Integral membrane protein TerC family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Mem_trans | PF03547 | 27 - 419 | 9.6e-93 | Membrane transport protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 569 |
| AccI | GTMKAC | 1 cut(s) | 997 |
| AccIII | TCCGGA | 1 cut(s) | 562 |
| AciI | CCGC | 4 cut(s) | 327, 407, 957, 1232 |
| AcoI | YGGCCR | 2 cut(s) | 502, 1071 |
| AcsI | RAATTY | 2 cut(s) | 724, 1174 |
| AcuI | CTGAAG | 1 cut(s) | 714 |
| AcyI | GRCGYC | 1 cut(s) | 924 |
| AfaI | GTAC | 5 cut(s) | 64, 81, 375, 834, 1265 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 161, 562, 565, 566, 617, 829, 1049, 1248 |
| AflIII | ACRYGT | 1 cut(s) | 467 |
| AgsI | TTSAA | 3 cut(s) | 178, 361, 781 |
| AjnI | CCWGG | 1 cut(s) | 976 |
| AluBI | AGCT | 6 cut(s) | 172, 425, 784, 815, 906, 1081 |
| AluI | AGCT | 6 cut(s) | 172, 425, 784, 815, 906, 1081 |
| Alw26I | GTCTC | 2 cut(s) | 429, 617 |
| Ama87I | CYCGRG | 1 cut(s) | 257 |
| Aor13HI | TCCGGA | 1 cut(s) | 562 |
| AoxI | GGCC | 4 cut(s) | 502, 552, 973, 1071 |
| ApeKI | GCWGC | 5 cut(s) | 422, 906, 1010, 1199, 1202 |
| ApoI | RAATTY | 2 cut(s) | 724, 1174 |
| AspS9I | GGNCC | 4 cut(s) | 553, 881, 974, 1039 |
| AsuC2I | CCSGG | 1 cut(s) | 1046 |
| AsuHPI | GGTGA | 3 cut(s) | 467, 791, 1112 |
| AsuII | TTCGAA | 1 cut(s) | 870 |
| AvaI | CYCGRG | 1 cut(s) | 257 |
| AvaII | GGWCC | 2 cut(s) | 881, 1039 |
| BaeGI | GKGCMC | 1 cut(s) | 572 |
| BalI | TGGCCA | 1 cut(s) | 504 |
| BanI | GGYRCC | 1 cut(s) | 569 |
| BanII | GRGCYC | 2 cut(s) | 186, 611 |
| BbsI | GAAGAC | 3 cut(s) | 113, 663, 672 |
| BbvI | GCAGC | 5 cut(s) | 434, 893, 997, 1186, 1189 |
| BccI | CCATC | 7 cut(s) | 74, 341, 448, 578, 611, 872, 1091 |
| BciT130I | CCWGG | 1 cut(s) | 978 |
| BcnI | CCSGG | 1 cut(s) | 1046 |
| BcoDI | GTCTC | 2 cut(s) | 429, 617 |
| BfaI | CTAG | 2 cut(s) | 612, 824 |
| BglII | AGATCT | 1 cut(s) | 864 |
| BisI | GCNGC | 7 cut(s) | 407, 423, 907, 958, 1011, 1200, 1203 |
| BlsI | GCNGC | 7 cut(s) | 408, 424, 908, 959, 1012, 1201, 1204 |
| BmcAI | AGTACT | 1 cut(s) | 81 |
| Bme1390I | CCNGG | 2 cut(s) | 978, 1046 |
| Bme18I | GGWCC | 2 cut(s) | 881, 1039 |
| BmeT110I | CYCGRG | 1 cut(s) | 257 |
| BmgT120I | GGNCC | 4 cut(s) | 553, 881, 974, 1039 |
