FvH4_1g17560

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000082
Physical Location & Seq
Reverse (-)
10218708 .. 10219766
1059 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g17560.t1

Sequence Viewer

Length: 1059 bp
ATGACGGAAACACAAGAGCTTCCCGAAGAGATCATACTAAACATCTTTTCCAGACTCCCTGTCAAGTCCTTGATCCGATTCACCTCCGTTTCGAAACGTCTGCACTTCATCATACTCTCCGATCCCAAATTCGCCAAATTTCAACTCAAAGCAGCTCTTCGGCAGAGAACCCAAAGCCGCAGACTCCTCGTCTACACCGACGCCCCTCAACTGTCATCCCTACCCTTGGCTGCTGATACGCCGTCGTTTGGAGACCCTTCCTCCGTTAGAAAGTTCACTCTCCCTTCCCCGAAGGGCGAGTATCTGCTGTTACTGGGCTCCTGCAATGGTCTGGTATTTCTAACCTTTTACGCGGACTTCTTTTACGTCTGGAACCCATCGACTCGATTCTTTAAGAAATTACCAGACCCTGGTTTTTCCATATTACATGGAAACTTAGAAATCGTCTATTGTGGTGTGGGATATTTATCCGCTACTGATGACTATAAACTTTTTATAGCCTACTTGGACCTTGTTGATTGTAAGGTAAAGGTCGAGATGTTCTCGCTGACAACTCACATTTGGGAGAGGCTTGAAGCCGCAGGGGACTCTTTCGATATTGGATTCATTGTCAGTTCTCAGGGGACTCTTTTGAACGAAGCTCTTCATTGGCTAAACAAGCAAATAGTTTGTTTTGACTTGGCTGTAAAGGAGTTCCGGAGAATTCCGCTGCCTGATTTCGGTCATGATGGTAACATGTTCTGCTATCTTGGTTTGTATGAAGGGTGCCTTTGTGTATTGCGTTATCCTTTGGGTGTTTGTTATTCTGTTGATTTCTGGGTCATGAGGGAATATGGTGTGAGTGACTCGTGGACTATGCTCTTTAGTTCAAAACTATCTGATCCGCCTGAGTGGGGCATAATAAACTGGCCCTATAATTCGAGAAAATTAATGGTTGTGGAAAGTAGTACAGTTGCTTCGAAACTGACTGAAGAGGGGTTCGAGTTGACAAAGATTGATCATAAAGTAGGCCAGAAGGTTGGCCAGTATATGCTAGAGGGAATCAGATTTCTATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

353

Amino Acids

40.29

Weight (kDa)

