Rroxscaffold_1G00054720

Peptidase, trypsin-like serine and cysteine proteases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000082
Physical Location & Seq
Reverse (-)
76096997 .. 76098043
1047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00054720.1

Sequence Viewer

Length: 1047 bp
ATGGCCGAAACTGACCTACCTGAAGATGTTATACTGAACATTTTGTCTTGGCTGCCCGTCAAATCCTTGATCCGATTCACCTCCGTTTCCAAACGTTTCCGATCCATCATATTGTACGACCCCAAATTCGCCAGAACTCAATTTGAAGCAGCTTGTCAGCGGAAAACCCTAAGTTGCCTACTCATCTTCCACACCCTCATCTATCGCCTCGAATCCCTAGACTTGGATACGCCGTCCTATGGAGACATTTCCTCCGGCAGAAAGCTGAGTTTCCCTTTCGAGCAACCGGGCTCGGCTATCAGCCTACTAGGCTCATGCAATGGTTTGGTGTTTGTAGCGTTTGATGATGTCGACTTTTACATCTGGAACCCAGCAAACCGATTCTTCTTGGAGTTGCCTAAGCCAGATTTTTCTGAAGGTCAACGGCTCAGGTTTTATGGTGCTGGCTATTTGTCTGCCACCGAGGACTACAAAGTTTTCGCAGCCTCAGAAGAGATGAAGATGTTCTCCTTGAGAGCTCACGTTTGGAAAACAATCCAACACCCTGGCCATTACAGAGCCTCTAATCAGGGGACTCTTTTGAACGAGGCAATTCATTGGGTCAATGATAAAAATCAAGAAATTCTTGCTTTTGATTTCGCACAGGAGGAGTTCAGGACTATGCGTCTGCCTGATCATGACCCATGTGGTGTAAACTTGGACCATGTTGGGGTTTATGAGGGATGTCTGTGTGTATGCGGTCATCAGCGGAGGGGTTTTTGTATTTCTAACTCTGTCGATTTCTGGGTCATGAGAGAATATGACGTGTATGACTCGTGGACTAAGCTCTTTAACTTTTCCTATTCTTCCGGTGACCTATACACAGATTTCTTGGTTACCGGAAGCAGATCAGTTGCCGTAAAATGGGGTGGCAAGGAGTGGTCGTTCGTTAAGATTGATCATAAAGAAGAGAAGGAACTTCTCATGTATACGACTCGACGCAGCCGGCTTGCCCGCTACCATACCATGATTCCATGTGAAGAGAGTCTACTTCGGATTAATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

348

Amino Acids

40.39

Weight (kDa)

