Rmu_sc0000625.1_g000006

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000625.1
OG0000082
Physical Location & Seq
Reverse (-)
30385 .. 31578
1194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000625.1_g000006.1.cds

Sequence Viewer

Length: 1194 bp
atggcaaaaaattacctaccggaagatatgattgtggaaatccttcacagggttcccccaaaacccttggtccgattcagcactgtttcaaaacggtggcattccattatatgtgccgacccacaattcaagaaatcctatgtgaaattagcatccgagaagcaaaccctccgtcgtagactcctcttctccccccgtaccttcccctatcaagttggagccttagacttggagacgctgtcgccgtcgtttggagtcagaaacgtcagctgcccattcaataaattatttggatatcgtttcgacctactaggctcctgcaatgggttggtatgtgtagcctttgttgaccctgtgcgaagcattctaattgttcggcaaccacttcttcggtctgtccgaaacttgtatatttggaacccatcaaacggattcttccaaaaattagacgaccctggtttttcccatcaaacggatgcatatagtaccgtggtttactctgctcttggccatttgtcagctacagacgactacaaaatttttgtagccactggtagtatcattgaggagggtaggaatatctgcagtcggtgggagatgaggaaggtcaatatattctcattgaggtgtaagttatggaaaaggattgaactcccttcatacttaagcctccagggtcgggggactctctgcaatgagtcccttcattggatgctctatccctctgaatcaagagatatagatatcgttgcatttgatttggccaaggaagagttcagcaggcaaatcccgctgcctgactctctcatgcaaggccggggcggtttcgtagaacttggcgtttattccgcaggatgcctgtgtgtgatgtctagttccagtaaagactctattgatttgtgggtgatgacagaatatggcgtgcgtgactcctggactaagctcttcaactttaggattacctacccgccgtgtgacacgtatgtgttggttaaatcaatcatggttacggaggagggtacactttctgtcctttgtagtctggttggatgctatgatcacaagttagtcttgaagattgatcacgaacaagggacagtaggccaatatcaattgcctaagagtcccgtgatgagtaccataattcaacatgaagagatggaatatgaagagagtccactttggtggatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

397

Amino Acids

45.49

Weight (kDa)

7.91

Isoelectric Point (pI)