| BmiI | GGNNCC | 3 cut(s) | 555, 571, 1041 |
| BmrFI | CCNGG | 2 cut(s) | 978, 1046 |
| BmsI | GCATC | 1 cut(s) | 338 |
| BpiI | GAAGAC | 3 cut(s) | 113, 663, 672 |
| BpmI | CTGGAG | 1 cut(s) | 1115 |
| Bpu14I | TTCGAA | 1 cut(s) | 870 |
| BpuMI | CCSGG | 1 cut(s) | 1046 |
| BsaHI | GRCGYC | 1 cut(s) | 924 |
| BsaI | GGTCTC | 1 cut(s) | 429 |
| BsaJI | CCNNGG | 5 cut(s) | 828, 916, 976, 1044, 1242 |
| BsaWI | WCCGGW | 1 cut(s) | 562 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 161, 562, 565, 566, 617, 829, 1049, 1248 |
| Bse118I | RCCGGY | 1 cut(s) | 154 |
| Bse1I | ACTGG | 1 cut(s) | 505 |
| BseAI | TCCGGA | 1 cut(s) | 562 |
| BseBI | CCWGG | 1 cut(s) | 978 |
| BseDI | CCNNGG | 5 cut(s) | 828, 916, 976, 1044, 1242 |
| BseGI | GGATG | 3 cut(s) | 329, 440, 522 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 161, 562, 565, 566, 617, 829, 1049, 1248 |
| BseMII | CTCAG | 1 cut(s) | 73 |
| BseNI | ACTGG | 1 cut(s) | 505 |
| BseSI | GKGCMC | 1 cut(s) | 572 |
| BseXI | GCAGC | 5 cut(s) | 434, 893, 997, 1186, 1189 |
| BseYI | CCCAGC | 1 cut(s) | 1247 |
| BsgI | GTGCAG | 1 cut(s) | 892 |
| BshFI | GGCC | 4 cut(s) | 504, 554, 975, 1073 |
| BshNI | GGYRCC | 1 cut(s) | 569 |
| BsiHKCI | CYCGRG | 1 cut(s) | 257 |
| BsiSI | CCGG | 3 cut(s) | 155, 563, 1046 |
| BslFI | GGGAC | 3 cut(s) | 496, 935, 1025 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 161, 562, 565, 566, 617, 829, 1049, 1248 |
| BsmAI | GTCTC | 2 cut(s) | 429, 617 |
| BsmFI | GGGAC | 3 cut(s) | 496, 935, 1025 |
| BsmI | GAATGC | 1 cut(s) | 939 |
| BsnI | GGCC | 4 cut(s) | 504, 554, 975, 1073 |
| Bso31I | GGTCTC | 1 cut(s) | 429 |
| BsoBI | CYCGRG | 1 cut(s) | 257 |
| Bsp119I | TTCGAA | 1 cut(s) | 870 |
| Bsp1286I | GDGCHC | 3 cut(s) | 186, 572, 611 |
| Bsp13I | TCCGGA | 1 cut(s) | 562 |
| Bsp1407I | TGTACA | 1 cut(s) | 373 |
| Bsp143I | GATC | 2 cut(s) | 237, 864 |
| Bsp19I | CCATGG | 2 cut(s) | 828, 1242 |
| BspACI | CCGC | 4 cut(s) | 327, 407, 957, 1232 |
| BspANI | GGCC | 4 cut(s) | 504, 554, 975, 1073 |
| BspCNI | CTCAG | 1 cut(s) | 72 |
| BspEI | TCCGGA | 1 cut(s) | 562 |
| BspLI | GGNNCC | 3 cut(s) | 555, 571, 1041 |
| BspQI | GCTCTTC | 1 cut(s) | 678 |
| BspT104I | TTCGAA | 1 cut(s) | 870 |
| BspT107I | GGYRCC | 1 cut(s) | 569 |
| BspTNI | GGTCTC | 1 cut(s) | 429 |
