Rw2G015690

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000082
Physical Location & Seq
Reverse (-)
18340241 .. 18341737
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G015690.1

Sequence Viewer

Length: 1101 bp
ATGGCGGAAACAGTAAACCTACCGGAAGAGATTATAGTGAATATCCTTACTTGGTTGCCCCTCAAGTCCTTAATCCGATTCACCTCCGTTTCGAAACATATGCGTTTCCTTATTTTGTCCGATCCCAAATTCGCCCTATCCCAACTTAAAGCAGCTCGTCAGCAGAAAACCCTCAGCCGCAGACTCCTCGTCTTCACCGACGCCCCTCCACTCGAACTCGAATCCATACACTTGGATGATACGCCGTCGTTTGGAGAGCCTTCGTCCATTAGAAAGCCCAGCTTCCCTTTCCAGCCGGAACCGCGCGGTTATGTCACGATACTGGGCACCTGCAATGGTCTGGTATTTGTAGCTGTTGATGATAAATTGTTTTATATCTGGAACCCATGCATTGGATTCTTCAATCAATTACCTGATCCAGGTTTTCCCTTAGATGATAATGCGCTACACTATTATGGTGTTGGCTATTTGTCCGCCACCGATGACTACAAAGTTTTGGTAGCCCCCTATCGCATTCGTGAAGGGGAGAAAGAGGTCGAGATGTTCTCATCGACAACTCACATATGGCAGAGGATTGAATCCCCTCGCCTGCGCATAACTGAAGAACTCGATCCTCAGGGTGCTCTTTCGAATGATGCACTTCATTGGCTAAAATACGATGAGGAGGAGGAGCATGAAATAGTTTCTTTTGACTTGGAAGAGGAGGTGTTCCGGAGAATGCCACTGCCTAATTTCGATCATGATGGTAAGACTTTCTGCAAGCTTGGGGTTTATGGAGGGTGCCTGTGTGTATCGCGTTATCCGGTTGGTGTTTGGGACCCTATTGATTTCTGGGTCATGAGAGAATATGGCGTCAGTGGCTCATGGATTATGCTCTTTACCTTAAAGCTCTCCCATCCGCCTGAGTTTCCCTTGGCTTCCAGAGAATTCTTGGTTGTGGAAAGTTGTACAATTGCCGCGAATTGGACCGGCGAGGGGTTCGAGTTGATAAGGATTGATCATAAAGAAGACGAGAAGCCTGGGCGGTATATGCATAAGGGGGTTTACATGTGTATGGTTGAATATGAAGAGAGTACTAGCATATCTCTCAGTCAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

366

Amino Acids

42.15

Weight (kDa)

5.02

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 43 2e-08 F-box domain
F-box-like PF12937 6 - 41 3.4e-06 F-box-like
FBA_3 PF08268 101 - 283 1.4e-13 F-box associated beta propeller domain
FBA_1 PF07734 105 - 318 1.9e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17540 FvH4_1g17550 FvH4_1g17560 FvH4_1g17570 FvH4_1g17570 FvH4_1g17570 FvH4_1g17581 FvH4_1g18380 FvH4_1g18391 FvH4_1g18430 FvH4_1g18470 FvH4_1g18480 FvH4_1g18480 FvH4_1g18480 FvH4_1g18870 FvH4_2g36701 FvH4_2g36701 FvH4_2g36710 FvH4_2g36711 FvH4_3g01100 FvH4_3g01100 FvH4_3g14940 FvH4_3g14941 FvH4_3g14950 FvH4_3g14952 FvH4_3g14954 FvH4_3g14954 FvH4_3g14954 FvH4_3g15782 FvH4_3g32340 FvH4_3g32350 FvH4_3g32390 FvH4_3g32390 FvH4_3g44560 FvH4_3g44581 FvH4_3g44650 FvH4_3g44660 FvH4_3g44671 FvH4_3g45110 FvH4_3g45120 FvH4_3g45161 FvH4_4g30361 FvH4_6g14790 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14900 FvH4_6g14972 FvH4_6g14980 FvH4_6g14980 FvH4_6g14981 FvH4_6g14990 FvH4_6g14991 FvH4_6g14991 FvH4_6g14993 FvH4_6g14993 FvH4_6g14994 FvH4_6g15010 FvH4_6g19961