56.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 178
AciI CCGC 4 cut(s) 791, 822, 849, 968
AcoI YGGCCR 2 cut(s) 508, 762
AcsI RAATTY 1 cut(s) 537
AfaI GTAC 4 cut(s) 199, 487, 1021, 1138
AfiI CCNNNNNNNGG 7 cut(s) 49, 251, 324, 428, 472, 679, 708
AflII CTTAAG 1 cut(s) 664
AflIII ACRYGT 1 cut(s) 978
AgsI TTSAA 7 cut(s) 90, 130, 280, 650, 949, 1075, 1148
AjnI CCWGG 3 cut(s) 454, 672, 932
AjuI GAANNNNNNNTTGG 2 cut(s) 758, 790
AleI CACNNNNGTG 2 cut(s) 983, 1183
AluBI AGCT 3 cut(s) 270, 521, 943
AluI AGCT 3 cut(s) 270, 521, 943
Alw26I GTCTC 1 cut(s) 227
AoxI GGCC 4 cut(s) 508, 762, 814, 1102
ApeKI GCWGC 2 cut(s) 270, 793
ApoI RAATTY 1 cut(s) 537
ArsI GACNNNNNNTTYG 2 cut(s) 157, 189
Asp700I GAANNNNTTC 1 cut(s) 42
AspS9I GGNCC 1 cut(s) 70
AsuC2I CCSGG 1 cut(s) 818
AsuHPI GGTGA 1 cut(s) 916
AvaII GGWCC 1 cut(s) 70
BalI TGGCCA 2 cut(s) 510, 764
BbvI GCAGC 2 cut(s) 257, 780
BccI CCATC 3 cut(s) 430, 474, 1153
BceAI ACGGC 2 cut(s) 229, 955
BciT130I CCWGG 3 cut(s) 456, 674, 934
BclI TGATCA 2 cut(s) 1057, 1081
BcnI CCSGG 1 cut(s) 818
BcoDI GTCTC 1 cut(s) 227
BfaI CTAG 2 cut(s) 311, 873
BfmI CTRYAG 2 cut(s) 522, 583
BfrI CTTAAG 1 cut(s) 664
BisI GCNGC 2 cut(s) 271, 794
BlsI GCNGC 2 cut(s) 272, 795
Bme1390I CCNGG 4 cut(s) 456, 674, 818, 934
Bme18I GGWCC 1 cut(s) 70
BmgT120I GGNCC 1 cut(s) 70
BmiI GGNNCC 4 cut(s) 54, 220, 316, 419
BmrFI CCNGG 4 cut(s) 456, 674, 818, 934
BmsI GCATC 5 cut(s) 161, 466, 702, 845, 1040
BpmI CTGGAG 1 cut(s) 656
BpuMI CCSGG 1 cut(s) 818
BsaAI YACGTR 1 cut(s) 981
BsaJI CCNNGG 6 cut(s) 66, 454, 489, 673, 765, 817
BsaWI WCCGGW 1 cut(s) 19
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 251, 324, 428, 472, 679, 708
Bse1I ACTGG 2 cut(s) 556, 879
Bse3DI GCAATG 2 cut(s) 328, 700
BseBI CCWGG 3 cut(s) 456, 674, 934
BseDI CCNNGG 6 cut(s) 66, 454, 489, 673, 765, 817
BseGI GGATG 5 cut(s) 152, 481, 717, 860, 1055
BseLI CCNNNNNNNGG 7 cut(s) 49, 251, 324, 428, 472, 679, 708
BseMI GCAATG 2 cut(s) 328, 700
BseNI ACTGG 2 cut(s) 556, 879
BseRI GAGGAG 3 cut(s) 173, 581, 1028
BseXI GCAGC 2 cut(s) 257, 780
BshFI GGCC 4 cut(s) 510, 764, 816, 1104
BsiSI CCGG 2 cut(s) 20, 817
BslFI GGGAC 4 cut(s) 685, 697, 1108, 1110
BslI CCNNNNNNNGG 7 cut(s) 49, 251, 324, 428, 472, 679, 708
BsmAI GTCTC 1 cut(s) 227
BsmBI CGTCTC 1 cut(s) 227
BsmFI GGGAC 4 cut(s) 685, 697, 1108, 1110
BsmI GAATGC 2 cut(s) 100, 363
BsnI GGCC 4 cut(s) 510, 764, 816, 1104
Bsp143I GATC 2 cut(s) 1057, 1081
BspACI CCGC 4 cut(s) 791, 822, 849, 968
BspANI GGCC 4 cut(s) 510, 764, 816, 1104
BspLI GGNNCC 4 cut(s) 54, 220, 316, 419
BspMAI CTGCAG 1 cut(s) 587
BspQI GCTCTTC 1 cut(s) 950
BspTI CTTAAG 1 cut(s) 664
BsrDI GCAATG 2 cut(s) 328, 700
BsrI ACTGG 2 cut(s) 556, 879
BssECI CCNNGG 6 cut(s) 66, 454, 489, 673, 765, 817
BssMI GATC 2 cut(s) 1057, 1081
BssT1I CCWWGG 2 cut(s) 66, 765
Bst2UI CCWGG 3 cut(s) 456, 674, 934
Bst4CI ACNGT 4 cut(s) 85, 96, 490, 1099
Bst6I CTCTTC 5 cut(s) 191, 765, 950, 1149, 1164
BstAFI CTTAAG 1 cut(s) 664
BstBAI YACGTR 1 cut(s) 981
BstC8I GCNNGC 2 cut(s) 782, 923
