Rorug02G0148400

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000082
Physical Location & Seq
Reverse (-)
13001252 .. 13003324
2073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0148400.1

Sequence Viewer

Length: 1584 bp
ATGCAGTCTGAAACACACATAGACATGAATGCCCAGAATAGAATAAGCACTATTGCTGGGTCTTCACTGGAGATGGAGATGAAGGGTAGTGCAGAAAATACCACGACATATAAGTTCAACAAGAATGCTTTTGCTTGCGCTGTGTTTGCCTCTGTAATATCCATCATATTTGGATACGACACCGCTGTAATGAGTGGAGCAATGATCTTCATGAAAGAAGATCTCAAAATCAGTGATGTACAAGTCGGAGTCCTCGCCGGGATATTAAACCTATGCGCCCTAGTCGGGTCCTTAGCGGCCGGAAGAACCTCCGATTACATTGGTCGTCGTTACACCATATTCCTATCCTCCATAATTTTCTTGGTGGGGGCAATTCTAATGGGCTACGGGCCAAACTACGCGGTCCTAATGATCGGTAGGTGCACCTCTGGCATAGGTGTGGGCTTTGCACTCATGATCGCCCCGGTTTATGCAGCAGAGATCTCATCCCCTACATCGCGGGGTACACTAACCTCTCTACCGGAGCTTTGCATCAGTCTCGGGCTCTTATTCGGATACGTATCAAATTACCTTTTTGGGAAACTGGCTTTGAAACTTGGCTGGAGATTGATGCTTGGGGTTGCTGGAGTCCCAGCAATTGCTTTGACTATTGGGATTCTCAAAATGCCAGAGTCCCCAAGGTGGTTAGTGATGCAAGGTCGTTTAGGGGAGGCTAAGAAAGTGTTGGAACTGGTTTCTAATACCAAACAAGAAGCTCAAGTTCGTTTTCGTGACATCAAAATTGCGATTGGTATTGACGAAAATACCGATGATGATGTCGTGAAGCATAGAACTAACAATCGAGGAGAAGGGGTGTGGAAAGAATTATTCCTGAGGCCGAGTCCTGCTGTCCGGAGGATTTTGCTAGCGGCAATCGGAATACATTTCTTCGAACATGCAACAGGAATAGAATCCGTGATTTTGTTTAGTCCGAGAATTTTCAAGAAAGCTGGGGTTACTAGCAAAGACACGCTCTTGCTTGCCACAATCGGGATTGGGGTTACAAAGATTGTGTTTATATTGCTGGCAACATTTCTGATTGACAAGGTTGGTAGGAGGAAGTTATTGTTGACGAGCACTGCGGGGATGATTATATCTCTCGCAGGATTAGGGTTTGGATTGACCATGGCAGAGAACTCCAAAAAGGAGCTTGCTTGGGCTCTAAGTTTCAGCATTGTGGCAGTGTATGTATTTGTGGCTTTCTTCTCTATTGGACTTGGGCCAATTACATGGGTTTACAGCACTGAGATTTTCCCTTTGAAGTTGAGGGCACAAGGGACTAGTGTTGTGGTAGCTGTGAACAGAGTTATAAATGCTGCTGTTTCAATGAGTTTCATTCCAATATATAAGGCAATTACAATAGGAGGGACCTTCTTTATGTTTGCAGGGATATCTGTGTCGGCTTGGGTTTTCTTCTTTTTGTTCTTACCAGAGACTAAAGGAAGGTCTTTGGAAGAGATGGAAATGCTCTTCAGCAATTATAGGACTACTGGTGCTGATCAATCTAGAAACAGTGTTGGAGTGCAATCTAGAAGTGATGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

527

Amino Acids

57.14

Weight (kDa)

9.49

Isoelectric Point (pI)

32.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 47 - 504 1.5e-109 Sugar (and other) transporter
MFS_1 PF07690 52 - 337 4e-24 Major Facilitator Superfamily
MFS_1 PF07690 333 - 495 2.3e-07 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1349
