Rw1G040530

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000082
Physical Location & Seq
Reverse (-)
67773717 .. 67780700
6984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G040530.1

Sequence Viewer

Length: 1173 bp
ATGGGGATGGCAGACCTACCGGAAGATATGATAGTGGAAATCCTTCACAGGGTTCCCCAAAAACCCTTGGTCCGATTCAGCCTTGTTTCAAAACGGTGGCATTCCATTATATGTGACGACCCACAATTCAAGAAATCCTATGTGAAATTAGCATCCGAGAAGCAAACCTTAAGTCGTAGACTCCTCCTCTGCACCGTCACAAAAGTCGGCTGTCCATTCAATAATCGTGGGTATCGTGTAAAGCTACTAGGCTCCTGCAATGGGTTGGTATGTGTAGCTCTTGTTGAGCCTGAGCAAAACTTGGATGGCCGCTACGCAGCAGCTCTTGAGTCTATCCGAAACTTGTATATTTGGAACCCATCAAACGGATTCTTCCAAAAATTACACGACCCTGGTTTTTCCGGAGAAGATGGTATCGTGGTTTACTCTGGTTTTGGCCATTTATCAGCTACAGACGACTACAAAGTTTTTGTAGCCACTGGTAGGAGCAAGTGGCGGCCAGTTGGGAATTGGTGGGACATCAAGAAGGTCAAGATATTCTCATTAAGGAGTAAGTTATGGAAAATGATTGAACTCCCTCCAGACATTAGCCTCCGGCGGCGTCGGGGGACCCTGTGCAATGAGGCCCTTCATTGGATACTCAATCCCTCTTATTCAAGAGGTATAGATCATATCGTTGCATTTGATTTGGCCAAGGAAGAGTTCAGCAGGCAAATCCCGCTGCCTGACTCTCTCATGAAGGTCCGGGGCGCATTCAAAGAACTTGGCCAAGGCGTTTATTCCGCAGGATGCCTGTGTGTGATGTCGAGTTCCCGTAAAGACTCTATTGATTTGTGGGTGATGACAGAATATGGCGTGCGTGACTCCTGGACTAAGCTCTTTAACTTTATGATTGCCAACCCGCTGCGTGACACATATGAGTGTAATGAACGACCAATCAGCATAGTTACTGAGGAGGTCATAGTTACGGAGGAGGGTACACTTTCTGTAATTATACAGAGTTGGCTTAGATGGGATGACAGGTTACTCTTGAAGATTGATCATATACAAGGGACACTAGGGAAATATAAATTGCCTAGGGGTTACGTGATTGATAACATGATTCAATGTGAAGAGATGGAATATGAAGAGAGTCCACTTTGGATTTGTAGAGATTCAAATCGCTTTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

390

Amino Acids

44.96

Weight (kDa)

8.54

Isoelectric Point (pI)

