RLG00000031462

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000082
Physical Location & Seq
Forward (+)
5413180 .. 5414049
870 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031462

Sequence Viewer

Length: 870 bp
ATGTGTAACTCTTTATCATCGACACTGCATGGAGGATTTGGACCGTCAACTCAATTCTTCCAAAAATTACCCGCTCCTCCTTTACAAGTACAAAGAGCTCCAAGTATAGGCTATGATATACGCTGTGATGGTTTTGGCTACTTGTCAGCCATCAGCGACTACAAAGTTCTCATCTCATCAGACACTGAGCAATGCATGTTCTCATCGAACACTGACATTTGGAAAAGGATCGAAGTCCCTTTCCACCTTTGGACGAGGGATGCAGGGGCTCTTTCAAATGAGGCACTTCATTGGATTCGTAAGGATAAGAGTAAGAAGATACTTGCTTTCGATTTAACACATGAGAAGTTTCGAACTATGCTGCTGCCTGACCCCGGTTCGGGTTGGCGTATCATGGACGTGGACCTGGGGGATTTTAGAGGATGCCTGTGTGCAGTGGATTGTCTGAATCGACATACGGGCTTTATTGATATGTGGTTCATGAAAGAATATAACGTGAGTGAGTCTTGGACTAAGCTCTTTACCTTAAAGATTTCTGATCAGCCTGTGAGAATGCCTTGTGTAAGGCTAATCATGGTTATGGGAACTAGTACAGTTTTGGAGAAAGAAACTTTTGATGAGGAGGATAGGAAGGAGTGCAATTTGATAAAGAGTGGTCATGAGGAAGAGAAGTTTGAAACACTGGTTACCGTTAAAGCACCGGTTAGCAGGAAGCTGATGTGTGGCTACACGCATATGATTGGATATGAAGAGAGTCTACTCTGGGTTGGAGACCATAACAAGAAGACCTGCCCTACGGAACTGGCCAAGAAGGCTAGGAATGCTTCAGAAGCTGGGGTGCAGAATAATGGAGAACAATGCAATTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

290

Amino Acids

32.92

Weight (kDa)

6.26

Isoelectric Point (pI)

