 196
BsmBI CGTCTC 1 cut(s) 196
BsmI GAATGC 1 cut(s) 720
BsnI GGCC 3 cut(s) 808, 921, 1145
BsoBI CYCGRG 2 cut(s) 212, 761
Bsp119I TTCGAA 3 cut(s) 92, 626, 1128
Bsp1286I GDGCHC 2 cut(s) 219, 326
Bsp13I TCCGGA 2 cut(s) 708, 799
Bsp143I GATC 6 cut(s) 72, 121, 412, 607, 974, 994
Bsp1720I GCTNAGC 1 cut(s) 275
BspACI CCGC 7 cut(s) 290, 303, 471, 722, 896, 954, 1021
BspANI GGCC 3 cut(s) 808, 921, 1145
BspCNI CTCAG 2 cut(s) 288, 892
BspEI TCCGGA 2 cut(s) 708, 799
BspFNI CGCG 4 cut(s) 793, 913, 956, 1044
BspHI TCATGA 1 cut(s) 834
BspLI GGNNCC 4 cut(s) 325, 380, 779, 976
BspMI ACCTGC 1 cut(s) 1105
BspPI GGATC 5 cut(s) 67, 116, 407, 969, 982
BspT104I TTCGAA 3 cut(s) 92, 626, 1128
BspT107I GGYRCC 1 cut(s) 777
BspTI CTTAAG 1 cut(s) 1031
BsrDI GCAATG 1 cut(s) 337
BsrI ACTGG 1 cut(s) 1097
BssMI GATC 6 cut(s) 72, 121, 412, 607, 974, 994
BssNI GRCGYC 1 cut(s) 201
Bst2UI CCWGG 1 cut(s) 417
Bst4CI ACNGT 1 cut(s) 949
Bst6I CTCTTC 3 cut(s) 21, 513, 1059
BstACI GRCGYC 1 cut(s) 201
BstAFI CTTAAG 1 cut(s) 1031
BstBI TTCGAA 3 cut(s) 92, 626, 1128
BstC8I GCNNGC 2 cut(s) 101, 758
BstDEI CTNAG 4 cut(s) 275, 427, 900, 1147
BstENI CCTNNNNNAGG 1 cut(s) 414
BstF5I GGATG 5 cut(s) 591, 676, 808, 892, 1093
BstFNI CGCG 4 cut(s) 793, 913, 956, 1044
BstKTI GATC 6 cut(s) 75, 124, 415, 610, 977, 997
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 6 cut(s) 72, 121, 412, 607, 974, 994
BstMCI CGRYCG 1 cut(s) 299
BstMWI GCNNNNNNNGC 2 cut(s) 904, 1027
BstNI CCWGG 1 cut(s) 417
BstSCI CCNGG 2 cut(s) 298, 415
BstUI CGCG 4 cut(s) 793, 913, 956, 1044
BstV1I GCAGC 3 cut(s) 164, 172, 303
BstV2I GAAGAC 4 cut(s) 21, 173, 702, 1011
BstX2I RGATCY 1 cut(s) 974
BstYI RGATCY 1 cut(s) 974
Bsu36I CCTNAGG 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 229
BsuRI GGCC 3 cut(s) 808, 921, 1145
BtsCI GGATG 5 cut(s) 591, 676, 808, 892, 1093
BtsIMutI CAGTG 1 cut(s) 859
BveI ACCTGC 1 cut(s) 1105
Cac8I GCNNGC 2 cut(s) 101, 758
CciI TCATGA 1 cut(s) 834
Cfr13I GGNCC 2 cut(s) 806, 1117
CseI GACGC 1 cut(s) 209
Csp6I GTAC 1 cut(s) 945
CviAII CATG 4 cut(s) 479, 737, 835, 861
CviQI GTAC 1 cut(s) 945
DdeI CTNAG 4 cut(s) 275, 427, 900, 1147
DpnI GATC 6 cut(s) 74, 123, 414, 609, 976, 996
DpnII GATC 6 cut(s) 72, 121, 412, 607, 974, 994
DriI GACNNNNNGTC 1 cut(s) 188
EaeI YGGCCR 1 cut(s) 919
Eam1104I CTCTTC 3 cut(s) 21, 513, 1059
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 3 cut(s) 21, 513, 1059
