RchiOBHm_Chr2g0109781

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000082
Physical Location & Seq
Reverse (-)
21104806 .. 21106723
1918 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48357

Sequence Viewer

Length: 1143 bp
ATGTCAACGGCGGCGACGGAGCACCTCCCGGAGGACCTTATCATAGTGCAAATCCTCACCAGGCTTCCGATCAAATCTCTAATCCGATTCAGCTGCTTCTCAAAGTGCTGGAGTTCCATAATTCTCTCCGATCAGCGATTCGCCAAATCGCAATTCAAGTTCGCTTCCGAGAGTAAAACCCTCAGTCGCAGACTCCTCCTCGCCACCTCCTCTAAACTGGAATCCCTAGACCCTCAAACGACGCCGTTTCCCGACGACTCTTCGATCCGAAAGCTCACCTGCCCGTTCAACCAACCGGAGCGTGTCGACTACGTACTGGGCTCGTGCAATGGCATGGTATGTGTAGCTCTTGATTTTCATGATGGTTATTATATCTGGAACCCATCTACTGCTTTGTTTCTCAAATTGCCGAACCCTAATTTTGCCTCAGAAGGGGTTATCTCCTTTTACCCAAAAATGCCAGACTTTGACCGATCAAAGACGATTATAGCTCTCCATTATTGGGGTTTTGGCTATGTTTCGGCCACCGACGACTATAAAGTTGTTGTAGAAGCTCTCTTTGCGGATTCTAAAATACCAAGGGGGCTCTTTCGAAATTCAAATGAGACACTCCATTGGCTCCACGCTGCGTGGCCCCGTGCACCCGAGTGTTACAGACTTGTTATCGCCGCCTTTGATTTGACAAAAGAAGAGTTCCGGGAAATTCCTTTACCTGTCTTTAAGGGAGATGGCACTAGTATTTATTCTTTCATAGATGTGGGAGTTGTTTCCGGAGGGTGCTTGTGTGTATGTAGGTATGAGGGACAGAGTCAGGAGCACATTCAATTATGGGTGATGAGGGAATATGATGTTCATGAATCTGTGAACTCCGCTGATCATCGAACCAAGCGGCTAATCTTCCACGGGGACAGTAGCATAGTTATGTTGAAATTCAATGCCGTGGGGGTTGAAAACAAATTGGAAAGGATTTATCTTCAGTGCAAGGATGTTGGGGATTGCTGTGATCGGTATAGCCTTGGGATGGGTCTCTGTGACGTGATACAATATGAGGAGACTCTATTCTGGCTGAATGATGCTCATGGGCTGAACGAAAGGTCACCAGACACGAGAATCAACACTTGCCCCCAAAGCAAGCCCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

380

Amino Acids

43.25

Weight (kDa)

