Rroxscaffold_2G00135860

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000082
Physical Location & Seq
Forward (+)
73371158 .. 73372299
1142 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00135860.1

Sequence Viewer

Length: 1032 bp
ATGGCGGAAACAGAAGACCTACCTGAAGATATTATAGTGAACATCTTCTCTAGATTGCCGGTCAAGTCTTTAATCCGATTCACCTCCGTTTCAAAACGTCTGCGTTTCATTATATTGTCCGATCCCAAATTCGCCCATTCCCAACTCAAAGCAGCTCGTCAGCAGAAAACCCTCAACCGCAGACTCCTCGTCTCCACCGAGGCCCCTCAACTCGAATCCCTACAGTTGGATGATACGCCGTCGTTTGGGAGAGCCTTCCTCCCTGTTGATAAGAAATTCTTTTATATCTGGAACCCATCGATTGGGTTCTTCAAGCAATTACCTGACCCAGGTTTTCCCTTATGTGAAAATGTGCTAGCCTATTATGGTGTTGCCTATTTATCCGCCACCGATGACTACAAAGTTTTGGTAGCCACCTTTGGCTTTGGTGGAACCAAGTTAGAGGTCGAGATATTCTCAGTGAGAGCTCATATTTGGGAGAGGATTGAATCCCTCAGCGATGTTGAACTCCGTAGTCAGGGGACTTTTTCGAATAATGCACTTCATTGGCTAAATCACCATAACGAGCATGAGATGGTCTCTTTTGACTTGGCTGTGCAGGAGTTCCGGAGAATGCCACTGCCTAATTTCGACCATGATGGTAACAGTTTCAGCTATCTTGGGGTTTGTGGAGGGTGCCTGTGTGTGTCGCGTATTCCGAAGGGTGCTTGTGACTCTATTGATCTCTGGGTCATGAAAGAATATGACCTCTCCCATCCGCCTGAGTTGCGCTTGCATTCCAGAGAATTCTTGGTTGTGGAAACTAGTACAGTTGTCGCGAATTGGACTGGCAAGGGGTTCGAGTTGATAAGGATTGATCATGCAGAAGACGAGAAGCTTGGGTTGTATATGCTTAAGGGGGTTCGCATTTGTATGATTGAATATGAAGAGAGTCTAATTTGGATCAGTGATTATCATTCAGGAGAAAGAGATAGAGCAGGTCAAGATACTCGAAACCCATCAGAAGGCCTCAGGAAGCCGAAATGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

343

Amino Acids

39.38

Weight (kDa)