6.33

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 5 - 41 1.1e-08 F-box-like
F-box PF00646 6 - 44 1.2e-09 F-box domain
FBA_3 PF08268 87 - 279 2.3e-11 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 765
AccB7I CCANNNNNTGG 1 cut(s) 410
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 353
AccIII TCCGGA 1 cut(s) 696
AciI CCGC 6 cut(s) 178, 353, 471, 579, 707, 884
AclWI GGATC 3 cut(s) 67, 116, 875
AcoI YGGCCR 1 cut(s) 1021
AcsI RAATTY 3 cut(s) 128, 137, 702
AcuI CTGAAG 1 cut(s) 990
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 1 cut(s) 949
AfiI CCNNNNNNNGG 5 cut(s) 226, 248, 410, 719, 893
AflIII ACRYGT 1 cut(s) 735
AgsI TTSAA 4 cut(s) 143, 575, 634, 870
AhdI GACNNNNNGTC 2 cut(s) 59, 188
AjnI CCWGG 1 cut(s) 409
AluBI AGCT 3 cut(s) 19, 155, 641
AluI AGCT 3 cut(s) 19, 155, 641
Alw26I GTCTC 1 cut(s) 246
AlwI GGATC 3 cut(s) 67, 116, 875
AlwNI CAGNNNCTG 1 cut(s) 410
Aor13HI TCCGGA 1 cut(s) 696
AoxI GGCC 3 cut(s) 908, 1009, 1021
ApeKI GCWGC 3 cut(s) 152, 230, 709
ApoI RAATTY 3 cut(s) 128, 137, 702
AseI ATTAAT 1 cut(s) 929
Asp700I GAANNNNTTC 1 cut(s) 642
AspS9I GGNCC 2 cut(s) 508, 909
AsuHPI GGTGA 1 cut(s) 73
AsuII TTCGAA 2 cut(s) 92, 959
AvaII GGWCC 1 cut(s) 508
BalI TGGCCA 1 cut(s) 1023
BanI GGYRCC 1 cut(s) 765
BanII GRGCYC 1 cut(s) 320
BarI GAAGNNNNNNTAC 4 cut(s) 18, 50, 940, 972
BauI CACGAG 1 cut(s) 847
BbvI GCAGC 3 cut(s) 164, 217, 696
BccI CCATC 2 cut(s) 385, 722
BceAI ACGGC 1 cut(s) 226
BcgI CGANNNNNNTGC 4 cut(s) 82, 116, 169, 203
BciT130I CCWGG 1 cut(s) 411
BclI TGATCA 1 cut(s) 997
BcoDI GTCTC 1 cut(s) 246
BfaI CTAG 1 cut(s) 1034
BisI GCNGC 5 cut(s) 153, 178, 231, 579, 710
BlsI GCNGC 5 cut(s) 154, 179, 232, 580, 711
Bme1390I CCNGG 1 cut(s) 411
Bme18I GGWCC 1 cut(s) 508
BmeRI GACNNNNNGTC 2 cut(s) 59, 188
BmgT120I GGNCC 2 cut(s) 508, 909
BmiI GGNNCC 3 cut(s) 319, 374, 767
BmrFI CCNGG 1 cut(s) 411
BmrI ACTGGG 1 cut(s) 323
BmuI ACTGGG 1 cut(s) 323
BplI GAGNNNNNCTC 2 cut(s) 527, 559
Bpu14I TTCGAA 2 cut(s) 92, 959
BsaBI GATNNNNATC 1 cut(s) 466
BsaHI GRCGYC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 246
BsaJI CCNNGG 2 cut(s) 225, 409
BsaWI WCCGGW 1 cut(s) 696
BsaXI ACNNNNNCTCC 2 cut(s) 245, 275
Bsc4I CCNNNNNNNGG 5 cut(s) 226, 248, 410, 719, 893
Bse1I ACTGG 3 cut(s) 318, 911, 1024
Bse3DI GCAATG 1 cut(s) 331
Bse8I GATNNNNATC 1 cut(s) 466
BseAI TCCGGA 1 cut(s) 696
BseBI CCWGG 1 cut(s) 411
BseDI CCNNGG 2 cut(s) 225, 409