| BsrFI | RCCGGY | 1 cut(s) | 154 |
| BsrGI | TGTACA | 1 cut(s) | 373 |
| BsrI | ACTGG | 1 cut(s) | 505 |
| BssAI | RCCGGY | 1 cut(s) | 154 |
| BssECI | CCNNGG | 5 cut(s) | 828, 916, 976, 1044, 1242 |
| BssMI | GATC | 2 cut(s) | 237, 864 |
| BssNI | GRCGYC | 1 cut(s) | 924 |
| BssT1I | CCWWGG | 3 cut(s) | 828, 916, 1242 |
| Bst2UI | CCWGG | 1 cut(s) | 978 |
| Bst4CI | ACNGT | 2 cut(s) | 106, 1029 |
| Bst6I | CTCTTC | 3 cut(s) | 672, 678, 1186 |
| BstACI | GRCGYC | 1 cut(s) | 924 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1141 |
| BstAUI | TGTACA | 1 cut(s) | 373 |
| BstBI | TTCGAA | 1 cut(s) | 870 |
| BstC8I | GCNNGC | 1 cut(s) | 156 |
| BstDEI | CTNAG | 1 cut(s) | 59 |
| BstDSI | CCRYGG | 2 cut(s) | 828, 1242 |
| BstF5I | GGATG | 3 cut(s) | 329, 440, 522 |
| BstKTI | GATC | 2 cut(s) | 240, 867 |
| BstMAI | GTCTC | 2 cut(s) | 429, 617 |
| BstMBI | GATC | 2 cut(s) | 237, 864 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 303, 1141 |
| BstNI | CCWGG | 1 cut(s) | 978 |
| BstNSI | RCATGY | 1 cut(s) | 471 |
| BstSCI | CCNGG | 2 cut(s) | 976, 1044 |
| BstSLI | GKGCMC | 1 cut(s) | 572 |
| BstV1I | GCAGC | 5 cut(s) | 434, 893, 997, 1186, 1189 |
| BstV2I | GAAGAC | 3 cut(s) | 113, 663, 672 |
| BstX2I | RGATCY | 1 cut(s) | 864 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 512 |
| BstYI | RGATCY | 1 cut(s) | 864 |
| BsuRI | GGCC | 4 cut(s) | 504, 554, 975, 1073 |
| BtgI | CCRYGG | 2 cut(s) | 828, 1242 |
| BtsCI | GGATG | 3 cut(s) | 329, 440, 522 |
| BtsI | GCAGTG | 1 cut(s) | 24 |
| BtsIMutI | CAGTG | 3 cut(s) | 24, 512, 897 |
| Cac8I | GCNNGC | 1 cut(s) | 156 |
| Cfr10I | RCCGGY | 1 cut(s) | 154 |
| Cfr13I | GGNCC | 4 cut(s) | 553, 881, 974, 1039 |
| CseI | GACGC | 1 cut(s) | 932 |
| Csp6I | GTAC | 5 cut(s) | 63, 80, 374, 833, 1264 |
| CviAII | CATG | 8 cut(s) | 207, 468, 653, 662, 829, 928, 936, 1243 |
| CviQI | GTAC | 5 cut(s) | 63, 80, 374, 833, 1264 |
| DdeI | CTNAG | 1 cut(s) | 59 |
| DpnI | GATC | 2 cut(s) | 239, 866 |
| DpnII | GATC | 2 cut(s) | 237, 864 |
| DraI | TTTAAA | 1 cut(s) | 855 |
| EaeI | YGGCCR | 2 cut(s) | 502, 1071 |
| Eam1104I | CTCTTC | 3 cut(s) | 672, 678, 1186 |
| EarI | CTCTTC | 3 cut(s) | 672, 678, 1186 |
| Eco130I | CCWWGG | 3 cut(s) | 828, 916, 1242 |