6.08

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 8 - 46 1.2e-06 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 287
Acc36I ACCTGC 1 cut(s) 287
AccI GTMKAC 1 cut(s) 306
AccIII TCCGGA 1 cut(s) 770
AciI CCGC 5 cut(s) 11, 563, 669, 870, 889
AclWI GGATC 1 cut(s) 259
AcoI YGGCCR 1 cut(s) 522
AcsI RAATTY 3 cut(s) 595, 702, 929
AcuI CTGAAG 1 cut(s) 959
AcyI GRCGYC 1 cut(s) 242
AfaI GTAC 1 cut(s) 315
AfiI CCNNNNNNNGG 4 cut(s) 31, 432, 502, 1021
AgsI TTSAA 7 cut(s) 157, 289, 600, 824, 928, 934, 950
AhlI ACTAGT 1 cut(s) 734
AjiI CACGTC 1 cut(s) 1036
AjnI CCWGG 1 cut(s) 59
AjuI GAANNNNNNNTTGG 2 cut(s) 137, 169
AleI CACNNNNGTG 1 cut(s) 646
AluBI AGCT 5 cut(s) 93, 274, 347, 491, 554
AluI AGCT 5 cut(s) 93, 274, 347, 491, 554
Alw21I GWGCWC 3 cut(s) 24, 643, 819
Alw26I GTCTC 3 cut(s) 599, 1031, 1046
Alw44I GTGCAC 1 cut(s) 639
AlwI GGATC 1 cut(s) 259
Ama87I CYCGRG 1 cut(s) 644
Aor13HI TCCGGA 1 cut(s) 770
AoxI GGCC 2 cut(s) 522, 632
ApaLI GTGCAC 1 cut(s) 639
ApeKI GCWGC 2 cut(s) 93, 626
ApoI RAATTY 3 cut(s) 595, 702, 929
AspS9I GGNCC 2 cut(s) 34, 633
AsuC2I CCSGG 2 cut(s) 29, 698
AsuHPI GGTGA 4 cut(s) 49, 268, 844, 1089
AsuII TTCGAA 1 cut(s) 592
AvaI CYCGRG 1 cut(s) 644
AvaII GGWCC 1 cut(s) 34
BaeGI GKGCMC 1 cut(s) 643
BanII GRGCYC 2 cut(s) 323, 588
BauI CACGAG 2 cut(s) 322, 1105
Bbv12I GWGCWC 3 cut(s) 24, 643, 819
BbvI GCAGC 2 cut(s) 80, 613
BccI CCATC 4 cut(s) 356, 391, 722, 1015
BceAI ACGGC 3 cut(s) 24, 229, 923
BcgI CGANNNNNNTGC 2 cut(s) 75, 109
BciT130I CCWGG 1 cut(s) 61
BclI TGATCA 1 cut(s) 874
BcnI CCSGG 2 cut(s) 29, 698
BcoDI GTCTC 3 cut(s) 599, 1031, 1046
BcuI ACTAGT 1 cut(s) 734
BfaI CTAG 2 cut(s) 227, 735
BfuAI ACCTGC 1 cut(s) 287
BisI GCNGC 5 cut(s) 12, 94, 627, 669, 890
BlsI GCNGC 5 cut(s) 13, 95, 628, 670, 891
Bme1390I CCNGG 3 cut(s) 29, 61, 698
Bme18I GGWCC 1 cut(s) 34
BmeT110I CYCGRG 1 cut(s) 644
BmgBI CACGTC 1 cut(s) 1036
BmgT120I GGNCC 2 cut(s) 34, 633
BmiI GGNNCC 3 cut(s) 380, 620, 635
BmrFI CCNGG 3 cut(s) 29, 61, 698
BmrI ACTGGG 1 cut(s) 326
BmsI GCATC 1 cut(s) 1063
BmuI ACTGGG 1 cut(s) 326
BpmI CTGGAG 1 cut(s) 130
Bpu14I TTCGAA 1 cut(s) 592
BpuMI CCSGG 2 cut(s) 29, 698
BsaAI YACGTR 1 cut(s) 313
BsaHI GRCGYC 1 cut(s) 242
BsaI GGTCTC 1 cut(s) 1031
BsaJI CCNNGG 4 cut(s) 578, 901, 939, 1015
BsaWI WCCGGW 2 cut(s) 295, 770
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 432, 502, 1021
Bse1I ACTGG 2 cut(s) 222, 321
Bse3DI GCAATG 1 cut(s) 334
BseAI TCCGGA 1 cut(s) 770
BseBI CCWGG 1 cut(s) 61
BseDI CCNNGG 4 cut(s) 578, 901, 939, 1015
BseGI GGATG 2 cut(s) 991, 1026