malus_domestica MD09G1138900.v1.1
prunus_persica Prupe.6G214500_v2.0.a1 Prupe.6G214600_v2.0.a1 Prupe.6G214700_v2.0.a1 Prupe.6G214900_v2.0.a1 Prupe.6G215100_v2.0.a1 Prupe.7G008100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321661 RchiOBHm_Chr1g0378141 RchiOBHm_Chr2g0101031 RchiOBHm_Chr2g0107781 RchiOBHm_Chr2g0107801 RchiOBHm_Chr2g0107811 RchiOBHm_Chr2g0107821 RchiOBHm_Chr2g0107841 RchiOBHm_Chr2g0107851 RchiOBHm_Chr2g0107881 RchiOBHm_Chr2g0107891 RchiOBHm_Chr2g0109731 RchiOBHm_Chr2g0109761 RchiOBHm_Chr2g0109771 RchiOBHm_Chr2g0109781 RchiOBHm_Chr3g0468171 RchiOBHm_Chr3g0468191 RchiOBHm_Chr3g0475411 RchiOBHm_Chr5g0007501 RchiOBHm_Chr5g0024531 RchiOBHm_Chr5g0053901 RchiOBHm_Chr5g0059111 RchiOBHm_Chr5g0059201 RchiOBHm_Chr5g0059211 RchiOBHm_Chr5g0059291 RchiOBHm_Chr5g0059301 RchiOBHm_Chr5g0059321 RchiOBHm_Chr5g0059551 RchiOBHm_Chr5g0081341 RchiOBHm_Chr7g0211081
rosa_laevigata RLG00000003023 RLG00000017039 RLG00000017135 RLG00000017616 RLG00000017620 RLG00000017621 RLG00000017622 RLG00000017623 RLG00000017624 RLG00000017625 RLG00000017762 RLG00000017763 RLG00000017764 RLG00000017765 RLG00000024443 RLG00000026103 RLG00000031462 RLG00000035283 RLG00000036923 RLG00000036924 RLG00000036925
rosa_multiflora Rmu_co7981142.1_g000001 Rmu_co8037462.1_g000001 Rmu_co8043938.1_g000001 Rmu_co8085092.1_g000001 Rmu_co8243479.1_g000002 Rmu_co8254857.1_g000001 Rmu_co8270991.1_g000001 Rmu_co8304467.1_g000001 Rmu_co8322247.1_g000001 Rmu_sc0000186.1_g000008 Rmu_sc0000375.1_g000022 Rmu_sc0000625.1_g000006 Rmu_sc0001465.1_g000001 Rmu_sc0001484.1_g000034 Rmu_sc0001484.1_g000035 Rmu_sc0001484.1_g000036 Rmu_sc0001484.1_g000038 Rmu_sc0001484.1_g000041 Rmu_sc0001484.1_g000042 Rmu_sc0001793.1_g000054 Rmu_sc0001810.1_g000002 Rmu_sc0001810.1_g000003 Rmu_sc0001810.1_g000004 Rmu_sc0001862.1_g000003 Rmu_sc0002076.1_g000008 Rmu_sc0002076.1_g000009 Rmu_sc0002983.1_g000017 Rmu_sc0002983.1_g000035 Rmu_sc0002983.1_g000038 