| Eco24I | GRGCYC | 2 cut(s) | 186, 611 |
| Eco31I | GGTCTC | 1 cut(s) | 429 |
| Eco47I | GGWCC | 2 cut(s) | 881, 1039 |
| Eco57I | CTGAAG | 1 cut(s) | 714 |
| Eco88I | CYCGRG | 1 cut(s) | 257 |
| EcoRII | CCWGG | 1 cut(s) | 976 |
| EcoT14I | CCWWGG | 3 cut(s) | 828, 916, 1242 |
| EcoT22I | ATGCAT | 1 cut(s) | 941 |
| EcoT38I | GRGCYC | 2 cut(s) | 186, 611 |
| ErhI | CCWWGG | 3 cut(s) | 828, 916, 1242 |
| FaeI | CATG | 8 cut(s) | 210, 471, 656, 665, 832, 931, 939, 1246 |
| FaqI | GGGAC | 3 cut(s) | 496, 935, 1025 |
| FatI | CATG | 8 cut(s) | 206, 467, 652, 661, 828, 927, 935, 1242 |
| FauNDI | CATATG | 1 cut(s) | 535 |
| FblI | GTMKAC | 1 cut(s) | 997 |
| Fnu4HI | GCNGC | 7 cut(s) | 407, 423, 907, 958, 1011, 1200, 1203 |
| FokI | GGATG | 3 cut(s) | 316, 427, 509 |
| FriOI | GRGCYC | 2 cut(s) | 186, 611 |
| Fsp4HI | GCNGC | 7 cut(s) | 407, 423, 907, 958, 1011, 1200, 1203 |
| FspBI | CTAG | 2 cut(s) | 612, 824 |
| GluI | GCNGC | 7 cut(s) | 407, 423, 907, 958, 1011, 1200, 1203 |
| GsaI | CCCAGC | 1 cut(s) | 1251 |
| GsuI | CTGGAG | 1 cut(s) | 1115 |
| HaeIII | GGCC | 4 cut(s) | 504, 554, 975, 1073 |
| HapII | CCGG | 3 cut(s) | 155, 563, 1046 |
| HgaI | GACGC | 1 cut(s) | 932 |
| Hin1I | GRCGYC | 1 cut(s) | 924 |
| Hin1II | CATG | 8 cut(s) | 210, 471, 656, 665, 832, 931, 939, 1246 |
| HincII | GTYRAC | 2 cut(s) | 145, 718 |
| HindII | GTYRAC | 2 cut(s) | 145, 718 |
| HinfI | GANTC | 4 cut(s) | 34, 458, 872, 931 |
| HpaI | GTTAAC | 1 cut(s) | 145 |
| HpaII | CCGG | 3 cut(s) | 155, 563, 1046 |
| HphI | GGTGA | 3 cut(s) | 467, 791, 1112 |
| Hpy166II | GTNNAC | 5 cut(s) | 145, 344, 366, 718, 998 |
| Hpy188I | TCNGA | 5 cut(s) | 44, 230, 417, 733, 877 |
| Hpy188III | TCNNGA | 4 cut(s) | 70, 175, 563, 604 |
| Hpy8I | GTNNAC | 5 cut(s) | 145, 344, 366, 718, 998 |
| HpyAV | CCTTC | 1 cut(s) | 159 |
| HpyCH4III | ACNGT | 2 cut(s) | 106, 1029 |
| HpyCH4V | TGCA | 6 cut(s) | 77, 422, 518, 909, 939, 1172 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 303, 1141 |
| HpyF3I | CTNAG | 1 cut(s) | 59 |
| Hsp92I | GRCGYC | 1 cut(s) | 924 |
| Hsp92II | CATG | 8 cut(s) | 210, 471, 656, 665, 832, 931, 939, 1246 |
| Kpn2I | TCCGGA | 1 cut(s) | 562 |
| KroI | GCCGGC | 1 cut(s) | 154 |
| KroNI | GCCGGC | 1 cut(s) | 156 |
