Rroxscaffold_6G00412930

F-box protein CPR30-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000082
Physical Location & Seq
Forward (+)
35396684 .. 35397766
1083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00412930.1

Sequence Viewer

Length: 957 bp
ATGGAGGGAGCAAACCTATCCGAAGAGATCATATTAGAGAGTATCCTCTCCTTACTGCCCGTGAAATCCTCAATCCGATTCACCTGCGTCTCCAAACGCTTCCATTTTATCATTATCTCTGACCCAAAATTCGCTAAATCCCAATTCCAAGTTGCTCGTGAGCAGAAAACCCTAACTCGTAGACTCCTTTACTCCGTAACTGACCCTCGATTCGAACCTTTAGACTTGGAGTCGCCGTCTTTTGGAGATCATTACTCTGTCAGAGAGGTGAAATTTCCTTTCCCGCCACCGGCCCCTGGTGTCACTCTACTGGGCTCCTGCAATGGTATTCTGCCGGCCACCGACGACTACAAAGTTTTCGTAGTCTCTGCTGACTTTATTGATGGCAAGGATGAGGCCGCCATTTTCTCGTCCAGAGCTCACTCTTGGAAAACACTTGAGGTTGATGCGTTTCCTATTGTCCCTTATCATGGGACTCTTTTGAAAAAGGCGCTTCATTGGCTCAATGATCAAGATGAAATCGTGGCTTTCGATTTGGCACAGGAGGATGAGCACAAGTTCAGGGAAATGCTGCTGCCAAATTTCCATGATGAAGGAGGTGGCAGACATTACAGCCATCTTGGAGTTTCTGCCGGAGGATGTCTGTCTCTTGCTCGTTATCTGCAGTTCGCTGACTGCATTGATGTATGGGTCATGAGAGAATATGATGTGCGTGACTCGTGGACTAAGCTCTATAACTTGAAGTTTTCGGATCCCCCTAGGGAGCGATGGAATTACAATCGTGTCTTGGTTATGGAAACTAGTACGGTTGCCGAGATATATGTTGGCGGCGGGGAGAACAGTGTGTTGGTAAAGATTCTTCAGAAAGAAGAAGACAAGAGTGGCATGTATAAGGTTGAGGGCGATTGGCTTAACATGATTCAATATCAAGAGAGTCTATTTCGGATAGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

318

Amino Acids

36.42

Weight (kDa)