AccII CGCG 2 cut(s) 401, 499
AccIII TCCGGA 1 cut(s) 891
AciI CCGC 6 cut(s) 183, 296, 401, 499, 908, 1121
AcoI YGGCCR 1 cut(s) 297
AcsI RAATTY 1 cut(s) 975
AcuI CTGAAG 1 cut(s) 1495
AfaI GTAC 2 cut(s) 240, 505
AfiI CCNNNNNNNGG 3 cut(s) 285, 681, 1029
AgsI TTSAA 5 cut(s) 118, 592, 982, 1300, 1365
AhlI ACTAGT 1 cut(s) 1319
AluBI AGCT 5 cut(s) 526, 755, 989, 1189, 1334
AluI AGCT 5 cut(s) 526, 755, 989, 1189, 1334
Alw21I GWGCWC 2 cut(s) 425, 1118
Alw26I GTCTC 2 cut(s) 542, 1466
Alw44I GTGCAC 1 cut(s) 421
Ama87I CYCGRG 1 cut(s) 539
Aor13HI TCCGGA 1 cut(s) 891
AoxI GGCC 4 cut(s) 297, 389, 875, 1259
ApaLI GTGCAC 1 cut(s) 421
ApeKI GCWGC 2 cut(s) 473, 1355
ApoI RAATTY 1 cut(s) 975
AspLEI GCGC 2 cut(s) 140, 278
AspS9I GGNCC 5 cut(s) 288, 389, 403, 1259, 1407
AsuC2I CCSGG 2 cut(s) 259, 464
AsuII TTCGAA 1 cut(s) 930
AsuNHI GCTAGC 1 cut(s) 904
AvaI CYCGRG 1 cut(s) 539
AvaII GGWCC 3 cut(s) 288, 403, 1407
AxyI CCTNAGG 1 cut(s) 872
BaeGI GKGCMC 2 cut(s) 425, 1312
BanII GRGCYC 2 cut(s) 546, 1201
BbsI GAAGAC 1 cut(s) 54
Bbv12I GWGCWC 2 cut(s) 425, 1118
BbvI GCAGC 2 cut(s) 485, 1342
BccI CCATC 3 cut(s) 67, 170, 1492
BcgI CGANNNNNNTGC 2 cut(s) 520, 554
BciVI GTATCC 2 cut(s) 167, 548
BclI TGATCA 1 cut(s) 1537
BcnI CCSGG 2 cut(s) 259, 464
BcoDI GTCTC 2 cut(s) 542, 1466
BcuI ACTAGT 1 cut(s) 1319
BfaI CTAG 7 cut(s) 281, 905, 999, 1320, 1545, 1569, 1582
BfuI GTATCC 2 cut(s) 167, 548
BglII AGATCT 2 cut(s) 220, 480
BisI GCNGC 4 cut(s) 297, 474, 909, 1356
BlsI GCNGC 4 cut(s) 298, 475, 910, 1357
Bme1390I CCNGG 2 cut(s) 259, 464
Bme18I GGWCC 3 cut(s) 288, 403, 1407
BmeT110I CYCGRG 1 cut(s) 539
BmgT120I GGNCC 5 cut(s) 288, 389, 403, 1259, 1407
BmiI GGNNCC 2 cut(s) 289, 1408
BmrFI CCNGG 2 cut(s) 259, 464
BmsI GCATC 4 cut(s) 540, 600, 681, 1567
BmtI GCTAGC 1 cut(s) 908
BpiI GAAGAC 1 cut(s) 54
BpmI CTGGAG 3 cut(s) 89, 622, 645
Bpu10I CCTNAGC 1 cut(s) 292
Bpu14I TTCGAA 1 cut(s) 930
BpuEI CTTGAG 1 cut(s) 741
BpuMI CCSGG 2 cut(s) 259, 464
BsaAI YACGTR 1 cut(s) 559
BsaBI GATNNNNATC 1 cut(s) 559
BsaJI CCNNGG 3 cut(s) 462, 677, 1164
BsaWI WCCGGW 2 cut(s) 520, 891
BsaXI ACNNNNNCTCC 2 cut(s) 837, 867
Bsc4I CCNNNNNNNGG 3 cut(s) 285, 681, 1029
Bse1I ACTGG 4 cut(s) 72, 588, 735, 1534
Bse21I CCTNAGG 1 cut(s) 872