Rmu_sc0003121.1_g000002 Rmu_sc0003121.1_g000005 Rmu_sc0003121.1_g000006 Rmu_sc0003121.1_g000007 Rmu_sc0003659.1_g000007 Rmu_sc0004524.1_g000009 Rmu_sc0004524.1_g000010 Rmu_sc0004524.1_g000012 Rmu_sc0004650.1_g000003 Rmu_sc0006215.1_g000003 Rmu_sc0006889.1_g000020 Rmu_sc0006889.1_g000030 Rmu_sc0006959.1_g000021 Rmu_sc0007173.1_g000008 Rmu_sc0007698.1_g000019 Rmu_sc0007768.1_g000009 Rmu_sc0008992.1_g000002 Rmu_sc0008992.1_g000004 Rmu_sc0009575.1_g000001 Rmu_sc0009575.1_g000008 Rmu_sc0009650.1_g000002 Rmu_sc0009650.1_g000005 Rmu_sc0009650.1_g000009 Rmu_sc0012421.1_g000005 Rmu_sc0012471.1_g000023 Rmu_sc0012471.1_g000025 Rmu_sc0012670.1_g000002 Rmu_sc0012670.1_g000003 Rmu_sc0016637.1_g000005 Rmu_sc0018174.1_g000002 Rmu_sc0031424.1_g000001 Rmu_ssc0000182.1_g000007 Rmu_ssc0000182.1_g000010 Rmu_ssc0000432.1_g000029 Rmu_ssc0000432.1_g000035 Rmu_ssc0000432.1_g000036 Rmu_ssc0000432.1_g000042
rosa_roxburghii Rroxscaffold_153G00436690 Rroxscaffold_1G00002200 Rroxscaffold_1G00002220 Rroxscaffold_1G00021160 Rroxscaffold_1G00021240 Rroxscaffold_1G00021310 Rroxscaffold_1G00025950 Rroxscaffold_1G00026710 Rroxscaffold_1G00054720 Rroxscaffold_2G00104770 Rroxscaffold_2G00104780 Rroxscaffold_2G00133820 Rroxscaffold_2G00133950 Rroxscaffold_2G00133970 Rroxscaffold_2G00133980 Rroxscaffold_2G00133990 Rroxscaffold_2G00135690 Rroxscaffold_2G00135820 Rroxscaffold_2G00135850 Rroxscaffold_2G00135860 Rroxscaffold_2G00135890 Rroxscaffold_2G00135910 Rroxscaffold_2G00135920 Rroxscaffold_2G00135930 Rroxscaffold_2G00135940 Rroxscaffold_2G00141620 Rroxscaffold_3G00248120 Rroxscaffold_4G00277310 Rroxscaffold_6G00406330 Rroxscaffold_6G00412930 Rroxscaffold_6G00412940 Rroxscaffold_6G00412950 Rroxscaffold_6G00412970 Rroxscaffold_6G00413290
rosa_rugosa Rorug01G0019000 Rorug02G0095500 Rorug02G0095600 Rorug02G0095700 Rorug02G0095800 Rorug02G0095900 Rorug02G0096000 Rorug02G0096100 Rorug02G0096200 Rorug02G0147500 Rorug02G0147600 Rorug02G0147700 Rorug02G0147800 Rorug02G0148100 Rorug02G0148300 Rorug02G0148400 Rorug02G0148500 Rorug02G0148600 Rorug02G0149800 Rorug02G0162500 Rorug02G0162600 Rorug02G0162700 Rorug02G0162800 Rorug02G0510300 Rorug03G0090600 Rorug03G0093700 Rorug03G0093800 Rorug03G0093900 Rorug03G0094000 Rorug03G0148600 Rorug04G0427700 Rorug05G0083700 Rorug05G0321200 Rorug05G0321300 Rorug05G0321400 Rorug05G0321500 Rorug05G0321600 Rorug05G0321900 Rorug05G0322000 Rorug05G0322000 Rorug05G0322300 Rorug05G0475400 Rorug05G0475500 Rorug05G0475600.1 Rorug05G0475700 Rorug05G0475900