BseLI CCNNNNNNNGG 4 cut(s) 31, 432, 502, 1021
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 2 cut(s) 196, 441
BseNI ACTGG 2 cut(s) 222, 321
BseRI GAGGAG 4 cut(s) 185, 188, 199, 1064
BseSI GKGCMC 1 cut(s) 643
BseXI GCAGC 2 cut(s) 80, 613
BshFI GGCC 2 cut(s) 524, 634
BsiHKAI GWGCWC 3 cut(s) 24, 643, 819
BsiHKCI CYCGRG 1 cut(s) 644
BsiSI CCGG 4 cut(s) 29, 296, 697, 771
BslFI GGGAC 2 cut(s) 816, 920
BslI CCNNNNNNNGG 4 cut(s) 31, 432, 502, 1021
BsmAI GTCTC 3 cut(s) 599, 1031, 1046
BsmFI GGGAC 2 cut(s) 816, 920
BsnI GGCC 2 cut(s) 524, 634
Bso31I GGTCTC 1 cut(s) 1031
BsoBI CYCGRG 1 cut(s) 644
Bsp119I TTCGAA 1 cut(s) 592
Bsp1286I GDGCHC 5 cut(s) 24, 323, 588, 643, 819
Bsp13I TCCGGA 1 cut(s) 770
Bsp143I GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
BspACI CCGC 5 cut(s) 11, 563, 669, 870, 889
BspANI GGCC 2 cut(s) 524, 634
BspCNI CTCAG 2 cut(s) 195, 440
BspEI TCCGGA 1 cut(s) 770
BspHI TCATGA 2 cut(s) 358, 853
BspLI GGNNCC 3 cut(s) 380, 620, 635
BspMI ACCTGC 1 cut(s) 287
BspPI GGATC 1 cut(s) 259
BspT104I TTCGAA 1 cut(s) 592
BspTNI GGTCTC 1 cut(s) 1031
BsrDI GCAATG 1 cut(s) 334
BsrI ACTGG 2 cut(s) 222, 321
BssECI CCNNGG 4 cut(s) 578, 901, 939, 1015
BssMI GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
BssNI GRCGYC 1 cut(s) 242
BssSI CACGAG 2 cut(s) 322, 1105
BssT1I CCWWGG 2 cut(s) 578, 1015
Bst2BI CACGAG 2 cut(s) 322, 1105
Bst2UI CCWGG 1 cut(s) 61
Bst4CI ACNGT 1 cut(s) 911
Bst6I CTCTTC 2 cut(s) 265, 684
BstACI GRCGYC 1 cut(s) 242
BstBAI YACGTR 1 cut(s) 313
BstBI TTCGAA 1 cut(s) 592
BstC8I GCNNGC 1 cut(s) 1133
BstDEI CTNAG 2 cut(s) 182, 427
BstDSI CCRYGG 2 cut(s) 901, 939
BstEII GGTNACC 1 cut(s) 1095
BstENI CCTNNNNNAGG 1 cut(s) 29
BstF5I GGATG 2 cut(s) 991, 1026
BstKTI GATC 6 cut(s) 72, 133, 267, 476, 877, 1006
BstMAI GTCTC 3 cut(s) 599, 1031, 1046
BstMBI GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
BstMWI GCNNNNNNNGC 2 cut(s) 560, 1128
BstNI CCWGG 1 cut(s) 61
BstPI GGTNACC 1 cut(s) 1095
BstSCI CCNGG 3 cut(s) 27, 59, 696
BstSLI GKGCMC 1 cut(s) 643
BstSNI TACGTA 1 cut(s) 313
BstV1I GCAGC 2 cut(s) 80, 613
BsuRI GGCC 2 cut(s) 524, 634
BtgI CCRYGG 2 cut(s) 901, 939
BtrI CACGTC 1 cut(s) 1036
BtsCI GGATG 2 cut(s) 991, 1026
BtsIMutI CAGTG 1 cut(s) 983
BveI ACCTGC 1 cut(s) 287
Cac8I GCNNGC 1 cut(s) 1133
CciI TCATGA 2 cut(s) 358, 853
Cfr13I GGNCC 2 cut(s) 34, 633
CseI GACGC 1 cut(s) 250
Csp6I GTAC 1 cut(s) 314
CviAII CATG 4 cut(s) 334, 359, 854, 1079
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 2 cut(s) 182, 427
DpnI GATC 6 cut(s) 71, 132, 266, 475, 876, 1005