BstDEI CTNAG 3 cut(s) 223, 939, 1119
BstDSI CCRYGG 1 cut(s) 489
BstF5I GGATG 5 cut(s) 152, 481, 717, 860, 1055
BstKTI GATC 2 cut(s) 1060, 1084
BstMAI GTCTC 1 cut(s) 227
BstMBI GATC 2 cut(s) 1057, 1081
BstMWI GCNNNNNNNGC 1 cut(s) 790
BstNI CCWGG 3 cut(s) 456, 674, 934
BstSCI CCNGG 4 cut(s) 454, 672, 816, 932
BstSFI CTRYAG 2 cut(s) 522, 583
BstV1I GCAGC 2 cut(s) 257, 780
BstXI CCANNNNNNTGG 1 cut(s) 1185
BsuRI GGCC 4 cut(s) 510, 764, 816, 1104
BtgI CCRYGG 1 cut(s) 489
BtsCI GGATG 5 cut(s) 152, 481, 717, 860, 1055
BtsIMutI CAGTG 2 cut(s) 81, 549
Cac8I GCNNGC 2 cut(s) 782, 923
Cfr13I GGNCC 1 cut(s) 70
CseI GACGC 1 cut(s) 244
Csp6I GTAC 4 cut(s) 198, 486, 1020, 1137
CviAII CATG 3 cut(s) 808, 1003, 1151
CviQI GTAC 4 cut(s) 198, 486, 1020, 1137
DdeI CTNAG 3 cut(s) 223, 939, 1119
DpnI GATC 2 cut(s) 1059, 1083
DpnII GATC 2 cut(s) 1057, 1081
EaeI YGGCCR 2 cut(s) 508, 762
Eam1104I CTCTTC 5 cut(s) 191, 765, 950, 1149, 1164
EarI CTCTTC 5 cut(s) 191, 765, 950, 1149, 1164
Eco130I CCWWGG 2 cut(s) 66, 765
Eco32I GATATC 2 cut(s) 296, 745
Eco47I GGWCC 1 cut(s) 70
EcoRII CCWGG 3 cut(s) 454, 672, 932
EcoRV GATATC 2 cut(s) 296, 745
EcoT14I CCWWGG 2 cut(s) 66, 765
EcoT22I ATGCAT 1 cut(s) 481
ErhI CCWWGG 2 cut(s) 66, 765
Esp3I CGTCTC 1 cut(s) 227
FaeI CATG 3 cut(s) 811, 1006, 1154
FalI AAGNNNNNCTT 2 cut(s) 1055, 1087
FaqI GGGAC 4 cut(s) 685, 697, 1108, 1110
FatI CATG 3 cut(s) 807, 1002, 1150
FauI CCCGC 2 cut(s) 798, 975
FbaI TGATCA 2 cut(s) 1057, 1081
FblI GTMKAC 1 cut(s) 178
Fnu4HI GCNGC 2 cut(s) 271, 794
FokI GGATG 5 cut(s) 139, 488, 724, 867, 1062
Fsp4HI GCNGC 2 cut(s) 271, 794
FspBI CTAG 2 cut(s) 311, 873
GluI GCNGC 2 cut(s) 271, 794
GsuI CTGGAG 1 cut(s) 656
HaeIII GGCC 4 cut(s) 510, 764, 816, 1104
HapII CCGG 2 cut(s) 20, 817
HgaI GACGC 1 cut(s) 244
Hin1II CATG 3 cut(s) 811, 1006, 1154
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HpaII CCGG 2 cut(s) 20, 817
HphI GGTGA 1 cut(s) 916
Hpy166II GTNNAC 5 cut(s) 179, 349, 496, 1022, 1178
Hpy188I TCNGA 5 cut(s) 74, 157, 260, 401, 727
Hpy188III TCNNGA 4 cut(s) 130, 732, 1072, 1085
Hpy8I GTNNAC 5 cut(s) 179, 349, 496, 1022, 1178
Hpy99I CGWCG 2 cut(s) 177, 250
HpyAV CCTTC 5 cut(s) 53, 211, 598, 666, 713
HpyCH4III ACNGT 4 cut(s) 85, 96, 490, 1099
HpyCH4IV ACGT 2 cut(s) 264, 980
HpyCH4V TGCA 6 cut(s) 321, 479, 585, 693, 752, 811
HpyF10VI GCNNNNNNNGC 1 cut(s) 790
HpyF3I CTNAG 3 cut(s) 223, 939, 1119
HpySE526I ACGT 2 cut(s) 264, 980
Hsp92II CATG 3 cut(s) 811, 1006, 1154
Ksp22I TGATCA 2 cut(s) 1057, 1081
Kzo9I GATC 2 cut(s) 1057, 1081
LguI GCTCTTC 1 cut(s) 950
LmnI GCTCC 2 cut(s) 218, 320
Lsp1109I GCAGC 2 cut(s) 257, 780
LweI GCATC 5 cut(s) 161, 466, 702, 845, 1040
MaeI CTAG 2 cut(s) 311, 873
MaeII ACGT 2 cut(s) 264, 980
MaeIII GTNAC 3 cut(s) 926, 974, 1006
MalI GATC 2 cut(s) 1059, 1083
MboI GATC 2 cut(s) 1057, 1081
MboII GAAGA 9 cut(s) 35, 178, 380, 427, 782, 937, 1087, 1166, 1181
MfeI CAATTG 1 cut(s) 1112
MlsI TGGCCA 2 cut(s) 510, 764
MluCI AATT 9 cut(s) 10, 125, 146, 284, 369, 443, 537, 1112, 1143