BseGI GGATG 1 cut(s) 215
BseJI GATNNNNATC 1 cut(s) 466
BseLI CCNNNNNNNGG 5 cut(s) 226, 248, 410, 719, 893
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 2 cut(s) 632, 879
BseNI ACTGG 3 cut(s) 318, 911, 1024
BseRI GAGGAG 1 cut(s) 176
BseXI GCAGC 3 cut(s) 164, 217, 696
BsgI GTGCAG 1 cut(s) 86
Bsh1236I CGCG 1 cut(s) 353
BshFI GGCC 3 cut(s) 910, 1011, 1023
BshNI GGYRCC 1 cut(s) 765
BsiSI CCGG 1 cut(s) 697
BslFI GGGAC 2 cut(s) 599, 637
BslI CCNNNNNNNGG 5 cut(s) 226, 248, 410, 719, 893
BsmAI GTCTC 1 cut(s) 246
BsmFI GGGAC 2 cut(s) 599, 637
BsnI GGCC 3 cut(s) 910, 1011, 1023
Bso31I GGTCTC 1 cut(s) 246
Bsp119I TTCGAA 2 cut(s) 92, 959
Bsp1286I GDGCHC 1 cut(s) 320
Bsp13I TCCGGA 1 cut(s) 696
Bsp143I GATC 5 cut(s) 30, 72, 121, 880, 997
BspACI CCGC 6 cut(s) 178, 353, 471, 579, 707, 884
BspANI GGCC 3 cut(s) 910, 1011, 1023
BspCNI CTCAG 2 cut(s) 631, 880
BspEI TCCGGA 1 cut(s) 696
BspFNI CGCG 1 cut(s) 353
BspHI TCATGA 2 cut(s) 724, 822
BspLI GGNNCC 3 cut(s) 319, 374, 767
BspPI GGATC 3 cut(s) 67, 116, 875
BspQI GCTCTTC 2 cut(s) 162, 648
BspT104I TTCGAA 2 cut(s) 92, 959
BspT107I GGYRCC 1 cut(s) 765
BspTNI GGTCTC 1 cut(s) 246
BsrDI GCAATG 1 cut(s) 331
BsrI ACTGG 3 cut(s) 318, 911, 1024
BssECI CCNNGG 2 cut(s) 225, 409
BssMI GATC 5 cut(s) 30, 72, 121, 880, 997
BssNI GRCGYC 1 cut(s) 201
BssSI CACGAG 1 cut(s) 847
BssT1I CCWWGG 1 cut(s) 225
Bst2BI CACGAG 1 cut(s) 847
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 2 cut(s) 213, 952
Bst6I CTCTTC 4 cut(s) 21, 162, 648, 966
BstACI GRCGYC 1 cut(s) 201
BstBI TTCGAA 2 cut(s) 92, 959
BstDEI CTNAG 3 cut(s) 436, 618, 888
BstF5I GGATG 1 cut(s) 215
BstFNI CGCG 1 cut(s) 353
BstKTI GATC 5 cut(s) 33, 75, 124, 883, 1000
BstMAI GTCTC 1 cut(s) 246
BstMBI GATC 5 cut(s) 30, 72, 121, 880, 997
BstMWI GCNNNNNNNGC 1 cut(s) 658
BstNI CCWGG 1 cut(s) 411
BstNSI RCATGY 1 cut(s) 739
BstSCI CCNGG 1 cut(s) 409
BstUI CGCG 1 cut(s) 353
BstV1I GCAGC 3 cut(s) 164, 217, 696
BstXI CCANNNNNNTGG 1 cut(s) 1019
BsuRI GGCC 3 cut(s) 910, 1011, 1023
BtsCI GGATG 1 cut(s) 215
CaiI CAGNNNCTG 1 cut(s) 410
CciI TCATGA 2 cut(s) 724, 822
Cfr13I GGNCC 2 cut(s) 508, 909
CseI GACGC 1 cut(s) 209
Csp6I GTAC 1 cut(s) 948
CviAII CATG 4 cut(s) 428, 725, 736, 823
CviQI GTAC 1 cut(s) 948
DdeI CTNAG 3 cut(s) 436, 618, 888
DpnI GATC 5 cut(s) 32, 74, 123, 882, 999
DpnII GATC 5 cut(s) 30, 72, 121, 880, 997
DriI GACNNNNNGTC 2 cut(s) 59, 188