37.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 42 - 194 1.2e-10 F-box associated beta propeller domain
FBA_3 PF08268 45 - 178 3.4e-06 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 797
AccBSI CCGCTC 1 cut(s) 74
AccI GTMKAC 1 cut(s) 757
AciI CCGC 1 cut(s) 72
AclWI GGATC 1 cut(s) 236
AcoI YGGCCR 1 cut(s) 804
AcuI CTGAAG 1 cut(s) 810
AfaI GTAC 2 cut(s) 90, 592
AfiI CCNNNNNNNGG 4 cut(s) 107, 374, 379, 380
AgeI ACCGGT 1 cut(s) 700
AgsI TTSAA 2 cut(s) 276, 677
AhlI ACTAGT 1 cut(s) 587
AjiI CACGTC 1 cut(s) 400
AjnI CCWGG 1 cut(s) 405
AluBI AGCT 4 cut(s) 98, 517, 715, 833
AluI AGCT 4 cut(s) 98, 517, 715, 833
Alw21I GWGCWC 1 cut(s) 100
Alw26I GTCTC 1 cut(s) 765
AlwI GGATC 1 cut(s) 236
AlwNI CAGNNNCTG 2 cut(s) 185, 833
AoxI GGCC 1 cut(s) 804
ApeKI GCWGC 2 cut(s) 361, 364
AsiGI ACCGGT 1 cut(s) 700
AspS9I GGNCC 2 cut(s) 41, 403
AsuC2I CCSGG 1 cut(s) 375
AsuII TTCGAA 1 cut(s) 352
AvaII GGWCC 2 cut(s) 41, 403
BalI TGGCCA 1 cut(s) 806
BanII GRGCYC 2 cut(s) 100, 271
BarI GAAGNNNNNNTAC 2 cut(s) 741, 773
BbsI GAAGAC 1 cut(s) 791
Bbv12I GWGCWC 1 cut(s) 100
BbvI GCAGC 2 cut(s) 348, 351
BccI CCATC 2 cut(s) 122, 158
BciT130I CCWGG 1 cut(s) 407
BclI TGATCA 1 cut(s) 538
BcnI CCSGG 1 cut(s) 375
BcoDI GTCTC 1 cut(s) 765
BcuI ACTAGT 1 cut(s) 587
BfaI CTAG 2 cut(s) 588, 816
BfuAI ACCTGC 1 cut(s) 797
BglI GCCNNNNNGGC 1 cut(s) 812
BisI GCNGC 2 cut(s) 362, 365
BlsI GCNGC 2 cut(s) 363, 366
Bme1390I CCNGG 2 cut(s) 375, 407
Bme18I GGWCC 2 cut(s) 41, 403
BmgBI CACGTC 1 cut(s) 400
BmgT120I GGNCC 2 cut(s) 41, 403
BmrFI CCNGG 2 cut(s) 375, 407
BmsI GCATC 2 cut(s) 250, 413
BpiI GAAGAC 1 cut(s) 791
Bpu14I TTCGAA 1 cut(s) 352
BpuMI CCSGG 1 cut(s) 375
BsaI GGTCTC 1 cut(s) 765
BsaJI CCNNGG 2 cut(s) 373, 406
BsaWI WCCGGW 1 cut(s) 700
Bsc4I CCNNNNNNNGG 4 cut(s) 107, 374, 379, 380
Bse118I RCCGGY 1 cut(s) 700
Bse1I ACTGG 2 cut(s) 687, 807
Bse3DI GCAATG 1 cut(s) 197
BseBI CCWGG 1 cut(s) 407
BseDI CCNNGG 2 cut(s) 373, 406
BseGI GGATG 2 cut(s) 265, 428
BseLI CCNNNNNNNGG 4 cut(s) 107, 374, 379, 380
BseMI GCAATG 1 cut(s) 197
BseMII CTCAG 1 cut(s) 177
BseNI ACTGG 2 cut(s) 687, 807
BseRI GAGGAG 2 cut(s) 66, 635
BseXI GCAGC 2 cut(s) 348, 351
BseYI CCCAGC 1 cut(s) 833
BsgI GTGCAG 2 cut(s) 453, 860
BshFI GGCC 1 cut(s) 806
BshTI ACCGGT 1 cut(s) 700
BsiHKAI GWGCWC 1 cut(s) 100
BsiSI CCGG 2 cut(s) 375, 701
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 4 cut(s) 107, 374, 379, 380
BsmAI GTCTC 1 cut(s) 765
BsmFI GGGAC 1 cut(s) 221
BsmI GAATGC 2 cut(s) 558, 826
BsnI GGCC 1 cut(s) 806
Bso31I GGTCTC 1 cut(s) 765
Bsp119I TTCGAA 1 cut(s) 352
Bsp1286I GDGCHC 2 cut(s) 100, 271
Bsp143I GATC 2 cut(s) 228, 538
BspACI CCGC 1 cut(s) 72
BspANI GGCC 1 cut(s) 806
BspCNI CTCAG 1 cut(s) 178
BspHI TCATGA 2 cut(s) 480, 658
BspMI ACCTGC 1 cut(s) 797
BspPI GGATC 1 cut(s) 236
BspT104I TTCGAA 1 cut(s) 352