MluNI TGGCCA 2 cut(s) 510, 764
MlyI GAGTC 9 cut(s) 174, 264, 679, 707, 794, 881, 923, 1132, 1183
MmeI TCCRAC 2 cut(s) 196, 1027
Mox20I TGGCCA 2 cut(s) 510, 764
Mph1103I ATGCAT 1 cut(s) 481
MroXI GAANNNNTTC 1 cut(s) 42
MscI TGGCCA 2 cut(s) 510, 764
MseI TTAA 2 cut(s) 665, 993
MslI CAYNNNNRTG 3 cut(s) 625, 983, 1183
Msp20I TGGCCA 2 cut(s) 510, 764
MspA1I CMGCKG 2 cut(s) 270, 793
MspCI CTTAAG 1 cut(s) 664
MspI CCGG 2 cut(s) 20, 817
MspR9I CCNGG 4 cut(s) 456, 674, 818, 934
MunI CAATTG 1 cut(s) 1112
Mva1269I GAATGC 2 cut(s) 100, 363
MvaI CCWGG 3 cut(s) 456, 674, 934
MwoI GCNNNNNNNGC 1 cut(s) 790
NciI CCSGG 1 cut(s) 818
NdeII GATC 2 cut(s) 1057, 1081
NlaIII CATG 3 cut(s) 811, 1006, 1154
NlaIV GGNNCC 4 cut(s) 54, 220, 316, 419
NmuCI GTSAC 2 cut(s) 926, 974
NsiI ATGCAT 1 cut(s) 481
OliI CACNNNNGTG 2 cut(s) 983, 1183
PciSI GCTCTTC 1 cut(s) 950
PcsI WCGNNNNNNNCGW 2 cut(s) 242, 397
PctI GAATGC 2 cut(s) 100, 363
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 3 cut(s) 75, 432, 728
PflFI GACNNNGTC 1 cut(s) 238
PfoI TCCNGGA 1 cut(s) 932
PkrI GCNGC 2 cut(s) 272, 795
PleI GAGTC 9 cut(s) 174, 263, 679, 706, 794, 881, 923, 1131, 1182
PpsI GAGTC 9 cut(s) 174, 263, 679, 706, 794, 881, 923, 1131, 1182
Ppu21I YACGTR 1 cut(s) 981
Psp6I CCWGG 3 cut(s) 454, 672, 932
PspGI CCWGG 3 cut(s) 454, 672, 932
PspN4I GGNNCC 4 cut(s) 54, 220, 316, 419
PspPI GGNCC 1 cut(s) 70
PstI CTGCAG 1 cut(s) 587
PsyI GACNNNGTC 1 cut(s) 238
PvuII CAGCTG 1 cut(s) 270
RsaI GTAC 4 cut(s) 199, 487, 1021, 1138
RsaNI GTAC 4 cut(s) 198, 486, 1020, 1137
RseI CAYNNNNRTG 3 cut(s) 625, 983, 1183
SapI GCTCTTC 1 cut(s) 950
SaqAI TTAA 2 cut(s) 665, 993
SatI GCNGC 2 cut(s) 271, 794
Sau3AI GATC 2 cut(s) 1057, 1081
Sau96I GGNCC 1 cut(s) 70
SchI GAGTC 9 cut(s) 174, 264, 679, 707, 794, 881, 923, 1132, 1183
ScrFI CCNGG 4 cut(s) 456, 674, 818, 934
SfaNI GCATC 5 cut(s) 161, 466, 702, 845, 1040
SfcI CTRYAG 2 cut(s) 522, 583
SinI GGWCC 1 cut(s) 70
SmiMI CAYNNNNRTG 3 cut(s) 625, 983, 1183
SmlI CTYRAG 1 cut(s) 664
SmoI CTYRAG 1 cut(s) 664
Sse9I AATT 9 cut(s) 10, 125, 146, 284, 369, 443, 537, 1112, 1143
SsiI CCGC 4 cut(s) 791, 822, 849, 968
SspMI CTAG 2 cut(s) 311, 873
StyD4I CCNGG 4 cut(s) 454, 672, 816, 932
StyI CCWWGG 2 cut(s) 66, 765
TaaI ACNGT 4 cut(s) 85, 96, 490, 1099
TaiI ACGT 2 cut(s) 267, 983
TaqI TCGA 1 cut(s) 303
TaqII GACCGA 1 cut(s) 381
TasI AATT 9 cut(s) 10, 125, 146, 284, 369, 443, 537, 1112, 1143
TfiI GAWTC 3 cut(s) 75, 432, 728
Tru1I TTAA 2 cut(s) 665, 993
Tru9I TTAA 2 cut(s) 665, 993
TscAI CASTG 2 cut(s) 88, 556
TseFI GTSAC 2 cut(s) 926, 974
TseI GCWGC 2 cut(s) 270, 793
Tsp45I GTSAC 2 cut(s) 926, 974
TspDTI ATGAA 4 cut(s) 648, 695, 1167, 1182
TspGWI ACGGA 4 cut(s) 161, 444, 488, 1025
TspRI CASTG 2 cut(s) 88, 556
Tth111I GACNNNGTC 1 cut(s) 238
Vha464I CTTAAG 1 cut(s) 664
VpaK11BI GGWCC 1 cut(s) 70
XapI RAATTY 1 cut(s) 537
XmiI GTMKAC 1 cut(s) 178
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 2 cut(s) 311, 873
Zsp2I ATGCAT 1 cut(s) 481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.