rosa_samantha Rh1DG457400 Rh2AG197800 Rh2AG208800 Rh5AG386200 Rh5BG397600 Rh5DG174500 Rh5DG381100 Rh5DG414700 Rh5DG414800 Rh5DG415500 Rh5DG415800
rosa_wichuraiana Rw0G010830 Rw0G010840 Rw0G010870 Rw0G015860 Rw0G015870 Rw1G037410 Rw1G040530 Rw2G011200 Rw2G011230 Rw2G015590 Rw2G015600 Rw2G015610 Rw2G015630 Rw2G015640 Rw2G015660 Rw2G015680 Rw2G015690 Rw3G013400 Rw3G013410 Rw3G018040 Rw5G036340 Rw5G036390 Rw5G049010 Rw5G049020 Rw5G049030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 338
Acc16I TGCGCA 1 cut(s) 593
Acc36I ACCTGC 1 cut(s) 338
AccB1I GGYRCC 2 cut(s) 326, 780
AccB7I CCANNNNNTGG 1 cut(s) 392
AccII CGCG 4 cut(s) 304, 306, 796, 959
AccIII TCCGGA 1 cut(s) 711
AciI CCGC 8 cut(s) 5, 178, 302, 306, 474, 899, 957, 1024
AclWI GGATC 3 cut(s) 116, 410, 605
AcsI RAATTY 2 cut(s) 128, 926
AcuI CTGAAG 1 cut(s) 621
AcyI GRCGYC 2 cut(s) 201, 852
AfaI GTAC 2 cut(s) 949, 1075
AfiI CCNNNNNNNGG 5 cut(s) 251, 392, 419, 963, 975
AflIII ACRYGT 1 cut(s) 1047
AgsI TTSAA 3 cut(s) 403, 578, 1061
AhdI GACNNNNNGTC 1 cut(s) 188
AjnI CCWGG 2 cut(s) 418, 1018
AluBI AGCT 5 cut(s) 155, 282, 353, 763, 889
AluI AGCT 5 cut(s) 155, 282, 353, 763, 889
Alw21I GWGCWC 1 cut(s) 625
AlwI GGATC 3 cut(s) 116, 410, 605
Aor13HI TCCGGA 1 cut(s) 711
ApeKI GCWGC 1 cut(s) 152
ApoI RAATTY 2 cut(s) 128, 926
AspLEI GCGC 3 cut(s) 306, 445, 594
AspS9I GGNCC 2 cut(s) 817, 966
AsuHPI GGTGA 2 cut(s) 73, 187
AsuII TTCGAA 2 cut(s) 92, 629
AvaII GGWCC 2 cut(s) 817, 966
AxyI CCTNAGG 1 cut(s) 615
BaeGI GKGCMC 1 cut(s) 329
BanI GGYRCC 2 cut(s) 326, 780
BbsI GAAGAC 2 cut(s) 184, 1014
Bbv12I GWGCWC 1 cut(s) 625
BbvCI CCTCAGC 1 cut(s) 173
BbvI GCAGC 1 cut(s) 164
BccI CCATC 2 cut(s) 737, 903
BceAI ACGGC 1 cut(s) 229
BcgI CGANNNNNNTGC 4 cut(s) 82, 116, 169, 203
BciT130I CCWGG 2 cut(s) 420, 1020
BclI TGATCA 1 cut(s) 997
BfaI CTAG 1 cut(s) 1077
BfuAI ACCTGC 1 cut(s) 338
BisI GCNGC 3 cut(s) 153, 178, 957
BlsI GCNGC 3 cut(s) 154, 179, 958