Bse3DI GCAATG 1 cut(s) 207
Bse8I GATNNNNATC 1 cut(s) 559
BseAI TCCGGA 1 cut(s) 891
BseDI CCNNGG 3 cut(s) 462, 677, 1164
BseGI GGATG 2 cut(s) 485, 1131
BseJI GATNNNNATC 1 cut(s) 559
BseLI CCNNNNNNNGG 3 cut(s) 285, 681, 1029
BseMI GCAATG 1 cut(s) 207
BseMII CTCAG 2 cut(s) 863, 1275
BseNI ACTGG 4 cut(s) 72, 588, 735, 1534
BseRI GAGGAG 1 cut(s) 858
BseSI GKGCMC 2 cut(s) 425, 1312
BseX3I CGGCCG 1 cut(s) 297
BseXI GCAGC 2 cut(s) 485, 1342
BseYI CCCAGC 3 cut(s) 56, 631, 989
BsgI GTGCAG 1 cut(s) 111
Bsh1236I CGCG 2 cut(s) 401, 499
Bsh1285I CGRYCG 1 cut(s) 300
BshFI GGCC 4 cut(s) 299, 391, 877, 1261
BsiEI CGRYCG 1 cut(s) 300
BsiHKAI GWGCWC 2 cut(s) 425, 1118
BsiHKCI CYCGRG 1 cut(s) 539
BsiSI CCGG 5 cut(s) 258, 300, 464, 521, 892
BslFI GGGAC 4 cut(s) 614, 658, 1330, 1420
BslI CCNNNNNNNGG 3 cut(s) 285, 681, 1029
BsmAI GTCTC 2 cut(s) 542, 1466
BsmFI GGGAC 4 cut(s) 614, 658, 1330, 1420
BsmI GAATGC 2 cut(s) 34, 130
BsnI GGCC 4 cut(s) 299, 391, 877, 1261
BsoBI CYCGRG 1 cut(s) 539
Bsp119I TTCGAA 1 cut(s) 930
Bsp1286I GDGCHC 5 cut(s) 425, 546, 1118, 1201, 1312
Bsp13I TCCGGA 1 cut(s) 891
Bsp1407I TGTACA 1 cut(s) 238
Bsp143I GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
Bsp19I CCATGG 1 cut(s) 1164
BspACI CCGC 6 cut(s) 183, 296, 401, 499, 908, 1121
BspANI GGCC 4 cut(s) 299, 391, 877, 1261
BspCNI CTCAG 2 cut(s) 864, 1276
BspEI TCCGGA 1 cut(s) 891
BspFNI CGCG 2 cut(s) 401, 499
BspHI TCATGA 2 cut(s) 210, 453
BspLI GGNNCC 2 cut(s) 289, 1408
BspOI GCTAGC 1 cut(s) 908
BspQI GCTCTTC 1 cut(s) 1514
BspT104I TTCGAA 1 cut(s) 930
BsrDI GCAATG 1 cut(s) 207
BsrGI TGTACA 1 cut(s) 238
BsrI ACTGG 4 cut(s) 72, 588, 735, 1534
BssECI CCNNGG 3 cut(s) 462, 677, 1164
BssMI GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
BssT1I CCWWGG 2 cut(s) 677, 1164
Bst4CI ACNGT 1 cut(s) 1553
Bst6I CTCTTC 2 cut(s) 1488, 1514
BstAUI TGTACA 1 cut(s) 238
BstBAI YACGTR 1 cut(s) 559
BstBI TTCGAA 1 cut(s) 930
BstC8I GCNNGC 5 cut(s) 136, 906, 1020, 1065, 1191
BstDEI CTNAG 5 cut(s) 292, 714, 872, 1202, 1284
BstDSI CCRYGG 1 cut(s) 1164
BstF5I GGATG 2 cut(s) 485, 1131
BstFNI CGCG 2 cut(s) 401, 499
BstHHI GCGC 2 cut(s) 140, 278
BstKTI GATC 6 cut(s) 207, 223, 414, 459, 483, 1540
BstMAI GTCTC 2 cut(s) 542, 1466