DpnII GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
EaeI YGGCCR 1 cut(s) 522
Eam1104I CTCTTC 2 cut(s) 265, 684
EarI CTCTTC 2 cut(s) 265, 684
Eco105I TACGTA 1 cut(s) 313
Eco130I CCWWGG 2 cut(s) 578, 1015
Eco24I GRGCYC 2 cut(s) 323, 588
Eco31I GGTCTC 1 cut(s) 1031
Eco47I GGWCC 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 959
Eco88I CYCGRG 1 cut(s) 644
Eco91I GGTNACC 1 cut(s) 1095
EcoNI CCTNNNNNAGG 1 cut(s) 29
EcoO109I RGGNCCY 1 cut(s) 34
EcoO65I GGTNACC 1 cut(s) 1095
EcoRII CCWGG 1 cut(s) 59
EcoT14I CCWWGG 2 cut(s) 578, 1015
EcoT38I GRGCYC 2 cut(s) 323, 588
ErhI CCWWGG 2 cut(s) 578, 1015
FaeI CATG 4 cut(s) 337, 362, 857, 1082
FaqI GGGAC 2 cut(s) 816, 920
FatI CATG 4 cut(s) 333, 358, 853, 1078
FbaI TGATCA 1 cut(s) 874
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 5 cut(s) 12, 94, 627, 669, 890
FokI GGATG 2 cut(s) 998, 1033
FriOI GRGCYC 2 cut(s) 323, 588
Fsp4HI GCNGC 5 cut(s) 12, 94, 627, 669, 890
FspBI CTAG 2 cut(s) 227, 735
GluI GCNGC 5 cut(s) 12, 94, 627, 669, 890
GsuI CTGGAG 1 cut(s) 130
HaeIII GGCC 2 cut(s) 524, 634
HapII CCGG 4 cut(s) 29, 296, 697, 771
HgaI GACGC 1 cut(s) 250
Hin1I GRCGYC 1 cut(s) 242
Hin1II CATG 4 cut(s) 337, 362, 857, 1082
HincII GTYRAC 2 cut(s) 6, 307
HindII GTYRAC 2 cut(s) 6, 307
HpaII CCGG 4 cut(s) 29, 296, 697, 771
HphI GGTGA 4 cut(s) 49, 268, 844, 1089
Hpy166II GTNNAC 4 cut(s) 6, 307, 641, 865
Hpy188I TCNGA 6 cut(s) 69, 86, 130, 169, 269, 430
Hpy188III TCNNGA 7 cut(s) 251, 350, 359, 376, 771, 812, 854
Hpy8I GTNNAC 4 cut(s) 6, 307, 641, 865
Hpy99I CGWCG 4 cut(s) 19, 244, 257, 533
HpyAV CCTTC 1 cut(s) 425
HpyCH4III ACNGT 1 cut(s) 911
HpyCH4IV ACGT 2 cut(s) 312, 1035
HpyCH4V TGCA 4 cut(s) 49, 327, 641, 981
HpyF10VI GCNNNNNNNGC 2 cut(s) 560, 1128
HpyF3I CTNAG 2 cut(s) 182, 427
HpySE526I ACGT 2 cut(s) 312, 1035
Hsp92I GRCGYC 1 cut(s) 242
Hsp92II CATG 4 cut(s) 337, 362, 857, 1082
Kpn2I TCCGGA 1 cut(s) 770
Ksp22I TGATCA 1 cut(s) 874
Kzo9I GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
LmnI GCTCC 4 cut(s) 19, 298, 624, 814
Lsp1109I GCAGC 2 cut(s) 80, 613
LweI GCATC 1 cut(s) 1063
MaeI CTAG 2 cut(s) 227, 735
MaeII ACGT 2 cut(s) 312, 1035
MaeIII GTNAC 3 cut(s) 650, 1031, 1095
MalI GATC 6 cut(s) 71, 132, 266, 475, 876, 1005
MboI GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
MboII GAAGA 4 cut(s) 252, 701, 889, 965
MhlI GDGCHC 5 cut(s) 24, 323, 588, 643, 819
MluCI AATT 9 cut(s) 120, 152, 404, 418, 595, 702, 824, 929, 956
MlyI GAGTC 4 cut(s) 186, 251, 817, 1048
MroI TCCGGA 1 cut(s) 770
MseI TTAA 1 cut(s) 720
MslI CAYNNNNRTG 3 cut(s) 646, 755, 920
MspA1I CMGCKG 2 cut(s) 93, 872