48.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 42 1.5e-08 F-box-like
F-box PF00646 5 - 42 2.1e-10 F-box domain
FBA_3 PF08268 59 - 305 1.1e-13 F-box associated beta propeller domain
FBA_1 PF07734 113 - 331 8.8e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 178
AccIII TCCGGA 1 cut(s) 401
AciI CCGC 6 cut(s) 310, 496, 598, 719, 783, 902
AcoI YGGCCR 5 cut(s) 307, 436, 497, 690, 766
AcyI GRCGYC 1 cut(s) 601
AfaI GTAC 1 cut(s) 979
AfiI CCNNNNNNNGG 5 cut(s) 49, 261, 365, 483, 633
AflII CTTAAG 1 cut(s) 169
AgsI TTSAA 9 cut(s) 90, 130, 220, 572, 657, 757, 1033, 1106, 1158
AjnI CCWGG 2 cut(s) 391, 866
AjuI GAANNNNNNNTTGG 2 cut(s) 686, 718
AluBI AGCT 5 cut(s) 244, 278, 323, 449, 877
AluI AGCT 5 cut(s) 244, 278, 323, 449, 877
Aor13HI TCCGGA 1 cut(s) 401
AoxI GGCC 6 cut(s) 307, 436, 497, 624, 690, 766
ApeKI GCWGC 4 cut(s) 317, 320, 721, 904
ArsI GACNNNNNNTTYG 2 cut(s) 157, 189
Asp700I GAANNNNTTC 1 cut(s) 42
AspA2I CCTAGG 1 cut(s) 1076
AspLEI GCGC 1 cut(s) 752
AspS9I GGNCC 4 cut(s) 70, 609, 625, 742
AsuC2I CCSGG 1 cut(s) 746
AsuHPI GGTGA 1 cut(s) 850
AvaII GGWCC 3 cut(s) 70, 609, 742
AvrII CCTAGG 1 cut(s) 1076
BalI TGGCCA 3 cut(s) 438, 692, 768
BbvI GCAGC 4 cut(s) 329, 332, 708, 891
BccI CCATC 5 cut(s) 299, 367, 404, 1005, 1111
BciT130I CCWGG 2 cut(s) 393, 868
BciVI GTATCC 1 cut(s) 630
BclI TGATCA 1 cut(s) 1039
BcnI CCSGG 1 cut(s) 746
BfaI CTAG 3 cut(s) 248, 1058, 1077
BfmI CTRYAG 1 cut(s) 450
BfrI CTTAAG 1 cut(s) 169
BfuI GTATCC 1 cut(s) 630
BisI GCNGC 7 cut(s) 310, 318, 321, 497, 599, 722, 905
BlnI CCTAGG 1 cut(s) 1076
BlsI GCNGC 7 cut(s) 311, 319, 322, 498, 600, 723, 906
Bme1390I CCNGG 3 cut(s) 393, 746, 868
Bme18I GGWCC 3 cut(s) 70, 609, 742
BmgT120I GGNCC 4 cut(s) 70, 609, 625, 742
BmiI GGNNCC 5 cut(s) 54, 253, 356, 610, 611
BmrFI CCNGG 3 cut(s) 393, 746, 868
BmsI GCATC 2 cut(s) 161, 779
BpmI CTGGAG 1 cut(s) 564
Bpu10I CCTNAGC 1 cut(s) 291
BpuEI CTTGAG 1 cut(s) 347
BpuMI CCSGG 1 cut(s) 746
BsaAI YACGTR 1 cut(s) 1087
BsaBI GATNNNNATC 1 cut(s) 1158
BsaHI GRCGYC 1 cut(s) 601
BsaJI CCNNGG 6 cut(s) 66, 391, 693, 745, 769, 1076
BsaWI WCCGGW 2 cut(s) 19, 401
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 261, 365, 483, 633
Bse1I ACTGG 2 cut(s) 484, 500
Bse3DI GCAATG 2 cut(s) 265, 625
Bse8I GATNNNNATC 1 cut(s) 1158
BseAI TCCGGA 1 cut(s) 401
BseBI CCWGG 2 cut(s) 393, 868
BseDI CCNNGG 6 cut(s) 66, 391, 693, 745, 769, 1076
BseGI GGATG 5 cut(s) 12, 152, 310, 794, 1021