6.08

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 41 8.9e-11 F-box domain
F-box-like PF12937 5 - 40 2.6e-08 F-box-like
FBA_3 PF08268 84 - 276 5.8e-13 F-box associated beta propeller domain
FBA_1 PF07734 97 - 300 7.2e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 351, 968, 1027
AciI CCGC 4 cut(s) 160, 738, 748, 994
AclI AACGTT 1 cut(s) 94
AclWI GGATC 2 cut(s) 64, 96
AcoI YGGCCR 2 cut(s) 3, 547
AcsI RAATTY 2 cut(s) 125, 621
AcuI CTGAAG 2 cut(s) 42, 435
AfaI GTAC 1 cut(s) 116
AfiI CCNNNNNNNGG 4 cut(s) 223, 239, 709, 903
AflIII ACRYGT 1 cut(s) 804
AgsI TTSAA 2 cut(s) 146, 583
AhdI GACNNNNNGTC 1 cut(s) 663
AjiI CACGTC 1 cut(s) 805
AjnI CCWGG 1 cut(s) 544
AloI GAACNNNNNNTCC 2 cut(s) 908, 940
AluBI AGCT 4 cut(s) 152, 265, 518, 826
AluI AGCT 4 cut(s) 152, 265, 518, 826
Alw21I GWGCWC 1 cut(s) 520
Alw26I GTCTC 1 cut(s) 237
AlwI GGATC 2 cut(s) 64, 96
AoxI GGCC 2 cut(s) 3, 547
ApeKI GCWGC 4 cut(s) 52, 149, 482, 981
ApoI RAATTY 2 cut(s) 125, 621
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AseI ATTAAT 1 cut(s) 1038
Asp700I GAANNNNTTC 1 cut(s) 503
AspS9I GGNCC 1 cut(s) 700
AsuC2I CCSGG 1 cut(s) 288
AsuHPI GGTGA 2 cut(s) 70, 863
AvaII GGWCC 1 cut(s) 700
BalI TGGCCA 1 cut(s) 549
BanII GRGCYC 2 cut(s) 293, 520
BarI GAAGNNNNNNTAC 4 cut(s) 15, 47, 1011, 1043
BauI CACGAG 1 cut(s) 814
Bbv12I GWGCWC 1 cut(s) 520
BbvI GCAGC 4 cut(s) 39, 161, 494, 993
BccI CCATC 1 cut(s) 113
BceAI ACGGC 3 cut(s) 217, 440, 881
BciT130I CCWGG 1 cut(s) 546
BciVI GTATCC 1 cut(s) 220
BclI TGATCA 2 cut(s) 673, 937
BcnI CCSGG 1 cut(s) 288
BcoDI GTCTC 1 cut(s) 237
BfaI CTAG 2 cut(s) 218, 308
BfuI GTATCC 1 cut(s) 220
BglI GCCNNNNNGGC 1 cut(s) 309
BisI GCNGC 4 cut(s) 53, 150, 483, 982
BlsI GCNGC 4 cut(s) 54, 151, 484, 983
Bme1390I CCNGG 2 cut(s) 288, 546
Bme18I GGWCC 1 cut(s) 700
BmeRI GACNNNNNGTC 1 cut(s) 663
BmgBI CACGTC 1 cut(s) 805
BmgT120I GGNCC 1 cut(s) 700
BmiI GGNNCC 1 cut(s) 368
BmrFI CCNGG 2 cut(s) 288, 546
Bpu10I CCTNAGC 2 cut(s) 399, 428
BpuEI CTTGAG 1 cut(s) 532
BpuMI CCSGG 1 cut(s) 288
BsaBI GATNNNNATC 1 cut(s) 612
BsaJI CCNNGG 2 cut(s) 462, 544
BsaWI WCCGGW 2 cut(s) 848, 878
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 908, 938
Bsc4I CCNNNNNNNGG 4 cut(s) 223, 239, 709, 903
Bse118I RCCGGY 1 cut(s) 984
Bse3DI GCAATG 1 cut(s) 325