BstMBI GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
BstMCI CGRYCG 1 cut(s) 300
BstMWI GCNNNNNNNGC 2 cut(s) 146, 429
BstNSI RCATGY 1 cut(s) 938
BstSCI CCNGG 2 cut(s) 257, 462
BstSLI GKGCMC 2 cut(s) 425, 1312
BstSNI TACGTA 1 cut(s) 559
BstUI CGCG 2 cut(s) 401, 499
BstV1I GCAGC 2 cut(s) 485, 1342
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 2 cut(s) 220, 480
BstXI CCANNNNNNTGG 1 cut(s) 1269
BstYI RGATCY 2 cut(s) 220, 480
BstZI CGGCCG 1 cut(s) 297
Bsu36I CCTNAGG 1 cut(s) 872
BsuI GTATCC 2 cut(s) 167, 548
BsuRI GGCC 4 cut(s) 299, 391, 877, 1261
BtgI CCRYGG 1 cut(s) 1164
BtgZI GCGATG 1 cut(s) 480
BtsCI GGATG 2 cut(s) 485, 1131
BtsI GCAGTG 2 cut(s) 1116, 1227
BtsIMutI CAGTG 6 cut(s) 65, 238, 1116, 1227, 1281, 1558
Cac8I GCNNGC 5 cut(s) 136, 906, 1020, 1065, 1191
CciI TCATGA 2 cut(s) 210, 453
CfoI GCGC 2 cut(s) 140, 278
Cfr13I GGNCC 5 cut(s) 288, 389, 403, 1259, 1407
Csp6I GTAC 2 cut(s) 239, 504
CviAII CATG 6 cut(s) 25, 211, 454, 935, 1165, 1269
CviQI GTAC 2 cut(s) 239, 504
DdeI CTNAG 5 cut(s) 292, 714, 872, 1202, 1284
DpnI GATC 6 cut(s) 206, 222, 413, 458, 482, 1539
DpnII GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
EaeI YGGCCR 1 cut(s) 297
EagI CGGCCG 1 cut(s) 297
Eam1104I CTCTTC 2 cut(s) 1488, 1514
EarI CTCTTC 2 cut(s) 1488, 1514
EclXI CGGCCG 1 cut(s) 297
Eco105I TACGTA 1 cut(s) 559
Eco130I CCWWGG 2 cut(s) 677, 1164
Eco24I GRGCYC 2 cut(s) 546, 1201
Eco32I GATATC 1 cut(s) 1431
Eco47I GGWCC 3 cut(s) 288, 403, 1407
Eco52I CGGCCG 1 cut(s) 297
Eco57I CTGAAG 1 cut(s) 1495
Eco81I CCTNAGG 1 cut(s) 872
Eco88I CYCGRG 1 cut(s) 539
EcoO109I RGGNCCY 2 cut(s) 288, 1407
EcoRV GATATC 1 cut(s) 1431
EcoT14I CCWWGG 2 cut(s) 677, 1164
EcoT38I GRGCYC 2 cut(s) 546, 1201
ErhI CCWWGG 2 cut(s) 677, 1164
FaeI CATG 6 cut(s) 28, 214, 457, 938, 1168, 1272
FaqI GGGAC 4 cut(s) 614, 658, 1330, 1420
FatI CATG 6 cut(s) 24, 210, 453, 934, 1164, 1268
FauI CCCGC 2 cut(s) 492, 1114
FbaI TGATCA 1 cut(s) 1537
Fnu4HI GCNGC 4 cut(s) 297, 474, 909, 1356
FokI GGATG 2 cut(s) 472, 1138
FriOI GRGCYC 2 cut(s) 546, 1201
Fsp4HI GCNGC 4 cut(s) 297, 474, 909, 1356
FspBI CTAG 7 cut(s) 281, 905, 999, 1320, 1545, 1569, 1582
GlaI GCGC 2 cut(s) 139, 277
GluI GCNGC 4 cut(s) 297, 474, 909, 1356
GsaI CCCAGC 3 cut(s) 60, 635, 993