5.91

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 4.3e-08 F-box-like
F-box PF00646 6 - 43 5.1e-10 F-box domain
FBA_1 PF07734 93 - 249 1.5e-09 F-box associated beta propeller domain
FBA_3 PF08268 94 - 248 1.1e-09 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 968
AccB1I GGYRCC 1 cut(s) 675
AccB7I CCANNNNNTGG 1 cut(s) 302
AccII CGCG 2 cut(s) 691, 818
AccIII TCCGGA 1 cut(s) 606
AciI CCGC 4 cut(s) 5, 178, 384, 758
AclWI GGATC 2 cut(s) 116, 950
AcsI RAATTY 3 cut(s) 128, 275, 785
AcuI CTGAAG 1 cut(s) 45
AfaI GTAC 1 cut(s) 808
AfiI CCNNNNNNNGG 6 cut(s) 226, 245, 302, 329, 517, 1004
AflII CTTAAG 1 cut(s) 893
AgsI TTSAA 5 cut(s) 93, 313, 488, 506, 920
AhdI GACNNNNNGTC 1 cut(s) 188
AhlI ACTAGT 1 cut(s) 803
AjnI CCWGG 1 cut(s) 328
AluBI AGCT 4 cut(s) 155, 467, 654, 877
AluI AGCT 4 cut(s) 155, 467, 654, 877
Alw21I GWGCWC 1 cut(s) 469
Alw26I GTCTC 2 cut(s) 196, 583
AlwI GGATC 2 cut(s) 116, 950
Aor13HI TCCGGA 1 cut(s) 606
AoxI GGCC 2 cut(s) 201, 1006
ApeKI GCWGC 1 cut(s) 152
ApoI RAATTY 3 cut(s) 128, 275, 785
Asp700I GAANNNNTTC 1 cut(s) 44
AspLEI GCGC 1 cut(s) 771
AspS9I GGNCC 1 cut(s) 202
AsuHPI GGTGA 2 cut(s) 73, 548
AsuII TTCGAA 1 cut(s) 530
AsuNHI GCTAGC 1 cut(s) 355
AxyI CCTNAGG 1 cut(s) 1010
BanI GGYRCC 1 cut(s) 675
BanII GRGCYC 1 cut(s) 469
BbsI GAAGAC 2 cut(s) 21, 873
Bbv12I GWGCWC 1 cut(s) 469
BbvCI CCTCAGC 1 cut(s) 494
BbvI GCAGC 1 cut(s) 164
BccI CCATC 5 cut(s) 304, 568, 632, 762, 1006
BceAI ACGGC 1 cut(s) 223
BcgI CGANNNNNNTGC 4 cut(s) 169, 203, 820, 854
BciT130I CCWGG 1 cut(s) 330
BclI TGATCA 1 cut(s) 856
BcoDI GTCTC 2 cut(s) 196, 583
BcuI ACTAGT 1 cut(s) 803
BfaI CTAG 3 cut(s) 51, 356, 804
BfmI CTRYAG 1 cut(s) 221
BfrI CTTAAG 1 cut(s) 893
BfuAI ACCTGC 1 cut(s) 968
BisI GCNGC 1 cut(s) 153
BlsI GCNGC 1 cut(s) 154
Bme1390I CCNGG 1 cut(s) 330
BmeRI GACNNNNNGTC 1 cut(s) 188
BmgT120I GGNCC 1 cut(s) 202
BmiI GGNNCC 4 cut(s) 204, 293, 433, 677
BmrFI CCNGG 1 cut(s) 330
BmtI GCTAGC 1 cut(s) 359
BpiI GAAGAC 2 cut(s) 21, 873
BplI GAGNNNNNCTC 6 cut(s) 243, 275, 440, 472, 563, 595
Bpu10I CCTNAGC 1 cut(s) 494
Bpu14I TTCGAA 1 cut(s) 530
Bsa29I ATCGAT 1 cut(s) 299
BsaI GGTCTC 1 cut(s) 583
BsaJI CCNNGG 2 cut(s) 198, 328
BsaWI WCCGGW 1 cut(s) 606
Bsc4I CCNNNNNNNGG 6 cut(s) 226, 245, 302, 329, 517, 1004
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 1 cut(s) 832
Bse21I CCTNAGG 1 cut(s) 1010
BseAI TCCGGA 1 cut(s) 606
BseBI CCWGG 1 cut(s) 330
BseCI ATCGAT 1 cut(s) 299
BseDI CCNNGG 2 cut(s) 198, 328