Bse8I GATNNNNATC 1 cut(s) 612
BseBI CCWGG 1 cut(s) 546
BseDI CCNNGG 2 cut(s) 462, 544
BseGI GGATG 1 cut(s) 728
BseJI GATNNNNATC 1 cut(s) 612
BseLI CCNNNNNNNGG 4 cut(s) 223, 239, 709, 903
BseMI GCAATG 1 cut(s) 325
BseMII CTCAG 3 cut(s) 257, 442, 501
BseRI GAGGAG 1 cut(s) 662
BseXI GCAGC 4 cut(s) 39, 161, 494, 993
BseYI CCCAGC 1 cut(s) 370
BshFI GGCC 2 cut(s) 5, 549
BsiHKAI GWGCWC 1 cut(s) 520
BsiSI CCGG 5 cut(s) 255, 287, 849, 879, 985
BslFI GGGAC 1 cut(s) 586
BslI CCNNNNNNNGG 4 cut(s) 223, 239, 709, 903
BsmAI GTCTC 1 cut(s) 237
BsmFI GGGAC 1 cut(s) 586
BsnI GGCC 2 cut(s) 5, 549
Bsp1286I GDGCHC 2 cut(s) 293, 520
Bsp143I GATC 5 cut(s) 69, 101, 673, 887, 937
BspACI CCGC 4 cut(s) 160, 738, 748, 994
BspANI GGCC 2 cut(s) 5, 549
BspCNI CTCAG 3 cut(s) 258, 441, 500
BspHI TCATGA 2 cut(s) 676, 789
BspLI GGNNCC 1 cut(s) 368
BspPI GGATC 2 cut(s) 64, 96
BsrDI GCAATG 1 cut(s) 325
BsrFI RCCGGY 1 cut(s) 984
BssAI RCCGGY 1 cut(s) 984
BssECI CCNNGG 2 cut(s) 462, 544
BssMI GATC 5 cut(s) 69, 101, 673, 887, 937
BssNAI GTATAC 1 cut(s) 969
BssSI CACGAG 1 cut(s) 814
Bst1107I GTATAC 1 cut(s) 969
Bst2BI CACGAG 1 cut(s) 814
Bst2UI CCWGG 1 cut(s) 546
Bst6I CTCTTC 3 cut(s) 486, 942, 1014
BstC8I GCNNGC 4 cut(s) 445, 986, 990, 994
BstDEI CTNAG 6 cut(s) 170, 266, 399, 428, 487, 822
BstEII GGTNACC 2 cut(s) 851, 874
BstF5I GGATG 1 cut(s) 728
BstKTI GATC 5 cut(s) 72, 104, 676, 890, 940
BstMAI GTCTC 1 cut(s) 237
BstMBI GATC 5 cut(s) 69, 101, 673, 887, 937
BstMWI GCNNNNNNNGC 1 cut(s) 309
BstNI CCWGG 1 cut(s) 546
BstPI GGTNACC 2 cut(s) 851, 874
BstSCI CCNGG 2 cut(s) 286, 544
BstV1I GCAGC 4 cut(s) 39, 161, 494, 993
BstXI CCANNNNNNTGG 1 cut(s) 545
BstZ17I GTATAC 1 cut(s) 969
BsuI GTATCC 1 cut(s) 220
BsuRI GGCC 2 cut(s) 5, 549
BtrI CACGTC 1 cut(s) 805
BtsCI GGATG 1 cut(s) 728
Cac8I GCNNGC 4 cut(s) 445, 986, 990, 994
CciI TCATGA 2 cut(s) 676, 789
Cfr10I RCCGGY 1 cut(s) 984
Cfr13I GGNCC 1 cut(s) 700
CseI GACGC 2 cut(s) 653, 987
Csp6I GTAC 1 cut(s) 115
CviAII CATG 8 cut(s) 315, 677, 684, 704, 790, 964, 1006, 1014
CviQI GTAC 1 cut(s) 115
DdeI CTNAG 6 cut(s) 170, 266, 399, 428, 487, 822
DpnI GATC 5 cut(s) 71, 103, 675, 889, 939
DpnII GATC 5 cut(s) 69, 101, 673, 887, 937
DriI GACNNNNNGTC 1 cut(s) 663
EaeI YGGCCR 2 cut(s) 3, 547
Eam1104I CTCTTC 3 cut(s) 486, 942, 1014
Eam1105I GACNNNNNGTC 1 cut(s) 663