| KspAI | GTTAAC | 1 cut(s) | 145 |
| Kzo9I | GATC | 2 cut(s) | 237, 864 |
| LguI | GCTCTTC | 1 cut(s) | 678 |
| LmnI | GCTCC | 2 cut(s) | 839, 1134 |
| Lsp1109I | GCAGC | 5 cut(s) | 434, 893, 997, 1186, 1189 |
| LweI | GCATC | 1 cut(s) | 338 |
| MaeI | CTAG | 2 cut(s) | 612, 824 |
| MaeIII | GTNAC | 3 cut(s) | 54, 455, 1063 |
| MalI | GATC | 2 cut(s) | 239, 866 |
| MboI | GATC | 2 cut(s) | 237, 864 |
| MfeI | CAATTG | 1 cut(s) | 369 |
| MflI | RGATCY | 1 cut(s) | 864 |
| MhlI | GDGCHC | 3 cut(s) | 186, 572, 611 |
| MlsI | TGGCCA | 1 cut(s) | 504 |
| MluCI | AATT | 7 cut(s) | 369, 378, 384, 724, 752, 776, 1174 |
| MluNI | TGGCCA | 1 cut(s) | 504 |
| MlyI | GAGTC | 1 cut(s) | 452 |
| MmeI | TCCRAC | 2 cut(s) | 22, 468 |
| MnlI | CCTC | 8 cut(s) | 38, 559, 570, 673, 1100, 1175, 1189, 1277 |
| Mox20I | TGGCCA | 1 cut(s) | 504 |
| Mph1103I | ATGCAT | 1 cut(s) | 941 |
| MroI | TCCGGA | 1 cut(s) | 562 |
| MroNI | GCCGGC | 1 cut(s) | 154 |
| MscI | TGGCCA | 1 cut(s) | 504 |
| MseI | TTAA | 4 cut(s) | 144, 543, 854, 1178 |
| Msp20I | TGGCCA | 1 cut(s) | 504 |
| MspA1I | CMGCKG | 1 cut(s) | 906 |
| MspI | CCGG | 3 cut(s) | 155, 563, 1046 |
| MspR9I | CCNGG | 2 cut(s) | 978, 1046 |
| MunI | CAATTG | 1 cut(s) | 369 |
| Mva1269I | GAATGC | 1 cut(s) | 939 |
| MvaI | CCWGG | 1 cut(s) | 978 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 303, 1141 |
| NaeI | GCCGGC | 1 cut(s) | 156 |
| NciI | CCSGG | 1 cut(s) | 1046 |
| NcoI | CCATGG | 2 cut(s) | 828, 1242 |
| NdeI | CATATG | 1 cut(s) | 535 |
| NdeII | GATC | 2 cut(s) | 237, 864 |
| NgoMIV | GCCGGC | 1 cut(s) | 154 |
| NlaIII | CATG | 8 cut(s) | 210, 471, 656, 665, 832, 931, 939, 1246 |
| NlaIV | GGNNCC | 3 cut(s) | 555, 571, 1041 |
| NmuCI | GTSAC | 1 cut(s) | 455 |
| NsiI | ATGCAT | 1 cut(s) | 941 |
| NspI | RCATGY | 1 cut(s) | 471 |
| NspV | TTCGAA | 1 cut(s) | 870 |
| PaeR7I | CTCGAG | 1 cut(s) | 257 |
| PciI | ACATGT | 1 cut(s) | 467 |
| PciSI | GCTCTTC | 1 cut(s) | 678 |
| PctI | GAATGC | 1 cut(s) | 939 |
| PdiI | GCCGGC | 1 cut(s) | 156 |
| PfeI | GAWTC | 3 cut(s) | 34, 872, 931 |
| PkrI | GCNGC | 7 cut(s) | 408, 424, 908, 959, 1012, 1201, 1204 |
| PleI | GAGTC | 1 cut(s) | 452 |
| PpsI | GAGTC | 1 cut(s) | 452 |
| PscI | ACATGT | 1 cut(s) | 467 |
| Psp6I | CCWGG | 1 cut(s) | 976 |