BseGI GGATG 2 cut(s) 235, 754
BseLI CCNNNNNNNGG 6 cut(s) 226, 245, 302, 329, 517, 1004
BseMII CTCAG 4 cut(s) 471, 508, 753, 1024
BseNI ACTGG 1 cut(s) 832
BseRI GAGGAG 1 cut(s) 176
BseXI GCAGC 1 cut(s) 164
BsgI GTGCAG 1 cut(s) 617
Bsh1236I CGCG 2 cut(s) 691, 818
BshFI GGCC 2 cut(s) 203, 1008
BshNI GGYRCC 1 cut(s) 675
BshVI ATCGAT 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 469
BsiSI CCGG 2 cut(s) 59, 607
BslFI GGGAC 1 cut(s) 535
BslI CCNNNNNNNGG 6 cut(s) 226, 245, 302, 329, 517, 1004
BsmAI GTCTC 2 cut(s) 196, 583
BsmBI CGTCTC 1 cut(s) 196
BsmFI GGGAC 1 cut(s) 535
BsmI GAATGC 2 cut(s) 618, 775
BsnI GGCC 2 cut(s) 203, 1008
Bso31I GGTCTC 1 cut(s) 583
Bsp119I TTCGAA 1 cut(s) 530
Bsp1286I GDGCHC 1 cut(s) 469
Bsp13I TCCGGA 1 cut(s) 606
Bsp143I GATC 4 cut(s) 121, 721, 856, 942
Bsp68I TCGCGA 1 cut(s) 818
BspACI CCGC 4 cut(s) 5, 178, 384, 758
BspANI GGCC 2 cut(s) 203, 1008
BspCNI CTCAG 4 cut(s) 470, 507, 754, 1023
BspDI ATCGAT 1 cut(s) 299
BspEI TCCGGA 1 cut(s) 606
BspFNI CGCG 2 cut(s) 691, 818
BspHI TCATGA 1 cut(s) 732
BspLI GGNNCC 4 cut(s) 204, 293, 433, 677
BspMI ACCTGC 1 cut(s) 968
BspOI GCTAGC 1 cut(s) 359
BspPI GGATC 2 cut(s) 116, 950
BspT104I TTCGAA 1 cut(s) 530
BspT107I GGYRCC 1 cut(s) 675
BspTI CTTAAG 1 cut(s) 893
BspTNI GGTCTC 1 cut(s) 583
BsrFI RCCGGY 1 cut(s) 58
BsrI ACTGG 1 cut(s) 832
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 2 cut(s) 198, 328
BssMI GATC 4 cut(s) 121, 721, 856, 942
Bst2UI CCWGG 1 cut(s) 330
Bst4CI ACNGT 3 cut(s) 225, 647, 811
Bst6I CTCTTC 1 cut(s) 921
BstAFI CTTAAG 1 cut(s) 893
BstBI TTCGAA 1 cut(s) 530
BstC8I GCNNGC 2 cut(s) 357, 773
BstDEI CTNAG 4 cut(s) 457, 494, 762, 1010
BstENI CCTNNNNNAGG 1 cut(s) 327
BstF5I GGATG 2 cut(s) 235, 754
BstFNI CGCG 2 cut(s) 691, 818
BstHHI GCGC 1 cut(s) 771
BstKTI GATC 4 cut(s) 124, 724, 859, 945
BstMAI GTCTC 2 cut(s) 196, 583
BstMBI GATC 4 cut(s) 121, 721, 856, 942
BstMWI GCNNNNNNNGC 1 cut(s) 766
BstNI CCWGG 1 cut(s) 330
BstSCI CCNGG 1 cut(s) 328
BstSFI CTRYAG 1 cut(s) 221
BstUI CGCG 2 cut(s) 691, 818
BstV1I GCAGC 1 cut(s) 164
BstV2I GAAGAC 2 cut(s) 21, 873
Bsu15I ATCGAT 1 cut(s) 299
Bsu36I CCTNAGG 1 cut(s) 1010
BsuRI GGCC 2 cut(s) 203, 1008
BsuTUI ATCGAT 1 cut(s) 299
BtgZI GCGATG 1 cut(s) 513
BtsCI GGATG 2 cut(s) 235, 754
BtsI GCAGTG 1 cut(s) 617
BtsIMutI CAGTG 3 cut(s) 465, 617, 952
BtuMI TCGCGA 1 cut(s) 818
BveI ACCTGC 1 cut(s) 968
Cac8I GCNNGC 2 cut(s) 357, 773
CciI TCATGA 1 cut(s) 732
CfoI GCGC 1 cut(s) 771