EarI CTCTTC 3 cut(s) 486, 942, 1014
Ecl136II GAGCTC 1 cut(s) 518
Eco24I GRGCYC 2 cut(s) 293, 520
Eco47I GGWCC 1 cut(s) 700
Eco53kI GAGCTC 1 cut(s) 518
Eco57I CTGAAG 2 cut(s) 42, 435
Eco91I GGTNACC 2 cut(s) 851, 874
EcoICRI GAGCTC 1 cut(s) 518
EcoO65I GGTNACC 2 cut(s) 851, 874
EcoRII CCWGG 1 cut(s) 544
EcoT38I GRGCYC 2 cut(s) 293, 520
FaeI CATG 8 cut(s) 318, 680, 687, 707, 793, 967, 1009, 1017
FalI AAGNNNNNCTT 2 cut(s) 609, 641
FaqI GGGAC 1 cut(s) 586
FatI CATG 8 cut(s) 314, 676, 683, 703, 789, 963, 1005, 1013
FauI CCCGC 1 cut(s) 1001
FbaI TGATCA 2 cut(s) 673, 937
FblI GTMKAC 3 cut(s) 351, 968, 1027
Fnu4HI GCNGC 4 cut(s) 53, 150, 483, 982
FokI GGATG 1 cut(s) 735
FriOI GRGCYC 2 cut(s) 293, 520
Fsp4HI GCNGC 4 cut(s) 53, 150, 483, 982
FspBI CTAG 2 cut(s) 218, 308
GluI GCNGC 4 cut(s) 53, 150, 483, 982
GsaI CCCAGC 1 cut(s) 374
HaeIII GGCC 2 cut(s) 5, 549
HapII CCGG 5 cut(s) 255, 287, 849, 879, 985
HgaI GACGC 2 cut(s) 653, 987
Hin1II CATG 8 cut(s) 318, 680, 687, 707, 793, 967, 1009, 1017
HincII GTYRAC 2 cut(s) 352, 422
HindII GTYRAC 2 cut(s) 352, 422
HinfI GANTC 8 cut(s) 75, 212, 381, 574, 812, 973, 1009, 1024
HpaII CCGG 5 cut(s) 255, 287, 849, 879, 985
HphI GGTGA 2 cut(s) 70, 863
Hpy166II GTNNAC 6 cut(s) 352, 422, 694, 819, 969, 1028
Hpy188I TCNGA 5 cut(s) 74, 101, 415, 490, 1035
Hpy188III TCNNGA 5 cut(s) 364, 617, 655, 677, 790
Hpy8I GTNNAC 6 cut(s) 352, 422, 694, 819, 969, 1028
Hpy99I CGWCG 1 cut(s) 981
HpyAV CCTTC 2 cut(s) 410, 946
HpyCH4IV ACGT 3 cut(s) 94, 522, 804
HpyCH4V TGCA 1 cut(s) 318
HpyF10VI GCNNNNNNNGC 1 cut(s) 309
HpyF3I CTNAG 6 cut(s) 170, 266, 399, 428, 487, 822
HpySE526I ACGT 3 cut(s) 94, 522, 804
Hsp92II CATG 8 cut(s) 318, 680, 687, 707, 793, 967, 1009, 1017
KroI GCCGGC 1 cut(s) 984
KroNI GCCGGC 1 cut(s) 986
Ksp22I TGATCA 2 cut(s) 673, 937
Kzo9I GATC 5 cut(s) 69, 101, 673, 887, 937
Lsp1109I GCAGC 4 cut(s) 39, 161, 494, 993
MaeI CTAG 2 cut(s) 218, 308
MaeII ACGT 3 cut(s) 94, 522, 804
MaeIII GTNAC 2 cut(s) 851, 874
MalI GATC 5 cut(s) 71, 103, 675, 889, 939
MboI GATC 5 cut(s) 69, 101, 673, 887, 937
MboII GAAGA 8 cut(s) 35, 178, 376, 503, 511, 837, 959, 1031
MhlI GDGCHC 2 cut(s) 293, 520
MlsI TGGCCA 1 cut(s) 549
MluCI AATT 5 cut(s) 125, 140, 591, 621, 1039
MluNI TGGCCA 1 cut(s) 549
MlyI GAGTC 4 cut(s) 568, 806, 967, 1033