BspTNI GGTCTC 1 cut(s) 765
BsrBI CCGCTC 1 cut(s) 74
BsrDI GCAATG 1 cut(s) 197
BsrFI RCCGGY 1 cut(s) 700
BsrI ACTGG 2 cut(s) 687, 807
BssAI RCCGGY 1 cut(s) 700
BssECI CCNNGG 2 cut(s) 373, 406
BssMI GATC 2 cut(s) 228, 538
Bst2UI CCWGG 1 cut(s) 407
Bst4CI ACNGT 3 cut(s) 45, 595, 691
Bst6I CTCTTC 2 cut(s) 660, 744
BstBI TTCGAA 1 cut(s) 352
BstDEI CTNAG 2 cut(s) 186, 513
BstEII GGTNACC 1 cut(s) 685
BstF5I GGATG 2 cut(s) 265, 428
BstKTI GATC 2 cut(s) 231, 541
BstMAI GTCTC 1 cut(s) 765
BstMBI GATC 2 cut(s) 228, 538
BstMWI GCNNNNNNNGC 3 cut(s) 812, 821, 830
BstNI CCWGG 1 cut(s) 407
BstNSI RCATGY 1 cut(s) 199
BstPI GGTNACC 1 cut(s) 685
BstSCI CCNGG 2 cut(s) 373, 405
BstV1I GCAGC 2 cut(s) 348, 351
BstV2I GAAGAC 1 cut(s) 791
BsuRI GGCC 1 cut(s) 806
BtrI CACGTC 1 cut(s) 400
BtsCI GGATG 2 cut(s) 265, 428
BtsI GCAGTG 2 cut(s) 23, 441
BtsIMutI CAGTG 5 cut(s) 23, 183, 210, 441, 680
BveI ACCTGC 1 cut(s) 797
CaiI CAGNNNCTG 2 cut(s) 185, 833
CciI TCATGA 2 cut(s) 480, 658
Cfr10I RCCGGY 1 cut(s) 700
Cfr13I GGNCC 2 cut(s) 41, 403
Csp6I GTAC 2 cut(s) 89, 591
CspAI ACCGGT 1 cut(s) 700
CviAII CATG 7 cut(s) 29, 196, 341, 394, 481, 574, 659
CviQI GTAC 2 cut(s) 89, 591
DdeI CTNAG 2 cut(s) 186, 513
DpnI GATC 2 cut(s) 230, 540
DpnII GATC 2 cut(s) 228, 538
EaeI YGGCCR 1 cut(s) 804
Eam1104I CTCTTC 2 cut(s) 660, 744
EarI CTCTTC 2 cut(s) 660, 744
Ecl136II GAGCTC 1 cut(s) 98
Eco24I GRGCYC 2 cut(s) 100, 271
Eco31I GGTCTC 1 cut(s) 765
Eco47I GGWCC 2 cut(s) 41, 403
Eco53kI GAGCTC 1 cut(s) 98
Eco57I CTGAAG 1 cut(s) 810
Eco91I GGTNACC 1 cut(s) 685
EcoICRI GAGCTC 1 cut(s) 98
EcoO65I GGTNACC 1 cut(s) 685
EcoRII CCWGG 1 cut(s) 405
EcoT22I ATGCAT 1 cut(s) 197
EcoT38I GRGCYC 2 cut(s) 100, 271
FaeI CATG 7 cut(s) 32, 199, 344, 397, 484, 577, 662
FaqI GGGAC 1 cut(s) 221
FatI CATG 7 cut(s) 28, 195, 340, 393, 480, 573, 658
FauI CCCGC 1 cut(s) 79
FauNDI CATATG 1 cut(s) 735
FbaI TGATCA 1 cut(s) 538
FblI GTMKAC 1 cut(s) 757
Fnu4HI GCNGC 2 cut(s) 362, 365
FokI GGATG 2 cut(s) 272, 435
FriOI GRGCYC 2 cut(s) 100, 271
Fsp4HI GCNGC 2 cut(s) 362, 365
FspBI CTAG 2 cut(s) 588, 816
GluI GCNGC 2 cut(s) 362, 365
GsaI CCCAGC 1 cut(s) 837
HaeIII GGCC 1 cut(s) 806
HapII CCGG 2 cut(s) 375, 701
Hin1II CATG 7 cut(s) 32, 199, 344, 397, 484, 577, 662
HincII GTYRAC 1 cut(s) 48
HindII GTYRAC 1 cut(s) 48
HinfI GANTC 4 cut(s) 295, 448, 503, 754
HpaII CCGG 2 cut(s) 375, 701
Hpy166II GTNNAC 3 cut(s) 48, 403, 758
Hpy188I TCNGA 4 cut(s) 181, 447, 538, 829
Hpy188III TCNNGA 2 cut(s) 481, 659
Hpy8I GTNNAC 3 cut(s) 48, 403, 758
HpyAV CCTTC 2 cut(s) 625, 805
HpyCH4III ACNGT 3 cut(s) 45, 595, 691
HpyCH4IV ACGT 2 cut(s) 399, 495
HpyCH4V TGCA 7 cut(s) 28, 195, 263, 434, 639, 841, 861
HpyF10VI GCNNNNNNNGC 3 cut(s) 812, 821, 830
HpyF3I CTNAG 2 cut(s) 186, 513
HpySE526I ACGT 2 cut(s) 399, 495
Hsp92II CATG 7 cut(s) 32, 199, 344, 397, 484, 577, 662