EaeI YGGCCR 1 cut(s) 1021
Eam1104I CTCTTC 4 cut(s) 21, 162, 648, 966
Eam1105I GACNNNNNGTC 2 cut(s) 59, 188
EarI CTCTTC 4 cut(s) 21, 162, 648, 966
EciI GGCGGA 1 cut(s) 873
Eco130I CCWWGG 1 cut(s) 225
Eco24I GRGCYC 1 cut(s) 320
Eco31I GGTCTC 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 508
Eco57I CTGAAG 1 cut(s) 990
EcoRI GAATTC 1 cut(s) 702
EcoRII CCWGG 1 cut(s) 409
EcoT14I CCWWGG 1 cut(s) 225
EcoT38I GRGCYC 1 cut(s) 320
ErhI CCWWGG 1 cut(s) 225
FaeI CATG 4 cut(s) 431, 728, 739, 826
FalI AAGNNNNNCTT 4 cut(s) 141, 173, 753, 785
FaqI GGGAC 2 cut(s) 599, 637
FatI CATG 4 cut(s) 427, 724, 735, 822
FbaI TGATCA 1 cut(s) 997
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 5 cut(s) 153, 178, 231, 579, 710
FokI GGATG 1 cut(s) 202
FriOI GRGCYC 1 cut(s) 320
Fsp4HI GCNGC 5 cut(s) 153, 178, 231, 579, 710
FspBI CTAG 1 cut(s) 1034
GluI GCNGC 5 cut(s) 153, 178, 231, 579, 710
HaeIII GGCC 3 cut(s) 910, 1011, 1023
HapII CCGG 1 cut(s) 697
HgaI GACGC 1 cut(s) 209
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 4 cut(s) 431, 728, 739, 826
HincII GTYRAC 1 cut(s) 987
HindII GTYRAC 1 cut(s) 987
HpaII CCGG 1 cut(s) 697
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 4 cut(s) 193, 276, 852, 987
Hpy188I TCNGA 4 cut(s) 77, 121, 880, 1046
Hpy188III TCNNGA 8 cut(s) 23, 51, 370, 535, 697, 725, 823, 921
Hpy8I GTNNAC 4 cut(s) 193, 276, 852, 987
Hpy99I CGWCG 2 cut(s) 203, 247
HpyAV CCTTC 5 cut(s) 267, 286, 294, 755, 1009
HpyCH4III ACNGT 2 cut(s) 213, 952
HpyCH4IV ACGT 2 cut(s) 97, 366
HpyCH4V TGCA 2 cut(s) 103, 324
HpyF10VI GCNNNNNNNGC 1 cut(s) 658
HpyF3I CTNAG 3 cut(s) 436, 618, 888
HpySE526I ACGT 2 cut(s) 97, 366
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 4 cut(s) 431, 728, 739, 826
Kpn2I TCCGGA 1 cut(s) 696
Ksp22I TGATCA 1 cut(s) 997
Kzo9I GATC 5 cut(s) 30, 72, 121, 880, 997
LguI GCTCTTC 2 cut(s) 162, 648
LmnI GCTCC 1 cut(s) 323
Lsp1109I GCAGC 3 cut(s) 164, 217, 696
MaeI CTAG 1 cut(s) 1034
MaeII ACGT 2 cut(s) 97, 366
MaeIII GTNAC 3 cut(s) 309, 731, 842
MalI GATC 5 cut(s) 32, 74, 123, 882, 999
MboI GATC 5 cut(s) 30, 72, 121, 880, 997
MboII GAAGA 4 cut(s) 38, 149, 635, 983
MhlI GDGCHC 1 cut(s) 320
MlsI TGGCCA 1 cut(s) 1023
MluCI AATT 6 cut(s) 128, 137, 398, 702, 916, 926
MluNI TGGCCA 1 cut(s) 1023
MlyI GAGTC 6 cut(s) 48, 177, 376, 581, 619, 839
MnlI CCTC 8 cut(s) 94, 197, 216, 271, 561, 819, 967, 1030
Mox20I TGGCCA 1 cut(s) 1023