5.21

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 115 - 316 3.6e-11 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 92
Acc36I ACCTGC 1 cut(s) 92
AccI GTMKAC 1 cut(s) 181
AciI CCGC 4 cut(s) 284, 399, 828, 831
AclWI GGATC 2 cut(s) 746, 759
AcoI YGGCCR 1 cut(s) 336
AcsI RAATTY 3 cut(s) 128, 272, 580
AcuI CTGAAG 1 cut(s) 845
AfaI GTAC 1 cut(s) 805
AfiI CCNNNNNNNGG 4 cut(s) 242, 289, 296, 470
AgsI TTSAA 3 cut(s) 484, 742, 923
AhdI GACNNNNNGTC 1 cut(s) 229
AhlI ACTAGT 1 cut(s) 800
AjnI CCWGG 1 cut(s) 295
AjuI GAANNNNNNNTTGG 2 cut(s) 830, 862
AluBI AGCT 2 cut(s) 419, 730
AluI AGCT 2 cut(s) 419, 730
Alw21I GWGCWC 2 cut(s) 421, 555
Alw26I GTCTC 3 cut(s) 94, 370, 651
AlwI GGATC 2 cut(s) 746, 759
AoxI GGCC 3 cut(s) 291, 336, 396
ApeKI GCWGC 2 cut(s) 571, 574
ApoI RAATTY 3 cut(s) 128, 272, 580
ArsI GACNNNNNNTTYG 4 cut(s) 113, 145, 194, 226
AspA2I CCTAGG 1 cut(s) 758
AspLEI GCGC 1 cut(s) 493
AspS9I GGNCC 1 cut(s) 292
AsuHPI GGTGA 2 cut(s) 73, 280
AsuII TTCGAA 1 cut(s) 213
AvrII CCTAGG 1 cut(s) 758
BamHI GGATCC 1 cut(s) 751
BanII GRGCYC 2 cut(s) 317, 421
BarI GAAGNNNNNNTAC 2 cut(s) 843, 875
BauI CACGAG 2 cut(s) 156, 718
BbsI GAAGAC 1 cut(s) 879
Bbv12I GWGCWC 2 cut(s) 421, 555
BbvI GCAGC 2 cut(s) 558, 561
BccI CCATC 3 cut(s) 377, 624, 762
BceAI ACGGC 1 cut(s) 220
BcgI CGANNNNNNTGC 2 cut(s) 66, 100
BciT130I CCWGG 1 cut(s) 297
BciVI GTATCC 1 cut(s) 53
BclI TGATCA 1 cut(s) 508
BcoDI GTCTC 3 cut(s) 94, 370, 651
BcuI ACTAGT 1 cut(s) 800
BfaI CTAG 2 cut(s) 759, 801
BfmI CTRYAG 1 cut(s) 662
BfoI RGCGCY 1 cut(s) 494
BfuAI ACCTGC 1 cut(s) 92
BfuI GTATCC 1 cut(s) 53
BisI GCNGC 4 cut(s) 399, 572, 575, 829
BlnI CCTAGG 1 cut(s) 758
BlsI GCNGC 4 cut(s) 400, 573, 576, 830
Bme1390I CCNGG 1 cut(s) 297
BmeRI GACNNNNNGTC 1 cut(s) 229
BmgT120I GGNCC 1 cut(s) 292
BmiI GGNNCC 3 cut(s) 294, 316, 753
BmrFI CCNGG 1 cut(s) 297
BmrI ACTGGG 1 cut(s) 320
BmsI GCATC 1 cut(s) 436
BmuI ACTGGG 1 cut(s) 320
BpiI GAAGAC 1 cut(s) 879
Bpu14I TTCGAA 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 458
BsaJI CCNNGG 2 cut(s) 295, 758
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 4 cut(s) 242, 289, 296, 470
Bse118I RCCGGY 2 cut(s) 289, 334
Bse1I ACTGG 1 cut(s) 315
Bse3DI GCAATG 1 cut(s) 328
BseBI CCWGG 1 cut(s) 297
BseDI CCNNGG 2 cut(s) 295, 758
BseGI GGATG 3 cut(s) 397, 553, 644
BseLI CCNNNNNNNGG 4 cut(s) 242, 289, 296, 470
BseMI GCAATG 1 cut(s) 328
BseNI ACTGG 1 cut(s) 315
BseXI GCAGC 2 cut(s) 558, 561
BshFI GGCC 3 cut(s) 293, 338, 398
BsiHKAI GWGCWC 2 cut(s) 421, 555
BsiSI CCGG 3 cut(s) 290, 335, 633
BslFI GGGAC 2 cut(s) 446, 487
BslI CCNNNNNNNGG 4 cut(s) 242, 289, 296, 470
BsmAI GTCTC 3 cut(s) 94, 370, 651
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 2 cut(s) 446, 487
BsnI GGCC 3 cut(s) 293, 338, 398
Bsp119I TTCGAA 1 cut(s) 213
Bsp1286I GDGCHC 3 cut(s) 317, 421, 555
Bsp143I GATC 4 cut(s) 27, 247, 508, 751
BspACI CCGC 4 cut(s) 284, 399, 828, 831
BspANI GGCC 3 cut(s) 293, 338, 398
BspHI TCATGA 1 cut(s) 693
BspLI GGNNCC 3 cut(s) 294, 316, 753