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 1 cut(s) 202
ClaI ATCGAT 1 cut(s) 299
Csp6I GTAC 1 cut(s) 807
CviAII CATG 4 cut(s) 569, 635, 733, 860
CviQI GTAC 1 cut(s) 807
DdeI CTNAG 4 cut(s) 457, 494, 762, 1010
DpnI GATC 4 cut(s) 123, 723, 858, 944
DpnII GATC 4 cut(s) 121, 721, 856, 942
DriI GACNNNNNGTC 1 cut(s) 188
Eam1104I CTCTTC 1 cut(s) 921
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 921
EciI GGCGGA 3 cut(s) 20, 373, 747
Ecl136II GAGCTC 1 cut(s) 467
Eco147I AGGCCT 1 cut(s) 1008
Eco24I GRGCYC 1 cut(s) 469
Eco31I GGTCTC 1 cut(s) 583
Eco53kI GAGCTC 1 cut(s) 467
Eco57I CTGAAG 1 cut(s) 45
Eco81I CCTNAGG 1 cut(s) 1010
EcoICRI GAGCTC 1 cut(s) 467
EcoNI CCTNNNNNAGG 1 cut(s) 327
EcoO109I RGGNCCY 1 cut(s) 202
EcoRI GAATTC 1 cut(s) 785
EcoRII CCWGG 1 cut(s) 328
EcoT38I GRGCYC 1 cut(s) 469
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 4 cut(s) 572, 638, 736, 863
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 1 cut(s) 535
FatI CATG 4 cut(s) 568, 634, 732, 859
FbaI TGATCA 1 cut(s) 856
Fnu4HI GCNGC 1 cut(s) 153
FokI GGATG 2 cut(s) 242, 741
FriOI GRGCYC 1 cut(s) 469
Fsp4HI GCNGC 1 cut(s) 153
FspBI CTAG 3 cut(s) 51, 356, 804
GlaI GCGC 1 cut(s) 770
GluI GCNGC 1 cut(s) 153
HaeIII GGCC 2 cut(s) 203, 1008
HapII CCGG 2 cut(s) 59, 607
HhaI GCGC 1 cut(s) 771
Hin1II CATG 4 cut(s) 572, 638, 736, 863
Hin6I GCGC 1 cut(s) 769
HinP1I GCGC 1 cut(s) 769
HindIII AAGCTT 1 cut(s) 875
HinfI GANTC 6 cut(s) 78, 183, 215, 488, 713, 931
HpaII CCGG 2 cut(s) 59, 607
HphI GGTGA 2 cut(s) 73, 548
Hpy166II GTNNAC 1 cut(s) 40
Hpy188I TCNGA 4 cut(s) 77, 121, 699, 1003
Hpy8I GTNNAC 1 cut(s) 40
Hpy99I CGWCG 1 cut(s) 244
HpyAV CCTTC 3 cut(s) 265, 694, 998
HpyCH4III ACNGT 3 cut(s) 225, 647, 811
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 4 cut(s) 539, 598, 775, 863
HpyF10VI GCNNNNNNNGC 1 cut(s) 766
HpyF3I CTNAG 4 cut(s) 457, 494, 762, 1010
HpySE526I ACGT 1 cut(s) 97
Hsp92II CATG 4 cut(s) 572, 638, 736, 863
HspAI GCGC 1 cut(s) 769
Kpn2I TCCGGA 1 cut(s) 606
Ksp22I TGATCA 1 cut(s) 856
Kzo9I GATC 4 cut(s) 121, 721, 856, 942
Lsp1109I GCAGC 1 cut(s) 164
MaeI CTAG 3 cut(s) 51, 356, 804
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 2 cut(s) 641, 710
MalI GATC 4 cut(s) 123, 723, 858, 944
MboI GATC 4 cut(s) 121, 721, 856, 942
MboII GAAGA 6 cut(s) 26, 37, 38, 301, 878, 938
MhlI GDGCHC 1 cut(s) 469
MluCI AATT 7 cut(s) 128, 275, 317, 625, 785, 820, 936
MlyI GAGTC 3 cut(s) 177, 707, 940
MmeI TCCRAC 1 cut(s) 207
MroI TCCGGA 1 cut(s) 606