BmcAI AGTACT 1 cut(s) 1075
Bme1390I CCNGG 2 cut(s) 420, 1020
Bme18I GGWCC 2 cut(s) 817, 966
BmeRI GACNNNNNGTC 1 cut(s) 188
BmgT120I GGNCC 2 cut(s) 817, 966
BmiI GGNNCC 6 cut(s) 300, 328, 383, 782, 818, 819
BmrFI CCNGG 2 cut(s) 420, 1020
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 1 cut(s) 625
BmuI ACTGGG 1 cut(s) 332
BpiI GAAGAC 2 cut(s) 184, 1014
BplI GAGNNNNNCTC 2 cut(s) 530, 562
Bpu10I CCTNAGC 1 cut(s) 173
Bpu14I TTCGAA 2 cut(s) 92, 629
BpuEI CTTGAG 1 cut(s) 47
BsaHI GRCGYC 2 cut(s) 201, 852
BsaJI CCNNGG 2 cut(s) 912, 1019
BsaWI WCCGGW 3 cut(s) 22, 711, 802
Bsc4I CCNNNNNNNGG 5 cut(s) 251, 392, 419, 963, 975
Bse118I RCCGGY 1 cut(s) 968
Bse1I ACTGG 1 cut(s) 327
Bse21I CCTNAGG 1 cut(s) 615
Bse3DI GCAATG 1 cut(s) 340
BseAI TCCGGA 1 cut(s) 711
BseBI CCWGG 2 cut(s) 420, 1020
BseDI CCNNGG 2 cut(s) 912, 1019
BseGI GGATG 2 cut(s) 241, 895
BseLI CCNNNNNNNGG 5 cut(s) 251, 392, 419, 963, 975
BseMI GCAATG 1 cut(s) 340
BseMII CTCAG 3 cut(s) 187, 629, 894
BseNI ACTGG 1 cut(s) 327
BseRI GAGGAG 5 cut(s) 176, 677, 680, 683, 716
BseSI GKGCMC 1 cut(s) 329
BseXI GCAGC 1 cut(s) 164
BseYI CCCAGC 1 cut(s) 278
Bsh1236I CGCG 4 cut(s) 304, 306, 796, 959
BshNI GGYRCC 2 cut(s) 326, 780
BsiHKAI GWGCWC 1 cut(s) 625
BsiSI CCGG 5 cut(s) 23, 296, 712, 803, 969
BslFI GGGAC 1 cut(s) 830
BslI CCNNNNNNNGG 5 cut(s) 251, 392, 419, 963, 975
BsmFI GGGAC 1 cut(s) 830
BsmI GAATGC 2 cut(s) 513, 723
Bsp119I TTCGAA 2 cut(s) 92, 629
Bsp1286I GDGCHC 2 cut(s) 329, 625
Bsp13I TCCGGA 1 cut(s) 711
Bsp1407I TGTACA 1 cut(s) 947
Bsp143I GATC 5 cut(s) 121, 415, 610, 736, 997
BspACI CCGC 8 cut(s) 5, 178, 302, 306, 474, 899, 957, 1024
BspCNI CTCAG 4 cut(s) 186, 628, 895, 1101
BspEI TCCGGA 1 cut(s) 711
BspFNI CGCG 4 cut(s) 304, 306, 796, 959
BspHI TCATGA 2 cut(s) 739, 837
BspLI GGNNCC 6 cut(s) 300, 328, 383, 782, 818, 819
BspMI ACCTGC 1 cut(s) 338
BspPI GGATC 3 cut(s) 116, 410, 605
BspT104I TTCGAA 2 cut(s) 92, 629
BspT107I GGYRCC 2 cut(s) 326, 780
BsrDI GCAATG 1 cut(s) 340
BsrFI RCCGGY 1 cut(s) 968
BsrGI TGTACA 1 cut(s) 947
BsrI ACTGG 1 cut(s) 327
BssAI RCCGGY 1 cut(s) 968
BssECI CCNNGG 2 cut(s) 912, 1019
BssMI GATC 5 cut(s) 121, 415, 610, 736, 997
BssNI GRCGYC 2 cut(s) 201, 852