EciI GGCGGA 2 cut(s) 460, 885
Ecl136II GAGCTC 1 cut(s) 217
Eco147I AGGCCT 1 cut(s) 1145
Eco24I GRGCYC 2 cut(s) 219, 326
Eco47I GGWCC 1 cut(s) 1117
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 587
Eco81I CCTNAGG 1 cut(s) 1147
Eco88I CYCGRG 2 cut(s) 212, 761
EcoICRI GAGCTC 1 cut(s) 217
EcoNI CCTNNNNNAGG 1 cut(s) 414
EcoRII CCWGG 1 cut(s) 415
EcoT38I GRGCYC 2 cut(s) 219, 326
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 4 cut(s) 482, 740, 838, 864
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FatI CATG 4 cut(s) 478, 736, 834, 860
FauI CCCGC 1 cut(s) 297
FbaI TGATCA 1 cut(s) 994
FblI GTMKAC 1 cut(s) 1072
Fnu4HI GCNGC 4 cut(s) 153, 161, 317, 954
FokI GGATG 5 cut(s) 578, 683, 815, 879, 1080
FriOI GRGCYC 2 cut(s) 219, 326
Fsp4HI GCNGC 4 cut(s) 153, 161, 317, 954
FspBI CTAG 1 cut(s) 227
GluI GCNGC 4 cut(s) 153, 161, 317, 954
GsaI CCCAGC 1 cut(s) 323
HaeIII GGCC 3 cut(s) 808, 921, 1145
HapII CCGG 3 cut(s) 299, 709, 800
HgaI GACGC 1 cut(s) 209
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 4 cut(s) 482, 740, 838, 864
HindIII AAGCTT 1 cut(s) 1013
HinfI GANTC 7 cut(s) 78, 183, 210, 221, 393, 815, 1069
HpaII CCGG 3 cut(s) 299, 709, 800
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 1073
Hpy188I TCNGA 3 cut(s) 77, 121, 1140
Hpy8I GTNNAC 1 cut(s) 1073
Hpy99I CGWCG 3 cut(s) 203, 247, 659
HpyAV CCTTC 2 cut(s) 267, 1135
HpyCH4III ACNGT 1 cut(s) 949
HpyCH4IV ACGT 1 cut(s) 654
HpyCH4V TGCA 4 cut(s) 103, 152, 330, 635
HpyF10VI GCNNNNNNNGC 2 cut(s) 904, 1027
HpyF3I CTNAG 4 cut(s) 275, 427, 900, 1147
HpySE526I ACGT 1 cut(s) 654
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 4 cut(s) 482, 740, 838, 864
Kpn2I TCCGGA 2 cut(s) 708, 799
Ksp22I TGATCA 1 cut(s) 994
Kzo9I GATC 6 cut(s) 72, 121, 412, 607, 974, 994
LmnI GCTCC 1 cut(s) 329
Lsp1109I GCAGC 3 cut(s) 164, 172, 303
LweI GCATC 2 cut(s) 139, 622
MaeI CTAG 1 cut(s) 227
MaeII ACGT 1 cut(s) 654
MalI GATC 6 cut(s) 74, 123, 414, 609, 976, 996
MboI GATC 6 cut(s) 72, 121, 412, 607, 974, 994
MboII GAAGA 9 cut(s) 26, 38, 178, 530, 580, 602, 707, 1016, 1076
MflI RGATCY 1 cut(s) 974
MhlI GDGCHC 2 cut(s) 219, 326
MluCI AATT 5 cut(s) 128, 143, 362, 404, 727
MlyI GAGTC 5 cut(s) 177, 204, 215, 809, 1078
MroI TCCGGA 2 cut(s) 708, 799
MroXI GAANNNNTTC 1 cut(s) 622
MseI TTAA 2 cut(s) 881, 1032
MspCI CTTAAG 1 cut(s) 1031
MspI CCGG 3 cut(s) 299, 709, 800
MspR9I CCNGG 2 cut(s) 300, 417
Mva1269I GAATGC 1 cut(s) 720