MmeI TCCRAC 1 cut(s) 562
Mox20I TGGCCA 1 cut(s) 549
MroNI GCCGGC 1 cut(s) 984
MroXI GAANNNNTTC 1 cut(s) 503
MscI TGGCCA 1 cut(s) 549
MseI TTAA 3 cut(s) 831, 930, 1038
Msp20I TGGCCA 1 cut(s) 549
MspA1I CMGCKG 2 cut(s) 160, 748
MspI CCGG 5 cut(s) 255, 287, 849, 879, 985
MspR9I CCNGG 2 cut(s) 288, 546
MvaI CCWGG 1 cut(s) 546
MwoI GCNNNNNNNGC 1 cut(s) 309
NaeI GCCGGC 1 cut(s) 986
NciI CCSGG 1 cut(s) 288
NdeII GATC 5 cut(s) 69, 101, 673, 887, 937
NgoMIV GCCGGC 1 cut(s) 984
NlaIII CATG 8 cut(s) 318, 680, 687, 707, 793, 967, 1009, 1017
NlaIV GGNNCC 1 cut(s) 368
NmeAIII GCCGAG 1 cut(s) 272
NmuCI GTSAC 1 cut(s) 851
PagI TCATGA 2 cut(s) 676, 789
PdiI GCCGGC 1 cut(s) 986
PdmI GAANNNNTTC 1 cut(s) 503
PfeI GAWTC 4 cut(s) 75, 212, 381, 1009
PkrI GCNGC 4 cut(s) 54, 151, 484, 983
PleI GAGTC 4 cut(s) 568, 806, 967, 1032
PpsI GAGTC 4 cut(s) 568, 806, 967, 1032
PshBI ATTAAT 1 cut(s) 1038
Psp124BI GAGCTC 1 cut(s) 520
Psp1406I AACGTT 1 cut(s) 94
Psp6I CCWGG 1 cut(s) 544
PspEI GGTNACC 2 cut(s) 851, 874
PspFI CCCAGC 1 cut(s) 370
PspGI CCWGG 1 cut(s) 544
PspN4I GGNNCC 1 cut(s) 368
PspPI GGNCC 1 cut(s) 700
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
SacI GAGCTC 1 cut(s) 520
SalI GTCGAC 1 cut(s) 350
SaqAI TTAA 3 cut(s) 831, 930, 1038
SatI GCNGC 4 cut(s) 53, 150, 483, 982
Sau3AI GATC 5 cut(s) 69, 101, 673, 887, 937
Sau96I GGNCC 1 cut(s) 700
SchI GAGTC 4 cut(s) 568, 806, 967, 1033
ScrFI CCNGG 2 cut(s) 288, 546
SduI GDGCHC 2 cut(s) 293, 520
SinI GGWCC 1 cut(s) 700
SmlI CTYRAG 1 cut(s) 511
SmoI CTYRAG 1 cut(s) 511
Sse9I AATT 5 cut(s) 125, 140, 591, 621, 1039
SsiI CCGC 4 cut(s) 160, 738, 748, 994
SspMI CTAG 2 cut(s) 218, 308
SstI GAGCTC 1 cut(s) 520
StyD4I CCNGG 2 cut(s) 286, 544
TaiI ACGT 3 cut(s) 97, 525, 807
TaqI TCGA 5 cut(s) 210, 279, 351, 777, 976
TasI AATT 5 cut(s) 125, 140, 591, 621, 1039
TfiI GAWTC 4 cut(s) 75, 212, 381, 1009
Tru1I TTAA 3 cut(s) 831, 930, 1038
Tru9I TTAA 3 cut(s) 831, 930, 1038
TseFI GTSAC 1 cut(s) 851
TseI GCWGC 4 cut(s) 52, 149, 482, 981
Tsp45I GTSAC 1 cut(s) 851
TspDTI ATGAA 2 cut(s) 512, 584
TspGWI ACGGA 1 cut(s) 73
VpaK11BI GGWCC 1 cut(s) 700
VspI ATTAAT 1 cut(s) 1038
XapI RAATTY 2 cut(s) 125, 621
XmiI GTMKAC 3 cut(s) 351, 968, 1027
XmnI GAANNNNTTC 1 cut(s) 503
XspI CTAG 2 cut(s) 218, 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.