BssT1I CCWWGG 1 cut(s) 912
Bst2UI CCWGG 2 cut(s) 420, 1020
Bst4CI ACNGT 1 cut(s) 13
Bst6I CTCTTC 3 cut(s) 21, 693, 1062
BstACI GRCGYC 2 cut(s) 201, 852
BstAUI TGTACA 1 cut(s) 947
BstBI TTCGAA 2 cut(s) 92, 629
BstC8I GCNNGC 2 cut(s) 590, 761
BstDEI CTNAG 5 cut(s) 173, 430, 615, 903, 1088
BstENI CCTNNNNNAGG 1 cut(s) 417
BstF5I GGATG 2 cut(s) 241, 895
BstFNI CGCG 4 cut(s) 304, 306, 796, 959
BstHHI GCGC 3 cut(s) 306, 445, 594
BstKTI GATC 5 cut(s) 124, 418, 613, 739, 1000
BstMBI GATC 5 cut(s) 121, 415, 610, 736, 997
BstMWI GCNNNNNNNGC 3 cut(s) 301, 858, 1030
BstNI CCWGG 2 cut(s) 420, 1020
BstNSI RCATGY 1 cut(s) 1051
BstSCI CCNGG 2 cut(s) 418, 1018
BstSLI GKGCMC 1 cut(s) 329
BstUI CGCG 4 cut(s) 304, 306, 796, 959
BstV1I GCAGC 1 cut(s) 164
BstV2I GAAGAC 2 cut(s) 184, 1014
BstXI CCANNNNNNTGG 1 cut(s) 232
Bsu36I CCTNAGG 1 cut(s) 615
BtsCI GGATG 2 cut(s) 241, 895
BtsI GCAGTG 1 cut(s) 722
BtsIMutI CAGTG 2 cut(s) 722, 862
BveI ACCTGC 1 cut(s) 338
Cac8I GCNNGC 2 cut(s) 590, 761
CciI TCATGA 2 cut(s) 739, 837
CfoI GCGC 3 cut(s) 306, 445, 594
Cfr10I RCCGGY 1 cut(s) 968
Cfr13I GGNCC 2 cut(s) 817, 966
CseI GACGC 2 cut(s) 209, 841
Csp6I GTAC 2 cut(s) 948, 1074
CviAII CATG 6 cut(s) 387, 674, 740, 838, 864, 1048
CviQI GTAC 2 cut(s) 948, 1074
DdeI CTNAG 5 cut(s) 173, 430, 615, 903, 1088
DpnI GATC 5 cut(s) 123, 417, 612, 738, 999
DpnII GATC 5 cut(s) 121, 415, 610, 736, 997
DriI GACNNNNNGTC 1 cut(s) 188
Eam1104I CTCTTC 3 cut(s) 21, 693, 1062
Eam1105I GACNNNNNGTC 1 cut(s) 188
EarI CTCTTC 3 cut(s) 21, 693, 1062
EciI GGCGGA 3 cut(s) 20, 463, 888
Eco130I CCWWGG 1 cut(s) 912
Eco47I GGWCC 2 cut(s) 817, 966
Eco57I CTGAAG 1 cut(s) 621
Eco81I CCTNAGG 1 cut(s) 615
EcoNI CCTNNNNNAGG 1 cut(s) 417
EcoO109I RGGNCCY 1 cut(s) 817
EcoRI GAATTC 1 cut(s) 926
EcoRII CCWGG 2 cut(s) 418, 1018
EcoT14I CCWWGG 1 cut(s) 912
EcoT22I ATGCAT 2 cut(s) 392, 1035
ErhI CCWWGG 1 cut(s) 912
FaeI CATG 6 cut(s) 390, 677, 743, 841, 867, 1051
FalI AAGNNNNNCTT 2 cut(s) 266, 298
FaqI GGGAC 1 cut(s) 830
FatI CATG 6 cut(s) 386, 673, 739, 837, 863, 1047
FauNDI CATATG 2 cut(s) 99, 563
FbaI TGATCA 1 cut(s) 997
Fnu4HI GCNGC 3 cut(s) 153, 178, 957
FokI GGATG 2 cut(s) 248, 882
Fsp4HI GCNGC 3 cut(s) 153, 178, 957