GsuI CTGGAG 3 cut(s) 89, 622, 645
HaeIII GGCC 4 cut(s) 299, 391, 877, 1261
HapII CCGG 5 cut(s) 258, 300, 464, 521, 892
HhaI GCGC 2 cut(s) 140, 278
Hin1II CATG 6 cut(s) 28, 214, 457, 938, 1168, 1272
Hin6I GCGC 2 cut(s) 138, 276
HinP1I GCGC 2 cut(s) 138, 276
HincII GTYRAC 1 cut(s) 1110
HindII GTYRAC 1 cut(s) 1110
HinfI GANTC 6 cut(s) 249, 627, 655, 671, 880, 950
HpaII CCGG 5 cut(s) 258, 300, 464, 521, 892
Hpy166II GTNNAC 5 cut(s) 423, 506, 1110, 1276, 1339
Hpy188I TCNGA 7 cut(s) 10, 248, 313, 554, 917, 972, 1077
Hpy8I GTNNAC 5 cut(s) 423, 506, 1110, 1276, 1339
Hpy99I CGWCG 1 cut(s) 330
HpyAV CCTTC 4 cut(s) 76, 842, 1420, 1476
HpyCH4III ACNGT 1 cut(s) 1553
HpyCH4IV ACGT 1 cut(s) 558
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 429
HpyF3I CTNAG 5 cut(s) 292, 714, 872, 1202, 1284
HpySE526I ACGT 1 cut(s) 558
Hsp92II CATG 6 cut(s) 28, 214, 457, 938, 1168, 1272
HspAI GCGC 2 cut(s) 138, 276
Kpn2I TCCGGA 1 cut(s) 891
Ksp22I TGATCA 1 cut(s) 1537
Kzo9I GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
LguI GCTCTTC 1 cut(s) 1514
LmnI GCTCC 3 cut(s) 197, 523, 1186
Lsp1109I GCAGC 2 cut(s) 485, 1342
LweI GCATC 4 cut(s) 540, 600, 681, 1567
MaeI CTAG 7 cut(s) 281, 905, 999, 1320, 1545, 1569, 1582
MaeII ACGT 1 cut(s) 558
MaeIII GTNAC 4 cut(s) 329, 770, 994, 1039
MalI GATC 6 cut(s) 206, 222, 413, 458, 482, 1539
MboI GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
MboII GAAGA 9 cut(s) 54, 199, 230, 315, 919, 1234, 1444, 1501, 1505
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 2 cut(s) 220, 480
MhlI GDGCHC 5 cut(s) 425, 546, 1118, 1201, 1312
MlyI GAGTC 4 cut(s) 258, 636, 680, 889
MmeI TCCRAC 3 cut(s) 226, 705, 1537
MroI TCCGGA 1 cut(s) 891
MseI TTAA 1 cut(s) 266
MslI CAYNNNNRTG 2 cut(s) 23, 437
MspA1I CMGCKG 1 cut(s) 185
MspI CCGG 5 cut(s) 258, 300, 464, 521, 892
MspR9I CCNGG 2 cut(s) 259, 464
MunI CAATTG 1 cut(s) 636
Mva1269I GAATGC 2 cut(s) 34, 130
MvnI CGCG 2 cut(s) 401, 499
MwoI GCNNNNNNNGC 2 cut(s) 146, 429
NciI CCSGG 2 cut(s) 259, 464
NcoI CCATGG 1 cut(s) 1164
NdeII GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
NheI GCTAGC 1 cut(s) 904
NlaIII CATG 6 cut(s) 28, 214, 457, 938, 1168, 1272
NlaIV GGNNCC 2 cut(s) 289, 1408
NmeAIII GCCGAG 1 cut(s) 903