MvaI CCWGG 1 cut(s) 417
MvnI CGCG 4 cut(s) 793, 913, 956, 1044
MwoI GCNNNNNNNGC 2 cut(s) 904, 1027
NciI CCSGG 1 cut(s) 300
NdeII GATC 6 cut(s) 72, 121, 412, 607, 974, 994
NlaIII CATG 4 cut(s) 482, 740, 838, 864
NlaIV GGNNCC 4 cut(s) 325, 380, 779, 976
NmeAIII GCCGAG 1 cut(s) 136
NspV TTCGAA 3 cut(s) 92, 626, 1128
PaeR7I CTCGAG 1 cut(s) 212
PagI TCATGA 1 cut(s) 834
PceI AGGCCT 1 cut(s) 1145
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PctI GAATGC 1 cut(s) 720
PdmI GAANNNNTTC 1 cut(s) 622
PfeI GAWTC 2 cut(s) 78, 393
PflMI CCANNNNNTGG 2 cut(s) 389, 928
PkrI GCNGC 4 cut(s) 154, 162, 318, 955
PleI GAGTC 5 cut(s) 177, 204, 215, 809, 1077
PpsI GAGTC 5 cut(s) 177, 204, 215, 809, 1077
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 1 cut(s) 415
PspFI CCCAGC 1 cut(s) 319
PspGI CCWGG 1 cut(s) 415
PspN4I GGNNCC 4 cut(s) 325, 380, 779, 976
PspPI GGNCC 2 cut(s) 806, 1117
PspXI VCTCGAGB 1 cut(s) 212
PsuI RGATCY 1 cut(s) 974
RsaI GTAC 1 cut(s) 946
RsaNI GTAC 1 cut(s) 945
SacI GAGCTC 1 cut(s) 219
SaqAI TTAA 2 cut(s) 881, 1032
SatI GCNGC 4 cut(s) 153, 161, 317, 954
Sau3AI GATC 6 cut(s) 72, 121, 412, 607, 974, 994
Sau96I GGNCC 2 cut(s) 806, 1117
SchI GAGTC 5 cut(s) 177, 204, 215, 809, 1078
ScrFI CCNGG 2 cut(s) 300, 417
SduI GDGCHC 2 cut(s) 219, 326
SfaNI GCATC 2 cut(s) 139, 622
Sfr274I CTCGAG 1 cut(s) 212
SfuI TTCGAA 3 cut(s) 92, 626, 1128
SinI GGWCC 1 cut(s) 1117
SlaI CTCGAG 1 cut(s) 212
SmlI CTYRAG 2 cut(s) 212, 1031
SmoI CTYRAG 2 cut(s) 212, 1031
Sse9I AATT 5 cut(s) 128, 143, 362, 404, 727
SseBI AGGCCT 1 cut(s) 1145
SsiI CCGC 7 cut(s) 290, 303, 471, 722, 896, 954, 1021
SspMI CTAG 1 cut(s) 227
SstI GAGCTC 1 cut(s) 219
StuI AGGCCT 1 cut(s) 1145
StyD4I CCNGG 2 cut(s) 298, 415
TaaI ACNGT 1 cut(s) 949
TaiI ACGT 1 cut(s) 657
TasI AATT 5 cut(s) 128, 143, 362, 404, 727
TatI WGTACW 1 cut(s) 944
TauI GCSGC 1 cut(s) 956
TfiI GAWTC 2 cut(s) 78, 393
Tru1I TTAA 2 cut(s) 881, 1032
Tru9I TTAA 2 cut(s) 881, 1032
TscAI CASTG 1 cut(s) 859
TseI GCWGC 3 cut(s) 152, 160, 316
TspDTI ATGAA 3 cut(s) 629, 687, 1077
TspGWI ACGGA 3 cut(s) 76, 231, 253
TspRI CASTG 1 cut(s) 859
Van91I CCANNNNNTGG 2 cut(s) 389, 928
Vha464I CTTAAG 1 cut(s) 1031
VpaK11BI GGWCC 1 cut(s) 1117
XagI CCTNNNNNAGG 1 cut(s) 414
XapI RAATTY 1 cut(s) 128
XhoI CTCGAG 1 cut(s) 212
XmiI GTMKAC 1 cut(s) 1072
XmnI GAANNNNTTC 1 cut(s) 622
XspI CTAG 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.