FspBI CTAG 1 cut(s) 1077
FspI TGCGCA 1 cut(s) 593
GlaI GCGC 3 cut(s) 305, 444, 593
GluI GCNGC 3 cut(s) 153, 178, 957
GsaI CCCAGC 1 cut(s) 282
HapII CCGG 5 cut(s) 23, 296, 712, 803, 969
HgaI GACGC 2 cut(s) 209, 841
HhaI GCGC 3 cut(s) 306, 445, 594
Hin1I GRCGYC 2 cut(s) 201, 852
Hin1II CATG 6 cut(s) 390, 677, 743, 841, 867, 1051
Hin6I GCGC 3 cut(s) 304, 443, 592
HinP1I GCGC 3 cut(s) 304, 443, 592
HindIII AAGCTT 1 cut(s) 761
HinfI GANTC 5 cut(s) 78, 183, 221, 396, 578
HpaII CCGG 5 cut(s) 23, 296, 712, 803, 969
HphI GGTGA 2 cut(s) 73, 187
Hpy166II GTNNAC 2 cut(s) 16, 1045
Hpy188I TCNGA 2 cut(s) 77, 121
Hpy188III TCNNGA 8 cut(s) 316, 379, 518, 538, 712, 740, 838, 921
Hpy8I GTNNAC 2 cut(s) 16, 1045
Hpy99I CGWCG 2 cut(s) 203, 250
HpyAV CCTTC 2 cut(s) 270, 515
HpyCH4III ACNGT 1 cut(s) 13
HpyCH4V TGCA 5 cut(s) 333, 390, 638, 759, 1033
HpyF10VI GCNNNNNNNGC 3 cut(s) 301, 858, 1030
HpyF3I CTNAG 5 cut(s) 173, 430, 615, 903, 1088
Hsp92I GRCGYC 2 cut(s) 201, 852
Hsp92II CATG 6 cut(s) 390, 677, 743, 841, 867, 1051
HspAI GCGC 3 cut(s) 304, 443, 592
KflI GGGWCCC 1 cut(s) 817
Kpn2I TCCGGA 1 cut(s) 711
Ksp22I TGATCA 1 cut(s) 997
Kzo9I GATC 5 cut(s) 121, 415, 610, 736, 997
LmnI GCTCC 1 cut(s) 670
Lsp1109I GCAGC 1 cut(s) 164
LweI GCATC 1 cut(s) 625
MaeI CTAG 1 cut(s) 1077
MaeIII GTNAC 1 cut(s) 313
MalI GATC 5 cut(s) 123, 417, 612, 738, 999
MboI GATC 5 cut(s) 121, 415, 610, 736, 997
MboII GAAGA 7 cut(s) 38, 184, 391, 614, 710, 1019, 1079
MfeI CAATTG 1 cut(s) 951
MhlI GDGCHC 2 cut(s) 329, 625
MluCI AATT 7 cut(s) 128, 365, 407, 730, 926, 951, 961
MlyI GAGTC 1 cut(s) 177
Mph1103I ATGCAT 2 cut(s) 392, 1035
MroI TCCGGA 1 cut(s) 711
MseI TTAA 3 cut(s) 71, 147, 884
MslI CAYNNNNRTG 3 cut(s) 234, 453, 1052
MspI CCGG 5 cut(s) 23, 296, 712, 803, 969
MspR9I CCNGG 2 cut(s) 420, 1020
MunI CAATTG 1 cut(s) 951
Mva1269I GAATGC 2 cut(s) 513, 723
MvaI CCWGG 2 cut(s) 420, 1020
MvnI CGCG 4 cut(s) 304, 306, 796, 959
MwoI GCNNNNNNNGC 3 cut(s) 301, 858, 1030
NdeI CATATG 2 cut(s) 99, 563
NdeII GATC 5 cut(s) 121, 415, 610, 736, 997
NlaIII CATG 6 cut(s) 390, 677, 743, 841, 867, 1051
NlaIV GGNNCC 6 cut(s) 300, 328, 383, 782, 818, 819
NmuCI GTSAC 1 cut(s) 313
NsbI TGCGCA 1 cut(s) 593
NsiI ATGCAT 2 cut(s) 392, 1035