NmuCI GTSAC 1 cut(s) 770
NspI RCATGY 1 cut(s) 938
NspV TTCGAA 1 cut(s) 930
PagI TCATGA 2 cut(s) 210, 453
PciSI GCTCTTC 1 cut(s) 1514
PcsI WCGNNNNNNNCGW 1 cut(s) 804
PctI GAATGC 2 cut(s) 34, 130
PfeI GAWTC 2 cut(s) 655, 950
PkrI GCNGC 4 cut(s) 298, 475, 910, 1357
PleI GAGTC 4 cut(s) 257, 635, 679, 888
PpsI GAGTC 4 cut(s) 257, 635, 679, 888
Ppu21I YACGTR 1 cut(s) 559
PpuMI RGGWCCY 2 cut(s) 288, 1407
PsiI TTATAA 1 cut(s) 1349
Psp5II RGGWCCY 2 cut(s) 288, 1407
PspFI CCCAGC 3 cut(s) 56, 631, 989
PspN4I GGNNCC 2 cut(s) 289, 1408
PspPI GGNCC 5 cut(s) 288, 389, 403, 1259, 1407
PspPPI RGGWCCY 2 cut(s) 288, 1407
PsuI RGATCY 2 cut(s) 220, 480
RsaI GTAC 2 cut(s) 240, 505
RsaNI GTAC 2 cut(s) 239, 504
RseI CAYNNNNRTG 2 cut(s) 23, 437
SapI GCTCTTC 1 cut(s) 1514
SaqAI TTAA 1 cut(s) 266
SatI GCNGC 4 cut(s) 297, 474, 909, 1356
Sau3AI GATC 6 cut(s) 204, 220, 411, 456, 480, 1537
Sau96I GGNCC 5 cut(s) 288, 389, 403, 1259, 1407
SchI GAGTC 4 cut(s) 258, 636, 680, 889
ScrFI CCNGG 2 cut(s) 259, 464
SduI GDGCHC 5 cut(s) 425, 546, 1118, 1201, 1312
SfaNI GCATC 4 cut(s) 540, 600, 681, 1567
SfuI TTCGAA 1 cut(s) 930
SinI GGWCC 3 cut(s) 288, 403, 1407
SmiMI CAYNNNNRTG 2 cut(s) 23, 437
SmlI CTYRAG 1 cut(s) 756
SmoI CTYRAG 1 cut(s) 756
SnaBI TACGTA 1 cut(s) 559
SpeI ACTAGT 1 cut(s) 1319
SsiI CCGC 6 cut(s) 183, 296, 401, 499, 908, 1121
SspMI CTAG 7 cut(s) 281, 905, 999, 1320, 1545, 1569, 1582
StyD4I CCNGG 2 cut(s) 257, 462
StyI CCWWGG 2 cut(s) 677, 1164
TaaI ACNGT 1 cut(s) 1553
TaiI ACGT 1 cut(s) 561
TaqI TCGA 2 cut(s) 841, 930
TatI WGTACW 1 cut(s) 238
TauI GCSGC 2 cut(s) 299, 911
TfiI GAWTC 2 cut(s) 655, 950
Tru1I TTAA 1 cut(s) 266
Tru9I TTAA 1 cut(s) 266
TscAI CASTG 6 cut(s) 72, 238, 1123, 1227, 1288, 1558
TseFI GTSAC 1 cut(s) 770
TseI GCWGC 2 cut(s) 473, 1355
Tsp45I GTSAC 1 cut(s) 770
TspDTI ATGAA 5 cut(s) 41, 95, 199, 227, 1363
TspGWI ACGGA 1 cut(s) 943
TspRI CASTG 6 cut(s) 72, 238, 1123, 1227, 1288, 1558
VneI GTGCAC 1 cut(s) 421
VpaK11BI GGWCC 3 cut(s) 288, 403, 1407
XapI RAATTY 1 cut(s) 975
XbaI TCTAGA 2 cut(s) 1544, 1568
XceI RCATGY 1 cut(s) 938
XcmI CCANNNNNNNNNTGG 1 cut(s) 358
XspI CTAG 7 cut(s) 281, 905, 999, 1320, 1545, 1569, 1582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.