MroI TCCGGA 1 cut(s) 696
MroXI GAANNNNTTC 1 cut(s) 642
MscI TGGCCA 1 cut(s) 1023
MseI TTAA 2 cut(s) 393, 929
Msp20I TGGCCA 1 cut(s) 1023
MspA1I CMGCKG 1 cut(s) 709
MspI CCGG 1 cut(s) 697
MspR9I CCNGG 1 cut(s) 411
MvaI CCWGG 1 cut(s) 411
MvnI CGCG 1 cut(s) 353
MwoI GCNNNNNNNGC 1 cut(s) 658
NdeII GATC 5 cut(s) 30, 72, 121, 880, 997
NlaIII CATG 4 cut(s) 431, 728, 739, 826
NlaIV GGNNCC 3 cut(s) 319, 374, 767
NmuCI GTSAC 1 cut(s) 842
NspI RCATGY 1 cut(s) 739
NspV TTCGAA 2 cut(s) 92, 959
PagI TCATGA 2 cut(s) 724, 822
PciI ACATGT 1 cut(s) 735
PciSI GCTCTTC 2 cut(s) 162, 648
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 4 cut(s) 78, 387, 603, 1041
PflMI CCANNNNNTGG 1 cut(s) 410
PkrI GCNGC 5 cut(s) 154, 179, 232, 580, 711
PleI GAGTC 6 cut(s) 48, 177, 376, 581, 619, 839
PpsI GAGTC 6 cut(s) 48, 177, 376, 581, 619, 839
PscI ACATGT 1 cut(s) 735
PshBI ATTAAT 1 cut(s) 929
Psp6I CCWGG 1 cut(s) 409
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 3 cut(s) 319, 374, 767
PspPI GGNCC 2 cut(s) 508, 909
PstNI CAGNNNCTG 1 cut(s) 410
RsaI GTAC 1 cut(s) 949
RsaNI GTAC 1 cut(s) 948
SapI GCTCTTC 2 cut(s) 162, 648
SaqAI TTAA 2 cut(s) 393, 929
SatI GCNGC 5 cut(s) 153, 178, 231, 579, 710
Sau3AI GATC 5 cut(s) 30, 72, 121, 880, 997
Sau96I GGNCC 2 cut(s) 508, 909
SchI GAGTC 6 cut(s) 48, 177, 376, 581, 619, 839
ScrFI CCNGG 1 cut(s) 411
SduI GDGCHC 1 cut(s) 320
SfuI TTCGAA 2 cut(s) 92, 959
SinI GGWCC 1 cut(s) 508
Sse9I AATT 6 cut(s) 128, 137, 398, 702, 916, 926
SsiI CCGC 6 cut(s) 178, 353, 471, 579, 707, 884
SspMI CTAG 1 cut(s) 1034
StyD4I CCNGG 1 cut(s) 409
StyI CCWWGG 1 cut(s) 225
TaaI ACNGT 2 cut(s) 213, 952
TaiI ACGT 2 cut(s) 100, 369
TaqI TCGA 8 cut(s) 92, 380, 385, 534, 594, 920, 959, 981
TaqII GACCGA 1 cut(s) 710
TasI AATT 6 cut(s) 128, 137, 398, 702, 916, 926
TatI WGTACW 1 cut(s) 947
TauI GCSGC 2 cut(s) 180, 581
TfiI GAWTC 4 cut(s) 78, 387, 603, 1041
Tru1I TTAA 2 cut(s) 393, 929
Tru9I TTAA 2 cut(s) 393, 929
TseFI GTSAC 1 cut(s) 842
TseI GCWGC 3 cut(s) 152, 230, 709
Tsp45I GTSAC 1 cut(s) 842
TspDTI ATGAA 4 cut(s) 97, 595, 635, 774
TspGWI ACGGA 3 cut(s) 20, 76, 253
Van91I CCANNNNNTGG 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 508
VspI ATTAAT 1 cut(s) 929
XapI RAATTY 3 cut(s) 128, 137, 702
XceI RCATGY 1 cut(s) 739
XmiI GTMKAC 1 cut(s) 192
XmnI GAANNNNTTC 1 cut(s) 642
XspI CTAG 1 cut(s) 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.