BspMAI CTGCAG 1 cut(s) 666
BspMI ACCTGC 1 cut(s) 92
BspPI GGATC 2 cut(s) 746, 759
BspT104I TTCGAA 1 cut(s) 213
BsrDI GCAATG 1 cut(s) 328
BsrFI RCCGGY 2 cut(s) 289, 334
BsrI ACTGG 1 cut(s) 315
BssAI RCCGGY 2 cut(s) 289, 334
BssECI CCNNGG 2 cut(s) 295, 758
BssMI GATC 4 cut(s) 27, 247, 508, 751
BssSI CACGAG 2 cut(s) 156, 718
BssT1I CCWWGG 1 cut(s) 758
Bst2BI CACGAG 2 cut(s) 156, 718
Bst2UI CCWGG 1 cut(s) 297
Bst4CI ACNGT 2 cut(s) 808, 842
Bst6I CTCTTC 1 cut(s) 18
BstBI TTCGAA 1 cut(s) 213
BstC8I GCNNGC 1 cut(s) 336
BstDEI CTNAG 1 cut(s) 726
BstF5I GGATG 3 cut(s) 397, 553, 644
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 1 cut(s) 493
BstKTI GATC 4 cut(s) 30, 250, 511, 754
BstMAI GTCTC 3 cut(s) 94, 370, 651
BstMBI GATC 4 cut(s) 27, 247, 508, 751
BstMWI GCNNNNNNNGC 1 cut(s) 499
BstNI CCWGG 1 cut(s) 297
BstNSI RCATGY 1 cut(s) 889
BstSCI CCNGG 1 cut(s) 295
BstSFI CTRYAG 1 cut(s) 662
BstV1I GCAGC 2 cut(s) 558, 561
BstV2I GAAGAC 1 cut(s) 879
BstX2I RGATCY 1 cut(s) 751
BstYI RGATCY 1 cut(s) 751
BsuI GTATCC 1 cut(s) 53
BsuRI GGCC 3 cut(s) 293, 338, 398
BtgZI GCGATG 1 cut(s) 781
BtsCI GGATG 3 cut(s) 397, 553, 644
BtsIMutI CAGTG 1 cut(s) 847
BveI ACCTGC 1 cut(s) 92
Cac8I GCNNGC 1 cut(s) 336
CciI TCATGA 1 cut(s) 693
CfoI GCGC 1 cut(s) 493
Cfr10I RCCGGY 2 cut(s) 289, 334
Cfr13I GGNCC 1 cut(s) 292
CseI GACGC 1 cut(s) 76
Csp6I GTAC 1 cut(s) 804
CviAII CATG 5 cut(s) 470, 587, 694, 886, 916
CviQI GTAC 1 cut(s) 804
DdeI CTNAG 1 cut(s) 726
DpnI GATC 4 cut(s) 29, 249, 510, 753
DpnII GATC 4 cut(s) 27, 247, 508, 751
DriI GACNNNNNGTC 1 cut(s) 229
EaeI YGGCCR 1 cut(s) 336
Eam1104I CTCTTC 1 cut(s) 18
Eam1105I GACNNNNNGTC 1 cut(s) 229
EarI CTCTTC 1 cut(s) 18
Ecl136II GAGCTC 1 cut(s) 419
Eco130I CCWWGG 1 cut(s) 758
Eco24I GRGCYC 2 cut(s) 317, 421
Eco53kI GAGCTC 1 cut(s) 419
Eco57I CTGAAG 1 cut(s) 845
EcoICRI GAGCTC 1 cut(s) 419
EcoRII CCWGG 1 cut(s) 295
EcoT14I CCWWGG 1 cut(s) 758
EcoT38I GRGCYC 2 cut(s) 317, 421
ErhI CCWWGG 1 cut(s) 758
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 5 cut(s) 473, 590, 697, 889, 919
FaqI GGGAC 2 cut(s) 446, 487
FatI CATG 5 cut(s) 469, 586, 693, 885, 915
FauI CCCGC 2 cut(s) 291, 824
FbaI TGATCA 1 cut(s) 508
FblI GTMKAC 1 cut(s) 181
Fnu4HI GCNGC 4 cut(s) 399, 572, 575, 829
FokI GGATG 3 cut(s) 404, 560, 651
FriOI GRGCYC 2 cut(s) 317, 421
Fsp4HI GCNGC 4 cut(s) 399, 572, 575, 829
FspBI CTAG 2 cut(s) 759, 801
GlaI GCGC 1 cut(s) 492
GluI GCNGC 4 cut(s) 399, 572, 575, 829
HaeII RGCGCY 1 cut(s) 494
HaeIII GGCC 3 cut(s) 293, 338, 398
HapII CCGG 3 cut(s) 290, 335, 633
HgaI GACGC 1 cut(s) 76
HhaI GCGC 1 cut(s) 493
Hin1II CATG 5 cut(s) 473, 590, 697, 889, 919
Hin6I GCGC 1 cut(s) 491
HinP1I GCGC 1 cut(s) 491
HinfI GANTC 9 cut(s) 78, 183, 210, 230, 475, 716, 856, 919, 934
HpaII CCGG 3 cut(s) 290, 335, 633
HphI GGTGA 2 cut(s) 73, 280
Hpy166II GTNNAC 2 cut(s) 182, 723
Hpy188I TCNGA 7 cut(s) 22, 77, 121, 263, 751, 864, 945
Hpy188III TCNNGA 5 cut(s) 158, 414, 512, 694, 929
Hpy8I GTNNAC 2 cut(s) 182, 723
Hpy99I CGWCG 1 cut(s) 347