Ksp22I TGATCA 1 cut(s) 538
Kzo9I GATC 2 cut(s) 228, 538
LmnI GCTCC 2 cut(s) 79, 103
Lsp1109I GCAGC 2 cut(s) 348, 351
LweI GCATC 2 cut(s) 250, 413
MaeI CTAG 2 cut(s) 588, 816
MaeII ACGT 2 cut(s) 399, 495
MaeIII GTNAC 2 cut(s) 5, 685
MalI GATC 2 cut(s) 230, 540
MbiI CCGCTC 1 cut(s) 74
MboI GATC 2 cut(s) 228, 538
MboII GAAGA 5 cut(s) 49, 328, 677, 761, 796
MhlI GDGCHC 2 cut(s) 100, 271
MlsI TGGCCA 1 cut(s) 806
MluCI AATT 4 cut(s) 53, 65, 640, 862
MluNI TGGCCA 1 cut(s) 806
MlyI GAGTC 2 cut(s) 512, 763
MmeI TCCRAC 1 cut(s) 748
MnlI CCTC 8 cut(s) 26, 87, 249, 274, 413, 613, 616, 655
Mox20I TGGCCA 1 cut(s) 806
Mph1103I ATGCAT 1 cut(s) 197
MscI TGGCCA 1 cut(s) 806
MseI TTAA 3 cut(s) 335, 527, 693
MslI CAYNNNNRTG 3 cut(s) 398, 578, 734
Msp20I TGGCCA 1 cut(s) 806
MspI CCGG 2 cut(s) 375, 701
MspR9I CCNGG 2 cut(s) 375, 407
Mva1269I GAATGC 2 cut(s) 558, 826
MvaI CCWGG 1 cut(s) 407
MwoI GCNNNNNNNGC 3 cut(s) 812, 821, 830
NciI CCSGG 1 cut(s) 375
NdeI CATATG 1 cut(s) 735
NdeII GATC 2 cut(s) 228, 538
NlaIII CATG 7 cut(s) 32, 199, 344, 397, 484, 577, 662
NsiI ATGCAT 1 cut(s) 197
NspI RCATGY 1 cut(s) 199
NspV TTCGAA 1 cut(s) 352
PagI TCATGA 2 cut(s) 480, 658
PctI GAATGC 2 cut(s) 558, 826
PfeI GAWTC 2 cut(s) 295, 448
PinAI ACCGGT 1 cut(s) 700
PkrI GCNGC 2 cut(s) 363, 366
PleI GAGTC 2 cut(s) 511, 762
PpsI GAGTC 2 cut(s) 511, 762
Psp124BI GAGCTC 1 cut(s) 100
Psp6I CCWGG 1 cut(s) 405
PspEI GGTNACC 1 cut(s) 685
PspFI CCCAGC 1 cut(s) 833
PspGI CCWGG 1 cut(s) 405
PspPI GGNCC 2 cut(s) 41, 403
PstNI CAGNNNCTG 2 cut(s) 185, 833
RsaI GTAC 2 cut(s) 90, 592
RsaNI GTAC 2 cut(s) 89, 591
RseI CAYNNNNRTG 3 cut(s) 398, 578, 734
SacI GAGCTC 1 cut(s) 100
SaqAI TTAA 3 cut(s) 335, 527, 693
SatI GCNGC 2 cut(s) 362, 365
Sau3AI GATC 2 cut(s) 228, 538
Sau96I GGNCC 2 cut(s) 41, 403
SchI GAGTC 2 cut(s) 512, 763
ScrFI CCNGG 2 cut(s) 375, 407
SduI GDGCHC 2 cut(s) 100, 271
SfaNI GCATC 2 cut(s) 250, 413
SfuI TTCGAA 1 cut(s) 352
SinI GGWCC 2 cut(s) 41, 403
SmiMI CAYNNNNRTG 3 cut(s) 398, 578, 734
SpeI ACTAGT 1 cut(s) 587
Sse9I AATT 4 cut(s) 53, 65, 640, 862
SsiI CCGC 1 cut(s) 72
SspMI CTAG 2 cut(s) 588, 816
SstI GAGCTC 1 cut(s) 100
StyD4I CCNGG 2 cut(s) 373, 405
TaaI ACNGT 3 cut(s) 45, 595, 691
TaiI ACGT 2 cut(s) 402, 498
TaqI TCGA 6 cut(s) 20, 206, 231, 330, 352, 451
TasI AATT 4 cut(s) 53, 65, 640, 862
TatI WGTACW 2 cut(s) 88, 590
TfiI GAWTC 2 cut(s) 295, 448
Tru1I TTAA 3 cut(s) 335, 527, 693
Tru9I TTAA 3 cut(s) 335, 527, 693
TscAI CASTG 5 cut(s) 30, 190, 217, 441, 687
TseI GCWGC 2 cut(s) 361, 364
TspDTI ATGAA 4 cut(s) 278, 469, 497, 762
TspGWI ACGGA 1 cut(s) 812
TspRI CASTG 5 cut(s) 30, 190, 217, 441, 687
VpaK11BI GGWCC 2 cut(s) 41, 403
XceI RCATGY 1 cut(s) 199
XmiI GTMKAC 1 cut(s) 757
XspI CTAG 2 cut(s) 588, 816
Zsp2I ATGCAT 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.