MspI CCGG 4 cut(s) 29, 296, 697, 771
MspR9I CCNGG 3 cut(s) 29, 61, 698
MvaI CCWGG 1 cut(s) 61
MwoI GCNNNNNNNGC 2 cut(s) 560, 1128
NciI CCSGG 2 cut(s) 29, 698
NdeII GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
NlaIII CATG 4 cut(s) 337, 362, 857, 1082
NlaIV GGNNCC 3 cut(s) 380, 620, 635
NmuCI GTSAC 2 cut(s) 1031, 1095
NspV TTCGAA 1 cut(s) 592
OliI CACNNNNGTG 1 cut(s) 646
PagI TCATGA 2 cut(s) 358, 853
PaqCI CACCTGC 1 cut(s) 287
PfeI GAWTC 6 cut(s) 87, 138, 221, 566, 857, 1110
PflFI GACNNNGTC 1 cut(s) 807
PfoI TCCNGGA 2 cut(s) 27, 696
PkrI GCNGC 5 cut(s) 13, 95, 628, 670, 891
PleI GAGTC 4 cut(s) 186, 251, 816, 1048
PpsI GAGTC 4 cut(s) 186, 251, 816, 1048
Ppu21I YACGTR 1 cut(s) 313
PpuMI RGGWCCY 1 cut(s) 34
Psp5II RGGWCCY 1 cut(s) 34
Psp6I CCWGG 1 cut(s) 59
PspEI GGTNACC 1 cut(s) 1095
PspGI CCWGG 1 cut(s) 59
PspN4I GGNNCC 3 cut(s) 380, 620, 635
PspPI GGNCC 2 cut(s) 34, 633
PspPPI RGGWCCY 1 cut(s) 34
PsyI GACNNNGTC 1 cut(s) 807
PvuII CAGCTG 1 cut(s) 93
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
RseI CAYNNNNRTG 3 cut(s) 646, 755, 920
SalI GTCGAC 1 cut(s) 305
SaqAI TTAA 1 cut(s) 720
SatI GCNGC 5 cut(s) 12, 94, 627, 669, 890
Sau3AI GATC 6 cut(s) 69, 130, 264, 473, 874, 1003
Sau96I GGNCC 2 cut(s) 34, 633
SchI GAGTC 4 cut(s) 186, 251, 817, 1048
ScrFI CCNGG 3 cut(s) 29, 61, 698
SduI GDGCHC 5 cut(s) 24, 323, 588, 643, 819
SfaNI GCATC 1 cut(s) 1063
SfuI TTCGAA 1 cut(s) 592
SinI GGWCC 1 cut(s) 34
SmiMI CAYNNNNRTG 3 cut(s) 646, 755, 920
SnaBI TACGTA 1 cut(s) 313
SpeI ACTAGT 1 cut(s) 734
Sse9I AATT 9 cut(s) 120, 152, 404, 418, 595, 702, 824, 929, 956
SsiI CCGC 5 cut(s) 11, 563, 669, 870, 889
SspMI CTAG 2 cut(s) 227, 735
StyD4I CCNGG 3 cut(s) 27, 59, 696
StyI CCWWGG 2 cut(s) 578, 1015
TaaI ACNGT 1 cut(s) 911
TaiI ACGT 2 cut(s) 315, 1038
TaqI TCGA 4 cut(s) 263, 306, 592, 880
TaqII GACCGA 1 cut(s) 486
TasI AATT 9 cut(s) 120, 152, 404, 418, 595, 702, 824, 929, 956
TauI GCSGC 3 cut(s) 14, 671, 892
TfiI GAWTC 6 cut(s) 87, 138, 221, 566, 857, 1110
Tru1I TTAA 1 cut(s) 720
Tru9I TTAA 1 cut(s) 720
TscAI CASTG 1 cut(s) 983
TseFI GTSAC 2 cut(s) 1031, 1095
TseI GCWGC 2 cut(s) 93, 626
Tsp45I GTSAC 2 cut(s) 1031, 1095
TspDTI ATGAA 4 cut(s) 347, 739, 842, 870
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 1 cut(s) 983
Tth111I GACNNNGTC 1 cut(s) 807
VneI GTGCAC 1 cut(s) 639
VpaK11BI GGWCC 1 cut(s) 34
XagI CCTNNNNNAGG 1 cut(s) 29
XapI RAATTY 3 cut(s) 595, 702, 929
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 2 cut(s) 227, 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.