HpyAV CCTTC 1 cut(s) 587
HpyCH4III ACNGT 2 cut(s) 808, 842
HpyCH4V TGCA 3 cut(s) 321, 664, 678
HpyF10VI GCNNNNNNNGC 1 cut(s) 499
HpyF3I CTNAG 1 cut(s) 726
Hsp92II CATG 5 cut(s) 473, 590, 697, 889, 919
HspAI GCGC 1 cut(s) 491
KroI GCCGGC 1 cut(s) 334
KroNI GCCGGC 1 cut(s) 336
Ksp22I TGATCA 1 cut(s) 508
Kzo9I GATC 4 cut(s) 27, 247, 508, 751
LmnI GCTCC 3 cut(s) 8, 320, 763
Lsp1109I GCAGC 2 cut(s) 558, 561
LweI GCATC 1 cut(s) 436
MaeI CTAG 2 cut(s) 759, 801
MaeIII GTNAC 3 cut(s) 196, 301, 713
MalI GATC 4 cut(s) 29, 249, 510, 753
MboI GATC 4 cut(s) 27, 247, 508, 751
MboII GAAGA 4 cut(s) 35, 851, 881, 884
MflI RGATCY 1 cut(s) 751
MhlI GDGCHC 3 cut(s) 317, 421, 555
MluCI AATT 5 cut(s) 128, 143, 272, 580, 772
MlyI GAGTC 5 cut(s) 177, 239, 469, 710, 943
MroNI GCCGGC 1 cut(s) 334
MseI TTAA 1 cut(s) 912
MspI CCGG 3 cut(s) 290, 335, 633
MspR9I CCNGG 1 cut(s) 297
MvaI CCWGG 1 cut(s) 297
MwoI GCNNNNNNNGC 1 cut(s) 499
NaeI GCCGGC 1 cut(s) 336
NdeII GATC 4 cut(s) 27, 247, 508, 751
NgoMIV GCCGGC 1 cut(s) 334
NlaIII CATG 5 cut(s) 473, 590, 697, 889, 919
NlaIV GGNNCC 3 cut(s) 294, 316, 753
NmeAIII GCCGAG 1 cut(s) 838
NmuCI GTSAC 2 cut(s) 301, 713
NspI RCATGY 1 cut(s) 889
NspV TTCGAA 1 cut(s) 213
PagI TCATGA 1 cut(s) 693
PaqCI CACCTGC 1 cut(s) 92
PcsI WCGNNNNNNNCGW 1 cut(s) 528
PdiI GCCGGC 1 cut(s) 336
PfeI GAWTC 4 cut(s) 78, 210, 856, 919
PkrI GCNGC 4 cut(s) 400, 573, 576, 830
PleI GAGTC 5 cut(s) 177, 238, 469, 710, 942
PpsI GAGTC 5 cut(s) 177, 238, 469, 710, 942
Psp124BI GAGCTC 1 cut(s) 421
Psp6I CCWGG 1 cut(s) 295
PspGI CCWGG 1 cut(s) 295
PspN4I GGNNCC 3 cut(s) 294, 316, 753
PspPI GGNCC 1 cut(s) 292
PstI CTGCAG 1 cut(s) 666
PsuI RGATCY 1 cut(s) 751
RsaI GTAC 1 cut(s) 805
RsaNI GTAC 1 cut(s) 804
SacI GAGCTC 1 cut(s) 421
SaqAI TTAA 1 cut(s) 912
SatI GCNGC 4 cut(s) 399, 572, 575, 829
Sau3AI GATC 4 cut(s) 27, 247, 508, 751
Sau96I GGNCC 1 cut(s) 292
SchI GAGTC 5 cut(s) 177, 239, 469, 710, 943
ScrFI CCNGG 1 cut(s) 297
SduI GDGCHC 3 cut(s) 317, 421, 555
SetI ASST 9 cut(s) 18, 86, 220, 270, 421, 444, 601, 732, 897
SfaNI GCATC 1 cut(s) 436
SfcI CTRYAG 1 cut(s) 662
SfuI TTCGAA 1 cut(s) 213
SmlI CTYRAG 1 cut(s) 437
SmoI CTYRAG 1 cut(s) 437
SpeI ACTAGT 1 cut(s) 800
Sse9I AATT 5 cut(s) 128, 143, 272, 580, 772
SsiI CCGC 4 cut(s) 284, 399, 828, 831
SspMI CTAG 2 cut(s) 759, 801
SstI GAGCTC 1 cut(s) 421
StyD4I CCNGG 1 cut(s) 295
StyI CCWWGG 1 cut(s) 758
TaaI ACNGT 2 cut(s) 808, 842
TaqI TCGA 3 cut(s) 208, 213, 531
TasI AATT 5 cut(s) 128, 143, 272, 580, 772
TauI GCSGC 2 cut(s) 401, 831
TfiI GAWTC 4 cut(s) 78, 210, 856, 919
Tru1I TTAA 1 cut(s) 912
Tru9I TTAA 1 cut(s) 912
TscAI CASTG 1 cut(s) 847
TseFI GTSAC 2 cut(s) 301, 713
TseI GCWGC 2 cut(s) 571, 574
Tsp45I GTSAC 2 cut(s) 301, 713
TspDTI ATGAA 3 cut(s) 485, 531, 606
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 1 cut(s) 847
XapI RAATTY 3 cut(s) 128, 272, 580
XceI RCATGY 1 cut(s) 889
XmaJI CCTAGG 1 cut(s) 758
XmiI GTMKAC 1 cut(s) 181
XspI CTAG 2 cut(s) 759, 801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.