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 5 cut(s) 49, 261, 365, 483, 633
BseMI GCAATG 2 cut(s) 265, 625
BseMII CTCAG 2 cut(s) 282, 942
BseNI ACTGG 2 cut(s) 484, 500
BseRI GAGGAG 4 cut(s) 173, 176, 968, 986
BseXI GCAGC 4 cut(s) 329, 332, 708, 891
BsgI GTGCAG 1 cut(s) 175
BshFI GGCC 6 cut(s) 309, 438, 499, 626, 692, 768
BsiSI CCGG 4 cut(s) 20, 402, 595, 745
BslFI GGGAC 3 cut(s) 530, 622, 1066
BslI CCNNNNNNNGG 5 cut(s) 49, 261, 365, 483, 633
BsmFI GGGAC 3 cut(s) 530, 622, 1066
BsmI GAATGC 2 cut(s) 100, 752
BsnI GGCC 6 cut(s) 309, 438, 499, 626, 692, 768
Bsp13I TCCGGA 1 cut(s) 401
Bsp143I GATC 2 cut(s) 667, 1039
BspACI CCGC 6 cut(s) 310, 496, 598, 719, 783, 902
BspANI GGCC 6 cut(s) 309, 438, 499, 626, 692, 768
BspCNI CTCAG 2 cut(s) 283, 943
BspEI TCCGGA 1 cut(s) 401
BspHI TCATGA 1 cut(s) 735
BspLI GGNNCC 5 cut(s) 54, 253, 356, 610, 611
BspTI CTTAAG 1 cut(s) 169
BsrDI GCAATG 2 cut(s) 265, 625
BsrI ACTGG 2 cut(s) 484, 500
BssECI CCNNGG 6 cut(s) 66, 391, 693, 745, 769, 1076
BssMI GATC 2 cut(s) 667, 1039
BssNI GRCGYC 1 cut(s) 601
BssT1I CCWWGG 4 cut(s) 66, 693, 769, 1076
Bst2UI CCWGG 2 cut(s) 393, 868
Bst4CI ACNGT 2 cut(s) 96, 196
Bst6I CTCTTC 3 cut(s) 693, 1107, 1122
BstACI GRCGYC 1 cut(s) 601
BstAFI CTTAAG 1 cut(s) 169
BstBAI YACGTR 1 cut(s) 1087
BstC8I GCNNGC 2 cut(s) 710, 857
BstDEI CTNAG 4 cut(s) 291, 873, 951, 1007
BstF5I GGATG 5 cut(s) 12, 152, 310, 794, 1021
BstHHI GCGC 1 cut(s) 752
BstKTI GATC 2 cut(s) 670, 1042
BstMBI GATC 2 cut(s) 667, 1039
BstMWI GCNNNNNNNGC 1 cut(s) 718
BstNI CCWGG 2 cut(s) 393, 868
BstSCI CCNGG 3 cut(s) 391, 744, 866
BstSFI CTRYAG 1 cut(s) 450
BstV1I GCAGC 4 cut(s) 329, 332, 708, 891
BsuI GTATCC 1 cut(s) 630
BsuRI GGCC 6 cut(s) 309, 438, 499, 626, 692, 768
BtsCI GGATG 5 cut(s) 12, 152, 310, 794, 1021
BtsIMutI CAGTG 1 cut(s) 477
Cac8I GCNNGC 2 cut(s) 710, 857
CciI TCATGA 1 cut(s) 735
CfoI GCGC 1 cut(s) 752
Cfr13I GGNCC 4 cut(s) 70, 609, 625, 742
CseI GACGC 1 cut(s) 590
Csp6I GTAC 1 cut(s) 978
CspCI CAANNNNNGTGG 2 cut(s) 208, 243
CviAII CATG 2 cut(s) 736, 1099
CviQI GTAC 1 cut(s) 978
DdeI CTNAG 4 cut(s) 291, 873, 951, 1007
DpnI GATC 2 cut(s) 669, 1041
DpnII GATC 2 cut(s) 667, 1039
EaeI YGGCCR 5 cut(s) 307, 436, 497, 690, 766
Eam1104I CTCTTC 3 cut(s) 693, 1107, 1122
EarI CTCTTC 3 cut(s) 693, 1107, 1122
Eco130I CCWWGG 4 cut(s) 66, 693, 769, 1076
Eco47I GGWCC 3 cut(s) 70, 609, 742
EcoO109I RGGNCCY 2 cut(s) 609, 625
EcoRII CCWGG 2 cut(s) 391, 866