| PspFI | CCCAGC | 1 cut(s) | 1247 |
| PspGI | CCWGG | 1 cut(s) | 976 |
| PspN4I | GGNNCC | 3 cut(s) | 555, 571, 1041 |
| PspPI | GGNCC | 4 cut(s) | 553, 881, 974, 1039 |
| PspXI | VCTCGAGB | 1 cut(s) | 257 |
| PsuI | RGATCY | 1 cut(s) | 864 |
| PvuII | CAGCTG | 1 cut(s) | 906 |
| RsaI | GTAC | 5 cut(s) | 64, 81, 375, 834, 1265 |
| RsaNI | GTAC | 5 cut(s) | 63, 80, 374, 833, 1264 |
| SapI | GCTCTTC | 1 cut(s) | 678 |
| SaqAI | TTAA | 4 cut(s) | 144, 543, 854, 1178 |
| SatI | GCNGC | 7 cut(s) | 407, 423, 907, 958, 1011, 1200, 1203 |
| Sau3AI | GATC | 2 cut(s) | 237, 864 |
| Sau96I | GGNCC | 4 cut(s) | 553, 881, 974, 1039 |
| ScaI | AGTACT | 1 cut(s) | 81 |
| SchI | GAGTC | 1 cut(s) | 452 |
| ScrFI | CCNGG | 2 cut(s) | 978, 1046 |
| SduI | GDGCHC | 3 cut(s) | 186, 572, 611 |
| SfaNI | GCATC | 1 cut(s) | 338 |
| Sfr274I | CTCGAG | 1 cut(s) | 257 |
| SfuI | TTCGAA | 1 cut(s) | 870 |
| SinI | GGWCC | 2 cut(s) | 881, 1039 |
| SlaI | CTCGAG | 1 cut(s) | 257 |
| SmlI | CTYRAG | 1 cut(s) | 257 |
| SmoI | CTYRAG | 1 cut(s) | 257 |
| Sse9I | AATT | 7 cut(s) | 369, 378, 384, 724, 752, 776, 1174 |
| SsiI | CCGC | 4 cut(s) | 327, 407, 957, 1232 |
| SspMI | CTAG | 2 cut(s) | 612, 824 |
| StyD4I | CCNGG | 2 cut(s) | 976, 1044 |
| StyI | CCWWGG | 3 cut(s) | 828, 916, 1242 |
| TaaI | ACNGT | 2 cut(s) | 106, 1029 |
| TaqI | TCGA | 2 cut(s) | 258, 870 |
| TasI | AATT | 7 cut(s) | 369, 378, 384, 724, 752, 776, 1174 |
| TatI | WGTACW | 2 cut(s) | 79, 373 |
| TauI | GCSGC | 2 cut(s) | 409, 960 |
| TfiI | GAWTC | 3 cut(s) | 34, 872, 931 |
| Tru1I | TTAA | 4 cut(s) | 144, 543, 854, 1178 |
| Tru9I | TTAA | 4 cut(s) | 144, 543, 854, 1178 |
| TscAI | CASTG | 3 cut(s) | 24, 512, 904 |
| TseFI | GTSAC | 1 cut(s) | 455 |
| TseI | GCWGC | 5 cut(s) | 422, 906, 1010, 1199, 1202 |
| Tsp45I | GTSAC | 1 cut(s) | 455 |
| TspDTI | ATGAA | 3 cut(s) | 669, 678, 1211 |
| TspGWI | ACGGA | 1 cut(s) | 329 |
| TspRI | CASTG | 3 cut(s) | 24, 512, 904 |
| VpaK11BI | GGWCC | 2 cut(s) | 881, 1039 |
| XapI | RAATTY | 2 cut(s) | 724, 1174 |
| XceI | RCATGY | 1 cut(s) | 471 |
| XhoI | CTCGAG | 1 cut(s) | 257 |
| XmiI | GTMKAC | 1 cut(s) | 997 |
| XspI | CTAG | 2 cut(s) | 612, 824 |
| ZrmI | AGTACT | 1 cut(s) | 81 |
| Zsp2I | ATGCAT | 1 cut(s) | 941 |