MroXI GAANNNNTTC 1 cut(s) 44
MseI TTAA 2 cut(s) 71, 894
MslI CAYNNNNRTG 1 cut(s) 911
MspCI CTTAAG 1 cut(s) 893
MspI CCGG 2 cut(s) 59, 607
MspR9I CCNGG 1 cut(s) 330
Mva1269I GAATGC 2 cut(s) 618, 775
MvaI CCWGG 1 cut(s) 330
MvnI CGCG 2 cut(s) 691, 818
MwoI GCNNNNNNNGC 1 cut(s) 766
NdeII GATC 4 cut(s) 121, 721, 856, 942
NheI GCTAGC 1 cut(s) 355
NlaIII CATG 4 cut(s) 572, 638, 736, 863
NlaIV GGNNCC 4 cut(s) 204, 293, 433, 677
NmuCI GTSAC 1 cut(s) 710
NruI TCGCGA 1 cut(s) 818
NspV TTCGAA 1 cut(s) 530
PagI TCATGA 1 cut(s) 732
PceI AGGCCT 1 cut(s) 1008
PcsI WCGNNNNNNNCGW 2 cut(s) 195, 695
PctI GAATGC 2 cut(s) 618, 775
PdmI GAANNNNTTC 1 cut(s) 44
PfeI GAWTC 3 cut(s) 78, 215, 488
PflMI CCANNNNNTGG 1 cut(s) 302
PkrI GCNGC 1 cut(s) 154
PleI GAGTC 3 cut(s) 177, 707, 939
PpsI GAGTC 3 cut(s) 177, 707, 939
Psp124BI GAGCTC 1 cut(s) 469
Psp6I CCWGG 1 cut(s) 328
PspGI CCWGG 1 cut(s) 328
PspN4I GGNNCC 4 cut(s) 204, 293, 433, 677
PspPI GGNCC 1 cut(s) 202
RruI TCGCGA 1 cut(s) 818
RsaI GTAC 1 cut(s) 808
RsaNI GTAC 1 cut(s) 807
RseI CAYNNNNRTG 1 cut(s) 911
SacI GAGCTC 1 cut(s) 469
SaqAI TTAA 2 cut(s) 71, 894
SatI GCNGC 1 cut(s) 153
Sau3AI GATC 4 cut(s) 121, 721, 856, 942
Sau96I GGNCC 1 cut(s) 202
SchI GAGTC 3 cut(s) 177, 707, 940
ScrFI CCNGG 1 cut(s) 330
SduI GDGCHC 1 cut(s) 469
SfcI CTRYAG 1 cut(s) 221
SfuI TTCGAA 1 cut(s) 530
SmiMI CAYNNNNRTG 1 cut(s) 911
SmlI CTYRAG 1 cut(s) 893
SmoI CTYRAG 1 cut(s) 893
SpeI ACTAGT 1 cut(s) 803
Sse9I AATT 7 cut(s) 128, 275, 317, 625, 785, 820, 936
SseBI AGGCCT 1 cut(s) 1008
SsiI CCGC 4 cut(s) 5, 178, 384, 758
SspMI CTAG 3 cut(s) 51, 356, 804
SstI GAGCTC 1 cut(s) 469
StuI AGGCCT 1 cut(s) 1008
StyD4I CCNGG 1 cut(s) 328
TaaI ACNGT 3 cut(s) 225, 647, 811
TaiI ACGT 1 cut(s) 100
TaqI TCGA 7 cut(s) 213, 299, 447, 530, 630, 840, 991
TasI AATT 7 cut(s) 128, 275, 317, 625, 785, 820, 936
TatI WGTACW 1 cut(s) 806
TfiI GAWTC 3 cut(s) 78, 215, 488
Tru1I TTAA 2 cut(s) 71, 894
Tru9I TTAA 2 cut(s) 71, 894
TscAI CASTG 3 cut(s) 465, 624, 952
TseFI GTSAC 1 cut(s) 710
TseI GCWGC 1 cut(s) 152
Tsp45I GTSAC 1 cut(s) 710
TspDTI ATGAA 4 cut(s) 97, 533, 749, 939
TspGWI ACGGA 2 cut(s) 76, 500
TspRI CASTG 3 cut(s) 465, 624, 952
Van91I CCANNNNNTGG 1 cut(s) 302
Vha464I CTTAAG 1 cut(s) 893
XagI CCTNNNNNAGG 1 cut(s) 327
XapI RAATTY 3 cut(s) 128, 275, 785
XbaI TCTAGA 1 cut(s) 50
XcmI CCANNNNNNNNNTGG 1 cut(s) 787
XmnI GAANNNNTTC 1 cut(s) 44
XspI CTAG 3 cut(s) 51, 356, 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.