EcoT14I CCWWGG 4 cut(s) 66, 693, 769, 1076
ErhI CCWWGG 4 cut(s) 66, 693, 769, 1076
FaeI CATG 2 cut(s) 739, 1102
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 3 cut(s) 530, 622, 1066
FatI CATG 2 cut(s) 735, 1098
FauI CCCGC 2 cut(s) 726, 909
FauNDI CATATG 1 cut(s) 916
FbaI TGATCA 1 cut(s) 1039
FblI GTMKAC 1 cut(s) 178
Fnu4HI GCNGC 7 cut(s) 310, 318, 321, 497, 599, 722, 905
FokI GGATG 5 cut(s) 19, 139, 317, 801, 1028
Fsp4HI GCNGC 7 cut(s) 310, 318, 321, 497, 599, 722, 905
FspBI CTAG 3 cut(s) 248, 1058, 1077
GlaI GCGC 1 cut(s) 751
GluI GCNGC 7 cut(s) 310, 318, 321, 497, 599, 722, 905
GsuI CTGGAG 1 cut(s) 564
HaeIII GGCC 6 cut(s) 309, 438, 499, 626, 692, 768
HapII CCGG 4 cut(s) 20, 402, 595, 745
HgaI GACGC 1 cut(s) 590
HhaI GCGC 1 cut(s) 752
Hin1I GRCGYC 1 cut(s) 601
Hin1II CATG 2 cut(s) 739, 1102
Hin6I GCGC 1 cut(s) 750
HinP1I GCGC 1 cut(s) 750
HpaII CCGG 4 cut(s) 20, 402, 595, 745
HphI GGTGA 1 cut(s) 850
Hpy166II GTNNAC 4 cut(s) 179, 424, 980, 1136
Hpy188I TCNGA 3 cut(s) 74, 157, 338
Hpy188III TCNNGA 9 cut(s) 130, 326, 402, 523, 532, 581, 657, 736, 1030
Hpy8I GTNNAC 4 cut(s) 179, 424, 980, 1136
Hpy99I CGWCG 1 cut(s) 606
HpyAV CCTTC 4 cut(s) 53, 520, 638, 733
HpyCH4III ACNGT 2 cut(s) 96, 196
HpyCH4IV ACGT 1 cut(s) 1086
HpyCH4V TGCA 4 cut(s) 192, 258, 618, 680
HpyF10VI GCNNNNNNNGC 1 cut(s) 718
HpyF3I CTNAG 4 cut(s) 291, 873, 951, 1007
HpySE526I ACGT 1 cut(s) 1086
Hsp92I GRCGYC 1 cut(s) 601
Hsp92II CATG 2 cut(s) 739, 1102
HspAI GCGC 1 cut(s) 750
KflI GGGWCCC 1 cut(s) 609
Kpn2I TCCGGA 1 cut(s) 401
Ksp22I TGATCA 1 cut(s) 1039
Kzo9I GATC 2 cut(s) 667, 1039
LmnI GCTCC 2 cut(s) 257, 486
Lsp1109I GCAGC 4 cut(s) 329, 332, 708, 891
LweI GCATC 2 cut(s) 161, 779
MaeI CTAG 3 cut(s) 248, 1058, 1077
MaeII ACGT 1 cut(s) 1086
MaeIII GTNAC 8 cut(s) 113, 196, 860, 908, 946, 964, 1023, 1082
MalI GATC 2 cut(s) 669, 1041
MboI GATC 2 cut(s) 667, 1039
MboII GAAGA 7 cut(s) 35, 364, 419, 710, 1045, 1124, 1139
MlsI TGGCCA 3 cut(s) 438, 692, 768
MluCI AATT 6 cut(s) 125, 146, 380, 508, 990, 1070
MluNI TGGCCA 3 cut(s) 438, 692, 768
MlyI GAGTC 6 cut(s) 174, 338, 722, 815, 857, 1141
Mox20I TGGCCA 3 cut(s) 438, 692, 768
MroI TCCGGA 1 cut(s) 401
MroXI GAANNNNTTC 1 cut(s) 42
MscI TGGCCA 3 cut(s) 438, 692, 768
MseI TTAA 3 cut(s) 170, 545, 882
MslI CAYNNNNRTG 1 cut(s) 919
Msp20I TGGCCA 3 cut(s) 438, 692, 768
MspA1I CMGCKG 2 cut(s) 721, 904
MspCI CTTAAG 1 cut(s) 169
MspI CCGG 4 cut(s) 20, 402, 595, 745