NspI RCATGY 1 cut(s) 1051
NspV TTCGAA 2 cut(s) 92, 629
PagI TCATGA 2 cut(s) 739, 837
PaqCI CACCTGC 1 cut(s) 338
PciI ACATGT 1 cut(s) 1047
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PctI GAATGC 2 cut(s) 513, 723
PfeI GAWTC 4 cut(s) 78, 221, 396, 578
PflMI CCANNNNNTGG 1 cut(s) 392
PkrI GCNGC 3 cut(s) 154, 179, 958
PleI GAGTC 1 cut(s) 177
PpsI GAGTC 1 cut(s) 177
PpuMI RGGWCCY 1 cut(s) 817
PscI ACATGT 1 cut(s) 1047
Psp5II RGGWCCY 1 cut(s) 817
Psp6I CCWGG 2 cut(s) 418, 1018
PspFI CCCAGC 1 cut(s) 278
PspGI CCWGG 2 cut(s) 418, 1018
PspN4I GGNNCC 6 cut(s) 300, 328, 383, 782, 818, 819
PspPI GGNCC 2 cut(s) 817, 966
PspPPI RGGWCCY 1 cut(s) 817
RsaI GTAC 2 cut(s) 949, 1075
RsaNI GTAC 2 cut(s) 948, 1074
RseI CAYNNNNRTG 3 cut(s) 234, 453, 1052
SaqAI TTAA 3 cut(s) 71, 147, 884
SatI GCNGC 3 cut(s) 153, 178, 957
Sau3AI GATC 5 cut(s) 121, 415, 610, 736, 997
Sau96I GGNCC 2 cut(s) 817, 966
ScaI AGTACT 1 cut(s) 1075
SchI GAGTC 1 cut(s) 177
ScrFI CCNGG 2 cut(s) 420, 1020
SduI GDGCHC 2 cut(s) 329, 625
SfaNI GCATC 1 cut(s) 625
SfuI TTCGAA 2 cut(s) 92, 629
SinI GGWCC 2 cut(s) 817, 966
SmiMI CAYNNNNRTG 3 cut(s) 234, 453, 1052
SmlI CTYRAG 1 cut(s) 62
SmoI CTYRAG 1 cut(s) 62
Sse9I AATT 7 cut(s) 128, 365, 407, 730, 926, 951, 961
SsiI CCGC 8 cut(s) 5, 178, 302, 306, 474, 899, 957, 1024
SspMI CTAG 1 cut(s) 1077
StyD4I CCNGG 2 cut(s) 418, 1018
StyI CCWWGG 1 cut(s) 912
TaaI ACNGT 1 cut(s) 13
TaqI TCGA 9 cut(s) 92, 213, 219, 537, 551, 609, 629, 735, 981
TasI AATT 7 cut(s) 128, 365, 407, 730, 926, 951, 961
TatI WGTACW 2 cut(s) 947, 1073
TauI GCSGC 2 cut(s) 180, 959
TfiI GAWTC 4 cut(s) 78, 221, 396, 578
Tru1I TTAA 3 cut(s) 71, 147, 884
Tru9I TTAA 3 cut(s) 71, 147, 884
TscAI CASTG 2 cut(s) 729, 862
TseFI GTSAC 1 cut(s) 313
TseI GCWGC 1 cut(s) 152
Tsp45I GTSAC 1 cut(s) 313
TspDTI ATGAA 3 cut(s) 632, 690, 1080
TspGWI ACGGA 1 cut(s) 76
TspRI CASTG 2 cut(s) 729, 862
Van91I CCANNNNNTGG 1 cut(s) 392
VpaK11BI GGWCC 2 cut(s) 817, 966
XagI CCTNNNNNAGG 1 cut(s) 417
XapI RAATTY 2 cut(s) 128, 926
XceI RCATGY 1 cut(s) 1051
XcmI CCANNNNNNNNNTGG 1 cut(s) 928
XspI CTAG 1 cut(s) 1077
ZrmI AGTACT 1 cut(s) 1075
Zsp2I ATGCAT 2 cut(s) 392, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.