MspR9I CCNGG 3 cut(s) 393, 746, 868
Mva1269I GAATGC 2 cut(s) 100, 752
MvaI CCWGG 2 cut(s) 393, 868
MwoI GCNNNNNNNGC 1 cut(s) 718
NciI CCSGG 1 cut(s) 746
NdeI CATATG 1 cut(s) 916
NdeII GATC 2 cut(s) 667, 1039
NlaIII CATG 2 cut(s) 739, 1102
NlaIV GGNNCC 5 cut(s) 54, 253, 356, 610, 611
NmuCI GTSAC 4 cut(s) 113, 196, 860, 908
PagI TCATGA 1 cut(s) 735
PcsI WCGNNNNNNNCGW 1 cut(s) 232
PctI GAATGC 2 cut(s) 100, 752
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 4 cut(s) 75, 369, 1102, 1154
PfoI TCCNGGA 1 cut(s) 866
PkrI GCNGC 7 cut(s) 311, 319, 322, 498, 600, 723, 906
PleI GAGTC 6 cut(s) 174, 337, 722, 815, 857, 1140
PpsI GAGTC 6 cut(s) 174, 337, 722, 815, 857, 1140
Ppu21I YACGTR 1 cut(s) 1087
PpuMI RGGWCCY 1 cut(s) 609
Psp5II RGGWCCY 1 cut(s) 609
Psp6I CCWGG 2 cut(s) 391, 866
PspGI CCWGG 2 cut(s) 391, 866
PspN4I GGNNCC 5 cut(s) 54, 253, 356, 610, 611
PspPI GGNCC 4 cut(s) 70, 609, 625, 742
PspPPI RGGWCCY 1 cut(s) 609
RsaI GTAC 1 cut(s) 979
RsaNI GTAC 1 cut(s) 978
RseI CAYNNNNRTG 1 cut(s) 919
SaqAI TTAA 3 cut(s) 170, 545, 882
SatI GCNGC 7 cut(s) 310, 318, 321, 497, 599, 722, 905
Sau3AI GATC 2 cut(s) 667, 1039
Sau96I GGNCC 4 cut(s) 70, 609, 625, 742
SchI GAGTC 6 cut(s) 174, 338, 722, 815, 857, 1141
ScrFI CCNGG 3 cut(s) 393, 746, 868
SfaNI GCATC 2 cut(s) 161, 779
SfcI CTRYAG 1 cut(s) 450
SinI GGWCC 3 cut(s) 70, 609, 742
SmiMI CAYNNNNRTG 1 cut(s) 919
SmlI CTYRAG 2 cut(s) 169, 326
SmoI CTYRAG 2 cut(s) 169, 326
Sse9I AATT 6 cut(s) 125, 146, 380, 508, 990, 1070
SsiI CCGC 6 cut(s) 310, 496, 598, 719, 783, 902
SspMI CTAG 3 cut(s) 248, 1058, 1077
StyD4I CCNGG 3 cut(s) 391, 744, 866
StyI CCWWGG 4 cut(s) 66, 693, 769, 1076
TaaI ACNGT 2 cut(s) 96, 196
TaiI ACGT 1 cut(s) 1089
TaqI TCGA 1 cut(s) 806
TasI AATT 6 cut(s) 125, 146, 380, 508, 990, 1070
TauI GCSGC 3 cut(s) 312, 499, 601
TfiI GAWTC 4 cut(s) 75, 369, 1102, 1154
Tru1I TTAA 3 cut(s) 170, 545, 882
Tru9I TTAA 3 cut(s) 170, 545, 882
TscAI CASTG 1 cut(s) 484
TseFI GTSAC 4 cut(s) 113, 196, 860, 908
TseI GCWGC 4 cut(s) 317, 320, 721, 904
Tsp45I GTSAC 4 cut(s) 113, 196, 860, 908
TspDTI ATGAA 4 cut(s) 620, 752, 942, 1140
TspGWI ACGGA 2 cut(s) 381, 983
TspRI CASTG 1 cut(s) 484
Vha464I CTTAAG 1 cut(s) 169
VpaK11BI GGWCC 3 cut(s) 70, 609, 742
XcmI CCANNNNNNNNNTGG 1 cut(s) 507
XmaJI CCTAGG 1 cut(s) 1076
XmiI GTMKAC 1 cut(s) 178
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 3 cut(s) 248, 1058, 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.